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Receptor
PDB id Resolution Class Description Source Keywords
5ZBL 2.3 Å EC: 3.2.2.- CRYSTAL STRCUTURE OF TYPE-I LOG FROM CORYNEBACTERIUM GLUTAMI COMPLEX WITH AMP CORYNEBACTERIUM GLUTAMICUM (STRAIN ATCDSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) HYDROLASE
Ref.: STRUCTURAL INSIGHT INTO MOLECULAR MECHANISM OF CYTO ACTIVATING PROTEIN FROM PSEUDOMONAS AERUGINOSA PAO1 ENVIRON. MICROBIOL. V. 20 3214 2018
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
PO4 B:305;
A:303;
Invalid;
Invalid;
none;
none;
submit data
94.971 O4 P [O-]P...
EDO B:301;
A:301;
B:302;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
62.068 C2 H6 O2 C(CO)...
GOL B:303;
C:302;
A:302;
B:304;
D:302;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
SO4 A:304;
D:303;
B:307;
B:306;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
AMP D:301;
C:301;
Valid;
Valid;
none;
none;
submit data
347.221 C10 H14 N5 O7 P c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5ZBL 2.3 Å EC: 3.2.2.- CRYSTAL STRCUTURE OF TYPE-I LOG FROM CORYNEBACTERIUM GLUTAMI COMPLEX WITH AMP CORYNEBACTERIUM GLUTAMICUM (STRAIN ATCDSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) HYDROLASE
Ref.: STRUCTURAL INSIGHT INTO MOLECULAR MECHANISM OF CYTO ACTIVATING PROTEIN FROM PSEUDOMONAS AERUGINOSA PAO1 ENVIRON. MICROBIOL. V. 20 3214 2018
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 9 families.
1 5ZBL - AMP C10 H14 N5 O7 P c1nc(c2c(n....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 8 families.
1 5ZBL - AMP C10 H14 N5 O7 P c1nc(c2c(n....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 6 families.
1 5ZBK - AMP C10 H14 N5 O7 P c1nc(c2c(n....
2 5ZBL - AMP C10 H14 N5 O7 P c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: AMP; Similar ligands found: 395
No: Ligand ECFP6 Tc MDL keys Tc
1 A 1 1
2 AMP 1 1
3 A2D 0.833333 0.943662
4 ABM 0.833333 0.943662
5 ADP 0.823529 0.971429
6 A12 0.808824 0.931507
7 AP2 0.808824 0.931507
8 BA3 0.808824 0.943662
9 SRA 0.80303 0.944444
10 AP5 0.797101 0.943662
11 B4P 0.797101 0.943662
12 HEJ 0.788732 0.971429
13 ATP 0.788732 0.971429
14 AT4 0.785714 0.931507
15 AN2 0.785714 0.957747
16 5FA 0.777778 0.971429
17 AQP 0.777778 0.971429
18 APC 0.777778 0.931507
19 CA0 0.774648 0.917808
20 M33 0.774648 0.930556
21 AU1 0.774648 0.944444
22 ADX 0.774648 0.848101
23 ACP 0.763889 0.944444
24 50T 0.763889 0.957747
25 25A 0.75641 0.971429
26 AR6 0.753425 0.943662
27 PRX 0.753425 0.917808
28 APR 0.753425 0.943662
29 ACQ 0.746667 0.944444
