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Receptor
PDB id Resolution Class Description Source Keywords
1YQC 1.71 Å EC: 3.5.3.19 CRYSTAL STRUCTURE OF UREIDOGLYCOLATE HYDROLASE (ALLA) FROM E COLI O157:H7 ESCHERICHIA COLI ALLA UREIDOGLYCOLATE HYDROLASE PURINE METABOLISM STRUCTUGENOMICS MONTREAL-KINGSTON BACTERIAL STRUCTURAL GENOMICS INITIATIVE BSGI
Ref.: CRYSTAL STRUCTURE OF UREIDOGLYCOLATE HYDROLASE (ALL ESCHERICHIA COLI O157:H7 PROTEINS V. 61 454 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GLV A:1001;
Valid;
none;
submit data
74.035 C2 H2 O3 C(=O)...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1YQC 1.71 Å EC: 3.5.3.19 CRYSTAL STRUCTURE OF UREIDOGLYCOLATE HYDROLASE (ALLA) FROM E COLI O157:H7 ESCHERICHIA COLI ALLA UREIDOGLYCOLATE HYDROLASE PURINE METABOLISM STRUCTUGENOMICS MONTREAL-KINGSTON BACTERIAL STRUCTURAL GENOMICS INITIATIVE BSGI
Ref.: CRYSTAL STRUCTURE OF UREIDOGLYCOLATE HYDROLASE (ALL ESCHERICHIA COLI O157:H7 PROTEINS V. 61 454 2005
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1YQC - GLV C2 H2 O3 C(=O)C(=O)....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1YQC - GLV C2 H2 O3 C(=O)C(=O)....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1YQC - GLV C2 H2 O3 C(=O)C(=O)....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GLV; Similar ligands found: 5
No: Ligand ECFP6 Tc MDL keys Tc
1 GLV 1 1
2 MAE 0.5 0.666667
3 FUM 0.5 0.666667
4 OXD 0.416667 0.75
5 CCU 0.411765 0.666667
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1YQC; Ligand: GLV; Similar sites found with APoc: 258
This union binding pocket(no: 1) in the query (biounit: 1yqc.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 4CQK PIO None
2 3DCJ THH None
3 1UPT GTP None
4 1P6O HPY None
5 5KK4 44E None
6 1FWM CB3 1.17647
7 1ZPR CB3 1.17647
8 5NBW 8SK 1.17647
9 5H2U 1N1 1.49813
10 1A8R GTP 1.76471
11 5O1I 9GH 1.76471
12 1EK0 GNP 1.76471
13 5ZAI COA 1.76471
14 4CNG SAH 1.76471
15 2AGD NAG MAN BMA 1.76471
16 2AGD UDH 1.76471
17 3VPC ADP 1.76471
18 4ZCC NAI 1.78571
19 5EP2 AZU 2.35294
20 1F52 ADP 2.35294
21 5BO9 SIA GAL NGS 2.35294
22 2ORO 228 2.35294
23 1T7Q COA 2.35294
24 1T7Q 152 2.35294
25 1PN0 FAD 2.35294
26 1PN0 IPH 2.35294
27 1JS3 PLP 142 2.35294
28 5DI3 GNP 2.35294
29 3C3N FMN 2.35294
30 4UUU SAM 2.58065
31 5JBX MLI 2.94118
32 4NZ4 NDG 2.94118
33 4X7R 3YW 2.94118
34 4X7R NTO 2.94118
