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Receptor
PDB id Resolution Class Description Source Keywords
5TUF 2.25 Å EC: 2.-.-.- CRYSTAL STRUCTURE OF TETRACYCLINE DESTRUCTASE TET(50) IN COM ANHYDROTETRACYCLINE UNCULTURED BACTERIUM FAD-BINDING TETRACYCLINE-INACTIVATING OXIDOREDUCTASE ACTIVOXIDOREDUCTASE
Ref.: PLASTICITY, DYNAMICS, AND INHIBITION OF EMERGING TETRACYCLINE RESISTANCE ENZYMES. NAT. CHEM. BIOL. V. 13 730 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
TDC B:405;
Valid;
none;
ic50 = 83.2 uM
426.419 C22 H22 N2 O7 Cc1c2...
SO4 B:401;
A:403;
A:402;
B:403;
B:402;
A:401;
A:404;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
FAD A:405;
B:404;
Valid;
Valid;
none;
none;
submit data
785.55 C27 H33 N9 O15 P2 Cc1cc...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5TUF 2.25 Å EC: 2.-.-.- CRYSTAL STRUCTURE OF TETRACYCLINE DESTRUCTASE TET(50) IN COM ANHYDROTETRACYCLINE UNCULTURED BACTERIUM FAD-BINDING TETRACYCLINE-INACTIVATING OXIDOREDUCTASE ACTIVOXIDOREDUCTASE
Ref.: PLASTICITY, DYNAMICS, AND INHIBITION OF EMERGING TETRACYCLINE RESISTANCE ENZYMES. NAT. CHEM. BIOL. V. 13 730 2017
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 269 families.
1 5TUF ic50 = 83.2 uM TDC C22 H22 N2 O7 Cc1c2cccc(....
2 5TUI - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
3 5TUE - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 237 families.
1 5TUF ic50 = 83.2 uM TDC C22 H22 N2 O7 Cc1c2cccc(....
2 5TUI - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
3 5TUE - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
4 5TUK - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 187 families.
1 5TUF ic50 = 83.2 uM TDC C22 H22 N2 O7 Cc1c2cccc(....
2 5TUI - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
3 5TUE - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
4 5TUK - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: TDC; Similar ligands found: 2
No: Ligand ECFP6 Tc MDL keys Tc
1 TDC 1 1
2 4DM 0.581395 0.762712
Ligand no: 2; Ligand: FAD; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 FAD 1 1
2 FAS 1 1
3 FAY 0.859259 0.9875
4 RFL 0.852941 0.963855
5 6FA 0.794118 0.987654
6 FAE 0.751773 0.987654
7 SFD 0.651007 0.860215
8 FDA 0.641892 0.906977
9 FNK 0.602564 0.876405
10 62F 0.572327 0.939024
11 F2N 0.566265 0.886364
12 FMN 0.543307 0.876543
13 FA9 0.526316 0.939759
14 6YU 0.516304 0.860215
15 P6G FDA 0.511628 0.908046
16 FAD NBT 0.508876 0.83871
17 A2D 0.504065 0.875
18 P5F 0.491329 0.941176
19 FAD CNX 0.488506 0.8125
20 AR6 0.488372 0.851852
21 APR 0.488372 0.851852
22 AGS 0.484615 0.811765
23 SAP 0.484615 0.811765
24 M33 0.484375 0.864198
25 BA3 0.484127 0.875
26 HEJ 0.48062 0.851852
27 ATP 0.48062 0.851852
28 ADP 0.480315 0.851852
29 B4P 0.480315 0.875
30 AP5 0.480315 0.875
31 ANP 0.477273 0.831325
32 AQP 0.476923 0.851852
33 5FA 0.476923 0.851852
34 48N 0.469388 0.902439
35 OAD 0.467626 0.876543
36 9X8 0.467626 0.833333
37 FAD NBA 0.467033 0.793814
38 GTA 0.465753 0.892857
39 AN2 0.465116 0.841463
40 AT4 0.465116 0.821429
41 AD9 0.462121 0.831325
42 3OD 0.460993 0.876543
43 RBF 0.460938 0.790123
44 FB0 0.460606 0.835165
45 139 0.460526 0.858824
46 AP0 0.46 0.835294
47 A22 0.459854 0.864198
48 ACP 0.458015 0.853659
49 8QN 0.456522 0.864198
50 PRX 0.454545 0.831325
51 A3R 0.453237 0.86747
52 A1R 0.453237 0.86747
53 G3A 0.452055 0.902439
54 T5A 0.45098 0.872093
55 G5P 0.44898 0.902439
