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Receptor
PDB id Resolution Class Description Source Keywords
5M7P 2.36 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF NTRX FROM BRUCELLA ABORTUS IN COMPLEX W PROCESSED WITH THE CRYSTALDIRECT AUTOMATED MOUNTING AND CRYT ECHNOLOGY BRUCELLA ABORTUS STR. 2308 A CRYSTALDIRECT SIGNALING PROTEIN BRUCELLOSIS TWO-COMPONENT
Ref.: THREE-DIMENSIONAL STRUCTURE OF FULL-LENGTH NTRX, AN MEMBER OF THE NTRC FAMILY OF RESPONSE REGULATORS. J. MOL. BIOL. V. 429 1192 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MG A:501;
B:501;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
ADP A:502;
B:502;
Valid;
Valid;
none;
none;
Kd = 70 uM
427.201 C10 H15 N5 O10 P2 c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5M7P 2.36 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF NTRX FROM BRUCELLA ABORTUS IN COMPLEX W PROCESSED WITH THE CRYSTALDIRECT AUTOMATED MOUNTING AND CRYT ECHNOLOGY BRUCELLA ABORTUS STR. 2308 A CRYSTALDIRECT SIGNALING PROTEIN BRUCELLOSIS TWO-COMPONENT
Ref.: THREE-DIMENSIONAL STRUCTURE OF FULL-LENGTH NTRX, AN MEMBER OF THE NTRC FAMILY OF RESPONSE REGULATORS. J. MOL. BIOL. V. 429 1192 2017
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 5M7P Kd = 70 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 5M7P Kd = 70 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 3DZD - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
2 1NY5 - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
3 5M7P Kd = 70 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ADP; Similar ligands found: 452
No: Ligand ECFP6 Tc MDL keys Tc
1 ADP 1 1
2 HEJ 0.9 1
3 ATP 0.9 1
4 A2D 0.895522 0.971831
5 5FA 0.887324 1
6 AQP 0.887324 1
7 AP5 0.884058 0.971831
8 B4P 0.884058 0.971831
9 BA3 0.869565 0.971831
10 AN2 0.84507 0.985915
11 AT4 0.84507 0.958904
12 M33 0.833333 0.958333
13 ACQ 0.826667 0.972222
14 A 0.823529 0.971429
15 AMP 0.823529 0.971429
16 ACP 0.821918 0.972222
17 6YZ 0.818182 0.972222
18 APR 0.810811 0.971831
19 AR6 0.810811 0.971831
20 ANP 0.802632 0.972222
21 SAP 0.8 0.945946
22 AGS 0.8 0.945946
23 AD9 0.8 0.972222
24 ADX 0.783784 0.873418
25 CA0 0.783784 0.945205
26 TAT 0.779221 0.958904
27 T99 0.779221 0.958904
28 50T 0.773333 0.958333
29 ABM 0.763889 0.917808
30 APC 0.763158 0.958904
31 PRX 0.763158 0.893333
32 ATF 0.759494 0.958904
33 A22 0.753086 0.985915
34 AP2 0.743243 0.958904
35 A12 0.743243 0.958904
36 SRA 0.736111 0.918919
