-->
Receptor
PDB id Resolution Class Description Source Keywords
5XLX 1.97 Å EC: 2.1.1.80 CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF CHER1 CONTAINI PSEUDOMONAS AERUGINOSA (STRAIN ATCC 1522644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 /ORGANISM_TAXID: 208964 SIGNALING METHYLTRANSFERASE TRANSFERASE
Ref.: STRUCTURAL BASIS FOR THE REGULATION OF CHEMOTAXIS B THE PRESENCE OF C-DI-GMP ACTA CRYSTALLOGR D STRUCT V. 73 683 2017 BIOL
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SAH C:301;
A:301;
D:301;
B:301;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
384.411 C14 H20 N6 O5 S c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5XLX 1.97 Å EC: 2.1.1.80 CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF CHER1 CONTAINI PSEUDOMONAS AERUGINOSA (STRAIN ATCC 1522644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 /ORGANISM_TAXID: 208964 SIGNALING METHYLTRANSFERASE TRANSFERASE
Ref.: STRUCTURAL BASIS FOR THE REGULATION OF CHEMOTAXIS B THE PRESENCE OF C-DI-GMP ACTA CRYSTALLOGR D STRUCT V. 73 683 2017 BIOL
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 5 families.
1 5XLX - SAH C14 H20 N6 O5 S c1nc(c2c(n....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 5XLX - SAH C14 H20 N6 O5 S c1nc(c2c(n....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 5FTW - SAH C14 H20 N6 O5 S c1nc(c2c(n....
2 5XLX - SAH C14 H20 N6 O5 S c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SAH; Similar ligands found: 211
No: Ligand ECFP6 Tc MDL keys Tc
1 SAH 1 1
2 5X8 0.759494 0.969697
3 A7D 0.734177 0.926471
4 TT8 0.709302 0.970588
5 DSH 0.692308 0.914286
6 SXZ 0.692308 0.916667
7 DTA 0.666667 0.857143
8 3DH 0.662338 0.869565
9 S8M 0.655556 0.901408
10 SFG 0.635294 0.954545
11 SA8 0.62069 0.915493
12 EEM 0.617977 0.890411
13 MTA 0.615385 0.869565
14 SAI 0.613636 0.955882
15 S7M 0.586957 0.916667
16 36A 0.586538 0.90411
17 K15 0.583333 0.878378
18 ADN 0.573333 0.84058
19 RAB 0.573333 0.84058
20 XYA 0.573333 0.84058
21 62X 0.572917 0.855263
22 5CD 0.571429 0.852941
23 0UM 0.5625 0.876712
24 5N5 0.558442 0.84058
25 A4D 0.551282 0.867647
26 SAM 0.537634 0.916667
27 SMM 0.536842 0.88
28 SSA 0.536842 0.712644
29 KB1 0.534653 0.902778
30 A5D 0.532609 0.857143
31 SIB 0.53125 0.928571
32 EP4 0.530864 0.819444
33 DSZ 0.530612 0.732558
34 GSU 0.53 0.752941
35 A 0.529412 0.763158
36 LMS 0.529412 0.694118
37 AMP 0.529412 0.763158
38 5CA 0.525773 0.712644
39 ME8 0.524752 0.8125
40 M2T 0.52439 0.821918
41 6RE 0.523256 0.824324