56 ATF 0.448529 0.821429
57 50T 0.44697 0.819277
58 6YZ 0.445255 0.853659
59 ACQ 0.444444 0.853659
60 CNV FAD 0.443182 0.917647
61 ADQ 0.442857 0.853659
62 PAJ 0.442857 0.847059
63 5AL 0.441176 0.864198
64 ADX 0.439394 0.775281
65 CA0 0.439394 0.853659
66 A4P 0.437909 0.831461
67 25L 0.4375 0.864198
68 P33 FDA 0.436464 0.817204
69 5SV 0.435714 0.793103
70 OMR 0.434211 0.818182
71 TXE 0.434211 0.890244
72 ABM 0.434109 0.829268
73 A 0.433071 0.82716
74 AMP 0.433071 0.82716
75 4AD 0.432624 0.855422
76 ADJ 0.432258 0.818182
77 B5M 0.431507 0.878049
78 B5Y 0.431507 0.878049
79 BIS 0.430556 0.802326
80 SRA 0.429688 0.788235
81 AFH 0.42953 0.825581
82 NXX 0.427632 0.865854
83 DND 0.427632 0.865854
84 UP5 0.427632 0.878049
85 6V0 0.427632 0.857143
86 TXD 0.427632 0.890244
87 DQV 0.426667 0.8875
88 SRP 0.42446 0.843373
89 PR8 0.423611 0.837209
90 T99 0.423358 0.821429
91 TAT 0.423358 0.821429
92 AMO 0.422535 0.865854
93 TXA 0.42069 0.865854
94 FYA 0.42069 0.864198
95 PTJ 0.42069 0.835294
96 CNA 0.420382 0.865854
97 00A 0.41958 0.823529
98 AHX 0.41958 0.835294
99 MAP 0.41844 0.811765
100 NAI 0.418301 0.845238
101 AU1 0.41791 0.831325
102 A12 0.416667 0.843373
103 AP2 0.416667 0.843373
104 25A 0.415493 0.851852
105 9ZA 0.415493 0.845238
106 9ZD 0.415493 0.845238
107 COD 0.415094 0.842697
108 4TC 0.412903 0.879518
109 APC 0.411765 0.843373
110 ME8 0.410959 0.806818
111 1ZZ 0.410959 0.806818
112 NB8 0.410959 0.835294
113 4UW 0.409091 0.825581
114 NAX 0.409091 0.837209
115 F2R 0.408805 0.850575
116 RBY 0.408759 0.843373
117 ADV 0.408759 0.843373
118 P1H 0.405882 0.818182
119 OOB 0.405594 0.864198
120 LAD 0.40411 0.825581
121 A A 0.40411 0.829268
122 UPA 0.403846 0.86747
123 4UU 0.401316 0.833333
124 GA7 0.401316 0.865854
125 A3D 0.401235 0.876543
126 80F 0.401235 0.808989
127 XAH 0.4 0.806818
128 DLL 0.4 0.864198
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5TUF; Ligand: FAD; Similar sites found with APoc: 806
This union binding pocket(no: 1) in the query (biounit: 5tuf.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 3KPE TM3 None
2 1KOL NAD 1.00503
3 3ULK NDP 1.22249
4 5KOK SAH 1.25945
5 1UWK URO 1.46699
6 1UWK NAD 1.46699
7 2JHP SAH 1.46699
8 1JG9 GLC 1.46699
9 4DCM SAM 1.6
10 5E9W SAH 1.60256
11 5LD5 NAD 1.67598
12 1KEV NDP 1.7094
13 3AYI HCI 1.71149
14 3AYI FAD 1.71149
15 1PS9 FAD 1.71149
16 1PJS NAD 1.71149
17 1PS9 NAP 1.71149
18 5C9P FUC 1.71149
19 1H82 FAD 1.71149
20 1GQ2 NAP 1.71149
21 1H82 GZZ 1.71149
22 1DQN IMU 1.73913
23 2QRK AMP 1.77665
24 4KOA NDP 1.8018
25 1E3I CXF 1.8617
26 1CDO NAD 1.87166
27 4JZ8 CIT 1.89274
28 4MO2 FDA 1.90217
29 4MO2 FAD 1.90217
30 2YY7 NAD 1.92308
31 1KEW NAD 1.93906
32 1KEW TYD 1.93906
33 2IZ1 ATR 1.95599
34 1VJT NAD 1.95599
35 1DIG NAP 1.96078
36 1DIG L37 1.96078
37 2I3G NAP 1.98864
38 2GSD NAD 1.99005
39 2PV7 NAD 2.01342
40 3CQL NAG 2.05761
41 2YX1 SFG 2.08333
42 1LUA NAP 2.09059
43 4RQU NAD 2.13333
44 4YT4 FE9 2.13333
45 5GZ6 NDP 2.14724
46 5GZ6 7C3 2.14724
47 2CDU FAD 2.20049
48 1DJN ADP 2.20049
49 5UAO FAD 2.20049
50 5G3U FDA 2.20049
51 3OND ADN 2.20049
52 3OND NAD 2.20049
53 1O0S NAI 2.20049
54 5G3U ITW 2.20049
55 1OBB NAD 2.20049
56 2CDU ADP 2.20049
57 4D86 ADP 2.20049
58 2NAD NAD 2.20049
59 3AI3 SOE 2.28137
60 1ZEM NAD 2.29008
61 1YJQ NAP 2.31023
62 5EIN NAP 2.32558
63 4ZGS NAD 2.33161
64 5U5G NAP 2.37288
65 1RM4 NDP 2.37389
66 1R6D DAU 2.37389
67 1R6D NAD 2.37389
68 6CEP NAD 2.39521
