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Receptor
PDB id Resolution Class Description Source Keywords
3QX9 2 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF MID DOMAIN FROM HAGO2 IN COMPLEX WITH A HOMO SAPIENS ROSSMANN-LIKE FOLD RNA BINDING PROTEIN
Ref.: STRUCTURAL ANALYSIS OF 5'-MRNA-CAP INTERACTIONS WIT HUMAN AGO2 MID DOMAIN. EMBO REP. V. 12 415 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ATP A:1;
B:1;
C:1;
Valid;
Valid;
Valid;
none;
none;
none;
Kd = 0.09 mM
507.181 C10 H16 N5 O13 P3 c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3QX9 2 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF MID DOMAIN FROM HAGO2 IN COMPLEX WITH A HOMO SAPIENS ROSSMANN-LIKE FOLD RNA BINDING PROTEIN
Ref.: STRUCTURAL ANALYSIS OF 5'-MRNA-CAP INTERACTIONS WIT HUMAN AGO2 MID DOMAIN. EMBO REP. V. 12 415 2011
Members (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 3LUH Kd = 3.3 mM 5GP C10 H14 N5 O8 P c1nc2c(n1[....
2 3LUD Kd = 0.26 mM AMP C10 H14 N5 O7 P c1nc(c2c(n....
3 3LUJ Kd = 0.12 mM U5P C9 H13 N2 O9 P C1=CN(C(=O....
4 3QX8 Kd = 1.37 mM GTG C21 H30 N10 O18 P3 C[n+]1cn(c....
5 3LUG Kd = 3.6 mM C5P C9 H14 N3 O8 P C1=CN(C(=O....
6 3QX9 Kd = 0.09 mM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
70% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 3LUH Kd = 3.3 mM 5GP C10 H14 N5 O8 P c1nc2c(n1[....
2 3LUD Kd = 0.26 mM AMP C10 H14 N5 O7 P c1nc(c2c(n....
3 3LUJ Kd = 0.12 mM U5P C9 H13 N2 O9 P C1=CN(C(=O....
4 3QX8 Kd = 1.37 mM GTG C21 H30 N10 O18 P3 C[n+]1cn(c....
5 3LUG Kd = 3.6 mM C5P C9 H14 N3 O8 P C1=CN(C(=O....
6 3QX9 Kd = 0.09 mM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
50% Homology Family (10)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 3LUH Kd = 3.3 mM 5GP C10 H14 N5 O8 P c1nc2c(n1[....
2 3LUD Kd = 0.26 mM AMP C10 H14 N5 O7 P c1nc(c2c(n....
3 3LUJ Kd = 0.12 mM U5P C9 H13 N2 O9 P C1=CN(C(=O....
4 3QX8 Kd = 1.37 mM GTG C21 H30 N10 O18 P3 C[n+]1cn(c....
5 3LUG Kd = 3.6 mM C5P C9 H14 N3 O8 P C1=CN(C(=O....
6 3QX9 Kd = 0.09 mM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
7 4G0Q Kd = 3 mM C5P C9 H14 N3 O8 P C1=CN(C(=O....
8 4G0Y Kd = 4.99 mM AMP C10 H14 N5 O7 P c1nc(c2c(n....
9 4G0P Kd = 0.98 mM U5P C9 H13 N2 O9 P C1=CN(C(=O....