37 ADQ 0.73494 0.945205
38 25L 0.732558 0.985915
39 5AL 0.725 0.931507
40 2A5 0.717949 0.918919
41 A1R 0.714286 0.907895
42 AU1 0.714286 0.972222
43 A3R 0.714286 0.907895
44 ATR 0.708861 0.971429
45 ADP PO3 0.708861 0.943662
46 PAP 0.708861 0.985714
47 SRP 0.707317 0.906667
48 7D3 0.706667 0.905405
49 25A 0.702381 0.971831
50 9X8 0.697674 0.92
51 OAD 0.697674 0.945205
52 RBY 0.6875 0.932432
53 ADV 0.6875 0.932432
54 00A 0.686047 0.883117
55 OOB 0.682353 0.931507
56 5SV 0.682353 0.848101
57 8QN 0.682353 0.931507
58 3OD 0.681818 0.945205
59 BIS 0.681818 0.933333
60 ALF ADP 0.674699 0.87013
61 ADP ALF 0.674699 0.87013
62 AMO 0.674419 0.932432
63 4AD 0.674419 0.92
64 PAJ 0.674419 0.884615
65 GAP 0.670732 0.893333
66 MAP 0.670588 0.945946
67 AHX 0.666667 0.896104
68 VO4 ADP 0.666667 0.931507
69 DLL 0.666667 0.931507
70 ADP VO4 0.666667 0.931507
71 PTJ 0.662921 0.896104
72 3UK 0.659091 0.918919
73 SON 0.658228 0.932432
74 LMS 0.653333 0.82716
75 LAD 0.651685 0.860759
76 WAQ 0.651685 0.883117
77 B5V 0.651685 0.906667
78 PR8 0.651685 0.85
79 ITT 0.65 0.943662
80 7D4 0.65 0.905405
81 G5P 0.648936 0.921053
82 XYA 0.647059 0.84507
83 ADN 0.647059 0.84507
84 RAB 0.647059 0.84507
85 1ZZ 0.644444 0.839506
86 ME8 0.644444 0.839506
87 FYA 0.644444 0.905405
88 NB8 0.644444 0.896104
89 TXA 0.644444 0.932432
90 6AD 0.642857 0.909091
91 ADP BMA 0.640449 0.918919
92 G3A 0.638298 0.921053
93 DAL AMP 0.632184 0.905405
94 AFH 0.631579 0.884615
95 9SN 0.630435 0.871795
96 9ZA 0.625 0.907895
97 DQV 0.625 0.958333
98 9ZD 0.625 0.907895
99 GTA 0.625 0.886076
100 YAP 0.623656 0.894737
101 B5M 0.623656 0.894737
102 FA5 0.623656 0.906667
103 B5Y 0.623656 0.894737
104 UP5 0.622449 0.92
105 HFD 0.619048 0.945946
106 XAH 0.617021 0.839506
107 AV2 0.616279 0.917808
108 AOC 0.615385 0.821918
109 48N 0.612245 0.896104
110 4UV 0.610526 0.894737
111 6V0 0.606061 0.896104
112 NAI 0.606061 0.907895
113 DND 0.606061 0.932432
114 NAX 0.606061 0.873418
115 NXX 0.606061 0.932432
116 TXD 0.606061 0.907895
117 5N5 0.605634 0.819444
118 5AS 0.604938 0.77907
119 A4P 0.60396 0.843373
120 DAT 0.60241 0.905405
121 A2R 0.602273 0.985915
122 TXE 0.6 0.907895
123 OMR 0.6 0.851852
124 4UU 0.597938 0.894737
125 GA7 0.597938 0.906667
126 A A 0.597826 0.944444
127 A4D 0.597222 0.819444
128 5CD 0.597222 0.805556
129 AP0 0.594059 0.896104
130 4TC 0.594059 0.896104
131 A3P 0.592593 0.971429
132 T5A 0.592233 0.841463
133 139 0.592233 0.873418
134 7D5 0.592105 0.878378