69 6CEP OXM 2.39521
70 4ZVV GN0 2.40964
71 4ZVV NAD 2.40964
72 9LDT NAD 2.40964
73 9LDB NAD 2.40964
74 5A96 GTP 2.40964
75 1LDM NAD 2.43161
76 5VN0 FAD 2.44499
77 4YNU LGC 2.44499
78 4YNU FAD 2.44499
79 5OC1 FAD 2.44499
80 3E7S AT2 2.44499
81 6H3O FAD 2.44499
82 5VN0 NAI 2.44499
83 3WQQ NDP 2.44499
84 3WQQ IB3 2.44499
85 2YVF NAD 2.45098
86 2YVF FAD 2.45098
87 1T26 GBD 2.48447
88 1T26 NAI 2.48447
89 1X14 NAD 2.49377
90 4D79 ATP 2.53623
91 4DMG SAM 2.54453
92 3A4T SFG 2.55474
93 3O9Z AKG 2.5641
94 1DRV A3D 2.5641
95 3O9Z NAD 2.5641
96 1NYT NAP 2.58303
97 2YYY NAP 2.62391
98 4M37 SAH 2.62391
99 4M38 SAH 2.62391
100 5NM7 GLY 2.63158
101 4YUW S4M 2.63158
102 4YUW 4JU 2.63158
103 4MP8 MLI 2.65487
104 4MP8 NAD 2.65487
105 5AHN IMP 2.65849
106 4L8V NAP 2.67062
107 4GKV NAD 2.67857
108 3CGD FAD 2.68949
109 3CGD COA 2.68949
110 4EMI FAD 2.68949
111 3CGB FAD 2.68949
112 2GMH FAD 2.68949
113 1COY AND 2.68949
114 3X0V FAD 2.68949
115 5FJN FAD 2.68949
116 5FJN BE2 2.68949
117 4MIG G3F 2.68949
118 1COY FAD 2.68949
119 3CGD NAD 2.68949
120 4EMI NAD 2.68949
121 6F97 FAD 2.68949
122 1QMG APX 2.68949
123 2FN1 PYR 2.68949
124 4IPN 1FT 2.68949
125 1E5Q NDP 2.68949
126 1W55 GPP 2.69542
127 1J49 NAD 2.7027
128 1XHC FAD 2.7248
129 1H2B NAJ 2.78552
130 5G4L NDP 2.7972
131 2A92 NAI 2.80374
132 1F06 2NP 2.8125
133 1F06 NDP 2.8125
134 3GU3 SAH 2.8169
135 1LTH NAD 2.82132
136 2DT5 NAD 2.8436
137 6GAR FAD 2.86533
138 3DMH SAM 2.88714
139 1JXN MFU 2.89256
140 3NGL NAP 2.89855
141 3UCL NAP 2.93399
142 3UCL FAD 2.93399
143 3UCL CYH 2.93399
144 4B63 ORN 2.93399
145 4B63 FAD 2.93399
146 4B63 NAP 2.93399
147 4BV6 FAD 2.93399
148 2WET FAD 2.93399
149 1UP7 NAD 2.93399
150 1V8B NAD 2.93399
151 5GUD NDP 2.93399
152 5ZXD ATP 2.93399
153 1P77 ATR 2.94118
154 5TOW NAI 2.9484
155 5TOW ADN 2.9484
156 1CF2 NAP 2.96736
157 3KB6 NAD 2.99401
158 4POO SAM 3
159 2CDC XYP 3.00546
160 2CDC XYS 3.00546
161 2CDC NAP 3.00546
162 5NUF NAD 3.01205
163 5NUE NAD 3.01205
164 3CBG SAH 3.01724
165 4YAC NAI 3.0303
166 2ZIF SAM 3.0303
167 3AB1 FAD 3.05556
168 2CVQ NDP 3.0581
169 3DAG FEG 3.07263
170 1YS4 NAP 3.10734
171 2EJU SAH 3.1746
172 1XPJ TLA 3.1746
173 1MUU NAD 3.17848
174 1MV8 NAD 3.17848
175 2C7G ODP 3.17848
176 6C4M NAP 3.17848
177 2C7G FAD 3.17848
178 3L9W GSH 3.17848
179 3L9W AMP 3.17848
180 3DDN HPV 3.17848
181 5MPT SAH 3.17848
182 1RM0 D6P 3.17848
183 2EG5 SAH 3.17848
184 1RM0 NAI 3.17848
185 5Z20 NAI 3.18841
186 1RL4 BL5 3.19149
187 1LJ8 NAD 3.24544
188 1M2W NAD 3.24544
189 1HDR NAD 3.27869
190 1UAY ADN 3.30579
191 3LZW FAD 3.31325
192 1V6A TRE 3.31325
193 3LZW NAP 3.31325
194 4USR FAD 3.3241
195 1VI2 NAD 3.33333
196 1BW9 NAD 3.37079
197 1BXG NAD 3.37079
198 2EB5 OXL 3.37079
199 3C3Y SAH 3.37553
200 1C1X NAD 3.38028
201 1I36 NAP 3.40909
202 2D2I NAP 3.42105
203 2O4C NAD 3.42105
204 3LAD FAD 3.42298
205 1X87 NAD 3.42298
206 3NJ4 NAD 3.42298
207 1HFU NAG NDG 3.42298
208 3NJ4 AFX 3.42298
209 1W62 PYC 3.42298
210 6E1Q CFA 3.42298
211 4C4A SAH 3.42298
212 5NA1 FAD 3.43137
213 2VHW NAI 3.44828
214 6HL7 CP 3.44828
215 4OOE FOM 3.46535
216 4OOE NDP 3.46535
217 1NPD NAD 3.47222
218 5WUW NAP 3.48432
219 4OBW SAM 3.50195
220 1F8F NAD 3.50404
221 4J56 FAD 3.50877
222 4FWE FAD 3.51759
223 5A1T NAI 3.51906
224 3V1Y NAD 3.56083
225 4XB2 NDP 3.58209
226 4XB2 HSE 3.58209
227 5X9D 80F 3.61842
228 4URF NAD 3.62903
229 1NAA 6FA 3.66748
230 4Z24 FAD 3.66748
231 5HSA FAS 3.66748
232 1NAA ABL 3.66748