35 4X7R UDP 2.94118
36 2ZL7 FUC GAL NGA 2.94118
37 4N9I PCG 2.94118
38 3ZQ6 ADP ALF 2.94118
39 4CNE SAH 2.94118
40 3T7V SAM 2.94118
41 3OJI PYV 2.94118
42 4ZRN NAD 2.94118
43 4OCV ANP 2.94118
44 5YBN AKG 2.94118
45 4X8O AP5 2.94118
46 3IO3 ADP 2.94118
47 4INI AMP 3.07692
48 6BT4 KPM 3.46535
49 5RHN 8BR 3.47826
50 2WET FAD 3.52941
51 3VSV XYS 3.52941
52 4IZC 1GZ 3.52941
53 4JGP PYR 3.52941
54 3FC4 EDO 3.52941
55 1ZPT FAD 3.52941
56 3GYQ SAM 3.52941
57 1GY8 UDP 3.52941
58 6EJI UD2 3.52941
59 1VDC FAD 3.52941
60 4NU0 AP5 3.52941
61 3UYK 0CX 3.52941
62 3X01 AMP 3.52941
63 4TTS 6DD 3.52941
64 1GAR U89 3.52941
65 2CFI ZZZ 3.52941
66 5O2D 9HH 3.52941
67 1XKD NAP 3.52941
68 2YW2 ATP 3.52941
69 5AVF TAU 3.52941
70 1MEX RAC 3.52941
71 5G41 AP5 3.52941
72 2BMB PMM 3.52941
73 4BI7 PGA 3.52941
74 4ZFL 4NK 3.52941
75 4UWH JXM 3.52941
76 1B55 4IP 3.5503
77 3VPB ADP 3.57143
78 4JLS 3ZE 3.94737
79 4XBA 5GP 4.11765
80 1P7T ACO 4.11765
81 4XBA GMP 4.11765
82 3O7J 2AL 4.11765
83 2RCU BUJ 4.11765
84 5DOZ NDP 4.11765
85 5Y5Q DUT 4.11765
86 1FP6 ADP 4.11765
87 5WS9 AMP 4.11765
88 1B66 BIO 4.28571
89 1LRH NLA 4.29448
90 5VM6 9EG 4.37956
91 2Z3H BLO 4.61538
92 2Q4H AMP 4.70588
93 1S7G APR 4.70588
94 3TM0 ANP 4.70588
95 3TM0 B31 4.70588
96 4ZS4 ATP 4.70588
97 5VYQ FON 4.70588
98 2FHK MFN 4.70588
99 1UOZ GLC SSG SSG SGC 4.70588
100 3OTX AP5 4.70588
101 1OLT SAM 4.70588
102 2ZWI C5P 4.70588
103 5MW8 ATP 4.70588
104 2BKK ADP 4.73373
105 1VC9 ATP 4.7619
106 2FR6 CTN 4.79452
107 2FR6 URI 4.79452
108 5HTL C2E 4.82759
109 5ETR APC 4.96894
110 5ETR 5RW 4.96894
111 3N1S 5GP 5.04202
112 1TMM APC 5.06329
113 1TMM HHR 5.06329
114 1WUR 8DG 5.29412
115 6CGD AKN 5.29412
116 6CGD GNP 5.29412
117 1IHU AF3 5.29412
118 1IHU ADP 5.29412
119 1KJ8 GAR 5.29412
120 1KJ8 ATP 5.29412
121 1OBD ATP 5.29412
122 3OYZ ACO 5.29412
123 4L80 1VU 5.29412
124 6DNT NAD 5.29412
125 2CDN ADP 5.29412
126 2YAJ 4HP 5.29412
127 1GSA ADP 5.29412
128 2EUG URA 5.29412
129 4WOP CTP 5.29412
130 3KLL MAL 5.29412
131 4GV8 DUP 5.32544
132 4WS6 WBU 5.46218
133 2Q37 3AL 5.52486
134 4IE6 UN9 5.65657
135 5ZEC NAP 5.88235
136 2A5F GTP 5.88235
137 1Z0S ATP 5.88235
138 4EN4 GT1 5.88235
139 4EN4 GT0 5.88235
140 5FI4 5XV 5.88235
141 4EN4 ATP 5.88235
142 2QFY AKG 5.88235
143 3BFV ADP 5.88235
144 2PK3 GDD 5.88235
145 4MKF AP5 5.88235
146 1EBG PAH 5.88235
147 4AFH L0B 5.88235
148 2WTX UDP 5.88235