135 ATP A A A 0.589474 0.930556
136 LAQ 0.585859 0.839506
137 MYR AMP 0.585106 0.817073
138 F2R 0.580952 0.864198
139 YLP 0.58 0.819277
140 UPA 0.578431 0.907895
141 7DD 0.578313 0.985714
142 3AM 0.576923 0.929577
143 ADJ 0.576923 0.851852
144 COD 0.575472 0.811765
145 NAD 0.575472 0.931507
146 3AT 0.574713 0.971831
147 JB6 0.574468 0.883117
148 4UW 0.574257 0.860759
149 EP4 0.573333 0.753247
150 A2P 0.573171 0.957143
151 CNA 0.571429 0.932432
152 TYM 0.568627 0.906667
153 PPS 0.568182 0.873418
154 DTA 0.565789 0.786667
155 M2T 0.565789 0.734177
156 AR6 AR6 0.565657 0.917808
157 A3D 0.564815 0.918919
158 80F 0.564815 0.841463
159 3DH 0.564103 0.773333
160 G5A 0.563218 0.77907
161 YLB 0.563107 0.819277
162 YLC 0.563107 0.839506
163 AMP DBH 0.561224 0.893333
164 TYR AMP 0.561224 0.87013
165 MTA 0.558442 0.773333
166 DTP 0.556818 0.905405
167 AHZ 0.554455 0.817073
168 NA7 0.553191 0.958904
169 IOT 0.552381 0.831325
170 ZAS 0.55 0.766234
171 7MD 0.55 0.8625
172 ARG AMP 0.55 0.829268
173 IMO 0.548781 0.929577
174 YLA 0.54717 0.819277
175 NAE 0.544643 0.894737
176 TAD 0.544554 0.884615
177 A5A 0.544444 0.807229
178 2AM 0.544304 0.943662
179 TSB 0.543478 0.819277
180 6RE 0.54321 0.759494
181 AYB 0.542056 0.809524
182 NAQ 0.539823 0.871795
183 V3L 0.539326 0.971831
184 SSA 0.538462 0.8
185 AF3 ADP 3PG 0.538462 0.8375
186 ZID 0.535088 0.918919
187 LPA AMP 0.533981 0.817073
188 52H 0.532609 0.77907
189 VMS 0.532609 0.788235
190 54H 0.532609 0.788235
191 BTX 0.53211 0.841463
192 A3N 0.53012 0.786667
193 J7C 0.53012 0.769231
194 5X8 0.528736 0.763158
195 BT5 0.527273 0.831325
196 8X1 0.526882 0.752809
197 5CA 0.526882 0.8
198 53H 0.526882 0.77907
199 ARU 0.526316 0.860759
200 EAD 0.525862 0.873418
201 RGT 0.525253 0.958904
202 OVE 0.52439 0.905405
203 S4M 0.52381 0.666667
204 7DT 0.522727 0.985714
205 GDP 0.522222 0.92
206 DDS 0.522222 0.878378
207 AVV 0.521277 0.896104
208 NDE 0.521008 0.932432
209 7MC 0.518868 0.841463
210 DSH 0.518072 0.725
211 MAO 0.517647 0.759036
212 NSS 0.515789 0.8
213 DSZ 0.515789 0.8
214 LSS 0.515789 0.761364
215 P5A 0.515464 0.744444
216 DZD 0.513514 0.884615
217 NVA LMS 0.510417 0.752809
218 9K8 0.510204 0.714286
219 12D 0.509615 0.785714
220 M24 0.508772 0.85
221 YLY 0.508772 0.809524
222 P1H 0.508333 0.851852
223 5AD 0.506849 0.746479
224 GJV 0.505882 0.75
225 LEU LMS 0.505155 0.752809
226 AMP NAD 0.504505 0.905405
227 4TA 0.504505 0.807229
228 G A A A 0.504505 0.871795
229 NAJ PZO 0.504425 0.848101
