-->
Receptor
PDB id Resolution Class Description Source Keywords
6F5W 1.91 Å NON-ENZYME: BINDING PHOTORHABDUS ASYMBIOTICA LECTIN (PHL) IN COMPLEX WITH PROPAR FUCOSIDE PHOTORHABDUS ASYMBIOTICA LECTIN SEVEN-BLADED BETA-PROPELLER SUGAR BINDING PROTEIN
Ref.: SYNTHESIS OF ALPHA-L-FUCOPYRANOSIDE-PRESENTING GLYC AND INVESTIGATION OF THEIR INTERACTION WITH PHOTORH ASYMBIOTICA LECTIN (PHL). CHEMISTRY V. 24 4055 2018
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NA A:403;
B:402;
B:404;
A:404;
B:403;
B:405;
A:402;
A:401;
B:401;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
22.99 Na [Na+]
CL B:409;
A:408;
B:406;
A:409;
B:410;
A:405;
A:407;
B:407;
A:419;
B:408;
A:406;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
35.453 Cl [Cl-]
KG1 A:415;
B:417;
A:417;
B:415;
A:418;
B:414;
A:416;
B:416;
B:413;
A:413;
A:414;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
Kd = 149 uM
202.204 C9 H14 O5 C[C@H...
DMS B:412;
A:411;
A:410;
B:411;
A:412;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
submit data
78.133 C2 H6 O S CS(=O...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6F5W 1.91 Å NON-ENZYME: BINDING PHOTORHABDUS ASYMBIOTICA LECTIN (PHL) IN COMPLEX WITH PROPAR FUCOSIDE PHOTORHABDUS ASYMBIOTICA LECTIN SEVEN-BLADED BETA-PROPELLER SUGAR BINDING PROTEIN
Ref.: SYNTHESIS OF ALPHA-L-FUCOPYRANOSIDE-PRESENTING GLYC AND INVESTIGATION OF THEIR INTERACTION WITH PHOTORH ASYMBIOTICA LECTIN (PHL). CHEMISTRY V. 24 4055 2018
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 5MXG Kd = 4.44 mM FUC GAL NAG n/a n/a
2 6F5W Kd = 149 uM KG1 C9 H14 O5 C[C@H]1[C@....
3 5MXH ic50 = 377.96 mM GAL C6 H12 O6 C([C@@H]1[....
4 5MXF Kd = 0.26 mM MFU C7 H14 O5 C[C@H]1[C@....
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 5MXG Kd = 4.44 mM FUC GAL NAG n/a n/a
2 6F5W Kd = 149 uM KG1 C9 H14 O5 C[C@H]1[C@....
3 5MXH ic50 = 377.96 mM GAL C6 H12 O6 C([C@@H]1[....
4 5MXF Kd = 0.26 mM MFU C7 H14 O5 C[C@H]1[C@....
5 5C9P - FUC C6 H12 O5 C[C@H]1[C@....
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 298 families.
1 5MXG Kd = 4.44 mM FUC GAL NAG n/a n/a
2 6F5W Kd = 149 uM KG1 C9 H14 O5 C[C@H]1[C@....
3 5MXH ic50 = 377.96 mM GAL C6 H12 O6 C([C@@H]1[....
4 5MXF Kd = 0.26 mM MFU C7 H14 O5 C[C@H]1[C@....
5 5C9P - FUC C6 H12 O5 C[C@H]1[C@....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: KG1; Similar ligands found: 3
No: Ligand ECFP6 Tc MDL keys Tc
1 KG1 1 1
2 MFU 0.452381 0.851852
3 MFB 0.452381 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 6F5W; Ligand: KG1; Similar sites found with APoc: 21
This union binding pocket(no: 1) in the query (biounit: 6f5w.bio1) has 21 residues
No: Leader PDB Ligand Sequence Similarity
1 3WXL ADP 2.43902
2 4WCX ALA 2.43902
3 5UIV TMP 2.64317
4 2OCI TYC 2.75591
5 1OS7 AKG 2.82686
6 2PA7 TYD 3.5461
7 2ZX2 RAM 3.58974
8 3CYQ AMU 3.62319
9 1GPM AMP 3.79404
10 5LN8 GAL 3.81679
11 3A16 PXO 4.06504
12 4M1U A2G MBG 4.3771
13 5BTX CMP 4.79452
14 4IAW LIZ 5.85106
15 1DZT ATY 6.55738
16 5TPU TYD 7.91367
17 3GD8 GOL 8.52018
18 1M2Z BOG 8.56031
19 5D3X 4IP 9.58084
20 2GOO NDG 9.80392
21 1GG6 APL 11.4504
22 2G30 ALA ALA PHE 50
Pocket No.: 2; Query (leader) PDB : 6F5W; Ligand: KG1; Similar sites found with APoc: 70
This union binding pocket(no: 2) in the query (biounit: 6f5w.bio1) has 11 residues
No: Leader PDB Ligand Sequence Similarity
1 2BOS GLA GAL GLC None
2 2BOS GLA GAL None
3 3PH4 AOS None
4 3E8N VRA 1.17302