233 2YVJ NAI 3.66972
234 2YVJ FAD 3.66972
235 3DXY SAM 3.66972
236 1Q9I FAD 3.67776
237 1Q9I TEO 3.67776
238 3JWH SAH 3.68664
239 5O9F NAD 3.69318
240 5O9F 9ON 3.69318
241 3OFK SAH 3.7037
242 3A06 NDP 3.7234
243 3A06 FOM 3.7234
244 1OMO NAD 3.72671
245 1OC2 TDX 3.73563
246 1OC2 NAD 3.73563
247 1Y8Q ATP 3.75723
248 5YU3 NAD 3.77907
249 5YU3 PRO 3.77907
250 1LDN NAD 3.79747
251 1NE7 AGP 3.80623
252 3B20 NAD 3.83481
253 3B1J NAD 3.83481
254 4NTO 1PW 3.86473
255 3ACC 5GP 3.8674
256 4NTC FAD 3.8806
257 1HKU NAD 3.91061
258 4TXI FAD 3.91198
259 2BRY FAD 3.91198
260 3G5S FAD 3.91198
261 1E1M NAP 3.91198
262 1E1M FAD 3.91198
263 2ZJ1 NAD 3.91198
264 2ZJ1 ARJ 3.91198
265 5EB4 FAD 3.91198
266 5WP4 SAH 3.91198
267 5YAP NAI 3.91198
268 5YAP 8S0 3.91198
269 2NXE SAM 3.93701
270 2GCG NDP 3.93939
271 3K5I AIR 3.97022
272 1DLJ NAI 3.9801
273 1DLJ UGA 3.9801
274 4RPL FAD 4.01003
275 4RPL 3UC 4.01003
276 2JHF NAD 4.01069
277 1P1C SAH 4.0201
278 1AJ8 CIT 4.04313
279 1VL0 NAI 4.10959
280 2R4J 13P 4.15648
281 2R4J FAD 4.15648
282 3ETG GLU 4.15648
283 3ETG NDP 4.15648
284 3ETG GTP 4.15648
285 6GNA FAD 4.16667
286 1NVM NAD 4.16667
287 4FZV SAM 4.17827
288 5GSN NAP 4.19426
289 5GSN MMZ 4.19426
290 5GSN FAD 4.19426
291 1DSS NAD 4.2042
292 3FG2 FAD 4.20792
293 4XFR CIT 4.21546
294 1MZV AMP 4.25532
295 4TSK NDP 4.28571
296 5N2I NAP 4.31034
297 4YRY NAD 4.34783
298 4YRY FAD 4.34783
299 1J5P NAD 4.34783
300 1HGX 5GP 4.37158
301 1LLU NAD 4.38596
302 4K5S FAD 4.40098
303 1Q1R FAD 4.40098
304 2NPX FAD 4.40098
305 4K5S PM0 4.40098
306 1WDK NAD 4.40098
307 3OJO NAD 4.40098
308 2NPX NAD 4.40098
309 3WBF NAP 4.40098
310 3WBF API 4.40098
311 2DBZ NAP 4.40098
312 5WP5 SAH 4.40098
313 5T9E NAP 4.42804
314 4BVA NDP 4.47761
315 4BVA T3 4.47761
316 3B1F NAD 4.48276
317 3DUW SAH 4.4843
318 3RGQ 5P5 4.48718
319 1HDG NAD 4.51807
320 6A0S NDP 4.51807
321 6A0S HSE 4.51807
322 5AYV NAP 4.53074
323 5AYV KPL 4.53074
324 1ZQ9 SAM 4.5614
325 4CNK FAD 4.60358
326 1GR0 NAD 4.63215
327 2RAB NAD 4.64548
328 2RAB FAD 4.64548
329 3SQP FAD 4.64548
330 5MBX SP5 4.64548
331 5MBX FAD 4.64548
332 4AP3 FAD 4.64548
333 4AP3 NAP 4.64548
334 5NMX NAP 4.64548
335 5NMX FAD 4.64548
336 6C4T NA7 4.64548
337 4EDF UPG 4.64548
338 4A59 AMP 4.64548
339 5E4R NAP 4.64548
340 5TWB FAD 4.65116
341 2PXX SAH 4.65116
342 5DN9 NAD 4.67033
343 4EMJ FAD 4.6729
344 3QJ4 FAD 4.67836
345 2RI1 GLP 4.68085
346 1QK3 5GP 4.72103
347 1H74 ILE 4.72973
348 5O42 BGC 4.74453
349 5O42 NAD 4.74453
350 5O42 9JW 4.74453
351 4R5M NAP 4.78723
352 4R5M 4NO 4.78723
353 3VPH NAD 4.83871
354 3VPH OXM 4.83871
355 4REP FAD 4.84848
356 5D4V SAH 4.85075
357 5ZW3 SAH 4.88889
358 3ICT ADP 4.88998
359 3IHG FAD 4.88998
360 2NVK NAP 4.88998
361 1QO8 FAD 4.88998
362 3ICR FAD 4.88998
363 3ICS FAD 4.88998
364 4D04 FAD 4.88998
365 4D04 NAP 4.88998
366 3ICT FAD 4.88998
367 2VVM FAD 4.88998
368 2NVK FAD 4.88998
369 2XVE FAD 4.88998
370 2XVF FAD 4.88998
371 2VVL FAD 4.88998
372 4D7E FAD 4.88998
373 5MQ6 NDP 4.88998
374 3ICS ADP 4.88998
375 4HA6 FAD 4.88998
376 4ISS TAR 4.88998
377 1GZ4 ATP 4.90018
378 3KLJ FAD 4.93506
379 1C0I BE2 4.95868
380 1C0I FAD 4.95868
381 2BKX F6R 4.95868
382 5VKT NAP 4.97238
383 3QH2 3NM 4.97738
384 3NYC FAD 4.98688
385 3NYC IAR 4.98688
386 5L95 AMP 5.01792
387 5OJL TXP 5.03356
388 5YEC ATP 5.04202
389 5BSH PRO 5.05415
390 3L4S NAD 5.05952
391 3L4S 3PG 5.05952
392 5TC4 NAD 5.06329
393 2HK9 ATR 5.09091
394 2HK9 NAP 5.09091
