Receptor
PDB id Resolution Class Description Source Keywords
1BFC 2.2 Å NON-ENZYME: SIGNAL_HORMONE BASIC FIBROBLAST GROWTH FACTOR COMPLEXED WITH HEPARIN HEXAME HOMO SAPIENS GROWTH FACTOR MITOGEN VASCULARIZATION HEPARIN-BINDING
Ref.: HEPARIN STRUCTURE AND INTERACTIONS WITH BASIC FIBRO GROWTH FACTOR. SCIENCE V. 271 1116 1996
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SGN IDS UAP SGN IDS SGN A:302;
Valid;
none;
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1720.31 n/a [S+2]...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4OEE 1.5 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURE ANALYSIS OF FGF2-DISACCHARIDE (S3I2) COMPL HOMO SAPIENS HEPARIN/HEPARIN SULFATE BINDING PROTEIN BINDING
Ref.: INTERACTIONS THAT INFLUENCE THE BINDING OF SYNTHETI SULFATE BASED DISACCHARIDES TO FIBROBLAST GROWTH FA ACS CHEM.BIOL. V. 9 1712 2014
Members (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 263 families.
1 1BFC - SGN IDS UAP SGN IDS SGN n/a n/a
2 1BFB - SGN IDS UAP SGN n/a n/a
3 4OEE Kd = 1.73 uM GNX IDY n/a n/a
4 4OEG Kd = 9.01 uM SUS IDY n/a n/a
5 4OEF Kd = 17.5 uM SGN IDY n/a n/a
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 196 families.
1 1BFC - SGN IDS UAP SGN IDS SGN n/a n/a
2 1BFB - SGN IDS UAP SGN n/a n/a
3 4OEE Kd = 1.73 uM GNX IDY n/a n/a
4 4OEG Kd = 9.01 uM SUS IDY n/a n/a
5 4OEF Kd = 17.5 uM SGN IDY n/a n/a
50% Homology Family (9)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 272 families.
1 1HKN - N2M C10 H9 N O3 S c1cc2cc(cc....
2 2UUS - SCR C12 H22 O35 S8 C([C@@H]1[....
3 3K1X - DBX C6 H6 O5 S c1cc(c(cc1....
4 3JUT - GTQ C7 H6 O4 c1cc(c(cc1....
5 1BFC - SGN IDS UAP SGN IDS SGN n/a n/a
6 1BFB - SGN IDS UAP SGN n/a n/a
7 4OEE Kd = 1.73 uM GNX IDY n/a n/a
8 4OEG Kd = 9.01 uM SUS IDY n/a n/a
9 4OEF Kd = 17.5 uM SGN IDY n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SGN IDS UAP SGN IDS SGN; Similar ligands found: 17
No: Ligand ECFP6 Tc MDL keys Tc
1 SGN IDS UAP SGN IDS SGN 1 1
2 SGN IDS UAP SGN 1 1
3 UAP SGN IDS SGN IDS SGN 1 1
4 UAP SGN IDS SGN 1 1
5 UAP SGN IDS SGN IDS 0.839623 1
6 SGN IDS SGN IDS 0.72381 0.967742
7 SGN IDS SGN IDS SGN 0.66087 0.9375
8 SGN IDS SGN IDS SGN IDS 0.60177 0.952381
9 IDS SGN IDS SGN IDS 0.561983 0.952381
10 IDS SGN IDS SGN IDS IDS 0.548387 0.9375
11 IDS SGN IDS SGN IDS SUS IDS SGN 0.548387 0.952381
12 SGN IDY 0.495495 0.876923
13 IDU SGN 0.491071 0.904762
14 SGN IXD 0.491071 0.904762
15 NGY BDP SGN IDS SGN BDP 0.485507 0.895522
16 SUS IDY 0.448276 0.846154
17 GNS BDP GNS IDS GNS BDP NPO 0.431655 0.810811
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4OEE; Ligand: GNX IDY; Similar sites found: 5
This union binding pocket(no: 1) in the query (biounit: 4oee.bio1) has 13 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1JIF CU BLM 0.03676 0.404 5.7377
2 1M4I KAN 0.04855 0.40634 7.74194
3 1M4I PAP 0.04855 0.40634 7.74194
4 1M4I COA 0.04855 0.40634 7.74194
5 4WEI GLC GAL 0.007684 0.41471 10.3226
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