230 GSU 0.5 0.77907
231 128 0.5 0.776471
232 KAA 0.5 0.752809
233 71V 0.5 0.907895
234 A3G 0.5 0.8
235 NDC 0.5 0.871795
236 7D7 0.5 0.743243
237 N0B 0.495726 0.819277
238 NJP 0.495495 0.945946
239 ODP 0.495495 0.909091
240 2SA 0.494624 0.932432
241 6C6 0.494505 0.881579
242 SFG 0.494382 0.75
243 0WD 0.491071 0.921053
244 YSA 0.490196 0.77907
245 PO4 PO4 A A A A PO4 0.489796 0.902778
246 SAM 0.48913 0.690476
247 6IA 0.48913 0.8375
248 A7D 0.488636 0.776316
249 6FA 0.488 0.841463
250 FB0 0.487805 0.804598
251 NAJ PYZ 0.487179 0.807229
252 A5D 0.483516 0.786667
253 IDP 0.483516 0.918919
254 SA8 0.483516 0.707317
255 PGS 0.483146 0.883117
256 MHZ 0.483146 0.697674
257 DA 0.482353 0.878378
258 D5M 0.482353 0.878378
259 NEC 0.482353 0.746667
260 NIA 0.481928 0.822785
261 Y3J 0.480519 0.726027
262 8PZ 0.480392 0.8
263 FAD 0.480315 0.851852
264 FAS 0.480315 0.851852
265 FDA 0.48 0.833333
266 N6P 0.479592 0.915493
267 GGZ 0.479167 0.825
268 U A 0.478261 0.907895
269 SAH 0.478261 0.74359
270 SAI 0.478261 0.734177
271 A G 0.477876 0.883117
272 NPW 0.477477 0.886076
273 NDP 0.477477 0.921053
274 AAM 0.476744 0.971429
275 C2R 0.47561 0.90411
276 AMZ 0.47561 0.916667
277 A A A 0.474747 0.905405
278 GTP 0.473684 0.92
279 U A G G 0.473684 0.883117
280 SMM 0.473684 0.686047
281 NZQ 0.473214 0.909091
282 TXP 0.473214 0.921053
283 A3S 0.47191 0.810811
284 SFD 0.46875 0.734043
285 AIR 0.468354 0.901408
286 AAT 0.468085 0.707317
287 EEM 0.468085 0.690476
288 J7V 0.466667 0.833333
289 Z5A 0.466667 0.77907
290 7C5 0.466667 0.818182
291 62F 0.465649 0.8625
292 HDV 0.463158 0.893333
293 FAY 0.462121 0.8625
294 A3T 0.461538 0.821918
295 ETB 0.461538 0.833333
296 DCA 0.461538 0.823529
297 A6D 0.46 0.722892
298 A U 0.459459 0.87013
299 GEK 0.459184 0.7375
300 6K6 0.459184 0.930556
301 RFL 0.458647 0.821429
302 NAP 0.458333 0.945205
303 S7M 0.458333 0.690476
304 4YB 0.457944 0.761364
305 WSA 0.454545 0.788235
306 TAP 0.454545 0.907895
307 FNK 0.454545 0.804598
308 COA 0.453782 0.823529
309 0T1 0.453782 0.823529
310 101 0.453488 0.878378
311 XNP 0.452174 0.873418
312 NA0 0.45082 0.932432
313 7RP 0.448276 0.928571
314 GP3 0.446809 0.921053
315 TM1 0.446602 0.77381
316 APU 0.446429 0.894737
317 PUA 0.445378 0.884615
318 V1N 0.443396 0.917808
319 7RA 0.443182 0.957747
320 COS 0.442623 0.804598
321 AMX 0.442623 0.833333
322 30N 0.442623 0.752688
323 CAO 0.442623 0.795455
324 QQY 0.44186 0.815789
325 ACK 0.44186 0.861111