30 T99 0.746667 0.931507
31 TAT 0.746667 0.931507
32 SAP 0.743243 0.918919
33 AD9 0.743243 0.944444
34 AGS 0.743243 0.918919
35 RBY 0.743243 0.905405
36 ADV 0.743243 0.905405
37 ANP 0.723684 0.944444
38 ADP PO3 0.72 0.942857
39 6YZ 0.717949 0.944444
40 5AL 0.714286 0.930556
41 SON 0.712329 0.931507
42 LMS 0.710145 0.825
43 RAB 0.709677 0.842857
44 XYA 0.709677 0.842857
45 ADN 0.709677 0.842857
46 ATF 0.705128 0.931507
47 GAP 0.701299 0.891892
48 A22 0.7 0.957747
49 SRP 0.696203 0.905405
50 7D5 0.691176 0.902778
51 A3P 0.684932 0.971014
52 A2P 0.684932 0.956522
53 ADP ALF 0.683544 0.868421
54 ALF ADP 0.683544 0.868421
55 ADQ 0.682927 0.917808
56 MAP 0.679012 0.918919
57 ADP VO4 0.675 0.930556
58 VO4 ADP 0.675 0.930556
59 OOB 0.670732 0.930556
60 9ZA 0.670732 0.906667
61 8QN 0.670732 0.930556
62 5SV 0.670732 0.87013
63 9ZD 0.670732 0.906667
64 PTJ 0.670588 0.894737
65 AOC 0.666667 0.84507
66 PAJ 0.662651 0.858974
67 4AD 0.662651 0.893333
68 A3R 0.662651 0.881579
69 A1R 0.662651 0.881579
70 AMO 0.662651 0.905405
71 5N5 0.661538 0.816901
72 DAL AMP 0.658537 0.90411
73 IMO 0.657534 0.928571
74 AHX 0.654762 0.87013
75 00A 0.654762 0.881579
76 DLL 0.654762 0.930556
77 5AS 0.653333 0.776471
78 A4D 0.651515 0.816901
79 5CD 0.651515 0.828571
80 9X8 0.647059 0.893333
81 OAD 0.647059 0.917808
82 3UK 0.647059 0.917808
83 ADP BMA 0.647059 0.891892
84 25L 0.643678 0.957747
85 PR8 0.639535 0.848101
86 WAQ 0.639535 0.881579
87 LAD 0.639535 0.858974
88 B5V 0.639535 0.905405
89 DTA 0.637681 0.808219
90 V3L 0.6375 0.971429
91 3DH 0.633803 0.794521
92 BIS 0.632184 0.906667
93 ME8 0.632184 0.8375
94 3OD 0.632184 0.917808
95 FYA 0.632184 0.930556
96 NB8 0.632184 0.87013
97 1ZZ 0.632184 0.8375
98 TXA 0.632184 0.905405
99 MTA 0.628571 0.794521
100 3AM 0.625 0.956522
101 EP4 0.623188 0.773333
102 A A 0.62069 0.971429
103 9SN 0.617977 0.87013
104 M2T 0.614286 0.753247
105 JB6 0.613636 0.881579
106 YAP 0.611111 0.893333
107 B5Y 0.611111 0.893333
108 FA5 0.611111 0.905405
109 B5M 0.611111 0.893333
110 MYR AMP 0.606742 0.814815
111 G5A 0.604938 0.776471
112 XAH 0.604396 0.8375
113 4UV 0.597826 0.893333
114 71V 0.597403 0.906667
115 ATP A A A 0.593407 0.929577
116 PAP 0.592593 0.957143
117 G3A 0.591398 0.894737
118 2AM 0.589041 0.942857
119 5X8 0.5875 0.783784
120 6RE 0.586667 0.779221
121 6C6 0.585366 0.905405
122 AFH 0.585106 0.858974
123 4UU 0.585106 0.893333
124 G5P 0.585106 0.894737
125 GA7 0.585106 0.905405
126 7D3 0.584416 0.878378
127 A5A 0.583333 0.804878
128 TSB 0.581395 0.795181
129 AMP DBH 0.580645 0.891892