5 3E8N ATP 1.17302
6 5F2T PLM 1.62338
7 6EXF LYS 1.62602
8 3HNC TTP 1.62602
9 3C6K MTA 1.62602
10 3C6K SPD 1.62602
11 2WGH DTP 1.62602
12 4MLO PAM 1.81159
13 2PW0 TRC 1.89702
14 3AVR OGA 1.89702
15 3O0Q TTP 2.16802
16 1KKR 2AS 2.16802
17 4LFL TG6 2.32558
18 2QZS GLC 2.43902
19 2QZS 250 2.43902
20 2QZS ADP 2.43902
21 1TFZ 869 2.43902
22 1WG8 SAM 2.45614
23 2Z7R STU 2.49221
24 3CTL S6P 2.5974
25 1TZJ A3B 2.66272
26 2CDC NAP 2.73224
27 2CDC XYS 2.73224
28 2CDC XYP 2.73224
29 4YRD 3IT 2.78552
30 4QDC ASD 2.98103
31 4QDF 30Q 2.98103
32 4CYI ATP 2.98103
33 5E2N V14 3.04183
34 1SQI 869 3.52304
35 1T36 ORN 3.52304
36 3T2C 13P 3.52304
37 5K2M ADP 3.663
38 5U3B 7TD 3.67893
39 5EOB 5QQ 3.76176
40 5FP3 3JI 3.79404
41 2D3M COA 4.06504
42 2YKL NLD 4.16667
43 2TPS TPS 4.40529
44 5JFT ACE ASP GLU VAL ASP 0QE 4.41767
45 4NZ6 DGL 4.47284
46 2FLI DX5 4.54545
47 1N62 MCN 4.60705
48 3STD MQ0 4.84848
49 1H0H MGD 4.87805
50 4EUU BX7 5.64263
51 5CUO COA 5.94059
52 5DRB 5FJ 6.18557
53 3C0G 3AM 6.55271
54 3RI1 3RH 6.70927
55 5C8L GLC 7.14286
56 2WK9 PLP 7.31707
57 5GS9 ARG 7.4184
58 3MMG GLU THR VAL ARG PHE GLN SER ASP 8.29876
59 3RSR N5P 8.94309
60 5X1M DHB 8.94309
61 4C3Y ANB 10.0271
62 2GAG FAD 10.4762
63 3B99 U51 10.5691
64 4DVR 0LY 10.9589
65 1IGJ DGX 11.9266
66 4ZOH MCN 12.2302
67 5FPX GLY SER SER HIS HIS HIS HIS HIS 15.0442
68 5ODQ 9SB 16.4286
69 4M26 AKG 16.4835
70 3VPB ADP 17.8571
Pocket No.: 3; Query (leader) PDB : 6F5W; Ligand: KG1; Similar sites found with APoc: 177
This union binding pocket(no: 3) in the query (biounit: 6f5w.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 2HJR APR 1.21951
2 16PK BIS 1.35501
3 5BUK FAD 1.35501
4 3WMX NAD 1.39665
5 5ZYN FAD 1.62602
6 4YKG FAD 1.62602
7 4V24 GYR 1.62602
8 3O84 HTJ 1.62602
9 3LU1 NAD 1.64835
10 5OGX FAD 1.78571
11 1PZM 5GP 1.89573
12 1MDB AMP DBH 1.89702
13 5KVS NAP 1.89702
14 5KVS 6XR 1.89702
15 1FL2 FAD 1.93548
16 1YKF NAP 1.98864
17 1QDS PGA 1.99203
18 5UR0 NAD 2.00573
19 3N2S FMN 2.00803
20 5ZI2 NAD 2.02899
21 9LDB NAD 2.10843
22 6FK3 PPI 2.16802
23 4REP FAD 2.16802
24 1XHC FAD 2.17984
25 5LD5 NAD 2.23464
26 2B4R NAD 2.31884
27 5HDJ FMN 2.33463
28 6CEP NAD 2.39521
29 3DEK RXD 2.40964
30 5B4B LP5 2.41935
31 1PVN MZP 2.43902
32 1G51 AMP 2.43902
33 6B2M COA 2.44755
34 2BKX F6R 2.47934
35 2ZGY GDP 2.5
36 2AMT GPP 2.51572
37 1QFY FAD 2.5974
38 1QFY NAP 2.5974
39 5ZEC NAP 2.63158
40 3D1R FBP 2.67062
41 1VHD NAP 2.69542
42 3I73 ADP 2.71003
43 5E4R NAP 2.71003
44 4DOL PLM 2.76498
45 1LYX PGA 2.82258
46 4CQE CQE 2.8777
47 2PD4 NAD 2.90909
48 2PD4 DCN 2.90909
49 4XDA ADP 2.91262
50 3ND6 ATP 2.92398
51 4JB1 NAP 2.94118
52 4JB1 FAD 2.94118
53 3B1J NAD 2.94985
54 1VPM COA 2.95858
55 1WPY BTN 2.97872
56 1C0I FAD 3.0303
57 1C0I BE2 3.0303
58 3FPZ AHZ 3.06748
59 3OVR 5SP 3.07018
60 3CR3 ADP 3.125
61 4U7W NDP 3.25203
62 6BKA FMN 3.25203
63 1R27 MGD 3.25203
64 2WSI FAD 3.26797
65 4P86 5GP 3.27869
66 3LZW FAD 3.31325
67 4XTX 590 3.33333
68 1V9N NDP 3.33333
69 1Z2I NAD 3.35196
70 1SOW NAD 3.35366
71 5NNA BZM 3.40909
72 3P2H NOO 3.48259
73 3OID NDP 3.48837
74 3TN7 NJP 3.50195
75 5TCI MLI 3.52304
76 5TUK FAD 3.52304
77 1CER NAD 3.62538
78 4IEN COA 3.68098
79 3OFK SAH 3.7037
80 1COY FAD 3.79404
81 3X0V FAD 3.79404
82 1VPE ANP 3.79404
83 4PLG NAI 3.89222
84 4PLG OXM 3.89222
85 5LNQ CAA 3.93873
86 4XF6 ADP 4.0293
87 4XF6 INS 4.0293
88 4XF6 LIP 4.0293
89 1RM6 FAD 4.06504
90 4O33 TZN 4.06504
91 4O33 3PG 4.06504
92 2E5V FAD 4.06504