10 4G0Z Kd = 6.13 mM 5GP C10 H14 N5 O8 P c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ATP; Similar ligands found: 422
No: Ligand ECFP6 Tc MDL keys Tc
1 HEJ 1 1
2 ATP 1 1
3 5FA 0.985507 1
4 AQP 0.985507 1
5 AP5 0.927536 0.971831
6 B4P 0.927536 0.971831
7 BA3 0.913043 0.971831
8 ADP 0.9 1
9 A2D 0.884058 0.971831
10 AGS 0.84 0.945946
11 SAP 0.84 0.945946
12 6YZ 0.833333 0.972222
13 AT4 0.810811 0.958904
14 AN2 0.810811 0.985915
15 25L 0.809524 0.985915
16 AR6 0.802632 0.971831
17 APR 0.802632 0.971831
18 M33 0.8 0.958333
19 ACQ 0.794872 0.972222
20 TAT 0.794872 0.958904
21 T99 0.794872 0.958904
22 AD9 0.792208 0.972222
23 ACP 0.789474 0.972222
24 AMP 0.788732 0.971429
25 A 0.788732 0.971429
26 ANP 0.772152 0.972222
27 CA0 0.753247 0.945205
28 ADX 0.753247 0.873418
29 A22 0.746988 0.985915
30 50T 0.74359 0.958333
31 PRX 0.734177 0.893333
32 APC 0.734177 0.958904
33 ABM 0.733333 0.917808
34 ATF 0.731707 0.958904
35 ITT 0.730769 0.943662
36 7D4 0.730769 0.905405
37 ADQ 0.729412 0.945205
38 A3R 0.729412 0.907895
39 AP2 0.714286 0.958904
40 A12 0.714286 0.958904
41 A1R 0.709302 0.907895
42 SRA 0.706667 0.918919
43 5AL 0.698795 0.931507
44 HFD 0.695122 0.945946
45 9X8 0.693182 0.92
46 OAD 0.693182 0.945205
47 AU1 0.6875 0.972222
48 SRP 0.682353 0.906667
49 G5P 0.680851 0.921053
50 25A 0.678161 0.971831
51 3OD 0.677778 0.945205
52 4AD 0.670455 0.92
53 G3A 0.670213 0.921053
54 00A 0.662921 0.883117
55 RBY 0.662651 0.932432
56 ADP PO3 0.662651 0.943662
57 ADV 0.662651 0.932432
58 BIS 0.659341 0.933333
59 8QN 0.659091 0.931507
60 5SV 0.659091 0.848101
61 OOB 0.659091 0.931507
62 GTA 0.65625 0.886076
63 UP5 0.653061 0.92
64 AMO 0.651685 0.932432
65 PAJ 0.651685 0.884615
66 2A5 0.650602 0.918919
67 MAP 0.647727 0.945946
68 3AT 0.647059 0.971831
69 AHX 0.644444 0.896104
70 DLL 0.644444 0.931507
71 ATR 0.642857 0.971429
72 PAP 0.642857 0.985714
73 PTJ 0.641304 0.896104
74 7D3 0.6375 0.905405
75 3UK 0.637363 0.918919
76 SON 0.634146 0.932432
77 A4P 0.633663 0.843373
78 ALF ADP 0.632184 0.87013
79 ADP ALF 0.632184 0.87013
80 PR8 0.630435 0.85
81 WAQ 0.630435 0.883117
82 LAD 0.630435 0.860759
83 B5V 0.630435 0.906667
84 AFH 0.628866 0.884615
85 LMS 0.628205 0.82716
86 GAP 0.627907 0.893333
87 DTP 0.627907 0.905405
88 VO4 ADP 0.625 0.931507
89 ADP VO4 0.625 0.931507
90 TXA 0.623656 0.932432
91 ME8 0.623656 0.839506
92 1ZZ 0.623656 0.839506
93 NB8 0.623656 0.896104
94 FYA 0.623656 0.905405
95 DQV 0.622449 0.958333
96 T5A 0.621359 0.841463
97 ADN 0.619718 0.84507
98 RAB 0.619718 0.84507
99 XYA 0.619718 0.84507
100 DAL AMP 0.611111 0.905405
101 9SN 0.610526 0.871795
102 48N 0.61 0.896104
103 AP0 0.607843 0.896104
104 9ZD 0.604396 0.907895
105 9ZA 0.604396 0.907895
106 FA5 0.604167 0.906667
107 B5M 0.604167 0.894737
