Receptor
PDB id Resolution Class Description Source Keywords
5UY9 1.85 Å EC: 5.2.1.8 PROLYL ISOMERASE PIN1 R14A MUTANT BOUND WITH BRD4 PEPTIDE HOMO SAPIENS ISOMERASE
Ref.: PROLYL ISOMERASE PIN1 REGULATES THE STABILITY, TRANSCRIPTIONAL ACTIVITY AND ONCOGENIC POTENTIAL OF ONCOGENE V. 36 5177 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SO4 B:101;
A:301;
 Invalid;
Invalid;
 none;
none;
 submit data
96.063 O4 S [O-]S...
GLN ALA SER TPO PRO ARG NIT B:1;
 Valid;
 none;
 submit data
858.804 n/a P(=O)...
PE4 A:300;
 Invalid;
 none;
 submit data
354.436 C16 H34 O8 CCOCC...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2ITK 1.45 Å EC: 5.2.1.8 HUMAN PIN1 BOUND TO D-PEPTIDE HOMO SAPIENS PIN1 ISOMERASE WW DOMAIN ISOMERASE-ISOMERASE INHIBITOR CO
Ref.: STRUCTURAL BASIS FOR HIGH-AFFINITY PEPTIDE INHIBITI HUMAN PIN1. ACS CHEM.BIOL. V. 2 320 2007
Members (27)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 30 families.
1 2ITK Ki = 20.4 nM ACE PHE D11 YCP NAL GLN NH2 n/a n/a
2 2XPB ic50 = 2 uM 4GE C19 H16 Cl N3 O3 CN(Cc1cccc....
3 3KAG ic50 = 6.6 uM 4D7 C16 H15 N3 O4 Cc1c(cco1)....
4 3KAI ic50 = 3.9 uM 4FI C24 H21 N3 O3 Cn1c(cc(n1....
5 2Q5A Ki = 507 nM ACE PHE TPO YCP NAL GLN NH2 n/a n/a
6 2XPA ic50 = 4.1 uM 4G5 C14 H14 N4 O4 CN(CC(=O)N....
7 3WH0 - O4B C12 H24 O6 C1COCCOCCO....
8 2XP3 - B21 C12 H10 O4 COc1ccccc1....
9 3ODK ic50 = 720 uM ODK C9 H7 N3 O2 c1ccnc(c1)....
10 3TDB - 3TB C24 H38 N7 O7 P [H]/N=C(N)....
11 3KAD ic50 = 7.5 uM 4C0 C19 H19 N3 O3 c1ccc(cc1)....
12 2XP4 ic50 = 180 uM G14 C10 H8 N2 O2 c1ccc(cc1)....
13 3KAB ic50 = 630 uM 4BL C10 H9 N O2 Cc1ccc2cc(....
14 3OOB Kd = 21.6 uM KDH C22 H18 O11 c1c(cc(c(c....
15 2XP5 ic50 = 360 uM 4FF C11 H10 N2 O2 Cc1c(nc([n....
16 2XP7 Kd = 1.7 uM 4F8 C11 H8 N2 O4 c1ccc(cc1)....
17 3TCZ - R2Z C16 H29 N6 O7 P [H]/N=C(N)....
18 3KAH ic50 = 0.26 uM 4DH C21 H19 N5 O3 Cn1c(cc(n1....
19 2XP6 ic50 = 20 uM 4G2 C11 H9 Cl N2 O2 Cc1c(nc([n....
20 2XP8 ic50 = 15 uM 4FY C15 H15 N3 O4 c1ccc(cc1)....
21 3KAF ic50 = 0.83 uM 4D9 C19 H15 N3 O3 S c1ccc2c(c1....
22 5UY9 - GLN ALA SER TPO PRO ARG NIT n/a n/a
23 3NTP ic50 = 12 uM RZD C20 H29 N4 O6 P CC(=O)N[C@....
24 2XP9 - 4G8 C20 H17 N3 O5 c1ccc(cc1)....
25 3KCE - 4BY C10 H9 N O2 Cc1ccc2c(c....