395 5KKA 6V0 5.12821
396 6C0B MLI 5.12821
397 3LXD FAD 5.13447
398 4YSX FAD 5.13447
399 4MOP 2H5 5.13447
400 3UOY FAD 5.13447
401 3UOY NAP 5.13447
402 4RSL FAD 5.13447
403 3Q9T FAY 5.13447
404 3QVP FAD 5.13447
405 2JJQ SAH 5.13447
406 4CP8 MLI 5.13447
407 1ZK7 FAD 5.13919
408 5I39 FAD 5.14706
409 5UR0 NAD 5.15759
410 3ABI NAD 5.20548
411 4IF4 BEF 5.28846
412 3HDY FDA 5.28967
413 3HDY GDU 5.28967
414 3HDY FAD 5.28967
415 6F3N ADN 5.29661
416 6F3N NAD 5.29661
417 4E13 NAD 5.30035
418 5Z21 NAI 5.30726
419 2EV9 NAP 5.32319
420 2EV9 SKM 5.32319
421 2G5C NAD 5.33808
422 4OPC PGT 5.37897
423 4OPC FDA 5.37897
424 3NT6 FAD 5.37897
425 3NTA FAD 5.37897
426 3SSO SAH 5.37897
427 2XWL CTP 5.38117
428 1ELI PYC 5.39846
429 4JK3 NAD 5.40541
430 6F3M NAD 5.42299
431 3VYW SAM 5.51948
432 4XDZ NDP 5.53936
433 1U3U NAD 5.61497
434 1U3U BNF 5.61497
435 2VTD LKM 5.61798
436 2QA1 FAD 5.62347
437 2HQM FAD 5.62347
438 5WGR FAD 5.62347
439 1NVT NAP 5.62347
440 6ER9 FAD 5.62347
441 5J5Z FAD 5.62347
442 6ER9 NAP 5.62347
443 5JE8 NAD 5.62914
444 5EES NAP 5.66802
445 3GFB NAD 5.71429
446 1I8T FAD 5.72207
447 1IM8 SAI 5.7377
448 1N1G BCP 5.7377
449 5K0A FAD 5.75758
450 2DFV NAD 5.76369
451 1MJT ITU 5.76369
452 2JBH 5GP 5.77778
453 4YCA NDP 5.78231
454 4J4H NAI 5.79151
455 4J4H 1J1 5.79151
456 3FPZ AHZ 5.82822
457 3CIF NAD 5.84958
458 3CIF G3H 5.84958
459 2DKH FAD 5.86797
460 1FEC FAD 5.86797
461 3NTD FAD 5.86797
462 2DKH 3HB 5.86797
463 1RSG FAD 5.86797
464 1YY5 FAD 5.86797
465 2AQJ FAD 5.86797
466 2AQJ TRP 5.86797
467 4XQC NAD 5.86797
468 4XQC 13D 5.86797
469 5U8U FAD 5.86797
470 6C4N NAP 5.86797
471 3HVJ 705 5.88235
472 1W8D NAP 5.96026
473 3CMC NAD 5.98802
474 5N6C NAD 6
475 4CUB GAL NAG 6.01093
476 5E5U MLT 6.03015
477 4G5H UD7 6.06061
478 4G5H NAP 6.06061
479 1G8S MET 6.08696
480 2F1K NAP 6.09319
481 4USQ FAD 6.09418
482 1SAY PYR 6.09418
483 1MO9 KPC 6.11247
484 1MO9 FAD 6.11247
485 2A8X FAD 6.11247
486 4U8P UDP 6.11247
487 4U8P FDA 6.11247
488 3NKS FAD 6.11247
489 5M67 ADE 6.11247
490 5M67 NAD 6.11247
491 5M67 3D1 6.11247
492 1LVL NAD 6.11354
493 1LVL FAD 6.11354
494 4D3F NAP 6.12903
495 2Q7V FAD 6.15385
496 5TCI MLI 6.15942
497 5H81 NAP 6.16967
498 3BAZ NAP 6.30631
499 3A25 SAM 6.31229
500 2WPF WPF 6.35697
501 2WPF FAD 6.35697
502 5BUK FAD 6.35697
503 2IVD FAD 6.35697
504 3GDN HBX 6.35697
505 3GDN FAD 6.35697
506 1B8U NAD 6.35697
507 3X0D SAH 6.35697
508 1F20 NAP 6.35697
509 1KJ8 GAR 6.39386
510 3GF4 UPG 6.41026
511 3GF4 FAD 6.41026
512 1SC6 NAD 6.43564
513 5JY6 NAD 6.46067
514 4JNA FAD 6.47059
515 6BYF CIT 6.47059
516 5UAV NDP 6.52174
517 5UAV TFB 6.52174
518 3VSE SAH 6.53266
519 1E7S NAP 6.54206
520 3QFA FAD 6.55106
521 4Y9D NAI 6.55738
522 3CTY FAD 6.58307
523 4RDH AMP 6.59722
524 4RDI ATP 6.59722
525 1JNR FAD 6.60147
526 5TTJ FAD 6.60147
527 5YB7 FAD 6.60147
528 2RGH FAD 6.60147
529 5YB7 ORN 6.60147
530 5CAE COA 6.60147
531 1FUT 2GP 6.60377
532 1VDC FAD 6.60661
533 5T9F TYR 6.64207
534 5T9F NAP 6.64207
535 4TQK NAG 6.65025
536 5ZBC FAD 6.65188
537 3AXB PRO 6.69643
538 3AXB FAD 6.69643
539 1SOW NAD 6.70732
540 1FWV SGA MAG FUC 6.71642
541 5E8J SAH 6.81818
542 6FP4 FAD 6.84597
543 1RYI FAD 6.84597
544 1RYI GOA 6.84597
545 2RGO FAD 6.84597
546 6FP4 E1T 6.84597
547 1VBH PEP 6.84597
548 2AOT SAH 6.84932
549 5K4W NAI 6.85358
550 5K4W THR 6.85358
551 5J60 FAD 6.875
552 1D1T NAD 6.97051
553 2HJR APR 7.0122
554 5KVS NAP 7.01299
555 4BIX ADP 7.04698