108 YAP 0.604167 0.894737
109 B5Y 0.604167 0.894737
110 NAI 0.60396 0.907895
111 6V0 0.60396 0.896104
112 TXD 0.60396 0.907895
113 DND 0.60396 0.932432
114 NXX 0.60396 0.932432
115 NAX 0.60396 0.873418
116 ADP BMA 0.602151 0.918919
117 A2R 0.6 0.985915
118 OMR 0.598039 0.851852
119 TXE 0.598039 0.907895
120 XAH 0.597938 0.839506
121 7DT 0.593023 0.985714
122 AOC 0.592593 0.821918
123 4UV 0.591837 0.894737
124 DDS 0.590909 0.878378
125 139 0.590476 0.873418
126 CNA 0.584906 0.932432
127 6AD 0.58427 0.909091
128 5AS 0.583333 0.77907
129 5N5 0.581081 0.819444
130 GA7 0.58 0.906667
131 4UU 0.58 0.894737
132 4TC 0.576923 0.896104
133 ADJ 0.575472 0.851852
134 5CD 0.573333 0.805556
135 A4D 0.573333 0.819444
136 RGT 0.571429 0.958904
137 A3P 0.571429 0.971429
138 7D5 0.56962 0.878378
139 LAQ 0.568627 0.839506
140 F2R 0.564815 0.864198
141 80F 0.563636 0.841463
142 YLP 0.563107 0.819277
143 A A 0.5625 0.944444
144 UPA 0.561905 0.907895
145 AV2 0.56044 0.917808
146 COD 0.559633 0.811765
147 4UW 0.557692 0.860759
148 JB6 0.556701 0.883117
149 3AM 0.555556 0.929577
150 ATP A A A 0.555556 0.930556
151 A2P 0.552941 0.957143
152 TYM 0.552381 0.906667
153 NA7 0.552083 0.958904
154 EP4 0.551282 0.753247
155 MYR AMP 0.55102 0.817073
156 PPS 0.549451 0.873418
157 YLC 0.54717 0.839506
158 YLB 0.54717 0.819277
159 NAD 0.545455 0.931507
160 DAT 0.545455 0.905405
161 TYR AMP 0.544554 0.87013
162 G5A 0.544444 0.77907
163 M2T 0.544304 0.734177
164 DTA 0.544304 0.786667
165 3DH 0.54321 0.773333
166 128 0.542857 0.776471
167 AHZ 0.538462 0.817073
168 GTP 0.537634 0.92
169 SSA 0.537634 0.8
170 MTA 0.5375 0.773333
171 IOT 0.537037 0.831325
172 A3D 0.535714 0.918919
173 ARG AMP 0.533981 0.829268
174 7MD 0.533981 0.8625
175 AR6 AR6 0.533981 0.917808
176 YLA 0.53211 0.819277
177 AMP DBH 0.529412 0.893333
178 IMO 0.529412 0.929577
179 TAD 0.528846 0.884615
180 AYB 0.527273 0.809524
181 A5A 0.526882 0.807229
182 HDV 0.526882 0.893333
183 TSB 0.526316 0.819277
184 EAD 0.525424 0.873418
185 2AM 0.52439 0.943662
186 6RE 0.52381 0.759494
187 7DD 0.522727 0.985714
188 V3L 0.521739 0.971831
189 AVV 0.520833 0.896104
190 BTX 0.517857 0.841463
191 NAE 0.517241 0.894737
192 52H 0.515789 0.77907
193 54H 0.515789 0.788235
194 VMS 0.515789 0.788235
195 NSS 0.515464 0.8
196 BT5 0.513274 0.831325
197 NAQ 0.512821 0.871795
198 ZAS 0.511905 0.766234
199 J7C 0.511628 0.769231
200 A3N 0.511628 0.786667
201 5X8 0.511111 0.763158
202 53H 0.510417 0.77907
203 8X1 0.510417 0.752809
204 5CA 0.510417 0.8
205 NVA LMS 0.510204 0.752809
206 ARU 0.510204 0.860759
207 AF3 ADP 3PG 0.509259 0.8375
208 ZID 0.508475 0.918919
209 P1H 0.508197 0.851852
210 OVE 0.505882 0.905405
211 S4M 0.505747 0.666667
212 LEU LMS 0.50505 0.752809
213 LPA AMP 0.504673 0.817073