42 GJV 0.522727 0.813333
43 AAT 0.515789 0.863014
44 LSS 0.515152 0.696629
45 KAA 0.514852 0.727273
46 J7C 0.511364 0.835616
47 A5A 0.510417 0.697674
48 SON 0.505495 0.805195
49 SRP 0.505155 0.805195
50 F0P 0.504505 0.915493
51 54H 0.5 0.681818
52 VMS 0.5 0.681818
53 ADX 0.5 0.694118
54 CA0 0.5 0.769231
55 AMO 0.5 0.805195
56 5AL 0.5 0.779221
57 KH3 0.5 0.866667
58 NVA LMS 0.49505 0.707865
59 AHX 0.49505 0.753086
60 TSB 0.494949 0.689655
61 53H 0.494949 0.674157
62 G5A 0.494737 0.712644
63 ABM 0.494382 0.74359
64 A2D 0.494382 0.74359
65 ZAS 0.494253 0.808219
66 A6D 0.490196 0.759494
67 8QN 0.49 0.779221
68 GEK 0.49 0.956522
69 GAP 0.489583 0.769231
70 AN2 0.48913 0.734177
71 A3S 0.48913 0.884058
72 S4M 0.488889 0.831169
73 SRA 0.488636 0.746835
74 LAD 0.485437 0.810127
75 52H 0.484848 0.674157
76 A12 0.483516 0.759494
77 BA3 0.483516 0.74359
78 AP2 0.483516 0.759494
79 NEC 0.483146 0.788732
80 AOC 0.483146 0.842857
81 Y3J 0.481481 0.768116
82 VRT 0.479167 0.861111
83 50T 0.478723 0.734177
84 B4P 0.478261 0.74359
85 ADP 0.478261 0.74359
86 5AS 0.478261 0.655556
87 AP5 0.478261 0.74359
88 A3N 0.477778 0.830986
89 YSA 0.476636 0.712644
90 XAH 0.476636 0.768293
91 0XU 0.473684 0.897059
92 AT4 0.473118 0.7375
93 WAQ 0.471154 0.807692
94 NSS 0.470588 0.712644
95 5AD 0.468354 0.791045
96 AU1 0.468085 0.725
97 M33 0.468085 0.734177
98 MAO 0.467391 0.797468
99 TXA 0.466667 0.759494
100 NB8 0.466667 0.775
101 A3G 0.466667 0.871429
102 3AM 0.465909 0.727273
103 DAL AMP 0.465347 0.779221
104 8X1 0.465347 0.707865
105 A3T 0.463158 0.842857
106 ATP 0.463158 0.74359
107 HEJ 0.463158 0.74359
108 ACP 0.463158 0.746835
109 7D7 0.4625 0.785714
110 LEU LMS 0.461538 0.688889
111 9ZA 0.460784 0.740741
112 9ZD 0.460784 0.740741
113 5FA 0.458333 0.74359
114 AQP 0.458333 0.74359
115 AR6 0.458333 0.766234
116 APC 0.458333 0.759494
117 APR 0.458333 0.766234
118 PRX 0.458333 0.746835
119 F2R 0.457627 0.75
120 IOT 0.456897 0.761905
121 4AD 0.456311 0.794872
122 PAJ 0.456311 0.722892
123 WSA 0.45614 0.72093
124 YAP 0.453704 0.794872
125 8PZ 0.453704 0.712644
126 FA5 0.453704 0.805195
127 ADP PO3 0.453608 0.763158
128 ADV 0.453608 0.782051
129 NVA 2AD 0.453608 0.849315
130 SAP 0.453608 0.728395
131 AGS 0.453608 0.728395
132 RBY 0.453608 0.782051
133 AD9 0.453608 0.725
134 PTJ 0.45283 0.731707
135 MHZ 0.452632 0.797468
136 00A 0.451923 0.740741
137 A3P 0.451613 0.74026
138 YLP 0.451327 0.771084
139 7MD 0.45045 0.768293
140 ALF ADP 0.45 0.707317
141 ADP ALF 0.45 0.707317
