Receptor
PDB id Resolution Class Description Source Keywords
5ZHO 1.4 Å NON-ENZYME: OTHER HUMAN GROUP C ROTAVIRUS VP8*S RECOGNIZE TYPE A HISTO-BLOOD G ANTIGENS AS LIGANDS HUMAN ROTAVIRUS C GROUP C ROTAVIRUS VP8* GALACTIN-LIKE HISTO-BLOOD GROUP ANVIRAL PROTEIN
Ref.: HUMAN GROUP C ROTAVIRUS VP8*S RECOGNIZE TYPE A HIST GROUP ANTIGENS AS LIGANDS. J. VIROL. V. 92 2018
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GLA FUC A2G B:1;
 Valid;
 none;
 submit data
n/a n/a
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5ZHO 1.4 Å NON-ENZYME: OTHER HUMAN GROUP C ROTAVIRUS VP8*S RECOGNIZE TYPE A HISTO-BLOOD G ANTIGENS AS LIGANDS HUMAN ROTAVIRUS C GROUP C ROTAVIRUS VP8* GALACTIN-LIKE HISTO-BLOOD GROUP ANVIRAL PROTEIN
Ref.: HUMAN GROUP C ROTAVIRUS VP8*S RECOGNIZE TYPE A HIST GROUP ANTIGENS AS LIGANDS. J. VIROL. V. 92 2018
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1610 families.
1 5ZHO - GLA FUC A2G n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1331 families.
1 5ZHO - GLA FUC A2G n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1144 families.
1 5ZHO - GLA FUC A2G n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: GLA FUC A2G; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: GLA FUC A2G; Similar ligands found: 8
No: Ligand Similarity coefficient
1 GLA FUC A2G 1.0000
2 GAL FUC A2G 0.9651
3 GAL FUC NGA 0.9651
4 GL0 FUC A2G 0.9651
5 A2G GAL FUC 0.9651
6 GLA FUC GLA 0.9358
7 GAL FUC GLA 0.9205
8 GAL FUC GAL 0.9161
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5ZHO; Ligand: GLA FUC A2G; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 5zho.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
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