214 7MC 0.504587 0.841463
215 DZD 0.5 0.884615
216 FB0 0.5 0.804598
217 MAO 0.5 0.759036
218 DSZ 0.5 0.8
219 LSS 0.5 0.761364
220 DSH 0.5 0.725
221 P5A 0.5 0.744444
222 NDE 0.495935 0.932432
223 N0B 0.495798 0.819277
224 M24 0.495726 0.85
225 YLY 0.495726 0.809524
226 NJP 0.495575 0.945946
227 9K8 0.49505 0.714286
228 MGP 0.494737 0.884615
229 6C6 0.494624 0.881579
230 NAJ PZO 0.491379 0.848101
231 0WD 0.491228 0.921053
232 6G0 0.489583 0.884615
233 GJV 0.488636 0.75
234 6FA 0.488189 0.841463
235 5AD 0.486842 0.746479
236 KAA 0.485149 0.752809
237 GSU 0.485149 0.77907
238 71V 0.483146 0.907895
239 NEC 0.482759 0.746667
240 A3G 0.482759 0.8
241 ODP 0.482456 0.909091
242 FAS 0.48062 0.851852
243 FAD 0.48062 0.851852
244 7D7 0.480519 0.743243
245 FDA 0.480315 0.833333
246 N6P 0.48 0.915493
247 2SA 0.479167 0.932432
248 GP3 0.478723 0.921053
249 4TA 0.478261 0.807229
250 SFG 0.478261 0.75
251 G A A A 0.478261 0.871795
252 AMP NAD 0.478261 0.905405
253 NPW 0.477876 0.886076
254 NDP 0.477876 0.921053
255 NDC 0.47619 0.871795
256 YSA 0.47619 0.77907
257 NAJ PYZ 0.475 0.807229
258 MGO 0.474227 0.860759
259 GDP 0.473684 0.92
260 NZQ 0.473684 0.909091
261 TXP 0.473684 0.921053
262 6IA 0.473684 0.8375
263 A7D 0.472527 0.776316
264 SFD 0.469231 0.734043
265 A5D 0.468085 0.786667
266 SA8 0.468085 0.707317
267 ZDA 0.468085 0.864865
268 12D 0.46789 0.785714
269 PGS 0.467391 0.883117
270 MHZ 0.467391 0.697674
271 8PZ 0.466667 0.8
272 62F 0.466165 0.8625
273 DA 0.465909 0.878378
274 D5M 0.465909 0.878378
275 GGZ 0.464646 0.825
276 SAH 0.463158 0.74359
277 SAI 0.463158 0.734177
278 FAY 0.462687 0.8625
279 Y3J 0.4625 0.726027
280 PO4 PO4 A A A A PO4 0.460784 0.902778
281 AAM 0.460674 0.971429
282 RFL 0.459259 0.821429
283 SMM 0.459184 0.686047
284 HF7 0.459184 0.893333
285 AMZ 0.458824 0.916667
286 C2R 0.458824 0.90411
287 SAM 0.458333 0.690476
288 A3S 0.456522 0.810811
289 FNK 0.455224 0.804598
290 U A 0.453782 0.907895
291 7C5 0.453704 0.818182
292 EEM 0.453608 0.690476
293 AAT 0.453608 0.707317
294 XNP 0.452991 0.873418
295 A G 0.452991 0.883117
296 PRT 0.45283 0.931507
297 AIR 0.451219 0.901408
298 62X 0.45098 0.666667
299 DCA 0.45 0.823529
300 ETB 0.45 0.833333
301 GSP 0.45 0.873418
302 U A G G 0.449153 0.883117
303 NIA 0.448276 0.822785
304 A3T 0.446809 0.821918
305 A A A 0.446602 0.905405
306 K15 0.446602 0.682353
307 PUA 0.446281 0.884615
308 6K6 0.445545 0.930556
309 GEK 0.445545 0.7375
310 4YB 0.445455 0.761364
311 S7M 0.444444 0.690476
312 Z5A 0.443548 0.77907
313 1DG 0.443548 0.921053
314 DG1 0.443548 0.921053
315 0T1 0.442623 0.823529
316 COA 0.442623 0.823529
317 WSA 0.442478 0.788235
318 8BR 0.43956 0.906667
319 8Q2 0.438596 0.772727
320 101 0.438202 0.878378
321 IDP 0.4375 0.918919