142 2VA 0.447917 0.819444
143 OOB 0.446602 0.779221
144 ANP 0.444444 0.725
145 T99 0.444444 0.7375
146 ACQ 0.444444 0.746835
147 TAT 0.444444 0.7375
148 P5A 0.443396 0.719101
149 7D5 0.443182 0.708861
150 A1R 0.442308 0.7625
151 YLC 0.439655 0.790123
152 2AM 0.438202 0.717949
153 DLL 0.438095 0.779221
154 ARG AMP 0.4375 0.759036
155 A22 0.436893 0.734177
156 D3Y 0.436893 0.859155
157 ATF 0.435644 0.716049
158 MYR AMP 0.435185 0.746988
159 80F 0.434426 0.75
160 SO8 0.434343 0.808219
161 OAD 0.433962 0.769231
162 3UK 0.433962 0.769231
163 TAD 0.433628 0.765432
164 25A 0.432692 0.74359
165 6YZ 0.431373 0.746835
166 VO4 ADP 0.431373 0.734177
167 ADP VO4 0.431373 0.734177
168 9SN 0.431193 0.731707
169 TYM 0.431034 0.805195
170 B5V 0.429907 0.759494
171 PR8 0.429907 0.8
172 ADQ 0.428571 0.746835
173 YLB 0.42735 0.771084
174 9K8 0.425926 0.67033
175 1ZZ 0.425926 0.746988
176 FYA 0.425926 0.779221
177 3OD 0.425926 0.769231
178 PPS 0.425743 0.674419
179 MAP 0.423077 0.707317
180 A2P 0.421053 0.727273
181 4YB 0.421053 0.735632
182 9X8 0.420561 0.75
183 ADP BMA 0.420561 0.746835
184 TYR AMP 0.419643 0.794872
185 5SV 0.419048 0.731707
186 3NZ 0.416667 0.824324
187 YLA 0.416667 0.771084
188 8Q2 0.415254 0.688889
189 A3R 0.415094 0.7625
190 B5Y 0.414414 0.75
191 B5M 0.414414 0.75
192 48N 0.413793 0.753086
193 LPA AMP 0.413793 0.768293
194 AYB 0.413223 0.761905
195 ACK 0.413043 0.710526
196 QQY 0.413043 0.696203
197 BIS 0.412844 0.719512
198 JB6 0.412844 0.7625
199 PAP 0.41 0.730769
200 DQV 0.408696 0.75641
201 OVE 0.408602 0.7125
202 AMP DBH 0.40708 0.746835
203 4UV 0.40708 0.75
204 3AD 0.406977 0.852941
205 AF3 ADP 3PG 0.40678 0.743902
206 OMR 0.40678 0.738095
207 LAQ 0.405172 0.768293
208 A A 0.40367 0.74359
209 7C5 0.403509 0.789474
210 7MC 0.403361 0.75
211 4UU 0.4 0.75
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5XLX; Ligand: SAH; Similar sites found with APoc: 269
This union binding pocket(no: 1) in the query (biounit: 5xlx.bio1) has 21 residues
No: Leader PDB Ligand Sequence Similarity
1 2YY7 NAD None
2 3GU3 SAH 1.76056
3 5EEH SAH 1.77305
4 5EEH P9P 1.77305
5 5KOK S9T 1.77305
6 5KOK R9T 1.77305
7 6ECW SAH 1.77305
8 5KOK SAH 1.77305
9 2ZIF SAM 1.77305
10 1RJW ETF 1.77305
11 6F9Q NAD 1.83824
12 3H2B SAH 1.97044
13 2VDV SAM 2.03252
14 3I53 SAH 2.10843
15 1FP2 HMO 2.12766
16 1FP2 SAH 2.12766
17 3ITJ CIT 2.12766
18 1R6T TYM 2.12766
19 5DLY 5D7 2.25564
20 5DLY SAH 2.25564
21 2DTX BMA 2.27273
22 3OU2 SAH 2.29358
23 4OBW SAM 2.33463
24 3MB5 SAM 2.35294