130 TYR AMP 0.580645 0.868421
131 2A5 0.580247 0.891892
132 DQV 0.578947 0.930556
133 DSH 0.578947 0.74359
134 GTA 0.578947 0.860759
135 TAD 0.578947 0.858974
136 6IA 0.578313 0.858974
137 SSA 0.576471 0.776471
138 AMZ 0.575342 0.888889
139 C2R 0.575342 0.876712
140 PGS 0.575 0.857143
141 7D4 0.575 0.878378
142 ZAS 0.573333 0.786667
143 ATR 0.573171 0.942857
144 LAQ 0.572917 0.8375
145 AAM 0.571429 1
146 J7C 0.571429 0.789474
147 A3N 0.571429 0.783784
148 PPS 0.571429 0.848101
149 AIR 0.571429 0.927536
150 52H 0.569767 0.776471
151 54H 0.569767 0.785714
152 VMS 0.569767 0.785714
153 AR6 AR6 0.568421 0.916667
154 ARG AMP 0.568421 0.82716
155 7MD 0.568421 0.8375
156 YLP 0.56701 0.817073
157 48N 0.56701 0.87013
158 OVE 0.565789 0.90411
159 UPA 0.565657 0.881579
160 2SA 0.564706 0.905405
161 S4M 0.564103 0.682353
162 5CA 0.563218 0.776471
163 53H 0.563218 0.776471
164 8X1 0.563218 0.75
165 UP5 0.561224 0.893333
166 NAI 0.561224 0.881579
167 6V0 0.561224 0.87013
168 NAX 0.561224 0.848101
169 4UW 0.561224 0.858974
170 DND 0.561224 0.905405
171 TXD 0.561224 0.881579
172 NXX 0.561224 0.905405
173 NIA 0.56 0.820513
174 D5M 0.558442 0.902778
175 DA 0.558442 0.902778
176 MAO 0.556962 0.777778
177 AHZ 0.556701 0.814815
178 OMR 0.555556 0.82716
179 ITT 0.555556 0.915493
180 TYM 0.555556 0.905405
181 TXE 0.555556 0.881579
182 5AD 0.552239 0.768116
183 A2R 0.551724 0.957747
184 LPA AMP 0.55102 0.814815
185 DSZ 0.550562 0.776471
186 NSS 0.550562 0.776471
187 LSS 0.550562 0.758621
188 AP0 0.55 0.87013
189 YLC 0.55 0.8375
190 4TC 0.55 0.87013
191 YLB 0.55 0.817073
192 P5A 0.549451 0.741573
193 139 0.54902 0.848101
194 A4P 0.544554 0.819277
195 NVA LMS 0.544444 0.75
196 GJV 0.544304 0.769231
197 7D7 0.544118 0.763889
198 9K8 0.543478 0.711111
199 A7D 0.54321 0.797297
200 AF3 ADP 3PG 0.54 0.835443
201 6K6 0.539326 0.957143
202 IOT 0.539216 0.829268
203 A3G 0.538462 0.797297
204 LEU LMS 0.538462 0.75
205 A5D 0.535714 0.808219
206 7MC 0.534653 0.817073
207 T5A 0.533981 0.817073
208 ADJ 0.533981 0.82716
209 YLA 0.533981 0.817073
210 GSU 0.532609 0.776471
211 KAA 0.532609 0.75
212 7RA 0.531646 0.985507
213 SFG 0.53012 0.77027
214 SAH 0.529412 0.763158
215 HFD 0.529412 0.918919
216 AYB 0.528846 0.807229
217 CNA 0.528846 0.905405
218 N6P 0.527473 0.942029
219 8BR 0.525 0.931507
220 F2R 0.52381 0.839506
221 80F 0.523364 0.817073
222 Y3J 0.521127 0.746479
223 YSA 0.520833 0.776471
224 7RP 0.518987 0.955882
225 BTX 0.518868 0.839506
226 NAD 0.518868 0.930556
227 COD 0.518868 0.788235
228 G A A A 0.518868 0.87013
229 MHZ 0.518072 0.714286
