Receptor
PDB id Resolution Class Description Source Keywords
5XSP 2.15 Å EC: 7.-.-.- THE CATALYTIC DOMAIN OF GDPP WITH 5'-PAPA STAPHYLOCOCCUS AUREUS PHOSPHODIESTERASE HYDROLASE
Ref.: STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF THE DOMAINS OF GDPP REVEALS A UNIFIED HYDROLYSIS MECHAN THE DHH/DHHA1 PHOSPHODIESTERASE BIOCHEM. J. V. 475 191 2018
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
A A A:703;
B:703;
 Valid;
Valid;
 none;
none;
 submit data
n/a n/a
MN B:701;
B:702;
A:701;
A:702;
 Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
 none;
none;
none;
none;
 submit data
54.938 Mn [Mn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5XSP 2.15 Å EC: 7.-.-.- THE CATALYTIC DOMAIN OF GDPP WITH 5'-PAPA STAPHYLOCOCCUS AUREUS PHOSPHODIESTERASE HYDROLASE
Ref.: STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF THE DOMAINS OF GDPP REVEALS A UNIFIED HYDROLYSIS MECHAN THE DHH/DHHA1 PHOSPHODIESTERASE BIOCHEM. J. V. 475 191 2018
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 319 families.
1 5XSP - A A n/a n/a
2 5XSN - 2BA C20 H24 N10 O12 P2 c1nc(c2c(n....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 271 families.
1 5XSP - A A n/a n/a
2 5XSN - 2BA C20 H24 N10 O12 P2 c1nc(c2c(n....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 223 families.
1 5XSP - A A n/a n/a
2 5XSN - 2BA C20 H24 N10 O12 P2 c1nc(c2c(n....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: A A ; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: A A ; Similar ligands found: 7
No: Ligand Similarity coefficient
1 A A 1.0000
2 G A 0.9846
3 A G 0.9790
4 G G 0.9637
5 C G 0.9142
6 2BA 0.8887
7 C U 0.8729
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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