25 5T2U NAP 2.41935
26 3GWZ SAH 2.48227
27 3GXO SAH 2.48227
28 6GKV SAH 2.48227
29 6D6Y SAH 2.48227
30 1KYZ SAH 2.48227
31 5GM1 SAH 2.48227
32 3VSE SAH 2.48227
33 5F2K SAH 2.48227
34 5F2K OCA 2.48227
35 4YAC NAI 2.48227
36 1KYZ FER 2.48227
37 6B92 SAH 2.48227
38 4Y30 SAH 2.48227
39 4Y30 49L 2.48227
40 3WMX NAD 2.48227
41 1UWK NAD 2.48227
42 1UWK URO 2.48227
43 2FK8 SAM 2.48227
44 1NV8 SAM 2.48227
45 1NV8 MEQ 2.48227
46 5ZW3 SAH 2.48227
47 5HJM MTA 2.48227
48 4POO SAM 2.5
49 2BGM NAJ 2.51799
50 3PFG TLO 2.6616
51 3PFG SAM 2.6616
52 1Q0S SAH 2.7027
53 6GFK SAH 2.78884
54 2PXX SAH 2.7907
55 1O5I NAD 2.81124
56 4M73 SAH 2.83688
57 4M73 M72 2.83688
58 6B3A SAM 2.83688
59 1ZGA SAH 2.83688
60 5Z75 NAD 2.83688
61 4KIB SAH 2.83688
62 3A4V NAD 2.83688
63 3A4V PYR 2.83688
64 1KPG SAH 2.83688
65 5X62 SAH 2.83688
66 1KPH SAH 2.83688
67 5VLQ ANP 2.83688
68 1L1E SAH 2.83688
69 1XG5 NAP 2.86738
70 1UAY ADN 2.89256
71 1AE1 NAP 2.9304
72 3WDM ADN 3.06513
73 1RJD SAM 3.19149
74 3O7W SAM 3.19149
75 3P9C SAH 3.19149
76 2EJU SAH 3.19149
77 3GRU AMP 3.19149
78 4BLW SAH 3.19149
79 4BLW AMP 3.19149
80 3S1S SAH 3.19149
81 3BMN AX3 3.19149
82 5BSZ SAH 3.2
83 4NBT NAD 3.33333
84 3A28 NAD 3.48837
85 1R18 SAH 3.52423
86 4AZW SAM 3.5461
87 2JJQ SAH 3.5461
88 6BQ6 TER 3.5461
89 1I9G SAM 3.57143
90 3G89 SAM 3.61446
91 3BXO SAM 3.76569
92 6ECT SAM 3.90071
93 1IM8 SAI 3.90071
94 4YAG NAI 3.90071
95 5U19 SAH 3.90071
96 5U19 827 3.90071
97 6FDF SAH 3.90071
98 4CQM NAP 4.09836
99 3T7S SAM 4.10448
100 5BW4 SAM 4.11985
101 3GDH SAH 4.14938
102 1G60 SAM 4.23077
103 5W7K SAH 4.25532
104 3LST SAH 4.25532
105 2AOT SAH 4.25532
106 6ECU SAH 4.25532
107 6ARJ SAH 4.25532
108 6ARJ BW4 4.25532
109 4X60 SFG 4.25532
110 4X60 3XV 4.25532
111 4GQB 0XU 4.25532
112 1V59 NAD 4.25532
113 3B8I OXL 4.25532
114 3X0D SAH 4.25532
115 5DM1 5D7 4.49438
116 5DM1 SAH 4.49438
117 4DDS 0J7 4.56274
118 3MQ2 SAH 4.58716
119 3DXY SAM 4.58716
120 3TKY SAH 4.60993
121 4C4A SAH 4.60993
122 2ZXI FAD 4.60993
123 1N2X SAM 4.60993
124 2AE2 PTO 4.61538
125 3BGD SAH 4.61538
126 2AE2 NAP 4.61538
127 3BGD PM6 4.61538
128 2ZFU SAH 4.65116
129 2PWY SAH 4.65116
130 3EGI ADP 4.85437
131 6BT6 3GK 4.94297
132 5YJF SAH 4.96454
133 5YJF 8WO 4.96454
134 1SQF SAM 4.96454
135 4ONQ SFG 4.96454
136 1JQ3 AAT 4.96454
137 2HNK SAH 5.02092
138 5EJ2 NAD 5.19481
139 3ABI NAD 5.20548
140 4QTU SAM 5.28846
141 5XNC MTA 5.31915
142 1G55 SAH 5.31915
143 2AG5 NAD 5.31915
144 3ELW GP3 5.33333
145 3ELW SAM 5.33333
146 3VPD CIT 5.33808
147 1XTP SAI 5.51181
