Receptor
PDB id Resolution Class Description Source Keywords
6RV5 1.58 Å EC: 2.4.1.10 X-RAY STRUCTURE OF THE LEVANSUCRASE FROM ERWINIA TASMANIENSI COMPLEX WITH LEVANBIOSE ERWINIA TASMANIENSIS (STRAIN DSM 17950109463 / ET1/99) LEVANSUCRASE LEVANBIOSE FRUCTOSYLTRANSFERASE FRUCTANS PROTRANSFERASE
Ref.: THE STRUCTURE OF SUCROSE-SOAKED LEVANSUCRASE CRYSTA FROMERWINIA TASMANIENSISREVEALS A BINDING POCKET FO LEVANBIOSE. INT J MOL SCI V. 21 2019
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ZN A:512;
A:513;
 Part of Protein;
Part of Protein;
 none;
none;
 submit data
65.409 Zn [Zn+2...
GOL A:502;
A:509;
A:505;
A:507;
A:501;
A:508;
A:511;
A:506;
A:503;
A:510;
A:504;
 Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
 none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
 submit data
92.094 C3 H8 O3 C(C(C...
FRU FRU B:1;
 Valid;
 none;
 submit data
340.281 n/a O=CC1...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6RV5 1.58 Å EC: 2.4.1.10 X-RAY STRUCTURE OF THE LEVANSUCRASE FROM ERWINIA TASMANIENSI COMPLEX WITH LEVANBIOSE ERWINIA TASMANIENSIS (STRAIN DSM 17950109463 / ET1/99) LEVANSUCRASE LEVANBIOSE FRUCTOSYLTRANSFERASE FRUCTANS PROTRANSFERASE
Ref.: THE STRUCTURE OF SUCROSE-SOAKED LEVANSUCRASE CRYSTA FROMERWINIA TASMANIENSISREVEALS A BINDING POCKET FO LEVANBIOSE. INT J MOL SCI V. 21 2019
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 6RV5 - FRU FRU n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 6RV5 - FRU FRU n/a n/a
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 6M0E - FRU C6 H12 O6 C([C@@H]1[....
2 3VSS - FRU C6 H12 O6 C([C@@H]1[....
3 6RV5 - FRU FRU n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: FRU FRU; Similar ligands found: 5
No: Ligand ECFP6 Tc MDL keys Tc
1 FRU FRU 1 1
2 FRU FRU FRU 0.446154 0.972973
3 FRU FRU FRU FRU 0.446154 0.972973
4 GLC FRU FRU FRU 0.4 0.897436
5 ZEE UEA FRU FRU FRU 0.4 0.897436
Similar Ligands (3D)
Ligand no: 1; Ligand: FRU FRU; Similar ligands found: 3
No: Ligand Similarity coefficient
1 GLC FRU 0.9109
2 MMA MAN 0.8590
3 0U8 0.8561
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 6RV5; Ligand: FRU FRU; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 6rv5.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
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