322 NVA 2AD 0.4375 0.759494
323 9JJ 0.435714 0.8625
324 NAP 0.435484 0.945205
325 APU 0.434783 0.894737
326 A U 0.434783 0.87013
327 7RP 0.433333 0.928571
328 A6D 0.432692 0.722892
329 AMX 0.432 0.833333
330 J7V 0.432 0.833333
331 TAP 0.432 0.907895
332 COS 0.432 0.804598
333 CAO 0.432 0.795455
334 30N 0.432 0.752688
335 V1N 0.431193 0.917808
336 649 0.429825 0.744444
337 P5F 0.429577 0.823529
338 NA0 0.428571 0.932432
339 SCO 0.428571 0.823529
340 CMX 0.428571 0.823529
341 7RA 0.428571 0.957747
342 0UM 0.427184 0.698795
343 GAV 0.427184 0.884615
344 QQY 0.426966 0.815789
345 1RB 0.426966 0.885714
346 ACK 0.426966 0.861111
347 G1R 0.425743 0.907895
348 GCP 0.425743 0.896104
349 FAM 0.425197 0.804598
350 FCX 0.425197 0.795455
351 ACO 0.425197 0.795455
352 GNH 0.424242 0.907895
353 F2N 0.423611 0.813953
354 GKE 0.422018 0.884615
355 GDD 0.422018 0.884615
356 GDC 0.422018 0.884615
357 HAX 0.421875 0.804598
358 3AD 0.421687 0.805556
359 9GM 0.421569 0.896104
360 GNP 0.421569 0.896104
361 FA9 0.42069 0.864198
362 TM1 0.420561 0.77381
363 KB1 0.420561 0.698795
364 H6Y 0.42 0.945205
365 2MC 0.419847 0.769231
366 3KK 0.418605 0.804598
367 FYN 0.418605 0.823529
368 S8M 0.417476 0.759494
369 7L1 0.417323 0.795455
370 2VA 0.416667 0.8
371 26A 0.416667 0.763158
372 NHD 0.416667 0.905405
373 QQX 0.41573 0.805195
374 CA6 0.415385 0.729167
375 OXK 0.415385 0.804598
376 COK 0.415385 0.804598
377 SOP 0.415385 0.804598
378 MCD 0.415385 0.804598
379 YE1 0.413534 0.813953
380 RMB 0.413043 0.873239
381 FAI 0.413043 0.916667
382 AS 0.413043 0.833333
383 CO6 0.412214 0.804598
384 1VU 0.412214 0.795455
385 CMC 0.412214 0.804598
386 NMX 0.412214 0.76087
387 SXZ 0.411215 0.710843
388 ANZ 0.410714 0.8
389 SCA 0.410448 0.804598
390 CAJ 0.409091 0.804598
391 SCD 0.409091 0.823529
392 EO7 0.408602 0.788235
393 D3Y 0.407767 0.789474
394 CC5 0.407407 0.816901
395 KH3 0.40708 0.674419
396 A C A C 0.406504 0.848101
397 SLU 0.406504 0.770115
398 G 0.40625 0.906667
399 5GP 0.40625 0.906667
400 A1S 0.406015 0.804598
401 IVC 0.406015 0.813953
402 MLC 0.406015 0.804598
403 3HC 0.406015 0.813953
404 1HE 0.406015 0.786517
405 BCO 0.406015 0.804598
406 GTG 0.405405 0.886076
407 NMN AMP PO4 0.404959 0.87013
408 3D1 0.404762 0.773333
409 3L1 0.404762 0.773333
410 2BA 0.404255 0.915493
411 CMP 0.404255 0.901408
412 VRT 0.40404 0.769231
413 SO8 0.40404 0.789474
414 MCA 0.402985 0.795455
415 COO 0.402985 0.804598
416 CAA 0.402985 0.813953
417 3NZ 0.401869 0.782051
418 G2R 0.401869 0.884615
419 ZZB 0.4 0.77381
420 2FA 0.4 0.813333
421 MC4 0.4 0.76087
422 2CP 0.4 0.795455
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3QX9; Ligand: ATP; Similar sites found with APoc: 18
This union binding pocket(no: 1) in the query (biounit: 3qx9.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