326 649 0.441441 0.744444
327 0UM 0.44 0.698795
328 NHD 0.439655 0.905405
329 CMX 0.439024 0.823529
330 SCO 0.439024 0.823529
331 GCP 0.438776 0.896104
332 8BR 0.438202 0.906667
333 GNH 0.4375 0.907895
334 8Q2 0.4375 0.772727
335 3AD 0.4375 0.805556
336 NVA 2AD 0.43617 0.759494
337 62X 0.435644 0.666667
338 FCX 0.435484 0.795455
339 ACO 0.435484 0.795455
340 FAM 0.435484 0.804598
341 9JJ 0.434783 0.8625
342 GNP 0.434343 0.896104
343 9GM 0.434343 0.896104
344 NMX 0.433071 0.76087
345 MGP 0.43299 0.884615
346 26A 0.432099 0.763158
347 HAX 0.432 0.804598
348 K15 0.431373 0.682353
349 DG1 0.430894 0.921053
350 1DG 0.430894 0.921053
351 QQX 0.430233 0.805195
352 2VA 0.430108 0.8
353 S8M 0.43 0.759494
354 2MC 0.429688 0.769231
355 6G0 0.428571 0.884615
356 P5F 0.428571 0.823529
357 FYN 0.428571 0.823529
358 3KK 0.428571 0.804598
359 A C A C 0.428571 0.848101
360 7L1 0.427419 0.795455
361 FAI 0.426966 0.916667
362 RMB 0.426966 0.873239
363 AS 0.426966 0.833333
364 1RB 0.425287 0.885714
365 CA6 0.425197 0.729167
366 SOP 0.425197 0.804598
367 OXK 0.425197 0.804598
368 MCD 0.425197 0.804598
369 COK 0.425197 0.804598
370 G1R 0.424242 0.907895
371 SXZ 0.423077 0.710843
372 CC5 0.423077 0.816901
373 F2N 0.422535 0.813953
374 EO7 0.422222 0.788235
375 ANZ 0.422018 0.8
376 1VU 0.421875 0.795455
377 CMC 0.421875 0.804598
378 CO6 0.421875 0.804598
379 ZDA 0.421053 0.864865
380 GKE 0.420561 0.884615
381 GDC 0.420561 0.884615
382 GDD 0.420561 0.884615
383 NFD 0.420168 0.883117
384 GSP 0.42 0.873418
385 D3Y 0.42 0.789474
386 MC4 0.419847 0.76087
387 3D1 0.419753 0.773333
388 3L1 0.419753 0.773333
389 FA9 0.41958 0.864198
390 5GP 0.419355 0.906667
391 G 0.419355 0.906667
392 KB1 0.419048 0.698795
393 CAJ 0.418605 0.804598
394 SCD 0.418605 0.823529
395 CMP 0.417582 0.901408
396 2BA 0.417582 0.915493
397 SO8 0.416667 0.789474
398 VRT 0.416667 0.769231
399 N01 0.416667 0.905405
400 IVC 0.415385 0.813953
401 1HE 0.415385 0.786517
402 A1S 0.415385 0.804598
403 BCO 0.415385 0.804598
404 3HC 0.415385 0.813953
405 MLC 0.415385 0.804598
406 NMN AMP PO4 0.415254 0.87013
407 2FA 0.414634 0.813333
408 MGO 0.414141 0.860759
409 3NZ 0.413462 0.782051
410 COO 0.412214 0.804598
411 MCA 0.412214 0.795455
412 YE1 0.412214 0.813953
413 CAA 0.412214 0.813953
414 GAV 0.411765 0.884615
415 PRT 0.411215 0.931507
416 JLN 0.411111 0.890411
417 P2P 0.411111 0.902778
418 ZZB 0.410256 0.77381
419 SP1 0.409091 0.842105
420 RP1 0.409091 0.842105