93 5AE2 FYC 4.06504
94 5AE2 FAD 4.06504
95 4G2R H1L 4.06504
96 3OZ2 OZ2 4.06504
97 2A8Y MTA 4.07407
98 1RDT L79 4.13223
99 3FAL REA 4.13223
100 3ITJ FAD 4.14201
101 1FM9 9CR 4.20168
102 6A5Y 9CR 4.20168
103 2JG1 ANP 4.24242
104 4M8E 29V 4.329
105 4POJ 2VP 4.329
106 4MIB 28M 4.33604
107 3TAO PGH 4.33604
108 2ISJ FMN 4.34783
109 1LCK GLU GLY GLN PTR GLN PRO GLN PRO ALA 4.57143
110 1F5V FMN 4.58333
111 3UWV 2PG 4.5977
112 2V1O COA 4.63576
113 1E6E FAD 4.6875
114 5J62 FMN 4.7619
115 1Q1R FAD 4.87805
116 3AB1 FAD 5
117 3A4M ADP 5
118 4YQE PLQ 5.07614
119 4YQE FMN 5.07614
120 3K56 IS3 5.26316
121 1G27 BB1 5.35714
122 2BGM NAJ 5.39568
123 4NBT NAD 5.41667
124 1ZB6 DIN 5.53746
125 1ZB6 GST 5.53746
126 4USR FAD 5.54017
127 3IP8 B85 5.64516
128 2YPI PGA 5.66802
129 1QMG APX 5.69106
130 4GAH 0ET 5.74163
131 1XCL SAH 5.95745
132 5GQX GLC GLC GLC GLC GLC GLC GLC 5.96206
133 3TMK T5A 6.01852
134 2YY7 NAD 6.08974
135 5G5G FAD 6.11354
136 3R5Z F42 6.2069
137 1BKJ FMN 6.25
138 1P0H ACO 6.28931
139 1P0H COA 6.28931
140 2CUL FAD 6.46552
141 5XDT ZI7 6.49351
142 4POO SAM 6.5
143 1U1I NAD 6.50407
144 5FI4 5XV 6.77507
145 4KOT CE3 6.79012
146 4P9Z NMI PTR 02K ASN NH2 6.83761
147 4MZQ 1VU 6.94444
148 2Z6J FMN 7.22892
149 1SW0 PGA 7.25806
150 2W9S TOP 7.45342
151 6DIO NAD 7.85908
152 4USF 6UI 7.89474
153 3TAY MN0 7.97546
154 1NFQ NAI 8.07692
155 1NAA ABL 8.13008
156 1NAA 6FA 8.13008
157 2RDK MAN MAN 8.25688
158 2YI0 YI0 8.29694
159 3R5J ACE ALA ASP VAL ALA ASA 8.92857
160 2GMH FAD 9.21409
161 4DQ2 BTX 9.45122
162 5WKC TP9 10.0271
163 5WKC AUJ 10.0271
164 3KV8 FAH 10.0719
165 5GVH FMN 10.5096
166 4YRY FAD 10.5691
167 4Y85 499 10.8434
168 3BM1 FMN 10.929
169 4WVI MAL 11.9241
170 3PNL ADP 12.3223
171 1HE1 AF3 12.5
172 1PN4 HDC 13.9286
173 4EMJ FAD 14.9533
174 3RMK BML 21.6867
175 4JWJ SAH 22.2772
176 5UMY TNN 22.8571
177 3HRD FAD 24.375
Pocket No.: 4; Query (leader) PDB : 6F5W; Ligand: KG1; Similar sites found with APoc: 75
This union binding pocket(no: 4) in the query (biounit: 6f5w.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
1 3MKH FAD 1.08401
2 4BGB ADP 1.23077
3 3HAV ATP 1.67224
4 2RDQ AKG 1.73611
5 4MFZ MFK 2.0649
6 3A7R LAQ 2.07715
7 5D2R 56W 2.16802
8 1GQ2 NAP 2.16802
9 2WBP SIN 2.23464
10 2WBP ZZU 2.23464
11 6G1P CIT 2.28571
12 5A3T MMK 2.43902
13 4B0T ADP 2.43902
14 2E5A LAQ 2.59366
15 2O07 MTA 2.63158
16 2O07 SPD 2.63158
17 5LRT ADP 2.71003
18 4OAV ACP 2.71003
19 2C42 PYR 2.71003
20 2C42 TPP 2.71003
21 2XIB DFU 2.71003
22 4XV1 904 2.73973
23 5JFS 6K0 2.92208
24 5FBN 5WF 2.95203
25 5SXS NIZ 2.98103
26 3PP0 03Q 3.25444
27 4KBA 1QM 3.32326
28 2QV6 GTP 3.35821
29 2OFW ADX 3.36538
30 2PT9 S4M 3.42679
31 2PT9 2MH 3.42679
32 4K81 GTP 3.48837
33 5MZI FAD 3.52304
34 5MZI FYK 3.52304
35 5EXE 5SR 3.52304
36 4CCK OGA 3.52304
37 4CCN OGA 3.52304
38 5LIA 6XN 3.79404
39 4FAJ LEU VAL THR LEU VAL PHE VAL 3.79404
40 3D9F FAD 3.79404
41 2P4S DIH 3.79404
42 2I7C AAT 3.88693
43 5JZJ AN2 4.0404
44 5TKJ ALA VAL GLY ILE GLY ALA VAL PHE 4.10959
45 5LXB 7A9 4.13223
46 1PCA CIT 4.33604
47 4R3U 3KK 4.43038
48 4R3U 3HC 4.43038
49 5W10 CMP 4.61538
50 4NW6 2NS 4.64396
51 5EO8 TFU 4.82315
52 5N0L ILE 5.03145
53 5AE9 OKO 5.42005
54 2VZZ SCA 5.50459
55 4JD3 PLM 5.66572
56 4JD3 COA 5.66572
57 6C1S EFV 5.69106
58 4WW8 VD9 5.70342
59 3WDX BGC BGC GLC 5.7047
60 2ARC ARA 6.09756
61 5XVG 8FX 6.14334
62 6EKZ SNP 6.40244
63 5UR1 YY9 6.75241
64 2PVN P63 7.31707
65 1W1A NDG 7.393