1 1L6O SER LEU LYS LEU MET THR THR VAL None
2 2ZFZ ARG None
3 3SJK LYS PRO VAL LEU ARG THR ALA 1.57895
4 5UBG PRT 2.89855
5 3ATY FMN 3.62319
6 1RKX NAD 4.34783
7 4KWI 1TJ 5.7971
8 4KWI NAP 5.7971
9 2BD0 NAP 5.7971
10 2FXU BID 6.52174
11 3AI7 TPP 6.52174
12 1EB1 ASP TYR GLU PRO ILE PRO GLU GLU ALA PHE 7.24638
13 5TA6 79D 8.69565
14 2BEK ATP 8.94942
15 2IVD FAD 9.42029
16 3RMK BML 11.5942
17 4CYI ATP 13.7681
18 3O84 HTJ 17.3913
Pocket No.: 2; Query (leader) PDB : 3QX9; Ligand: ATP; Similar sites found with APoc: 163
This union binding pocket(no: 2) in the query (biounit: 3qx9.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
1 1I0S NAP None
2 1I0S FMN None
3 1XSE NDP None
4 3HV8 C2E None
5 1USF NAP None
6 1USF FMN None
7 5ZEC NAP None
8 5VKM GAL SIA None
9 4JB1 FAD None
10 4JB1 NAP None
11 1S8F GDP None
12 2HO2 PRO PRO PRO PRO PRO PRO PRO PRO PRO LEU None
13 1YNQ NDP None
14 5ANU 58T None
15 5CG1 NAD BBN None
16 4YC0 5OF None
17 1GZ6 NAI None
18 3K87 FAD 2.17391
19 4MSG 2C6 2.17391
20 3QBT GNP 2.17391
21 3KJD 78P 2.17391
22 4L9Z OXL 2.17391
23 4L9Z COA 2.17391
24 3WR7 COA 2.17391
25 5Z2L NDP 2.17391
26 1FK8 NAD 2.17391
27 1Y1P NMN AMP PO4 2.17391
28 4F07 FAD 2.89855
29 4HVA 4HV 2.89855
30 4MFL MFK 2.89855
31 1UP7 NAD 2.89855
32 5WUW NAP 2.89855
33 4L6C 0BT 2.89855
34 5W11 CTR 2.89855
35 4OSP NAP 2.89855
36 2CSN CKI 2.89855
37 3E9I XAH 2.89855
38 3ZOD HQE 3.62319
39 3ZOD FMN 3.62319
40 6H3O FAD 3.62319
41 3H7R NAP 3.62319
42 1LLU NAD 3.62319
43 5EH0 5NW 3.62319
44 4O0L NDP 3.62319
45 2ZBA COA 3.62319
46 3HMO STU 3.62319
47 3TO7 COA 3.62319
48 1PVC ILE SER GLU VAL 4.34783
49 3AFH GSU 4.34783
50 3WB0 FEG 4.34783
51 2Z3U CRR 4.34783
52 5GT9 NAP 4.34783
53 1JIL 485 4.34783
54 2FGE ALA ALA LEU THR ARG ALA 4.34783
55 6BMN PAP 4.34783
56 5FUI APY 4.54545
57 2GOU FMN 5.07246
58 4CM9 NAP 5.07246
59 5JDC NAP 5.07246
60 5JDI NAP 5.07246
61 5JCJ NAP 5.07246
62 2WD7 NAP 5.07246
63 2VZ0 NAP 5.07246
64 2VZ0 D64 5.07246
65 3BMQ NAP 5.07246
66 4CMI NAP 5.07246
67 4CM8 NAP 5.07246
68 5K6A NAP 5.07246
69 4CM4 NAP 5.07246
70 4CLR NAP 5.07246
71 2PVN P63 5.07246
72 4CME NAP 5.07246
73 3BMN NAP 5.07246
74 3CV6 HXS 5.07246
75 3JQ7 NAP 5.07246
76 4CLO NAP 5.07246
77 3CV6 NAP 5.07246
78 3BMO NAP 5.07246
79 3JQF NAP 5.07246
80 3JQG NAP 5.07246
81 6MPT C30 5.07246
82 3JQ9 NAP 5.07246
83 3JQB NAP 5.07246
84 3JQ8 NAP 5.07246
85 2R14 TXD 5.07246
86 3JQA NAP 5.07246
87 3JQA DX4 5.07246
88 2R14 FMN 5.07246
89 2JAH NDP 5.07246
90 1KQB FMN 5.07246
91 5MF5 C2E 5.7971
92 5DK4 5BX 5.7971
93 4J75 TYM 5.7971
94 5DK4 ATP 5.7971
95 1OJZ NAD 5.7971
96 1HFU NAG NDG 5.7971
97 5YEC ATP 5.7971
98 1WLE SRP 5.7971
99 2DKN NAI 5.7971
100 4U03 TLL 6.52174
101 4U03 GTP 6.52174
102 4LJ3 C2E 6.52174