421 2CP 0.409091 0.795455
422 SCA 0.409091 0.804598
423 103 0.409091 0.837838
424 PAX 0.408 0.829268
425 FAD NBT 0.407143 0.75
426 COW 0.406015 0.795455
427 3CP 0.406015 0.804598
428 IRC 0.406015 0.813953
429 BYC 0.406015 0.804598
430 CA8 0.406015 0.729167
431 1GZ 0.406015 0.795455
432 COF 0.406015 0.786517
433 HGG 0.406015 0.804598
434 2KQ 0.406015 0.786517
435 G2P 0.405941 0.884615
436 SLU 0.404959 0.770115
437 U A C C 0.404959 0.858974
438 RBZ 0.404494 0.849315
439 1CZ 0.404412 0.795455
440 FAQ 0.402985 0.804598
441 BCA 0.402985 0.795455
442 4CA 0.402985 0.795455
443 MTP 0.402439 0.730769
444 8OD 0.402062 0.945205
445 CO7 0.401515 0.804598
446 GRA 0.4 0.804598
447 G2R 0.4 0.884615
448 ENQ 0.4 0.916667
449 CNV FAD 0.4 0.8
450 GMV 0.4 0.896104
451 HXC 0.4 0.786517
452 HF7 0.4 0.893333
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5M7P; Ligand: ADP; Similar sites found with APoc: 552
This union binding pocket(no: 1) in the query (biounit: 5m7p.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
1 1GXU 2HP None
2 5AK0 8V1 0.881057
3 1F5N GNP 1.32159
4 4A4Z ANP 1.32159
5 2BIF ANP 1.54185
6 2BIF SIN 1.54185
7 4ZDJ UTP 1.54185
8 1NHX FTB 1.54185
9 1NHX PEP 1.54185
10 2GMV UN8 1.54185
11 2GMV PEP 1.54185
12 3FYH ADP 1.5528
13 2NCD ADP 1.66667
14 2RCN GDP 1.67598
15 1SVK ALF GDP 1.69972
16 3MJH GTP 1.78571
17 4FRZ ADP 1.81347
18 1G6O ADP 1.81818
19 1Y3A GDP 1.82371
20 2B8W ALF 5GP 1.82927
21 1ZIN AP5 1.84332
22 2OM2 GDP 1.84615
23 1K6M AGS 1.85185
24 2GDJ ANP 1.89394
25 1BH2 GSP 1.90476
26 4GOX A3P 1.91693
27 4B47 GDP 1.92837
28 3FVQ ATP 1.94986
29 4PJ3 ANP 1.98238
30 5YVT NAI 2.0649
31 3TK1 GDP 2.12121
32 6AU6 GDP 2.12202
33 5KSZ GCP 2.12264
34 3BD9 A3P 2.14286
35 3COB ADP 2.16802
36 2ZFI ADP 2.18579
37 2WHX ADP 2.20264
38 3TBK ANP 2.20264
39 2OG2 MLI 2.22841
40 3FWY ADP 2.2293
41 5NM7 GLY 2.25564
42 2XTZ GSP 2.25989
43 2HT6 GDP 2.29885
44 6CS8 F9Y 2.31023
45 6B4K ANP 2.32558
46 1LFD GNP 2.39521
47 4PX9 ADP 2.39726
48 1CLU DBG 2.40964
49 1WQ1 GDP 2.40964
50 1YQT ADP 2.42291
51 5ZXD ATP 2.42291
52 5BN3 ADP 2.42291
53 1XKV ATP 2.42291
54 1LVK MNT BEF 2.42291
55 5I0H ADP BEF 2.42291
56 1IHU AF3 2.42291
57 1IHU ADP 2.42291
58 1V8K ANP 2.43902
59 2JK0 ASP 2.46154
60 1TAD GDP 2.46914
61 1TAD ALF 2.46914
62 1ION ADP 2.46914
63 5LB3 ADP 2.47191
64 1MKY GDP 2.50569
65 2ORV 4TA 2.5641
66 2WIC GNP 2.62172
67 4IHQ ADP 2.64317
68 2ZPA ADP 2.64317
69 1OS1 PYR 2.64317
70 1OS1 ATP 2.64317
71 1QHG ATP 2.64317
72 2FSH ANP 2.64317