148 3NDJ JHZ 5.67376
149 3NDJ SAH 5.67376
150 2OBF SAH 5.67376
151 2OBF F83 5.67376
152 4DCM SAM 5.67376
153 4DMG SAM 5.67376
154 1WG8 SAM 5.67376
155 5CQG 55C 5.67376
156 3RKR NAP 5.72519
157 3P2E SAH 5.77778
158 2WA2 SAM 5.7971
159 5FFF NAP 5.83658
160 3HVJ 705 5.88235
161 5YJI 8WO 6.02837
162 5YJI SAH 6.02837
163 1YXM ADE 6.02837
164 4KRG SAH 6.02837
165 2UYQ SAM 6.02837
166 1DL5 SAH 6.02837
167 3GCZ SAM 6.02837
168 3EVF SAH 6.13718
169 3EVF GTA 6.13718
170 5YW5 ADE 6.14525
171 1NFQ NAI 6.15385
172 5ULP KB1 6.34328
173 5CUQ NSC 6.36704
174 2GN4 UD1 6.38298
175 4NEC SAH 6.43939
176 4M38 SAH 6.70554
177 3FPF TNA 6.73759
178 3FPF MTA 6.73759
179 2CFC NAD 6.8
180 3KO0 TFP 6.93069
181 3FZG SAM 7
182 2ZWA SAH 7.0922
183 3O03 NAP 7.0922
184 4E70 N7I 7.0922
185 5MGZ SAH 7.20339
186 4NTO 1PW 7.24638
187 1FP1 SAH 7.44681
188 5THY SAH 7.44681
189 5THZ SAH 7.44681
190 4PIO AVI 7.44681
191 4PIO SAH 7.44681
192 4Y9D NAI 7.44681
193 4NBU NAI 7.6
194 1TPY SAH 7.66551
195 1QAN SAH 7.78689
196 1JQD SAH 7.80142
197 1JQD HSM 7.80142
198 5ERG SAM 7.80142
199 3JWH SAH 7.8341
200 1VE3 SAM 7.92952
201 5ICE SAH 7.95455
202 5ICE 2H4 7.95455
203 5JE0 SAH 8.09717
204 5JE0 AZ8 8.09717
205 6CI9 NAP 8.10811
206 4RVG TYD 8.51064
207 4RVG SAM 8.51064
208 3G2O SAM 8.51064
209 6C8R SAH 8.51064
210 6C8R EQV 8.51064
211 1JG3 ADN 8.51064
212 2JHP SAH 8.51064
213 5M58 SAH 8.69565
214 4IWN GEK 8.73362
215 1I1N SAH 8.84956
216 4A6D SAM 8.86525
217 5E1M SAH 9.12863
218 5E1M PRO PRO LYS ARG ILE ALA 9.12863
219 5F8F SFG 9.21986
220 5FA8 SAM 9.31677
221 5JGL SAM 9.57447
222 3LCV SAM 9.60854
223 2RH4 EMO 9.74729
224 2A14 SAH 9.88593
225 6C5B SAH 9.92908
226 5DNK SAH 9.92908
227 1KTG AMP 10.1449
228 1QZZ SAM 10.2837
229 1XDS SAM 10.2837
230 4XUC 43G 10.5505
231 4XUC SAM 10.5505
232 4PNE SAH 10.6383
233 5T67 JHZ 10.6383
234 5T67 SAH 10.6383
235 1Z3C SA8 10.6383
236 5UFN SAH 10.9244
237 5WP4 SAH 10.9929
238 5E9W SAH 10.9929
239 5E8J SAH 10.9929
240 3Q87 SAM 11.2
241 4R6W PC 11.2403
242 4R6W SAH 11.2403
243 5W7M SAH 11.3475
244 2EFJ SAH 11.3475
245 5WP5 SAH 11.3475
246 3FUU ADN 11.4391
247 6F5Z SAH 11.4754
248 2XVM SAH 11.5578
249 3EVG SAH 11.6364
250 2EG5 SAH 11.7021
251 5MW4 5JU 12.0567
252 3FRH SAH 12.6482
253 6DUB SAH 13.0631
254 4MPO AMP 13.0719
255 3VC1 GST 13.1206
256 3VC1 SAH 13.1206
257 3QOX SAH 13.1206
258 5GWX SAR 13.8298
259 5GWX SAM 13.8298
260 3OFK SAH 13.8889
261 5W7R SAH 14.1844
262 5W7R 9Z7 14.1844
263 5MPT SAH 14.539
264 4KRI SAH 14.8936
265 3LCC SAH 16.5957
266 4NBW NAD 16.7315