66 2XMY CDK 7.71812
67 3LKJ LKJ 7.80142
68 3FW4 CAQ 7.86517
69 4EWH T77 8
70 5EYK 5U5 8.47458
71 5WS9 ATP 9.4851
72 1KYZ SAH 9.86301
73 4C2V YJA 11.3636
74 5KY9 GDP 15
75 3HRD MCN 24.375
Pocket No.: 5; Query (leader) PDB : 6F5W; Ligand: KG1; Similar sites found with APoc: 256
This union binding pocket(no: 5) in the query (biounit: 6f5w.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 3ABI NAD None
2 4UYE 9F9 None
3 1V3S ATP None
4 4CM8 IZ9 0.694444
5 3JQB DX6 0.694444
6 4CM9 YGL 0.694444
7 4CMI M4V 0.694444
8 3BD9 A3P 0.714286
9 4BR5 ANP 0.813008
10 4YVZ 3AT 0.813008
11 5JJR 68E 1.35501
12 1VBH PEP 1.35501
13 2IYA UDP 1.35501
14 3CIF NAD 1.35501
15 4EIL NDP 1.35501
16 5AHW CMP 1.36054
17 4Z24 FAD 1.62602
18 1QZR ANP 1.62602
19 1YP4 ADP 1.62602
20 5JFL NAD 1.62602
21 2Z5F A3P 1.67785
22 4I5I 4I5 1.74216
23 5EQ8 HSO 1.80505
24 3VGL ANP 1.86916
25 1Q8A HCS 1.89702
26 3BOF HCS 1.89702
27 1RC0 KT5 1.91388
28 5LAU AR6 1.92308
29 1Q20 A3P 2.00669
30 1Q20 PLO 2.00669
31 2R0D 4IP 2.01729
32 2R09 4IP 2.01729
33 6FDF SAH 2.09581
34 3FSY SCA 2.10843
35 5B19 TLA 2.15517
36 5YJS SAL 2.16802
37 5KJW 53C 2.16802
38 5HSA FAS 2.16802
39 4IVG ANP 2.16802
40 5L01 6Z4 2.16802
41 1P3D UMA 2.16802
42 1WOQ BGC 2.24719
43 2BSA FAD 2.31023
44 2BSA NAP 2.31023
45 3H9E NAD 2.31214
46 1WDI CIT 2.31884
47 3EYA TDP 2.36794
48 1I0B PEL 2.40964
49 2VBF TPP 2.43902
50 5Y2C NAG NAG NAG NAG NAG 2.43902
51 4R8L ASP 2.43902
52 5DNC ASN 2.43902
53 3DFR NDP 2.46914
54 1NWU NAG NAG NAG NDG 2.48619
55 5TVA AMP 2.5
56 1HTW ADP 2.53165
57 5L9O GOP 2.61194
58 5UBG PRT 2.65487
59 2D2I NAP 2.71003
60 3WQT ANP 2.71003
61 5DK4 5BX 2.73556
62 5DK4 ATP 2.73556
63 1G63 FMN 2.76243
64 3MEH THP 2.7972
65 5KXE 6Y2 2.88066
66 6EQS BV8 2.90909
67 5J3R GSH 2.95567
68 4GUS FAD 2.98103
69 4FWE FAD 2.98103
70 4GUT FAD 2.98103
71 4HSU FAD 2.98103
72 6F97 FAD 2.98103
73 5XKT GNP 3
74 5MDH NAD 3.003
75 4UTW RFW 3.05677
76 6D5X ATP 3.06122
77 5ZFJ 9BF 3.0837
78 5Z54 0HZ 3.0837
79 5JGL SAM 3.11419
80 4OHU 2TK 3.11419
81 4OHU NAD 3.11419
82 1XUJ BOZ 3.13901
83 1SU2 ATP 3.14465
84 1VHT BA3 3.21101
85 4HA9 NDP 3.21285
86 5XGX DAS DLY 3.25203
87 6DVH FMN 3.25203
88 1JV1 UD1 3.25203
89 1V97 MTE 3.25203
90 2GK6 ADP 3.25203
91 4RKX 3S9 3.44828
92 3RF4 FUN 3.44828
93 4BLW AMP 3.46021
94 4BLW SAH 3.46021
95 5UXF 2BA 3.50877
96 2DX7 CIT 3.50877
97 1QPB PYM 3.52304
98 1ZPD DPX 3.52304
99 3WD1 ST7 3.52304
100 2V7Y ADP 3.52304
101 5TCI 79V 3.52304
102 1ZXM ANP 3.52304
103 1GEE NAD 3.52304
104 4Z0H NAD 3.59281
105 1YJQ NAP 3.63036
106 1KQF MGD 3.68664
107 3T4L ZEA 3.7037
108 3OJI PYV 3.7037
109 4FUA PGH 3.72093
110 1TUF AZ1 3.79404
111 3GDN FAD 3.79404
112 3GDN HBX 3.79404
113 2JLD AG1 3.80952
114 5HRA DAS 3.82979
115 5DXV NAP 3.84615
116 5EW0 3C7 3.84615
117 3WCS MAN NAG 3.93701
118 3WCS MAN NAG GAL 3.93701
119 1KQN NAD 3.94265
120 5UL4 SAM 4.06504
121 3KJS DQ1 4.06504
122 5G3U FDA 4.06504
123 2JHP SAH 4.06504
124 3KJS NAP 4.06504
125 4ZLU 4PW 4.06504
126 4ZLU ADP 4.06504
127 3U2U UDP 4.18251
128 2I0K FAD 4.33604
129 1WD4 AHR 4.33604
130 3LL5 IPE 4.41767
131 3LL5 ADP 4.41767
132 1M4I PAP 4.41989
133 1M4I KAN 4.41989
134 1M4I COA 4.41989
135 4UP3 NDP 4.4586
136 4WP9 ZDA 4.51977
137 2XVF FAD 4.60705
138 4ADC PLP 4.60705
139 1NST A3P 4.61538
140 2POC UD1 4.63215
141 4CL6 7SB 4.67836
142 2WOE AR6 4.68227
143 5YSS NAD 4.6875
144 5ZCM NDP DTT 4.69208
145 1AQU A3P 4.7138
146 1DJL NAP 4.83092
147 2VK4 TPP 4.87805
