Receptor
PDB id Resolution Class Description Source Keywords
6FBT 2.5 Å EC: 7.-.-.- THE X-RAY STRUCTURE OF LYTIC TRANSGLYCOSYLASE SLT FROM PSEUD AERUGINOSA IN COMPLEX WITH THE REACTION PRODUCT NAG- A NHNAMPENTAPEPTIDE PSEUDOMONAS AERUGINOSA LYTIC TRANSGLYCOSYLASE LYASE
Ref.: EXOLYTIC AND ENDOLYTIC TURNOVER OF PEPTIDOGLYCAN BY TRANSGLYCOSYLASE SLT OFPSEUDOMONAS AERUGINOSA. PROC. NATL. ACAD. SCI. V. 115 4393 2018 U.S.A.
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
PO4 A:701;
A:705;
A:704;
A:702;
A:703;
 Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
 none;
none;
none;
none;
none;
 submit data
94.971 O4 P [O-]P...
NAG AH0 ALA DGL API DAL DAL E:1;
 Valid;
 Atoms found LESS than expected: % Diff = 0.029;
 submit data
965.021 n/a O=C([...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6FBT 2.5 Å EC: 7.-.-.- THE X-RAY STRUCTURE OF LYTIC TRANSGLYCOSYLASE SLT FROM PSEUD AERUGINOSA IN COMPLEX WITH THE REACTION PRODUCT NAG- A NHNAMPENTAPEPTIDE PSEUDOMONAS AERUGINOSA LYTIC TRANSGLYCOSYLASE LYASE
Ref.: EXOLYTIC AND ENDOLYTIC TURNOVER OF PEPTIDOGLYCAN BY TRANSGLYCOSYLASE SLT OFPSEUDOMONAS AERUGINOSA. PROC. NATL. ACAD. SCI. V. 115 4393 2018 U.S.A.
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 319 families.
1 6FBT - NAG AH0 ALA DGL API DAL DAL n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 271 families.
1 6FBT - NAG AH0 ALA DGL API DAL DAL n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 223 families.
1 6FBT - NAG AH0 ALA DGL API DAL DAL n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: NAG AH0 ALA DGL API DAL DAL; Similar ligands found: 13
No: Ligand ECFP6 Tc MDL keys Tc
1 NAG AH0 ALA DGL API DAL DAL 1 1
2 MLD 0.636986 0.952381
3 ALA NAG AH0 DAL 0.622047 0.873016
4 NAG AH0 0.539683 0.857143
5 ALA FGA API DAL DAL MUB 0.503401 0.857143
6 ALA FGA LYS DAL DAL AMV NAG 0.503226 0.892308
7 AH0 NAG 0.442748 0.828125
8 AH0 ALA FGA LYS 0.439189 0.9375
9 AMU ALA NAG DGL 0.425676 0.857143
10 MUB ALA NAG DGN 0.42 0.873016
11 AMV ALA FGA LYS DAL DAL 0.416667 0.846154
12 MUB ALA NAG ZGL 0.413333 0.873016
13 MUB ALA NAG GLN 0.410596 0.857143
Similar Ligands (3D)
Ligand no: 1; Ligand: NAG AH0 ALA DGL API DAL DAL; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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