230 SA8 0.517647 0.725
231 6AD 0.517241 0.883117
232 DZD 0.514019 0.858974
233 BT5 0.514019 0.829268
234 RMB 0.5125 0.898551
235 SAI 0.511628 0.753247
236 AV2 0.511364 0.890411
237 8PZ 0.510417 0.776471
238 A3D 0.509259 0.917808
239 A3S 0.506024 0.808219
240 3AT 0.505747 0.943662
241 SAM 0.505747 0.707317
242 SMM 0.505618 0.702381
243 NA7 0.505376 0.931507
244 4TA 0.504673 0.804878
245 AMP NAD 0.504673 0.90411
246 EEM 0.5 0.707317
247 G 0.5 0.905405
248 NEC 0.5 0.743243
249 5GP 0.5 0.905405
250 AAT 0.5 0.725
251 YLY 0.495495 0.807229
252 M24 0.495495 0.848101
253 7C5 0.494949 0.815789
254 DAT 0.494118 0.878378
255 A3T 0.494118 0.819444
256 P2P 0.493827 0.928571
257 FAI 0.493827 0.888889
258 1RB 0.493671 0.911765
259 NAE 0.491071 0.893333
260 U A 0.490909 0.906667
261 NAJ PZO 0.490909 0.846154
262 A G 0.490741 0.881579
263 TM1 0.489583 0.771084
264 A A A 0.489362 0.90411
265 A6D 0.489362 0.740741
266 PO4 PO4 A A A A PO4 0.489362 0.901408
267 S7M 0.488889 0.707317
268 DTP 0.488636 0.878378
269 RBZ 0.4875 0.873239
270 101 0.4875 0.902778
271 EAD 0.486957 0.848101
272 NAQ 0.486726 0.87013
273 U A G G 0.486239 0.881579
274 4YB 0.485149 0.758621
275 NDE 0.483051 0.931507
276 ZID 0.482456 0.917808
277 N0B 0.482456 0.817073
278 WSA 0.480769 0.785714
279 RGT 0.479592 0.931507
280 ARU 0.478723 0.835443
281 GGZ 0.478261 0.8
282 JLN 0.47561 0.863014
283 ANZ 0.475248 0.820513
284 QQY 0.475 0.837838
285 ACK 0.475 0.885714
286 NAJ PYZ 0.473684 0.804878
287 S8M 0.473118 0.779221
288 GEK 0.473118 0.734177
289 AVV 0.473118 0.87013
290 3AD 0.472973 0.828571
291 A U 0.471698 0.868421
292 P1H 0.470588 0.82716
293 0UM 0.468085 0.716049
294 RVP 0.467532 0.847222
295 649 0.466667 0.741573
296 Z5A 0.465517 0.776471
297 PMO 0.464286 0.873239
298 SXZ 0.463918 0.707317
299 62X 0.463158 0.682353
300 QQX 0.4625 0.826667
301 8Q2 0.462264 0.75
302 2VA 0.45977 0.797297
303 IMP 0.458824 0.90411
304 K15 0.458333 0.698795
305 CC5 0.458333 0.84058
306 AS 0.457831 0.855263
307 DDS 0.455556 0.851351
308 V1N 0.455446 0.943662
309 NJP 0.454545 0.918919
310 7DD 0.453488 0.957143
311 93A 0.453488 0.804878
312 G7M 0.453488 0.87013
313 3L1 0.453333 0.77027
314 3D1 0.453333 0.77027
315 EO7 0.452381 0.785714
316 NDC 0.45082 0.87013
317 FB0 0.45082 0.781609
318 0WD 0.45045 0.894737
319 NVA 2AD 0.449438 0.75641
320 26A 0.447368 0.76
321 2FA 0.447368 0.810811
322 2BA 0.447059 0.914286
323 CMP 0.447059 0.927536
324 D3Y 0.446809 0.786667
325 KB1 0.444444 0.716049
326 APU 0.444444 0.893333
327 VRT 0.444444 0.766234
328 SO8 0.444444 0.786667