148 4D42 W0I 4.96454
149 4D42 NAP 4.96454
150 1VP5 NAP 5.03356
151 1ZRH A3P 5.10949
152 1J99 AND 5.11945
153 1DRV A3D 5.12821
154 4GCZ ADP 5.14905
155 1OX5 1PR 5.14905
156 2QCS ANP 5.15464
157 4L2I NAD 5.32319
158 4L2I FAD 5.32319
159 1UAY ADN 5.3719
160 3Q9O NAD 5.42005
161 3CQ5 PMP 5.42005
162 3KJD 78P 5.42005
163 2DWU DGL 5.43478
164 1NW4 IMH 5.43478
165 2Q2V NAD 5.4902
166 3DAK ANP 5.51724
167 5TWJ SAM 5.55556
168 2D4V NAD 5.69106
169 4JEJ 1GP 5.7377
170 2X06 NAD 5.81395
171 1S9A BEZ 5.83658
172 2VVT I24 5.86207
173 4GBM A3P 5.88235
174 2BW7 APC 5.93607
175 2BW7 ECS 5.93607
176 4BJZ P3A 5.96206
177 4BJZ FAD 5.96206
178 1XNG ATP 5.96206
179 5W7M SAH 6.08974
180 3HGM ATP 6.12245
181 3S6X SIA GAL BGC 6.15385
182 2Q6B HR2 6.23306
183 2DT3 NAG NAG NAG NAG NAG NAG 6.37119
184 5ALC TIQ 6.48148
185 3W9Z FMN 6.50407
186 3JUC PCA 6.53595
187 4UTU LRY 6.55022
188 1NYT NAP 6.64207
189 1PNO NAP 6.66667
190 5A04 BGC 6.78466
191 5A04 NDP 6.78466
192 4J7H TRH 7.04607
193 2J3M ATP 7.04607
194 4YNU LGC 7.04607
195 3V3L V3L 7.05882
196 5B4T NAD 7.30769
197 5B4T 3HR 7.30769
198 3Q9T FAY 7.31707
199 4JWF SAH 7.37327
200 3R5Y F42 7.48299
201 4NAE 1GP 7.55556
202 6F8N NAG NAG 7.58808
203 2ICY UPG 7.58808
204 5WRJ A3P 7.59076
205 2GZM DGL 7.86517
206 5ZBL AMP 7.88177
207 1HXD BTN 8.09969
208 3NRR NAP 8.13008
209 3F4F UMP 8.13008
210 1VKJ A3P 8.42105
211 2WUL GSH 8.47458
212 3ESS 18N 8.69565
213 3FIU AMP 8.83534
214 3P48 DUP 8.84354
215 1TMM HHR 8.86076
216 1TMM APC 8.86076
217 1O94 ADP 9.09091
218 1FIQ MTE 9.14286
219 1FIQ SAL 9.14286
220 4MAF ADX 9.21409
221 4JWH SAH 9.26518
222 5WHU SIA GAL GLC 9.39597
223 2YYY NAP 9.91254
224 1YBQ BDH 10.0271
225 1ONX ASP 10.0271
226 4IAE 1DX 10.0529
227 1XK9 P34 10.2326
228 3TWO NDP 10.3448
229 3NRZ MTE 10.4918
230 3NRZ HPA 10.4918
231 5IDM ANP 10.6145
232 3B82 NAD 10.628
233 3N6M GTP 10.8401
234 5EB4 FAD 11.3821
235 5WM2 AMP 11.3821
236 5WM2 SAL 11.3821
237 1F7K UMP 11.7647
238 3QV1 NAD 12.1951
239 1SFF IK2 12.4661
240 1T8U A3P 12.5
241 4KXL 6C6 12.5
242 3V1Y NAD 12.7596
243 2XCM ADP 13.0841
244 4XT8 NAP 13.1783
245 4XT8 TMQ 13.1783
246 3TTZ 07N 13.6364
247 5T2Y 753 14.1414
248 5ZJ5 NAI 14.1975
249 6GD6 EVB 14.8148
250 3R5W F42 15.1786
251 4KAX 4IP 15.3846
252 2WR9 MAN MAN 16.4062
253 4XSH NAI 17.8771
254 4FOU C2E 21.9697
255 4FOJ C2E 21.9697
256 4M20 COA 27.5591
Pocket No.: 6; Query (leader) PDB : 6F5W; Ligand: KG1; Similar sites found with APoc: 119
This union binding pocket(no: 6) in the query (biounit: 6f5w.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 4DR9 BB2 None
2 5ZCT ANP 0.653595
3 5JDI 6JO 0.694444
4 5JCJ 6JM 0.694444
5 3ZNN 4WL 1.44092
6 3ZNN FAD 1.44092
7 1VL8 NAP 1.49813
8 2WTX UDP 1.62602
9 1AJ8 COA 1.62602
10 5EF7 5OJ 1.64835
11 2PID YSA 1.68539
12 6EOF ADP 1.89702
13 5FFF 5XC 1.94553
14 3WGT FAD 2.01729
15 1H74 ADP 2.02703
16 1LUA NAP 2.09059
17 1ON3 MCA 2.16802
18 3CTY FAD 2.19436
19 1I7L ATP 2.26537
20 3I6I NDP 2.31214
21 1VHW ADN 2.37154
22 2D7C GTP 2.39521
23 1GPE FAD 2.43902
24 1D4D FAD 2.43902
25 3QFU ADP 2.43902
26 1Q7B NAP 2.45902
27 6EOA FMN 2.46154
28 1M9H NAD 2.51799
29 2BL9 NDP 2.52101
30 2VZ6 FEF 2.55591
31 5LX6 78P 2.6178
32 5Y9D FAD 2.71003
33 3HJ1 UTP 2.71003
34 1REO FAD 2.71003
35 3IAE D7K 2.71003
36 3OQJ 3CX 2.72374
37 2GJN NIS 2.7439
38 5A5W GUO 2.7668
39 4OSP NAP 2.98103
40 4LH0 GLV 2.98103
41 5D85 FLC 3.06748
42 4D9C PMP 3.21637
43 3ZLB ANP 3.25203
44 5NUE NAD 3.31325
