Receptor
PDB id Resolution Class Description Source Keywords
4EAX 2.3 Å NON-ENZYME: OTHER MOUSE NGF IN COMPLEX WITH LYSO-PS MUS MUSCULUS LYSO-PS PHOSPHOLIPID HORMONE
Ref.: STRUCTURAL AND FUNCTIONAL INSIGHTS INTO LIPID-BOUND GROWTH FACTORS FASEB J. V. 26 3811 2012
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
S12 B:201;
D:201;
Valid;
Valid;
none;
none;
submit data
523.597 C24 H46 N O9 P CCCCC...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4EAX 2.3 Å NON-ENZYME: OTHER MOUSE NGF IN COMPLEX WITH LYSO-PS MUS MUSCULUS LYSO-PS PHOSPHOLIPID HORMONE
Ref.: STRUCTURAL AND FUNCTIONAL INSIGHTS INTO LIPID-BOUND GROWTH FACTORS FASEB J. V. 26 3811 2012
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 4EAX - S12 C24 H46 N O9 P CCCCCCCCC=....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 4EAX - S12 C24 H46 N O9 P CCCCCCCCC=....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 4EAX - S12 C24 H46 N O9 P CCCCCCCCC=....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: S12; Similar ligands found: 72
No: Ligand ECFP6 Tc MDL keys Tc
1 S12 1 1
2 42H 0.701299 0.766667
3 NKP 0.7 0.823529
4 P5S 0.615385 0.960784
5 PGW 0.60241 0.826923
6 D3D 0.60241 0.826923
7 PGV 0.595238 0.826923
8 DR9 0.595238 0.826923
9 P6L 0.588235 0.826923
10 LPC 0.584416 0.75
11 LAP 0.584416 0.75
12 LP3 0.584416 0.75
13 OZ2 0.581395 0.826923
14 OLB 0.577465 0.627451
15 OLC 0.577465 0.627451
16 NKO 0.571429 0.803922
17 NKN 0.571429 0.803922
18 P50 0.563218 0.960784
19 MVC 0.555556 0.627451
20 L9Q 0.552941 0.888889
21 LOP 0.552941 0.888889
22 6OU 0.552941 0.888889
23 CD4 0.544304 0.803922
24 78N 0.541667 0.627451
25 78M 0.541667 0.627451
26 ZPE 0.54023 0.888889
27 LPS 0.538462 0.960784
28 PSF 0.525 0.960784
29 PCW 0.516854 0.733333
30 D21 0.512195 0.788462
31 CN6 0.505882 0.803922
32 PGM 0.5 0.788462
33 CN3 0.494253 0.803922
34 LHG 0.493976 0.807692
35 PGT 0.493976 0.807692
36 GP7 0.489362 0.888889
37 B7N 0.473118 0.736842
38 PEK 0.468085 0.888889
39 P3A 0.468085 0.792453
40 CN5 0.464286 0.788462
41 PSC 0.463918 0.733333
42 GYM 0.450704 0.607843
43 1QW 0.450704 0.607843
44 PEH 0.447059 0.87037
45 PEV 0.447059 0.87037
46 PTY 0.447059 0.87037
47 PEF 0.447059 0.87037
48 8PE 0.447059 0.87037
49 GSE 0.442857 0.784314
50 9PE 0.44186 0.87037
51 PGK 0.43617 0.763636
52 EPH 0.427184 0.888889
53 PEE 0.425287 0.854545
54 PIE 0.42268 0.689655
55 DGG 0.42268 0.763636
56 OPC 0.42268 0.721311
57 L9R 0.416667 0.694915
58 POV 0.416667 0.694915
59 6PL 0.41573 0.716667
60 PC7 0.41573 0.716667
61 HGX 0.41573 0.716667
62 HGP 0.41573 0.716667
63 PLD 0.41573 0.716667
64 LIO 0.41573 0.716667
65 PX8 0.414634 0.75
66 PX2 0.414634 0.75
67 44G 0.411765 0.807692
68 3PH 0.402439 0.769231
69 F57 0.402439 0.769231
70 6PH 0.402439 0.769231
71 LPP 0.402439 0.769231
72 7PH 0.402439 0.769231
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4EAX; Ligand: S12; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4eax.bio2) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 4EAX; Ligand: S12; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 4eax.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
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