329 FDA 0.443548 0.809524
330 PUA 0.443478 0.858974
331 ODP 0.441441 0.883117
332 6FA 0.44 0.817073
333 103 0.439024 0.861111
334 RP1 0.439024 0.864865
335 SP1 0.439024 0.864865
336 3NZ 0.438776 0.779221
337 A C A C 0.438596 0.846154
338 7DT 0.438202 0.957143
339 NDP 0.436364 0.894737
340 NPW 0.436364 0.860759
341 MTP 0.434211 0.727273
342 FAS 0.433071 0.82716
343 SFD 0.433071 0.712766
344 FAD 0.433071 0.82716
345 IRN 0.432432 0.867647
346 ZZB 0.432432 0.792683
347 TXP 0.432432 0.894737
348 NZQ 0.432432 0.883117
349 62F 0.430769 0.8375
350 FNK 0.430769 0.781609
351 128 0.429907 0.752941
352 1DA 0.428571 0.842857
353 6MD 0.428571 0.805556
354 PAX 0.428571 0.82716
355 SLU 0.426087 0.767442
356 XNP 0.424779 0.848101
357 12D 0.424528 0.761905
358 5F1 0.423077 0.72973
359 ETB 0.422414 0.809524
360 DCA 0.422414 0.8
361 F0P 0.422018 0.725
362 WMP 0.421053 0.864865
363 GUO 0.421053 0.864865
364 FAY 0.416667 0.8375
365 38Y 0.415929 0.804878
366 5J9 0.415842 0.728395
367 COA 0.415254 0.8
368 0T1 0.415254 0.8
369 KH3 0.415094 0.690476
370 U A C C 0.413793 0.857143
371 N01 0.413793 0.90411
372 FMP 0.413793 0.871429
373 RFL 0.413534 0.797619
374 NMN AMP PO4 0.412281 0.868421
375 GP2 0.408602 0.858974
376 GDP 0.408602 0.893333
377 NAP 0.408333 0.944444
378 NOC 0.407895 0.760563
379 2ER 0.405941 0.831169
380 1PR 0.405941 0.820513
381 P5F 0.405797 0.8
382 CAO 0.404959 0.772727
383 TAP 0.404959 0.906667
384 30N 0.404959 0.731183
385 COS 0.404959 0.781609
386 AMX 0.404959 0.809524
387 XMP 0.402299 0.891892
388 G2P 0.402062 0.858974
389 APC G U 0.401709 0.833333
390 U A A U 0.401639 0.906667
391 CMX 0.401639 0.8
392 NA0 0.401639 0.931507
393 SCO 0.401639 0.8
394 9JJ 0.40146 0.8375
395 F2N 0.4 0.790698
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5ZBL; Ligand: AMP; Similar sites found with APoc: 192
This union binding pocket(no: 1) in the query (biounit: 5zbl.bio2) has 21 residues
No: Leader PDB Ligand Sequence Similarity
1 1XZ3 ICF None
2 1HBK MYR None
3 6BR8 6OU None
4 4WG0 CHD None
5 2WOR 2AN None
6 1UO5 PIH None
7 2NU5 NAG None
8 2HYQ MAN MAN None
9 2NUO BGC None
10 4RJD TFP None
11 4XCP PLM 1.17647
12 3HCH RSM 1.36986
13 6BMS POV 1.47783
14 1T26 NAI 1.97044
15 1T26 GBD 1.97044
16 2XRH NIO 2
17 3QMN A3P 2.32558
18 2J5V PCA 2.46305
19 5NGZ 2BG 2.46305
20 4QWT ACD 2.46305
21 5NM7 GLY 2.95567
22 4UCC ZKW 2.95567
23 4Q0A 4OA 2.95567
24 4OKS 2T9 2.95567
25 2C6Q NDP 2.95567
26 2C6Q IMP 2.95567
27 2DT5 NAD 2.95567
28 5AR0 GB8 2.95567
29 1JUV NDP 3.10881
30 4OHB 5HM 3.15789
31 4NTO 1PW 3.44828
32 3SQP FAD 3.44828
