Receptor
PDB id Resolution Class Description Source Keywords
5OFI 2 Å NON-ENZYME: OTHER PLLA LECTIN, FLUOROPHORE CARBOHYDRATE COMPLEX PHOTORHABDUS LUMINESCENS PIIA COMPLEX LECTIN SUGAR BINDING PROTEIN
Ref.: PHOTORHABDUS LUMINESCENS LECTIN A (PLLA): A NEW PRO DETECTING ALPHA-GALACTOSIDE-TERMINATING GLYCOCONJUG J. BIOL. CHEM. V. 292 19935 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
9TQ B:202;
C:202;
A:202;
D:202;
 Valid;
Valid;
Valid;
Valid;
 none;
none;
none;
none;
 Kd = 62.7 uM
614.62 C29 H30 N2 O11 S c1cc(...
CA B:201;
E:201;
D:201;
H:201;
F:201;
A:201;
C:201;
G:201;
 Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
 none;
none;
none;
none;
none;
none;
none;
none;
 submit data
40.078 Ca [Ca+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5OFI 2 Å NON-ENZYME: OTHER PLLA LECTIN, FLUOROPHORE CARBOHYDRATE COMPLEX PHOTORHABDUS LUMINESCENS PIIA COMPLEX LECTIN SUGAR BINDING PROTEIN
Ref.: PHOTORHABDUS LUMINESCENS LECTIN A (PLLA): A NEW PRO DETECTING ALPHA-GALACTOSIDE-TERMINATING GLYCOCONJUG J. BIOL. CHEM. V. 292 19935 2017
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1610 families.
1 5OFI Kd = 62.7 uM 9TQ C29 H30 N2 O11 S c1cc(c(cc1....
2 5OFX ic50 = 0.11 mM FRU GLC GLA n/a n/a
3 5ODU ic50 = 0.52 mM AMG C7 H14 O6 CO[C@@H]1[....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1331 families.
1 5OFI Kd = 62.7 uM 9TQ C29 H30 N2 O11 S c1cc(c(cc1....
2 5OFX ic50 = 0.11 mM FRU GLC GLA n/a n/a
3 5ODU ic50 = 0.52 mM AMG C7 H14 O6 CO[C@@H]1[....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1144 families.
1 5OFI Kd = 62.7 uM 9TQ C29 H30 N2 O11 S c1cc(c(cc1....
2 5OFX ic50 = 0.11 mM FRU GLC GLA n/a n/a
3 5ODU ic50 = 0.52 mM AMG C7 H14 O6 CO[C@@H]1[....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: 9TQ; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 9TQ 1 1
Similar Ligands (3D)
Ligand no: 1; Ligand: 9TQ; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5OFI; Ligand: 9TQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 5ofi.bio1) has 12 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 5OFI; Ligand: 9TQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 5ofi.bio1) has 11 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 5OFI; Ligand: 9TQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 5ofi.bio3) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 5OFI; Ligand: 9TQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 5ofi.bio3) has 11 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 5OFI; Ligand: 9TQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 5ofi.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 5OFI; Ligand: 9TQ; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 5ofi.bio2) has 11 residues
No: Leader PDB Ligand Sequence Similarity
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