Receptor
PDB id Resolution Class Description Source Keywords
6W4Y 1.91 Å NON-ENZYME: OTHER STRUCTURE OF FULL-LENGTH HUMAN LAMBDA-6A LIGHT CHAIN JTO IN WITH HYDANTOIN STABILIZER HOMO SAPIENS AMYLOIDOSIS IMMUNE SYSTEM
Ref.: STRUCTURAL BASIS FOR THE STABILIZATION OF AMYLOIDOG IMMUNOGLOBULIN LIGHT CHAINS BY HYDANTOINS. BIOORG.MED.CHEM.LETT. V. 30 27356 2020
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GOL A:302;
 Invalid;
 none;
 submit data
92.094 C3 H8 O3 C(C(C...
PO4 A:303;
B:301;
 Invalid;
Invalid;
 none;
none;
 submit data
94.971 O4 P [O-]P...
7ZW A:301;
 Valid;
 none;
 submit data
357.328 C16 H18 F3 N3 O3 CC(C)...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6MG5 1.8 Å NON-ENZYME: OTHER STRUCTURE OF FULL-LENGTH HUMAN LAMBDA-6A LIGHT CHAIN JTO IN WITH COUMARIN 1 HOMO SAPIENS LIGHT CHAIN AMYLOIDOSIS IMMUNE SYSTEM
Ref.: STABILIZATION OF AMYLOIDOGENIC IMMUNOGLOBULIN LIGHT BY SMALL MOLECULES. PROC.NATL.ACAD.SCI.USA V. 116 8360 2019
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1610 families.
1 6W4Y - 7ZW C16 H18 F3 N3 O3 CC(C)C[C@@....
2 6MG5 Kd = 20.3 uM 6ZW C14 H17 N O2 CCN(CC)c1c....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1331 families.
1 6W4Y - 7ZW C16 H18 F3 N3 O3 CC(C)C[C@@....
2 6MG5 Kd = 20.3 uM 6ZW C14 H17 N O2 CCN(CC)c1c....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1144 families.
1 6W4Y - 7ZW C16 H18 F3 N3 O3 CC(C)C[C@@....
2 6MG5 Kd = 20.3 uM 6ZW C14 H17 N O2 CCN(CC)c1c....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: 7ZW; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 7ZW 1 1
Similar Ligands (3D)
Ligand no: 1; Ligand: 7ZW; Similar ligands found: 3
No: Ligand Similarity coefficient
1 M8V 0.9228
2 M8J 0.8963
3 M8S 0.8820
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 6MG5; Ligand: 6ZW; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 6mg5.bio1) has 16 residues
No: Leader PDB Ligand Sequence Similarity
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