33 2HK9 ATR 3.44828
34 4EIL NDP 3.44828
35 5ND5 TPP 3.44828
36 3MKH FAD 3.44828
37 5LXT GDP 3.4965
38 3RYC GTP 3.4965
39 4JEM C5P 3.52941
40 1DTL BEP 3.72671
41 1U72 MTX 3.76344
42 1U72 NDP 3.76344
43 5A96 GTP 3.94089
44 4WBD CIT 3.94089
45 4DE3 DN8 3.94089
46 4N6H EJ4 3.94089
47 1NF8 BOG 3.94089
48 2IYA UDP 3.94089
49 1EWF PC1 3.94089
50 1GPE FAD 3.94089
51 4MIG G3F 3.94089
52 2YVF NAD 3.94089
53 1M2Z BOG 4.4335
54 1ZDU P3A 4.4335
55 1YOK P6L 4.4335
56 3ITJ CIT 4.4335
57 4C3Y ANB 4.4335
58 4C3Y FAD 4.4335
59 3Q9T FAY 4.4335
60 5W6Y TRP 4.4335
61 3I6B KDO 4.44444
62 3KJS NAP 4.92611
63 4I4B NAD 4.92611
64 5FPN KYD 4.92611
65 2IYF UDP 4.92611
66 5EHS 5OY 4.92611
67 5EHS 2JJ 4.92611
68 5MIT NAP 4.92611
69 5MIT FAD 4.92611
70 4FC7 NAP 4.92611
71 4FC7 COA 4.92611
72 1RRC ADP 4.92611
73 3B9Z CO2 4.92611
74 6CS8 F9Y 4.9505
75 4FHT DHB 5.09554
76 2HHP FLC 5.41872
77 2VZZ SCA 5.41872
78 4P8K FAD 5.41872
79 4P8K 38C 5.41872
80 1EP2 ORO 5.41872
81 3KAL HGS 5.41872
82 1NAA 6FA 5.41872
83 1NAA ABL 5.41872
84 4LAE 1VM 5.41872
85 4LAE NAP 5.41872
86 1OYJ GSH 5.41872
87 4DP3 MMV 5.41872
88 4DP3 NDP 5.41872
89 5TVI MYR 5.43478
90 5TVI O8N 5.43478
91 4ZES MMA 5.44218
92 5XDT MB3 5.84416
93 5EXW 7DT 5.91133
94 2QE4 JJ3 5.91133
95 3G5N PB2 5.91133
96 2BHZ MAL 5.91133
97 2NV2 GLN 5.91133
98 5YS9 FAD 5.91133
99 2XCM ADP 5.91133
100 1FWV SGA MAG FUC 5.97015
101 4TUZ 36J 6.40394
102 4TV1 36M 6.40394
103 1YBH P22 6.40394
104 4MG8 27J 6.40394
105 4JOB TLA 6.40394
106 1TL2 NDG 6.40394
107 3KP6 SAL 6.62252
108 3W5N RAM 6.89655
109 1OFL ASG GCD 6.89655
110 3FAL REA 6.89655
111 4Y9J FAD 6.89655
112 2AWN ADP 6.89655
113 4Y9J UCC 6.89655
114 2WPF FAD 7.38916
115 2WPF WPF 7.38916
116 3IA4 NDP 7.38916
117 2BUP ADP 7.38916
118 2BUP ATP 7.38916
119 4M0R 644 7.38916
120 4YDX TCE 7.46269
121 2ZFZ ARG 7.59494
122 6F5W KG1 7.88177
123 5ECP MET 7.88177
124 5ECP ATP 7.88177
125 2QPU QPS 7.88177
126 3RS8 APR 7.88177
127 5ECP JAA 7.88177
128 2BCG GER 7.88177
129 4XT8 TMQ 7.88177
130 4XT8 NAP 7.88177
131 3RDE OYP 7.88177
132 2QPU QPU 7.88177
133 2CB8 MYA 8.04598
134 5NNT DPV 8.10811
135 4KVL PLM 8.37438
136 3ZQE DXC 8.37438
137 3B6C SDN 8.37438
138 2YI0 YI0 8.37438
139 1NVM NAD 8.37438
140 4B7P 9UN 8.37438
141 5E5U MLI 8.54271
142 2BL9 NDP 8.82353
143 2QV7 ADP 8.86699
144 5NTP 98E 8.86699
145 4HE2 AMP 8.86699
146 3VET CP 8.86699
147 3VET ADP 8.86699
148 3VET TOY 8.86699
149 4IA6 EIC 9.35961
150 1NYT NAP 9.35961
151 3KC1 2T6 9.85222
152 1LEK GLU GLN TYR LYS PHE TYR SER VAL 10.101
153 5LX9 OLB 10.3448
154 4UP3 NDP 10.3448
