Receptor
PDB id Resolution Class Description Source Keywords
7BP5 1.9 Å NON-ENZYME: OTHER STRUCTURAL INSIGHTS INTO NUCLEOSOME REORGANIZATION BY NAP1-R PROTEIN 1 (NRP1) ARABIDOPSIS THALIANA COMPLEX HISTONE PLANT PROTEIN NUCLEAR PROTEIN
Ref.: NAP1-RELATED PROTEIN 1 (NRP1) HAS MULTIPLE INTERACT FOR CHAPERONING HISTONES H2A-H2B. PROC.NATL.ACAD.SCI.USA V. 117 30391 2020
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ASN ASP PRO ASP TYR C:373;
 Valid;
 none;
 submit data
n/a n/a
GOL B:201;
 Invalid;
 none;
 submit data
92.094 C3 H8 O3 C(C(C...
GLU GLU ASN ASP PRO ASP TYR C:373;
 Invalid;
 none;
 submit data
619.564 n/a O=C([...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
7BP6 1.58 Å NON-ENZYME: OTHER STRUCTURAL INSIGHTS INTO NUCLEOSOME REORGANIZATION BY NAP1-R PROTEIN 1 (NRP1) ARABIDOPSIS THALIANA COMPLEX HISTONE PLANT PROTEIN NUCLEAR PROTEIN-CHAPERONE C
Ref.: NAP1-RELATED PROTEIN 1 (NRP1) HAS MULTIPLE INTERACT FOR CHAPERONING HISTONES H2A-H2B. PROC.NATL.ACAD.SCI.USA V. 117 30391 2020
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1610 families.
1 7BP4 - ASP ASP ASP ASP TYR n/a n/a
2 7BP5 - ASN ASP PRO ASP TYR n/a n/a
3 7BP6 - ASP ALA ASP GLU GLU ASP PHE n/a n/a
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1331 families.
1 7BP4 - ASP ASP ASP ASP TYR n/a n/a
2 7BP5 - ASN ASP PRO ASP TYR n/a n/a
3 7BP6 - ASP ALA ASP GLU GLU ASP PHE n/a n/a
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1144 families.
1 7BP4 - ASP ASP ASP ASP TYR n/a n/a
2 7BP5 - ASN ASP PRO ASP TYR n/a n/a
3 7BP6 - ASP ALA ASP GLU GLU ASP PHE n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: ASN ASP PRO ASP TYR; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: ASN ASP PRO ASP TYR; Similar ligands found: 2
No: Ligand Similarity coefficient
1 ASN ASP PRO ASP TYR 1.0000
2 ASP ASP ASP ASP TYR 0.9653
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 7BP6; Ligand: ASP ALA ASP GLU GLU ASP PHE; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 7bp6.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
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