149 4CL6 7SB 5.88235
150 3LOO B4P 5.88235
151 4XJC TTP 5.88235
152 2WTX VDO 5.88235
153 4E1O PLP PVH 5.88235
154 4LZB URA 5.88235
155 4YGM URA 5.88235
156 1SQL GUN 6.16438
157 2BLN U5P 6.47059
158 2BLN FON 6.47059
159 2X24 X24 6.47059
160 3PCR GTP 6.47059
161 4C0X AQN 6.47059
162 3V4S ATP 6.47059
163 3ORQ ADP 6.47059
164 5JAQ NAI 6.47059
165 3V4S ADP 6.47059
166 2RGX AP5 6.47059
167 1E7S NAP 6.47059
168 5VN0 FAD 6.47059
169 2WME NAP 6.47059
170 3JQ3 ADP 6.47059
171 4JAL SAH 6.58683
172 1N07 FMN 6.74847
173 4DO1 ANN 7.05882
174 6HTO 5AD 7.05882
175 6HTO MET 7.05882
176 3ZDS M8O 7.05882
177 2PTZ PAH 7.05882
178 3W6G FLC 7.05882
179 4JWF SAH 7.05882
180 1OC2 TDX 7.05882
181 1OC2 NAD 7.05882
182 3ZDS OMD 7.05882
183 1YVD GNP 7.10059
184 5OFI 9TQ 7.37705
185 3P48 DUP 7.48299
186 3ZLR X0B 7.59494
187 3ZXR P3S 7.64706
188 3ZXR IQ1 7.64706
189 3KO8 NAD 7.64706
190 1CBK ROI 7.64706
191 2YK7 CSF 7.64706
192 5J5Z FAD 7.64706
193 4YFY 1YJ 7.64706
194 1HFE CYS 7.64706
195 5H9I XAN 7.64706
196 1NJF AGS 7.64706
197 3BEO UDP 7.64706
198 3DOE GTP 7.8125
199 1MZV AMP 8.23529
200 4B3J COA 8.23529
201 5J6D 6H5 8.23529
202 5VYR B62 8.23529
203 5VYR GMP 8.23529
204 5XVR TRH 8.23529
205 5WXK TYD 8.23529
206 1SJN DUP 8.23529
207 4R29 SAM 8.23529
208 3KMW ATP 8.52713
209 5H5O PCG 8.52713
210 1RE8 BD2 8.82353
211 5C4L 4XR 8.82353
212 4J75 TYM 8.82353
213 1DQN IMU 8.82353
214 6BHQ NAG NAG FUL BMA MAN MAN NAG GAL 8.82353
215 1XCL SAH 9.41177
216 1GTE IUR 10
217 1GTE FMN 10
218 3ND6 ATP 10
219 3FYP PEP 10
220 2XG5 EC2 10
221 2XG5 EC5 10
222 5G5G MCN 10
223 4G9N NGA 10.4895
224 3EAU PDN 10.5882
225 4L9Z COA 10.5882
226 4L9Z OXL 10.5882
227 2RIF AMP 10.6383
228 1ST0 GTG 10.6825
229 5UAO FAD 11.1765
230 5LRT ADP 11.1765
231 4B0T ADP 11.1765
232 5FA5 MTA 11.1765
233 3DLG GWE 11.7647
234 3NK7 SAM 11.7647
235 5ZB0 ADP 11.7647
236 5ZB0 TYD 11.7647
237 3T1A 5MA 11.7647
238 1Z0J GTP 11.8644
239 3BL7 DD1 11.9601
240 5WA9 9ZD 12.4031
241 1AV5 AP2 12.6984
242 1PN4 HDC 12.9412
243 5OVL NAP 12.9412
244 1EZ0 NAP 12.9412
245 1ZEI CRS 13.2075
246 5FLJ QUE 13.5294
247 5A3T MMK 13.5294
248 1SG4 CO8 14.1176
249 4S3R 7SA 15.2941
250 5EXT ADP 15.2941
251 4WZ8 3W7 15.8824
252 6DF7 G9V 16.1677
253 4LCN GNG 18.2353
254 4Q5H ANP 18.4211
255 1OS7 AKG 20.5882
256 1OS7 TAU 20.5882
257 5K2M ADP 26.4151
258 5DV2 C5P 28.8235
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