267 2YX1 SFG 18.0851
268 2NXE SAM 18.5039
269 2P41 SAH 27.6596
Pocket No.: 2; Query (leader) PDB : 5XLX; Ligand: SAH; Similar sites found with APoc: 68
This union binding pocket(no: 2) in the query (biounit: 5xlx.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 6EL3 NAP 0.70922
2 5VN0 FAD 2.12766
3 1IY8 NAD 2.24719
4 1FK8 NAD 2.33463
5 6F5W KG1 2.48227
6 5Y1G AKB 2.48227
7 5Y1G NAD 2.48227
8 5I7S NAD 2.53623
9 5I7S E9P 2.53623
10 1GEG NAD 2.73438
11 3RJ5 NAD 2.75591
12 3V1U NAD 2.83688
13 5K7U SAM 2.83688
14 4FC7 COA 2.88809
15 4FC7 NAP 2.88809
16 2B4Q NAP 2.89855
17 1U7T TDT 3.06513
18 1U7T NAD 3.06513
19 3TN7 NJP 3.11284
20 5E72 SAM 3.19149
21 1U2Z SAH 3.19149
22 5K4W NAI 3.19149
23 5K4W THR 3.19149
24 1E5Q NDP 3.19149
25 3JQB DX6 3.19149
26 3QDK QDK 3.19149
27 3NUG NAD 3.19149
28 2EWM NAD 3.21285
29 4URF NAD 3.22581
30 3TLJ SAH 3.48525
31 2FR1 NDP 3.5461
32 3C6K MTA 3.5461
33 3C6K SPD 3.5461
34 1ZEM NAD 3.90071
35 2CXG GLC GLC 4.25532
36 5DWQ SFG 4.25532
37 5DX0 SFG 4.25532
38 4RSL FAD 4.25532
39 1TMO 2MD 4.60993
40 2BZG SAH 4.74138
41 4II2 ATP 4.90798
42 5FWA J7C 4.96454
43 3LKZ SFG 4.96454
44 5FEU NAP 5.31915
45 2DPM SAM 5.31915
46 2ZAT NAP 5.38462
47 4OOE FOM 5.67376
48 4OOE NDP 5.67376
49 3KJS NAP 5.67376
50 1EU1 MGD 5.67376
51 4XQC NAD 5.67376
52 4XQC 13D 5.67376
53 1E3W NAD 5.74713
54 1E6W NAD 5.76923
55 5FFF 5XC 5.83658
56 1E6E FAD 6.73759
57 2IV2 MGD 7.0922
58 6CZ7 MGD 7.44681
59 1EK6 NAI 8.15603
60 1EK6 UPG 8.15603
61 4HXY NDP 9.92908
62 3A27 SAM 10.2941
63 2JAH NDP 10.9312
64 2JAP NDP 11.336
65 5KVA SAM 13.6691
66 3SSO SAH 19.5035
67 1VL8 NAP 20.2247
68 3SJU NDP 24.7312
Pocket No.: 3; Query (leader) PDB : 5XLX; Ligand: SAH; Similar sites found with APoc: 71
This union binding pocket(no: 3) in the query (biounit: 5xlx.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
1 1ZK4 NAP 0.796813
2 1W8D NAP 1.06383
3 1W73 NAP 1.06383
4 5THQ NDP 1.47059
5 2EXX NAP 1.77305
6 1NW5 SAM 1.77305
7 5OVK NDP 1.95312
8 1GZ6 NAI 2.12766
9 2V6G NAP 2.12766
10 4GLL NAD 2.48227
11 3A4T SFG 2.55474
12 1YY5 FAD 2.72904
13 4FN4 NAD 2.75591
14 5IL1 SAM 2.83019
15 1W6U NAP 2.83688
16 5MLR NAP 2.83688
17 5MLR GRQ 2.83688
18 4N49 SAM 2.83688
19 4LWP SAH 2.83688
20 5UAO FAD 3.19149
21 1ORR NAD 3.19149
22 1G0N PHH 3.19149
23 1G0N NDP 3.19149
24 1SB8 NAD 3.19149
25 1SB8 UD2 3.19149
26 5O42 BGC 3.28467
27 5O42 NAD 3.28467
28 5O42 9JW 3.28467
29 2GDZ NAD 3.37079
30 1H5Q NAP 3.39623
31 2WYV NAD 3.44828
32 2WSB NAD 3.54331
33 5BJX NAD 3.5461
34 5BJX UDP 3.5461