556 2Q0L NAP 7.07396
557 2Q0L FAD 7.07396
558 1KNR FAD 7.09046
559 2ZXI FAD 7.09046
560 1VQW FAD 7.09046
561 4M52 FAD 7.09046
562 2GVC FAD 7.09046
563 2GV8 FAD 7.09046
564 2GV8 NDP 7.09046
565 4M52 M52 7.09046
566 5BJX NAD 7.10383
567 5BJX UDP 7.10383
568 1HYH NAD 7.11974
569 4PLG NAI 7.18563
570 4PLG OXM 7.18563
571 4GUT FAD 7.25806
572 4GUS FAD 7.25806
573 4HSU FAD 7.25806
574 4B4U NAP 7.26073
575 1F8G NAD 7.29167
576 1BXK NAD 7.32394
577 4YKG NAD 7.33496
578 4YKG FAD 7.33496
579 6F7L FAD 7.33496
580 3H5N ATP 7.36544
581 4CQM NAP 7.37705
582 4XDY NAI 7.39645
583 2VT3 ATP 7.44186
584 2WD7 VGD 7.46269
585 2XVM SAH 7.53769
586 1PN0 IPH 7.57946
587 1PN0 FAD 7.57946
588 4EIP FAD 7.57946
589 4EIP K2C 7.57946
590 5J7X FAD 7.57946
591 3T31 FAD 7.57946
592 3T31 DCQ 7.57946
593 6A3J NAI 7.57946
594 6A3J SOE 7.57946
595 1UH4 GLC GLC GLC GLC GLC GLC 7.57946
596 1TDF NAP 7.59494
597 1TDF FAD 7.59494
598 5EZ7 FAD 7.65306
599 1RP0 AHZ 7.74648
600 1EJ0 SAM 7.77778
601 3GRU AMP 7.79661
602 1E6E FAD 7.8125
603 1D4D FAD 7.82396
604 4IV9 FAD 7.82396
605 5JCA FAD 7.82396
606 5JCA NDP 7.82396
607 1PZG A3D 7.85498
608 1EZ4 NAD 7.86164
609 5E1M SAH 7.88382
610 1ZH8 NAP 7.94118
611 4O0L NDP 8
612 5AJU RP5 8.0292
613 5G6U TRP 8.04598
614 1GUZ NAD 8.06452
615 1GV0 NAD 8.06452
616 5ZYN FAD 8.06846
617 4DSG FAD 8.06846
618 4DSG UDP 8.06846
619 2IID PHE 8.06846
620 2IID FAD 8.06846
621 3K7M FAD 8.06846
622 3WGT FAD 8.06916
623 3WGT QSC 8.06916
624 4DPL NAP 8.07799
625 1UXG NAD 8.09062
626 1UXG FUM 8.09062
627 5Y8L HUI 8.13559
628 5Y8L NAD 8.13559
629 5KMS FAD 8.14815
630 5KMS NAD 8.14815
631 2CUL FAD 8.18966
632 6DWI HD4 8.23045
633 2GAG NAD 8.31296
634 5TS5 FAD 8.31296
635 2GAG FAD 8.31296
636 2GAG FOA 8.31296
637 3F8D FAD 8.35913
638 4BG4 ARG 8.42697
639 3G89 SAM 8.43373
640 2GZ3 NAP 8.46994
641 4NTD FAD 8.52941
642 1ZGS XMM 8.55746
643 6DUB SAH 8.55856
644 5Z75 NAD 8.56269
645 1X7D ORN 8.57143
646 1X7D NAD 8.57143
647 1YKJ PHB 8.62944
648 1YKJ FAD 8.62944
649 3ZNN FAD 8.64553
650 3ZNN 4WL 8.64553
651 4JJF FE9 8.72093
652 4OM8 NAD 8.73786
653 2AG8 NAP 8.74525
654 1O94 ADP 8.75
655 2Q1S NAI 8.75332
656 5JWC FAD 8.80196
657 3S5W FAD 8.80196
658 3S5W NAP 8.80196
659 1REO FAD 8.80196
660 3VPB GLU 8.92857
661 2IOR ADP 8.93617
662 1FK8 NAD 8.94942
663 1XXA ARG 8.97436
664 3G2O SAM 9.0301
665 3HAD NAD 9.09091
666 1EBF NAD 9.21788
667 5OCM NAP 9.27835
668 1YQZ FAD 9.29095
669 1KYQ NAD 9.29095
670 4E5N NAD 9.39394
671 1CER NAD 9.53545
672 4UP3 FAD 9.55414
673 4UP3 NDP 9.55414
674 5ZI9 FLC 9.61539
675 2XYQ SAH 9.65517
676 5N0J FAD 9.68661
677 2HMT NAI 9.72222
678 2YG3 FAD 9.77995
679 1C3V NDP 9.79592
680 4P83 U5P 9.89011
681 3WLE NAD 9.97067
682 3GMB FAD 10.0245
683 4X9M FAD 10.0245
684 5OVK NDP 10.1562
685 3EGI ADP 10.1942
686 2BOS GLA GAL GLC NBU 10.2941
687 3KIF GDL 10.3774
688 1GTE FAD 10.5134
689 4JLS 3ZE 10.5263
690 1O6Z NAD 10.5611
691 2DC1 NAD 10.5932
692 3FUU ADN 10.7011
693 1BZL FAD 10.7579
694 1BZL GCG 10.7579
695 6CI9 F3V 10.8108
696 3QMN A3P 10.8527
697 4ONT SIA GAL BGC 10.8527
698 3WMX NAD 10.8939
699 2PT9 S4M 11.215
700 1U1I NAD 11.2245
701 6AA8 NAD 11.2583
702 1FL2 FAD 11.2903
703 2B9W FAD 11.3208
704 5XVH NAP 11.4379
705 5BRT FAD 11.4914
706 5BRT CH9 11.4914
707 1GET FAD 11.4914
708 1GET NAP 11.4914
709 1A5Z NAD 11.5987
710 6GAS FAD 11.7825
711 3H9E NAD 11.8497
712 2JB2 FAD 11.9804
713 2JB2 PHE 11.9804
714 5ZZ6 ADP 12.0192
715 5ZZ6 NAD 12.0192