103 3SBZ MLI 6.52174
104 2UUU FAD 6.52174
105 2B4Q NAP 6.52174
106 6CI9 NAP 6.52174
107 2ZTG A5A 6.52174
108 1XKQ NDP 6.52174
109 3A5Z KAA 7.24638
110 1MXH NAP 7.24638
111 4JIQ FMN 7.24638
112 4JIQ 1L5 7.24638
113 4R57 ACO 7.24638
114 4O1M NAD 7.24638
115 5T79 NDP 7.24638
116 3I7V B4P 7.46269
117 2RCU BUJ 7.97101
118 4PVD NDP 7.97101
119 1R37 NAD 7.97101
120 3GEG NAD 7.97101
121 1E8G FAD 8.69565
122 1E8G FCR 8.69565
123 1T36 ADP 8.69565
124 3HF3 FMN 8.69565
125 5N5U 7N8 9.42029
126 5OGX FAD 9.42029
127 3SJU NDP 9.42029
128 4H8N NDP 9.42029
129 6H45 QEI 9.42029
130 1RPN NDP 9.42029
131 3UEC ALA ARG TPO LYS 10.1449
132 4MFZ MFK 10.1449
133 1R6U TYM 10.1449
134 4CQM NAP 10.1449
135 1X54 4AD 10.8696
136 1YQS BSA 10.8696
137 3H4V DVP 10.8696
138 3H4V NAP 10.8696
139 4NVQ 2OD 10.8696
140 2V6G NAP 10.8696
141 4NVQ SAH 10.8696
142 1VYP FMN 10.8696
143 3F8D FAD 11.5942
144 3DEK RXD 11.5942
145 5YSS NAD 12.3188
146 2D3Y DU 12.3188
147 4YRY FAD 12.3188
148 6A1G 9OL 12.3188
149 3PJU C2E 13.0435
150 4KQR VPP 13.0435
151 3AL3 SER ILE TYR PHE TPO PRO GLU LEU TYR ASP 13.0435
152 3QWI NAP 13.0435
153 4FN4 NAD 14.4928
154 5F3I 5UJ 15.2174
155 6FX2 FUC C4W NAG BMA MAN NAG GAL 16.2791
156 2D37 FMN 16.6667
157 2D37 NAD 16.6667
158 1XL8 OCB 18.8406
159 4QVB F42 18.8406
160 2II3 CAO 18.8406
161 1XK9 P34 18.8406
162 3PTG 932 21.0145
163 4G6I RS3 22.4638
Pocket No.: 3; Query (leader) PDB : 3QX9; Ligand: ATP; Similar sites found with APoc: 53
This union binding pocket(no: 3) in the query (biounit: 3qx9.bio3) has 13 residues
No: Leader PDB Ligand Sequence Similarity
1 1QKQ MAN None
2 4KOT CE3 None
3 1R1Q ACE ARG GLU PTR VAL ASN VAL None
4 2FAV APR 1.44928
5 1SVK ALF GDP 2.17391
6 1FLM FMN 3.27869
7 3CH6 311 3.62319
8 3CH6 NAP 3.62319
9 4A3U FMN 3.62319
10 3TN7 NJP 3.89105
11 5XWV NDP 4.34783
12 1ICP FMN 4.34783
13 4C2C ALA ALA ALA 4.34783
14 4L80 1VU 4.34783
15 1W8D NAP 4.34783
16 4TW7 37K 4.6875
17 1JYQ MAZ PTR PTM ASN 5.20833
18 1DJL NAP 5.7971
19 5MKG C2E 5.7971
20 2JFN UMA 5.7971
21 5LYH 7B8 6.52174
22 4A91 GLU 6.52174
23 5KVM THR TYR PHE ALA VAL LEU MET VAL SER 6.52174
24 3A5Y KAA 7.24638
25 1MXH DHF 7.24638
26 2PID YSA 7.24638
27 5ZCM NDP DTT 7.24638
28 4KXL 6C6 7.97101
29 1E6E FAD 7.97101
30 5BVE 4VG 8.69565
31 2CYB TYR 8.69565
32 2WZM NA7 8.69565
33 1NU4 MLA 9.27835
34 5N5U AMP 9.42029
35 4PJT 2YQ 9.42029
36 2FY3 CHT 10.1449
37 1R6T TYM 11.5942
38 5JCA FAD 11.5942
39 6DWD GTP 12.3188
40 6DWD HDV 12.3188
41 4CS4 AXZ 12.3188
42 2JLD AG1 13.0435
43 5M1T C2E 13.7681
44 1EP2 FAD 13.7681
45 5J62 FMN 14.4928
46 3ZLQ 6T9 14.7541
47 3IAL PR8 15.942
48 2HSA FMN 17.3913
49 2BVD ISX 18.8406
50 4OYA 1VE 21.0145
51 5GK9 ACO 22
52 6B92 SAH 22.4638
53 5V59 8X1 26.8116
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