73 2ZJ5 ADP 2.64317
74 3B9Q MLI 2.64901
75 1RRC ADP 2.65781
76 1DAK ADP 2.67857
77 1DAK DPU 2.67857
78 2ZPT A3P 2.71186
79 5L3R GCP 2.73038
80 3KJI ADP 2.75591
81 1YZG GDP 2.7933
82 4X8O AP5 2.80374
83 4BFW ZVW 2.83019
84 4Q1A 2XZ 2.85714
85 4Q1A UDP 2.85714
86 4R43 GDP 2.8754
87 4LPS GDP 2.89256
88 1VG0 GDP 2.89855
89 1VG8 GNP 2.89855
90 1G16 GDP 2.94118
91 3QKT ANP 2.94985
92 5L3V GDP 3.01003
93 3Q72 GNP 3.01205
94 2AWN ADP 3.0837
95 5N69 ADP 3.0837
96 5BYK OAQ 3.0888
97 5BYK A3P 3.0888
98 1FP6 ADP 3.11419
99 5CK5 GDP 3.16456
100 5ZBR ANP 3.2
101 3BER AMP 3.21285
102 5Z69 AGS 3.22581
103 1VG1 GDP 3.24324
104 1VG9 GDP 3.24324
105 2Y65 ADP 3.28767
106 5FG3 GDP 3.30396
107 3RC3 ANP 3.30396
108 4R98 GNH 3.32103
109 2YOH WMJ 3.33333
110 1X8J A3P 3.4188
111 5X40 ACP 3.42466
112 1VKJ A3P 3.50877
113 5HR5 ADP 3.52423
114 5UIV ADP 3.52423
115 1OYY AGS 3.52423
116 1Q19 SSC 3.52423
117 2QTV GNP 3.59281
118 1P72 ADP 3.59281
119 1FNN ADP 3.59897
120 1QF9 C5P 3.60825
121 1QF9 ADP 3.60825
122 1QF9 ALF 3.60825
123 1WF3 GNP 3.65448
124 1NRJ GTP 3.66972
125 2JBM SRT 3.67893
126 4MKF AP5 3.68664
127 2IXE ATP 3.69004
128 2GWH A3P 3.69128
129 3FB4 AP5 3.7037
130 1D5C GDP 3.7037
131 3KUD GDP 3.7037
132 5UQW GDP 3.7037
133 1SVM ATP 3.71353
134 2VVG ADP 3.71429
135 4TTQ ATP 3.72093
136 1DAR GDP 3.74449
137 5MZN ADP 3.74449
138 3QDK QDK 3.74449
139 4TMK T5A 3.75587
140 5U32 GDP 3.81356
141 1JJ7 ADP 3.84615
142 3T5G GDP 3.8674
143 2DPY ADP 3.88128
144 1VDC FAD 3.9039
145 6BSX E7S 3.93258
146 6BSX GDP 3.93258
147 1UKZ ADP 3.94089
148 1X6V ADP 3.96476
149 1T5C ADP 4.01146
150 2QG6 NMN 4.0201
151 1T8U UAP SGN IDS SGN 4.04412
152 1T8U A3P 4.04412
153 3EC1 GDP 4.06504
154 3DKP ADP 4.08163
155 1FQJ GDP 4.08163
156 1FQK GDP 4.08163
157 3PQC GDP 4.10256
158 1U0J ADP 4.11985
159 5O2T GSP 4.14201
160 3RAB GNP 4.14201
161 4LC1 GDP 4.1543
162 2IS6 ADP 4.18502
163 2FAH GDP 4.18502
164 1Z6T ADP 4.18502
165 2XAU ADP 4.18502
166 2D7D ADP 4.18502
167 1NN5 2DT 4.18605
168 1NN5 ANP 4.18605
169 4LAE 1VM 4.19162
170 4LAE NAP 4.19162
171 1ZD9 GDP 4.25532
172 2XTN GTP 4.2735
173 3RWO GDP 4.32432
174 4TL6 ANP 4.34783
175 3DC4 ADP 4.36047
176 1UJ2 ADP 4.36508
177 1UJ2 C5P 4.36508
178 1JJV ATP 4.36893
179 1CR1 TTP 4.39189
180 1W0J ADP 4.41176
181 1W0J ADP BEF 4.41176
182 4TO8 FLC 4.45205
183 1XMV ADP 4.49438
184 3GJ4 GDP 4.52489
185 3GJ0 GDP 4.52489
186 1E2K TMC 4.53172
187 1AKY AP5 4.54545
188 2G77 GDP 4.54545
189 4DDY DN6 4.56274
190 1SKQ GDP 4.5977