716 4II2 ATP 12.0482
717 1PQ7 ARG 12.0536
718 1WP4 NDP 12.1107
719 2CVZ NDP 12.1107
720 5MIT NAP 12.2324
721 5MIT FAD 12.2324
722 2OOR NAD 12.2396
723 1L7E NAI 12.2396
724 1NM5 NAD 12.2396
725 2NU8 COA 12.3711
726 2VYN NAD 12.3867
727 2FKA BEF 12.4031
728 3ITJ CIT 12.426
729 3ITJ FAD 12.426
730 5JCM FAD 12.4694
731 5JCM ISD 12.4694
732 5JCM NAD 12.4694
733 3H8V ATP 12.6712
734 2Z3Y F2N 12.7139
735 3GD4 FAD 12.7139
736 3GD4 NAD 12.7139
737 3GGO NAI 12.7389
738 3GGO ENO 12.7389
739 3WV8 ATP 12.844
740 3GDH SAH 12.8631
741 1PL6 NAD 12.9213
742 1PL6 572 12.9213
743 5NII FAD 12.945
744 1V59 NAD 12.9584
745 1GPE FAD 12.9584
746 4C3Y FAD 12.9584
747 1V59 FAD 12.9584
748 4C3Y ANB 12.9584
749 4USI AKG 12.987
750 2FZW NAD 13.1367
751 4CJX NAP 13.1661
752 4AT0 FAD 13.2029
753 4JDR FAD 13.2029
754 4PLT NAI 13.4474
755 4PLT OXM 13.4474
756 5X20 NAD 13.4615
757 2B4R NAD 13.6232
758 2B4R AES 13.6232
759 4Z0H NAD 13.7725
760 3RNM FAD 13.7931
761 1J0X NAD 13.8554
762 1GAD NAD 14.5455
763 1JAY NAP 15.0943
764 3ORF NAD 15.1394
765 3AD8 NAD 15.1515
766 3AD8 FAD 15.1515
767 3AD8 PYC 15.1515
768 4P86 5GP 15.3005
769 4BJZ FAD 15.3302
770 4BJZ P3A 15.3302
771 1LSS NAD 15.7143
772 3QV1 NAD 15.8537
773 3E1T FAD 15.8924
774 6BQ6 TER 15.8924
775 5BVA FAD 17.1149
776 3A27 SAM 17.2794
777 4ZCC NAI 17.5595
778 4ZCC FAD 17.5595
779 6GNC FAD 18.0272
780 5ODQ FAD 18.5714
781 1M26 GAL A2G 18.797
782 2E5V FAD 20.0489
783 3NOJ PYR 20.1681
784 1LC3 NAD 21.0884
785 2F5Z FAD 23.4375
786 5YRF GLC GLC 24.6479
787 5YRI GLC GLC 24.6479
788 4TM3 FAD 27.5395
789 6AIN FAD 29.4258
790 5EVY FAD 32.5183
791 5Y77 FAD 33.0073
792 5KOX FAD 33.7408
793 5KOX RFP 33.7408
794 5EOW FAD 34.321
795 6FHO FAD 34.3358
796 5MZI FAD 34.7188
797 5MZI FYK 34.7188
798 2RGJ FAD 35.5721
799 5X68 FAD 36.0614
800 5HXI FAD 36.1478
801 5HXI 5HN 36.1478
802 3OZ2 FAD 39.5466
803 2Y6Q FAD 40.201
804 2Y6Q I7T 40.201
805 4J36 1HR 43.2763
806 4J36 FAD 43.2763
Pocket No.: 2; Query (leader) PDB : 5TUF; Ligand: TDC; Similar sites found with APoc: 953
This union binding pocket(no: 2) in the query (biounit: 5tuf.bio2) has 58 residues
No: Leader PDB Ligand Sequence Similarity
1 4RT1 C2E None
2 1ULE GLA GAL NAG None
3 1KOL NAD 1.00503
4 3ULK NDP 1.22249
5 5OF9 ANP 1.22249
6 5KOK SAH 1.25945
7 2OO8 RAJ 1.26183
8 2JHP SAH 1.46699
9 1UWK NAD 1.46699
10 1UWK URO 1.46699
11 5FUI APY 1.51515
12 5YJS SAL 1.53846
13 4DCM SAM 1.6
14 5E9W SAH 1.60256
15 5W7K SAH 1.60256
16 4IGQ THR M3L GLN 1.66667
17 5LD5 NAD 1.67598
18 1KEV NDP 1.7094
19 1PJS NAD 1.71149
20 1PS9 FAD 1.71149
21 1PS9 NAP 1.71149
22 3AYI FAD 1.71149
23 3AYI HCI 1.71149
24 1GQ2 NAP 1.71149
25 1H82 FAD 1.71149
26 1H82 GZZ 1.71149
27 5W3K 9TY 1.76471
28 2ZKJ ADP 1.77665
29 4KOA NDP 1.8018
30 5O4J SAH 1.82482
31 5O4J PJL 1.82482
32 5O4J 9KH 1.82482
33 1E3I CXF 1.8617
34 1CDO NAD 1.87166
35 3OA2 NAD 1.88679
36 4JZ8 CIT 1.89274
37 4MO2 FDA 1.90217
38 4MO2 FAD 1.90217
39 2YY7 NAD 1.92308
40 2IZ1 ATR 1.95599
41 4WOE ADP 1.95599
42 1VJT NAD 1.95599
43 1DIG NAP 1.96078
44 1DIG L37 1.96078
45 2I3G NAP 1.98864
46 2PV7 NAD 2.01342
47 1R37 NAD 2.01729
48 2YX1 SFG 2.08333
49 1Z82 NDP 2.08955
50 1LUA NAP 2.09059
51 1KPH SAH 2.09059
52 4RQU NAD 2.13333
53 4YT4 FE9 2.13333
54 5GZ6 NDP 2.14724
55 5GZ6 7C3 2.14724
56 2CDU ADP 2.20049
57 1DJN ADP 2.20049
58 2CDU FAD 2.20049
59 5UAO FAD 2.20049
60 5G3U FDA 2.20049
61 1O0S NAI 2.20049
62 5G3U ITW 2.20049
63 1OBB NAD 2.20049