45 4BUY F37 3.33333
46 1QPB TPP 3.52304
47 3HIG BRN 3.52304
48 3HIY UTP 3.52304
49 1T36 ADP 3.52304
50 3ICT FAD 3.79404
51 3ICT COA 3.79404
52 5K5M 68T 3.79404
53 1NLU IVA PHI TYB 3.79404
54 4J3L AJ5 3.80952
55 5N87 N66 3.83387
56 3NKV GNP 4
57 5TS5 FAD 4.06504
58 1CSI OAA 4.06504
59 1CSI CMX 4.06504
60 1PS9 NAP 4.06504
61 2BVN GNP 4.06504
62 5BRT FAD 4.06504
63 5NWD 9C8 4.18848
64 4NBI D3Y 4.26829
65 4UP3 FAD 4.4586
66 1KBJ FMN 4.60705
67 2V2V V12 4.79705
68 3IHG FAD 4.87805
69 2CDU ADP 4.87805
70 3L5R 47X 4.91803
71 3LM9 FRU 4.96689
72 4KM2 TOP 5.02793
73 4KM2 ATR 5.02793
74 3ICC NAP 5.09804
75 1MVN FMN 5.26316
76 1DR1 NAP 5.29101
77 1DR1 HBI 5.29101
78 2DKH 3HB 5.42005
79 6AU6 GDP 5.42005
80 3NT6 FAD 5.42005
81 1D4O NAP 5.43478
82 1SQL GUN 5.47945
83 1S7G APR 5.5336
84 2CIG 1DG 5.66038
85 3GPO APR 5.95238
86 2RAB FAD 5.96206
87 1OJZ NAD 6.13208
88 1FS5 TLA 6.39098
89 2IMF TOM 6.40394
90 2IMF GSH 6.40394
91 3IX9 NDP 6.50407
92 4NBW NAD 6.61479
93 4OR7 NAP 6.66667
94 1RSG FAD 6.77507
95 1VEM GLC GLC 6.77507
96 1S4M LUM 6.82594
97 6GAS FAD 7.25076
98 1AOE GW3 7.29167
99 1AOE NDP 7.29167
100 1T3Q MCN 7.7381
101 4GV4 MEJ 7.84314
102 5VN0 NAI 8.13008
103 1LVL NAD 8.67209
104 1PK8 ATP 8.67209
105 1PT2 SUC 9.4851
106 4B9E FAH 9.63455
107 5U5N NAD 9.67742
108 2X1L ADN 10.0271
109 1CS4 GSP 10.2222
110 2NPX FAD 10.5691
111 5G10 6DK 10.8401
112 5D6J ATP 12.1622
113 3EEL 53T 12.7753
114 2P6W FLC 13.1455
115 4YEE 4CQ 14.4444
116 2P53 NNG 14.9051
117 1ZK4 NAP 15.5378
118 3LXR GDP 17.2973
119 3D36 ADP 23.7705
Pocket No.: 7; Query (leader) PDB : 6F5W; Ligand: KG1; Similar sites found with APoc: 88
This union binding pocket(no: 7) in the query (biounit: 6f5w.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 1EYQ NAR None
2 2Z3Y F2N 1.89702
3 6FYZ EBE 1.89702
4 3LAD FAD 1.89702
5 5X2Z 3LM 1.89702
6 5X30 4LM 1.89702
7 5X8G S0N 1.89702
8 3WGT QSC 2.01729
9 3IQE H4M 2.12014
10 4MOP 2H5 2.16802
11 1JBW TMF 2.16802
12 1CL2 PPG 2.16802
13 2IV2 2MD 2.16802
14 3DCJ THH 2.32558
15 3DLS ADP 2.38806
16 1G51 AMO 2.43902
17 1Q9I FAD 2.43902
18 1Q9I TEO 2.43902
19 2VVL FAD 2.43902
20 1VDC FAD 2.7027
21 1GTE FAD 2.71003
22 4I4B NAD 2.71003
23 1GQG DCD 2.85714
24 5BRE 4UZ 2.98103
25 4DSG UDP 3.25203
26 4DSG FAD 3.25203
27 6MA3 JAJ 3.25203
28 1V97 FAD 3.25203
29 4P53 NAI 3.25203
30 4AUT FAD 3.25203
31 5OLK DTP 3.25203
32 4ZCC NAI 3.27381
33 4ZCC FAD 3.27381
34 1UJP CIT 3.32103
35 1I8T FAD 3.54223
36 3MAX LLX 3.54223
37 1H82 GZZ 3.79404
38 5TTJ FAD 3.79404
39 3WQQ IB3 3.79404
40 3WQQ NDP 3.79404
41 1H82 FAD 3.79404
42 2IID PHE 4.06504
43 2IID FAD 4.06504
44 4RPL FAD 4.06504
45 1PS9 FAD 4.06504
46 4L50 D8X 4.13534
47 1HYH NAD 4.20712
48 1EFV AMP 4.31373
49 2YG3 FAD 4.33604
50 4IV9 FAD 4.33604
51 2B9W FAD 4.60705
52 1Y1P NMN AMP PO4 4.67836
53 2VCH UDP 4.87805
54 6CED EYA 5.60748
55 4ONA UW1 5.69106
56 4AT0 FAD 5.69106
57 4YSX FAD 5.76923
58 1RSD PSB 5.78512
59 5MTE BB2 5.83942
60 5FJN BE2 6.14035
61 5FJN FAD 6.14035
62 4U8P FDA 6.23306
63 4U8P UDP 6.23306
64 2C7G ODP 6.50407
65 2C7G FAD 6.50407
66 5Y6Q MCN 6.50407
67 1M7G ADX 6.63507
68 1M7G ADP 6.63507
69 1YY5 FAD 6.77507
70 2Z6I FMN 6.92771
71 4P8K FAD 7.04607
72 4P8K 38C 7.04607
73 3GD4 NAD 7.04607
74 3K7M FAD 7.31707
75 5MBX SP5 7.58808
76 5MBX FAD 7.58808
77 5JCA FAD 8.67209
78 5JCA NDP 8.67209
79 1B8U OAA 8.81459
80 2GV8 FAD 8.94309
81 5YB7 FAD 8.94309
82 5YB7 ORN 8.94309
83 1FIQ FAD 9.14286
84 5FUS DAO 10.453