26 3TC5 - 3T5 C22 H30 F O8 P C[C@@H]1C[....
27 1F8A Kd = 10 uM TYR SEP PRO THR SEP PRO SER n/a n/a
70% Homology Family (33)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 20 families.
1 2ITK Ki = 20.4 nM ACE PHE D11 YCP NAL GLN NH2 n/a n/a
2 2XPB ic50 = 2 uM 4GE C19 H16 Cl N3 O3 CN(Cc1cccc....
3 3KAG ic50 = 6.6 uM 4D7 C16 H15 N3 O4 Cc1c(cco1)....
4 3KAI ic50 = 3.9 uM 4FI C24 H21 N3 O3 Cn1c(cc(n1....
5 2Q5A Ki = 507 nM ACE PHE TPO YCP NAL GLN NH2 n/a n/a
6 2XPA ic50 = 4.1 uM 4G5 C14 H14 N4 O4 CN(CC(=O)N....
7 3WH0 - O4B C12 H24 O6 C1COCCOCCO....
8 2XP3 - B21 C12 H10 O4 COc1ccccc1....
9 3ODK ic50 = 720 uM ODK C9 H7 N3 O2 c1ccnc(c1)....
10 3TDB - 3TB C24 H38 N7 O7 P [H]/N=C(N)....
11 3KAD ic50 = 7.5 uM 4C0 C19 H19 N3 O3 c1ccc(cc1)....
12 2XP4 ic50 = 180 uM G14 C10 H8 N2 O2 c1ccc(cc1)....
13 3KAB ic50 = 630 uM 4BL C10 H9 N O2 Cc1ccc2cc(....
14 3OOB Kd = 21.6 uM KDH C22 H18 O11 c1c(cc(c(c....
15 2XP5 ic50 = 360 uM 4FF C11 H10 N2 O2 Cc1c(nc([n....
16 2XP7 Kd = 1.7 uM 4F8 C11 H8 N2 O4 c1ccc(cc1)....
17 3TCZ - R2Z C16 H29 N6 O7 P [H]/N=C(N)....
18 3KAH ic50 = 0.26 uM 4DH C21 H19 N5 O3 Cn1c(cc(n1....
19 2XP6 ic50 = 20 uM 4G2 C11 H9 Cl N2 O2 Cc1c(nc([n....
20 2XP8 ic50 = 15 uM 4FY C15 H15 N3 O4 c1ccc(cc1)....
21 3KAF ic50 = 0.83 uM 4D9 C19 H15 N3 O3 S c1ccc2c(c1....
22 5UY9 - GLN ALA SER TPO PRO ARG NIT n/a n/a
23 3NTP ic50 = 12 uM RZD C20 H29 N4 O6 P CC(=O)N[C@....
24 2XP9 - 4G8 C20 H17 N3 O5 c1ccc(cc1)....
25 3KCE - 4BY C10 H9 N O2 Cc1ccc2c(c....
26 3TC5 - 3T5 C22 H30 F O8 P C[C@@H]1C[....
27 1F8A Kd = 10 uM TYR SEP PRO THR SEP PRO SER n/a n/a
28 3I6C Ki = 12 uM GIA C20 H16 F N O3 c1ccc2cc(c....
29 4TYO Ki = 0.08 uM 39X C21 H16 F N3 O3 c1ccc2cc(c....
30 3IKG - J8Z C19 H18 N O5 P S Cc1cccc(c1....
31 3KAC ic50 = 740 uM 4BX C10 H10 N2 O2 c1ccc2c(c1....
32 3JYJ Ki = 1.8 uM JZI C22 H19 N O3 c1ccc(cc1)....
33 3IKD - J9Z C18 H16 N O5 P S c1ccc(cc1)....
50% Homology Family (33)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 13 families.
1 2ITK Ki = 20.4 nM ACE PHE D11 YCP NAL GLN NH2 n/a n/a
2 2XPB ic50 = 2 uM 4GE C19 H16 Cl N3 O3 CN(Cc1cccc....