155 1RRV TYD 10.3448
156 4X3R 686 10.3448
157 4X1T UDP 10.3448
158 5C2N NAG 10.4167
159 5AZC PGT 10.8374
160 5E70 RCD 10.8374
161 2R5N TPP 10.8374
162 2R5N RP5 10.8374
163 2R5N R5P 10.8374
164 2UW1 GVM 10.8374
165 2HZL PYR 10.9589
166 1TV5 N8E 11.33
167 1T9D P22 11.33
168 5O22 C3R 11.8227
169 6DIO CIT 12.3153
170 2ACV UDP 12.8079
171 1Q9I TEO 12.8079
172 1Q9I FAD 12.8079
173 2D2F ADP 13.7931
174 4AUT FAD 13.7931
175 3OLL EST 14.2857
176 3PFD FDA 14.7783
177 2Q4W FAD 14.7783
178 1PFK ADP 15.2709
179 1XVB 3BR 15.7635
180 5G48 1FL 16.7488
181 4V1F BQ1 17.4419
182 4L1F FAD 20.197
183 3KIF GDL 20.7547
184 3KPE TM3 21.5686
185 5Y9D FAD 22.1675
186 1LNX URI 22.2222
187 3B8I OXL 30.0493
188 5Z84 CHD 31.9149
189 5ZCO CHD 31.9149
190 5W97 CHD 31.9149
191 4OGQ 7PH 44.1176
192 4OGQ UMQ 44.1176
Pocket No.: 2; Query (leader) PDB : 5ZBL; Ligand: AMP; Similar sites found with APoc: 75
This union binding pocket(no: 2) in the query (biounit: 5zbl.bio2) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 2GUD BMA None
2 2HYR BGC GLC None
3 2GUC MAN None
4 2GUD MAN None
5 6FLZ MMA 1.38889
6 5UGW GSH 1.71429
7 2AX9 BHM 1.97044
8 2OX9 GAL NAG FUC 2.14286
9 1JZN BGC GAL 2.22222
10 4M7V RAR 2.28571
11 2FZH DH1 2.46305
12 2CUN 3PG 2.46305
13 2Z3Y F2N 2.95567
14 3QKD HI0 3.31492
15 4WCX ALA 3.44828
16 3KLL MAL 3.44828
17 2VVM FAD 3.44828
18 4G86 BNT 3.94089
19 4ZOH MCN 3.94089
20 3T31 DCQ 3.94089
21 3T31 FAD 3.94089
22 1U70 NDP 3.94089
23 1U70 MTX 3.94089
24 1QF9 C5P 4.12371
25 1QF9 ADP 4.12371
26 1QF9 ALF 4.12371
27 3ETG GLU 4.4335
28 5DXV NAP 4.48718
29 1DR1 HBI 4.7619
30 1DR1 NAP 4.7619
31 1H82 GZZ 4.92611
32 1BZL FAD 4.92611
33 1H82 FAD 4.92611
34 2VCH UDP 4.92611
35 4C5N PXL 4.92611
36 1E8G FCR 4.92611
37 4C5N ACP 4.92611
38 1E8G FAD 4.92611
39 3KJS DQ1 4.92611
40 3QJ4 FAD 4.92611
41 3NOJ PYR 4.92611
42 1RSG FAD 5.41872
43 3NRR NAP 5.41872
44 4RW3 SHV 5.41872
45 3NRR D16 5.41872
46 1J3I NDP 5.41872
47 1J3I WRA 5.41872
48 4PVV HO4 5.55556
49 4HA9 NDP 5.62249
50 5GWE GWM 6.40394
51 5MBX FAD 7.38916
52 5MBX SP5 7.38916
53 1GZ4 ATP 7.38916
54 6GL8 F3Q 7.55814
55 3ZKK XYP XYP XYP XYP 7.88177
56 1R27 MGD 8.37438
57 2BL9 CP6 8.82353
58 5YU3 PRO 8.86699
59 5YU3 NAD 8.86699
60 4MOP 2H5 9.35961
61 1TKB N1T 9.35961
62 1P0F NAP 9.85222
63 5MT9 SRO 10
64 1AOE GW3 10.4167
65 1AOE NDP 10.4167
66 2UUU FAD 11.33
67 2UUU PL3 11.33
68 5ZRR 9J3 11.8227
69 3RG9 NDP 12.8079
70 3RG9 WRA 12.8079
71 5C9P FUC 13.7931
72 1D1G NDP 16.6667
73 5YVR NDP 23.1527
74 4GUS FAD 28.5714
75 4HSU FAD 43.3333
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