85 3NRZ FAD 10.4918
86 5IVX ARG GLY PRO GLY ARG ALA PHE VAL THR ILE 11.3402
87 4USQ FAD 13.2964
88 3QJ4 FAD 15.2047
Pocket No.: 8; Query (leader) PDB : 6F5W; Ligand: KG1; Similar sites found with APoc: 138
This union binding pocket(no: 8) in the query (biounit: 6f5w.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 5USZ SKE 0.692042
2 5W7R SAH 1.08401
3 5W7R 9Z7 1.08401
4 4OBW SAM 1.16732
5 1RLZ NAD 1.35501
6 2ZYJ PGU 1.35501
7 3CIF G3H 1.35501
8 3QXY SAM 1.62602
9 2B9H ADP 1.69972
10 2B9J ADP 1.69972
11 6B92 SAH 1.70068
12 3SJU NDP 1.79211
13 1PZ1 NAP 1.8018
14 5K52 OCD 1.88679
15 2AMV BIN 1.89702
16 5GUD CIT 1.89702
17 5GUD NDP 1.89702
18 5GUD 2IT 1.89702
19 1E5Q NDP 1.89702
20 5CJH 522 1.89702
21 2Q2Y MKR 1.90736
22 2Q2Y ADP 1.90736
23 5FFF NAP 1.94553
24 1O5I NAD 2.00803
25 1H74 ILE 2.02703
26 3ZXR P3S 2.16802
27 3ZXR IQ1 2.16802
28 5O7E 9NB 2.16802
29 1HV9 UD1 2.16802
30 4OOE NDP 2.16802
31 4OOE FOM 2.16802
32 5C5T AKG 2.19298
33 5T2U NAP 2.41935
34 2JAP NDP 2.42915
35 2JAH NDP 2.42915
36 3B6O TMP 2.42915
37 3KDN CAP 2.43902
38 5H7K GDP 2.43902
39 5XLX SAH 2.48227
40 3LCV SAM 2.4911
41 2BL9 CP6 2.52101
42 3E85 BSU 2.53165
43 4X7Q 3YR 2.5641
44 5GM1 SAH 2.6936
45 2OEG UPG 2.71003
46 4BI7 PGA 2.72374
47 1TRD PGH 2.8
48 3B20 NAD 2.94985
49 4DP3 NDP 2.98103
50 4DP3 MMV 2.98103
51 4R0M FA5 2.98103
52 1DAK DPU 3.125
53 1DAK ADP 3.125
54 4RF2 NAP 3.30882
55 6F9Q NAD 3.30882
56 1HDG NAD 3.31325
57 2AQX ATP 3.46021
58 3AI7 TPP 3.52304
59 2PHN GDP 3.54331
60 2A9K GDP 3.58744
61 1DSS NAD 3.6036
62 5OBY ANP 3.79404
63 5AHO TLA 3.86905
64 5YJI SAH 3.87324
65 5YJI 8WO 3.87324
66 2PEZ DAT 3.91061
67 2PEZ GGZ 3.91061
68 4LH7 NMN 4.02477
69 3OZ2 FAD 4.06504
70 2P3V SRT 4.06504
71 1XVB BHL 4.06504
72 1O8B ABF 4.10959
73 3LOO B4P 4.10959
74 5A8Y VBM 4.12844
75 2ZB3 NDP 4.24929
76 1FFU CDP 4.29448
77 5LW0 AR6 4.329
78 4WHZ 3NL 4.33604
79 5LXT GDP 4.33604
80 2QWO ADP 4.34783
81 3A4V PYR 4.4164
82 3A4V NAD 4.4164
83 2VYN NAD 4.49102
84 5O2D 9HH 4.5
85 1KBI FMN 4.60705
86 4QED NAP 4.83871
87 4EU7 CIT 4.87805
88 4EU7 COA 4.87805
89 3ILR IXD 4.87805
90 3ILR SGN 4.87805
91 3ILR SGN IXD 4.87805
92 2YY8 SAM 4.97512
93 1RPN GDP 5.07463
94 5OE4 3UK 5.14905
95 5ZQY AR6 5.15759
96 1MVN PCO 5.26316
97 4CQM NAP 5.36398
98 4WZA ADP 5.42005
99 2NV4 SAM 5.44218
100 2DFV NAD 5.4755
101 3AIA SAM 5.6872
102 4NTM 2K8 5.78512
103 4NTK ZSP 5.78512
104 6CI9 NAP 5.79151
105 6A46 DCM 5.85938
106 5XET ME8 6.04915
107 3RKR NAP 6.10687
108 1U7Z PMT 6.19469
109 2NZU BG6 6.42857
110 1N2X SAM 6.64452
111 2JFV FLC 6.87285
112 4ZVF GAV 6.97674
113 5AK0 8V1 7.04607
114 5HV0 AKG 7.8341
115 1W6U NAP 7.94702
116 3A2Q ACA ACA 8.11359
117 3NRR D16 8.13008
118 1X1R GDP 8.42697
119 5XNC MTA 8.67209
120 3EFS BTN 9.01288
121 3IA4 NDP 9.25926
122 3QBT GNP 9.28571
123 2FZH DH1 10.1942
124 4AF5 CIT 10.5263
125 2NPX NAD 10.5691
126 3GFB NAD 10.5714
127 4E03 ADP 10.6796
128 2JCB ADP 11
129 4F8L AES 11.0345
130 3SBD GNP 11.7647
131 3BJK CIT 12.4183
132 1Z0N BCD 14.5833
133 4J8O SAH 15.7088
134 2F69 SAH 15.7088
135 1BC5 SAH 16.7286
136 1WAP TRP 17.3333
137 3WDM ADN 17.6245
138 4B9Q ATP 19.2412
Pocket No.: 9; Query (leader) PDB : 6F5W; Ligand: KG1; Similar sites found with APoc: 3
This union binding pocket(no: 9) in the query (biounit: 6f5w.bio1) has 21 residues
No: Leader PDB Ligand Sequence Similarity
1 3IWK NAD 1.89702
2 4Y3O OGA 3.52304
3 2GGX NPJ 10