35 3X01 AMP 4.07125
36 1Y8Q ATP 4.25532
37 5FA5 MTA 4.25532
38 1H9A NAP 4.25532
39 5DX8 SFG 4.25532
40 5DXA SFG 4.25532
41 5DX1 SFG 4.25532
42 5Z2L NDP 4.4898
43 1ZBQ NAD 4.60993
44 2IF8 ADP 4.60993
45 1XCL SAH 4.68085
46 3GEG NAD 4.8583
47 2PK3 A2R 5.31915
48 2XDQ MGX 5.31915
49 5GWT NAD 5.39568
50 5GWT SIN 5.39568
51 4ITU NAI 5.57621
52 4ITU 1HS 5.57621
53 2BD0 NAP 6.02837
54 5JJR SAH 6.02837
55 2PNC CLU 6.02837
56 1UZN NAP 6.07287
57 4O0L NDP 6.18182
58 1BXK NAD 6.38298
59 2VPY MGD 6.73759
60 5FUB SAH 7.0922
61 1Q7B NAP 7.78689
62 2XOC ADP 8.42912
63 2Z3Y F2N 8.51064
64 1TZD ADP 8.72727
65 2HMT NAI 9.02778
66 4D42 W0I 11.7021
67 4D42 NAP 11.7021
68 4IRP UDP 11.9522
69 1SQL GUN 14.3836
70 3QWI NAP 15.5556
71 2BMB PMM 18.7943
Pocket No.: 4; Query (leader) PDB : 5XLX; Ligand: SAH; Similar sites found with APoc: 78
This union binding pocket(no: 4) in the query (biounit: 5xlx.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 5NNT DPV None
2 4MOP 2H5 1.41844
3 6ER9 NAP 1.77305
4 5NMX FAD 1.77305
5 5NMX NAP 1.77305
6 6ER9 FAD 1.77305
7 1DCP HBI 1.92308
8 5VN0 NAI 2.12766
9 2DKN NAI 2.35294
10 1H82 GZZ 2.83688
11 1H82 FAD 2.83688
12 5YF1 8V0 2.83688
13 2I7C AAT 2.83688
14 3AYI FAD 2.83688
15 5KMS NAD 2.83688
16 5KMS FAD 2.83688
17 5YF1 SFG 2.83688
18 1PR9 NAP 2.86885
19 4YMH SAH 2.91667
20 5MBX SP5 3.19149
21 5MBX FAD 3.19149
22 2NPX FAD 3.19149
23 3A25 SAM 3.19149
24 4KBS PX2 3.25581
25 4YRY NAD 3.5461
26 4YRY FAD 3.5461
27 3PT9 SAH 3.5461
28 3IA4 NDP 3.7037
29 3DMH GMP 3.90071
30 3DMH SAM 3.90071
31 5KOX FAD 3.90071
32 5TTJ FAD 3.90071
33 2PX8 SAH 4.08922
34 5GT9 NAP 4.18251
35 4J1Q NDP 4.25532
36 5JWC FAD 4.60993
37 4YNU LGC 4.60993
38 4YNU FAD 4.60993
39 6F97 FAD 4.60993
40 1WY7 SAH 4.83092
41 1RSG FAD 4.96454
42 2VVM FAD 4.96454
43 3RG9 WRA 5
44 3RG9 NDP 5
45 2VVL FAD 5.31915
46 4USQ FAD 5.31915
47 5DK4 5BX 5.31915
48 5DK4 ATP 5.31915
49 2JB2 PHE 6.02837
50 2JB2 FAD 6.02837
51 4Z24 FAD 6.02837
52 2CDU FAD 6.02837
53 5OC1 FAD 6.02837
54 2WET FAD 6.06654
55 5J60 FAD 6.25
56 3UCL FAD 6.38298
57 3UCL NAP 6.38298
58 3UCL CYH 6.38298
59 3VYW SAM 6.38298
60 1X87 NAD 6.38298
61 4M37 SAH 6.70554
62 4DSG UDP 7.0922
63 5I60 67W 7.0922
64 1XKQ NDP 7.14286
65 5OJI ISN 7.30769
66 5OJI NAP 7.30769
67 3OID NDP 7.36434
68 2O07 MTA 7.80142
69 2O07 SPD 7.80142
70 1VLJ NAP 7.80142
71 4ZA2 NAD 7.90514
72 5WUW NAP 8.15603
73 3H5N ATP 9.21986
74 4GUT FAD 10.4839
75 4HSU FAD 10.4839
76 5YEC ATP 14.2857
77 5N5D SAM 17.6991
78 5MT9 SRO 23.8095
APoc FAQ
Feedback