3 3KAG ic50 = 6.6 uM 4D7 C16 H15 N3 O4 Cc1c(cco1)....
4 3KAI ic50 = 3.9 uM 4FI C24 H21 N3 O3 Cn1c(cc(n1....
5 2Q5A Ki = 507 nM ACE PHE TPO YCP NAL GLN NH2 n/a n/a
6 2XPA ic50 = 4.1 uM 4G5 C14 H14 N4 O4 CN(CC(=O)N....
7 3WH0 - O4B C12 H24 O6 C1COCCOCCO....
8 2XP3 - B21 C12 H10 O4 COc1ccccc1....
9 3ODK ic50 = 720 uM ODK C9 H7 N3 O2 c1ccnc(c1)....
10 3TDB - 3TB C24 H38 N7 O7 P [H]/N=C(N)....
11 3KAD ic50 = 7.5 uM 4C0 C19 H19 N3 O3 c1ccc(cc1)....
12 2XP4 ic50 = 180 uM G14 C10 H8 N2 O2 c1ccc(cc1)....
13 3KAB ic50 = 630 uM 4BL C10 H9 N O2 Cc1ccc2cc(....
14 3OOB Kd = 21.6 uM KDH C22 H18 O11 c1c(cc(c(c....
15 2XP5 ic50 = 360 uM 4FF C11 H10 N2 O2 Cc1c(nc([n....
16 2XP7 Kd = 1.7 uM 4F8 C11 H8 N2 O4 c1ccc(cc1)....
17 3TCZ - R2Z C16 H29 N6 O7 P [H]/N=C(N)....
18 3KAH ic50 = 0.26 uM 4DH C21 H19 N5 O3 Cn1c(cc(n1....
19 2XP6 ic50 = 20 uM 4G2 C11 H9 Cl N2 O2 Cc1c(nc([n....
20 2XP8 ic50 = 15 uM 4FY C15 H15 N3 O4 c1ccc(cc1)....
21 3KAF ic50 = 0.83 uM 4D9 C19 H15 N3 O3 S c1ccc2c(c1....
22 5UY9 - GLN ALA SER TPO PRO ARG NIT n/a n/a
23 3NTP ic50 = 12 uM RZD C20 H29 N4 O6 P CC(=O)N[C@....
24 2XP9 - 4G8 C20 H17 N3 O5 c1ccc(cc1)....
25 3KCE - 4BY C10 H9 N O2 Cc1ccc2c(c....
26 3TC5 - 3T5 C22 H30 F O8 P C[C@@H]1C[....
27 1F8A Kd = 10 uM TYR SEP PRO THR SEP PRO SER n/a n/a
28 3I6C Ki = 12 uM GIA C20 H16 F N O3 c1ccc2cc(c....
29 4TYO Ki = 0.08 uM 39X C21 H16 F N3 O3 c1ccc2cc(c....
30 3IKG - J8Z C19 H18 N O5 P S Cc1cccc(c1....
31 3KAC ic50 = 740 uM 4BX C10 H10 N2 O2 c1ccc2c(c1....
32 3JYJ Ki = 1.8 uM JZI C22 H19 N O3 c1ccc(cc1)....