Pocket No.: 10; Query (leader) PDB : 6F5W; Ligand: KG1; Similar sites found with APoc: 129
This union binding pocket(no: 10) in the query (biounit: 6f5w.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 4R9W NTO None
2 3JQ9 AX1 0.694444
3 4CME KTZ 0.694444
4 3JQ7 DX2 0.694444
5 5K6A 6QT 0.694444
6 4CM4 4NR 0.694444
7 5JDC 6JP 0.694444
8 2FHK MFN 1.01351
9 2EW5 Y12 1.10497
10 3K7S R52 1.11732
11 4FG8 ATP 1.26984
12 4XDY NAI 1.47929
13 1F0X FAD 1.62602
14 4AOA IK2 1.62602
15 3FC2 IBI 1.62602
16 2XVE FAD 1.62602
17 5ZYN SIN 1.62602
18 2IU8 PLM 1.62602
19 2P3T 993 1.71674
20 5KO1 6UY 1.76678
21 3E5A VX6 1.86567
22 1ZSQ PIB 1.89702
23 3SSO SAH 1.89702
24 2JDR L20 2.04678
25 2JDR GLY ARG PRO ARG THR THR SER PHE ALA GLU 2.04678
26 1UTJ ABN 2.06612
27 3GF4 FAD 2.16802
28 3GF4 UPG 2.16802
29 4H1V GNP 2.16802
30 3JZ4 NAP 2.16802
31 4GNI ATP 2.16802
32 2BUP ATP 2.16802
33 2BUP ADP 2.16802
34 4H3Q ANP 2.20994
35 3IB1 IMN 2.31884
36 3HQ9 OXL 2.31884
37 6ALW BMJ 2.43056
38 1ME8 RVP 2.43902
39 3I8P 840 2.43902
40 4O1P ANP 2.43902
41 2C9O ADP 2.43902
42 4H3P ANP 2.43902
43 5VJE GOS 2.51397
44 4L2H AR6 AR6 2.51572
45 2B99 RDL 2.5641
46 1OG1 TAD 2.65487
47 2RGH FAD 2.71003
48 2RGO FAD 2.71003
49 1PGP 6PG 2.71003
50 1WUU ANP 2.71003
51 1GJC 130 2.7668
52 5T8O 76Z 2.86533
53 2BNF UTP 2.90456
54 4A22 TD4 2.90698
55 4MDH NAD 2.99401
56 5IVE 6E8 3.0303
57 3DXY SAM 3.21101
58 5Q0F 9FA 3.27869
59 5WB6 9ZM 3.27869
60 3HMO STU 3.50877
61 6HH6 A3R 3.52304
62 1M0S CIT 3.65297
63 4CVN ADP 3.66492
64 4MSG 2C6 3.68664
65 4O97 NTX 3.73444
66 2AOU CQA 3.76712
67 6ER9 NAP 3.79404
68 1ZGD NAP 3.84615
69 5UR6 8KM 3.8674
70 6H3O FAD 4.06504
71 3VRY B43 4.06504
72 1RM6 PCD 4.06504
73 1ZEM NAD 4.19847
74 2WLT ASP 4.21687
75 1KC7 PPR 4.33604
76 6F3G CJN 4.40678
77 4YNM SAM 4.42478
78 5O96 SAM 4.4898
79 1NHX FTB 4.60705
80 1NHX PEP 4.60705
81 3HBF UDP 4.60705
82 3RK1 ATP 4.64135
83 5EH0 5NW 4.65116
84 6MB9 NMY 4.74453
85 6MB9 COA 4.74453
86 5LKT BCO 4.87805
87 1GVF PGH 4.8951
88 4R38 RBF 5
89 4IDT T28 5.05618
90 2NXW TPP 5.14905
91 1SC6 NAD 5.14905
92 3GLC R5P 5.42373
93 2X6T NAP 5.60224
94 1QPR PPC 5.6338
95 1OSS BEN 5.8296
96 1EB1 ZAL PRO MMO 5.83658
97 2GQS C2R 5.90717
98 4BTI 7R9 6.25
99 1EQ2 NAP 6.45161
100 4RHE FMN 6.69856
101 4REL KMP 6.77507
102 3E4O SIN 6.88525
103 2IV3 UDP 7.01754
104 2XZ9 PYR 7.09877
105 5N8V KZZ 7.24638
106 4ZFL 4NK 7.26496
107 2X61 NGA GAL SIA 7.36434
108 3GQI ACP 7.52212
109 3IE3 GSH 7.6555
110 3IE3 N11 7.6555
111 3B0P FMN 7.71429
112 1G7C 5GP 7.85908
113 2YVJ NAI 8.25688
114 4R4U COA 8.99654
115 2EC9 24X 9.15493
116 5WHU SIA 9.39597
117 4XOQ F42 10.1449
118 2GAG FOA 10.4762
119 5VM6 9EG 10.9489
120 2A2C NG1 12.1951
121 2A2C ADP 12.1951
122 4N9I PCG 12.381
123 5MST FUM 12.4661
124 4HA6 FAD 13.2791
125 4V0K GDP 14.2012
126 2A5F NAD 14.2857
127 1H65 GDP 14.4444
128 2VH6 GSV 14.9254
129 1ZJ6 G3D 16.5775
Pocket No.: 11; Query (leader) PDB : 6F5W; Ligand: KG1; Similar sites found with APoc: 27
This union binding pocket(no: 11) in the query (biounit: 6f5w.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 1CBK ROI None
2 4IDC NDP 1.80723
3 4IDC 1XX 1.80723
4 4X6I 3Y1 2.32558
5 5T79 NDP 2.40964
6 3RS8 ALA TRP LEU PHE GLU ALA 2.43902
7 4L3L 5FI 2.63158
8 4I94 ANP 2.66667
9 2UZ1 TPP 2.71003
10 3PT9 SAH 3.25203
11 5TOW NAI 3.25203
12 5TOW ADN 3.25203
13 2DXU BT5 3.40426
14 3FYH ADP 3.41615
15 1FUT 2GP 3.77358
16 5Y80 IRE 4.05405
17 1KZN CBN 4.39024
18 5WNL STU 5.26316
19 4AX9 N5N 5.83658
20