64 4YBN FAD 2.23214
65 4DXD 9PC 2.27273
66 1YKF NAP 2.27273
67 1ZEM NAD 2.29008
68 1YJQ NAP 2.31023
69 5EIN NAP 2.32558
70 4ZGS NAD 2.33161
71 3Q3C NAD 2.34114
72 5U5G NAP 2.37288
73 1RM4 NDP 2.37389
74 6CEP NAD 2.39521
75 6CEP OXM 2.39521
76 4MOB ADP 2.40964
77 5A96 GTP 2.40964
78 9LDT NAD 2.40964
79 9LDB NAD 2.40964
80 1LDM NAD 2.43161
81 1L1E SAH 2.43902
82 5VN0 FAD 2.44499
83 5OC1 FAD 2.44499
84 6H3O FAD 2.44499
85 4YNU FAD 2.44499
86 5VN0 NAI 2.44499
87 4YNU LGC 2.44499
88 2NSX IFM 2.44499
89 4B0T ADP 2.44499
90 1P31 EPU 2.44499
91 2YVF NAD 2.45098
92 2YVF FAD 2.45098
93 1X14 NAD 2.49377
94 4HXY NDP 2.51142
95 4D79 ATP 2.53623
96 4DMG SAM 2.54453
97 3A4T SFG 2.55474
98 1DRV A3D 2.5641
99 1NYT NAP 2.58303
100 5ERG SAM 2.61097
101 4IWN GEK 2.62009
102 4M37 SAH 2.62391
103 2YYY NAP 2.62391
104 4M38 SAH 2.62391
105 5NM7 GLY 2.63158
106 4MP8 MLI 2.65487
107 4MP8 NAD 2.65487
108 1N2X SAM 2.65781
109 3PP0 03Q 2.66272
110 4L8V NAP 2.67062
111 4GKV NAD 2.67857
112 3CGB FAD 2.68949
113 2GMH FAD 2.68949
114 4EMI FAD 2.68949
115 5FJN FAD 2.68949
116 3X0V FAD 2.68949
117 5FJN BE2 2.68949
118 1COY FAD 2.68949
119 4MIG G3F 2.68949
120 3CGD NAD 2.68949
121 6F97 FAD 2.68949
122 4EMI NAD 2.68949
123 1QMG APX 2.68949
124 1E5Q NDP 2.68949
125 1COY AND 2.68949
126 3CGD COA 2.68949
127 3CGD FAD 2.68949
128 4MDH NAD 2.69461
129 1J49 NAD 2.7027
130 2AHR NAP 2.7027
131 4KBA 1QM 2.71903
132 5W4W 9WG 2.71903
133 1XHC FAD 2.7248
134 1H2B NAJ 2.78552
135 5G4L NDP 2.7972
136 2A92 NAI 2.80374
137 1F06 2NP 2.8125
138 1F06 NDP 2.8125
139 3GU3 SAH 2.8169
140 1LTH NAD 2.82132
141 2DT5 NAD 2.8436
142 5D9G GLU ASN LEU TYR PHE GLN 2.84553
143 4MCC 21X 2.84553
144 4R38 RBF 2.85714
145 6GAR FAD 2.86533
146 1SDW IYT 2.86624
147 1QY1 PRZ 2.87356
148 3DMH SAM 2.88714
149 3NGL NAP 2.89855
150 5TVA COA 2.91667
151 4BV6 FAD 2.93399
152 2WET FAD 2.93399
153 4RD0 GDP 2.93399
154 1UP7 NAD 2.93399
155 3JU6 ANP 2.93399
156 1V8B NAD 2.93399
157 4B63 ORN 2.93399
158 4B63 FAD 2.93399
159 5ZXD ATP 2.93399
160 4B63 NAP 2.93399
161 1GPM AMP 2.93399
162 5GUD NDP 2.93399
163 3UCL CYH 2.93399
164 3UCL FAD 2.93399
165 3UCL NAP 2.93399
166 5GUD CIT 2.93399
167 1P77 ATR 2.94118
168 5G48 1FL 2.94118
169 4XTX 590 2.96296
170 1CF2 NAP 2.96736
171 4UP4 NDG 2.99252
172 3KB6 NAD 2.99401
173 4POO SAM 3
174 2CDC NAP 3.00546
175 2CDC XYS 3.00546
176 2CDC XYP 3.00546
177 5NUF NAD 3.01205
178 5NUE NAD 3.01205
179 3CBG SAH 3.01724
180 1H5Q NAP 3.01887
181 4YAC NAI 3.0303
182 2ZIF SAM 3.0303
183 3AB1 FAD 3.05556
184 2CVQ NDP 3.0581
185 3DAG FEG 3.07263
186 4H6B 10X 3.07692
187 4LH7 1X8 3.09598
188 1YS4 NAP 3.10734
189 3WWX DIA 3.15186
190 2EJU SAH 3.1746
191 1XPJ TLA 3.1746
192 1MUU NAD 3.17848
193 1MV8 NAD 3.17848
194 3L9W GSH 3.17848
195 2C7G ODP 3.17848
196 3L9W AMP 3.17848
197 2C7G FAD 3.17848
198 6C4M NAP 3.17848
199 2EG5 SAH 3.17848
200 5MPT SAH 3.17848
201 4LHD GLY 3.17848
202 1VM6 NAD 3.17848
203 5Z20 NAI 3.18841
204 1LJ8 NAD 3.24544
205 1M2W NAD 3.24544
206 5AOV NAP 3.27381
207 3QSB 743 3.27869
208 1HDR NAD 3.27869
209 1UAY ADN 3.30579
210 3LZW FAD 3.31325
211 1V6A TRE 3.31325
212 3LZW NAP 3.31325
213 5YF1 SFG 3.31492
214 4USR FAD 3.3241
215 4LOO SB4 3.3241
216 1VI2 NAD 3.33333
217 5DQ8 FLF 3.33333
218 5FPE 3TR 3.35917
219 1BW9 NAD 3.37079
220 1BXG NAD 3.37079
221 3C3Y SAH 3.37553
222 1C1X NAD 3.38028
223 1XCL SAH 3.40426
224 1I36 NAP 3.40909
225 2D2I NAP 3.42105
226 2O4C NAD 3.42105
227 3LAD