33 3IKD - J9Z C18 H16 N O5 P S c1ccc(cc1)....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: GLN ALA SER TPO PRO ARG NIT; Similar ligands found: 51
No: Ligand ECFP6 Tc MDL keys Tc
1 GLN ALA SER TPO PRO ARG NIT 1 1
2 MET GLN SER TPO PRO LEU 0.509804 0.732558
3 GLN ARG SER THR SEP THR PRO ASN VAL HIS 0.484277 0.777778
4 ARG SER ALA SEP GLU PRO SER LEU 0.463855 0.819277
5 ALA GLY SER VAL GLU GLN TPO PRO LYS LYS 0.45614 0.771084
6 PRO MET GLN SER TPO PRO LEU 0.453988 0.755814
7 ARG ILE PRO SER TYR ARG TYR ARG TYR 0.450617 0.755814
8 LEU LEU CYS SER TPO PRO ASN GLY LEU 0.446541 0.75
9 MET CYS PRO ARG MET THR ALA VAL MET 0.446429 0.701149
10 ASN PRO ARG ALA MET GLN ALA LEU LEU 0.441718 0.659091
11 ARG GLN ALA SEP ILE GLU LEU PRO SER MET 0.44086 0.772727
12 ARG ARG ALA SEP ALA PRO LEU PRO 0.439024 0.795181
13 GLN THR ALA ARG M3L SER THR GLY 0.435897 0.632184
14 ARG SER LEU SEP ALA PRO GLY ASN 0.434783 0.807229
15 SER PRO LYS ARG ILE ALA 0.434211 0.719512
16 ARG SER HIS SEP SER PRO ALA SER LEU GLN 0.432432 0.833333
17 ALA ALA ARG KCR SER ALA PRO ALA 0.427711 0.722892
18 ARG VAL ALA SEP PRO THR SER GLY VAL 0.426035 0.829268
19 ALA DAL PRO PHE NIT 0.425676 0.73494
20 ALA ARG MLZ SER ALA PRO ALA THR 0.423313 0.72093
21 5JP PRO LYS ARG ILE ALA 0.423077 0.702381
22 VAL MET ALA PRO ARG ALA LEU LEU LEU 0.42236 0.625
23 GLY ARG PRO ARG THR THR SER PHE ALA GLU 0.421348 0.802469
24 GLN VAL PRO LEU ARG PRO MET THR TYR LYS 0.418848 0.730337
25 HIS ALA TPO PRO PRO LYS LYS GLU ALA ASP 0.417582 0.771084
26 GLN PRO PRO VAL PRO PRO GLN ARG PRO MET 0.416667 0.666667
27 DPN PRO DAR DTH NH2 0.414474 0.75
28 ARG PRO GLN VAL PRO LEU ARG PRO MET 0.414201 0.666667
29 LYS ARG ARG ARG HIS PRO SER GLY 0.413174 0.756098
30 ARG ILE ILE PRO ARG HIS LEU GLN LEU 0.412429 0.686047
31 ARG VAL ALA SER PRO THR SER GLY VAL 0.411043 0.756098
32 HIS HIS ALA SER PRO ARG LYS 0.410405 0.722892
33 ARG SEP PRO VAL PHE SER 0.406977 0.82716
34 ALA MET ALA PRO ARG THR LEU LEU LEU 0.406061 0.681818
35 ALA ASN SER ARG ALA PRO THR SER ILE ILE 0.405882 0.729412
36 LEU PRO PHE GLU ARG ALA THR VAL MET 0.405405 0.724138
37 DPN PRO DAR ILE NH2 0.405229 0.670732
38 TYR PRO LYS ARG ILE ALA 0.404762 0.705882
39 SER ARG ASP HIS SER ARG THR PRO MET 0.404372 0.738636
40 DPN PRO DAR CYS NH2 0.403974 0.666667
41 THR PRO ARG ARG SER MLZ SER ALA 0.403846 0.729412
42 ACE GLN GLU ARG GLU VAL PRO CYS 0.402516 0.666667
43 ARG THR PRO SEP LEU PRO THR 0.402439 0.829268
44 ARG THR PRO SEP LEU PRO THR 49F 0.402439 0.829268
45 ARG GLN PRO ALA LYS ALA PRO LEU LEU 0.402367 0.690476
46 GLN ARG SER THR SEP THR 0.401316 0.691358
47 ASN ARG PRO ILE LEU SER LEU 0.401235 0.717647
48 THR PRO ARG VAL THR GLY GLY GLY ALA MET 0.401163 0.704545
49 ACE ALA ALA ARG LBZ SER ALA PRO ALA 0.401163 0.756098
50 ARG ARG LEU PRO ILE PHE SER ARG LEU 0.4 0.75
51 ARG PRO LYS ARG ILE ALA 0.4 0.674699
Similar Ligands (3D)
Ligand no: 1; Ligand: GLN ALA SER TPO PRO ARG NIT; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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