191 2GK6 ADP 4.62555
192 4DCT GDP 4.62555
193 4IDN GNP 4.62555
194 4YS0 ADP 4.62555
195 5HSA FAS 4.62555
196 1IBR GNP 4.62963
197 1XEX ATP 4.65116
198 2Z5F A3P 4.69799
199 5M04 GDP 4.72222
200 5KSP GDP 4.73684
201 1Z06 GNP 4.7619
202 1H65 GDP 4.81482
203 2WKQ GTP 4.81928
204 5TSH ADP 4.84582
205 5TSH ANP 4.84582
206 2HF9 GSP 4.86726
207 2ZR9 DTP 4.87106
208 4H1V GNP 4.87805
209 1XP8 AGS 4.91803
210 2XT3 ADP 4.94186
211 2W58 ADP 4.9505
212 4GBM A3P 4.95356
213 2GCO GNP 4.97512
214 2GCN GDP 4.97512
215 5HCN GCP 4.98084
216 1JI0 ATP 5
217 5WRI A3P 5
218 1Z0F GDP 5.02793
219 1VHT BA3 5.04587
220 4WZA ACP 5.06608
221 4WZA ADP 5.06608
222 3BFX A3P 5.06757
223 3MD0 GDP 5.07042
224 3QVV A3P 5.08475
225 3QVV 3QV 5.08475
226 1G3M A3P 5.10204
227 1G3M PCQ 5.10204
228 5XC5 GTP 5.11364
229 2J5V PCA 5.17711
230 4KFU ACP 5.18868
231 2J0V GDP 5.18868
232 3H86 AP5 5.20833
233 2GJ8 ALF GDP 5.23256
234 5Y6N ADP 5.25114
235 4NCN GTP 5.25164
236 3IUY AMP 5.26316
237 5WRJ A3P 5.28053
238 4OI4 ATP 5.29801
239 3DEF GDP 5.34351
240 3A4M ADP 5.38462
241 1KAO GDP 5.38922
242 3ZFD ANP 5.41311
243 3E70 GDP 5.4878
244 2PL3 ADP 5.50847
245 3AB3 GDP 5.52486
246 4NU0 AP5 5.52995
247 1NE7 16G 5.53633
248 1BG2 ADP 5.53846
249 1D2E GDP 5.54156
250 2JLR ANP 5.54324
251 5H4S RAM 5.6338
252 1WA5 GTP 5.68182
253 1OIV GDP 5.75916
254 1OIX GDP 5.75916
255 4RD0 GDP 5.78313
256 3BOS CDP 5.78512
257 3QXC ATP 5.78512
258 3A1S GDP 5.81395
259 5BQ5 ADP BEF 5.82011
260 1W5T ANP 5.82524
261 1W5T ADP 5.82524
262 1D8T GDP 5.85242
263 2BVN GNP 5.85242
264 1RYH GNP 5.91133
265 1RJ9 GCP 5.92105
266 1NVV GNP 5.94714
267 6BVM GNP 5.94714
268 6D5V GNP 5.94714
269 6D5G GNP 5.94714
270 6BVK GNP 5.94714
271 6D5H GNP 5.94714
272 6BVL GNP 5.94714
273 6D5L GNP 5.94714
274 6BVI GNP 5.94714
275 6D59 GNP 5.94714
276 6BVJ GNP 5.94714
277 6D56 GNP 5.94714
278 6D5M GNP 5.94714
279 6D5J GNP 5.94714
280 6D5E GNP 5.94714
281 6D55 GNP 5.94714
282 1YTM ATP 5.94714
283 4IEE AGS 5.94714
284 1Z2A GDP 5.95238
285 1L2T ATP 5.95745
286 2CDN ADP 5.97015
287 5XKT GNP 6
288 2F9L GDP 6.03015
289 1TQ4 GDP 6.05327
290 3B7G ANP 6.08696
291 1NF3 GNP 6.15385
292 4NON GDP 6.15385
293 1X1R GDP 6.17978
294 5XQL C2E 6.18557
295 5L3W GDP 6.20915
296 1OW3 GDP 6.21762
297 1GRN GDP 6.28272
298 1A4R GNH 6.28272
299 1A4R GDP 6.28272
300 4ITR GDP 6.28272
301 5BXQ GDP 6.29921
302 4KBF AMP 6.30137
303 2IYL GDP 6.33803
304 2HV8 GTP 6.39535
305 2NGR GDP 6.41026
306 3SBD GNP 6.41711
307 5L3S GNP 6.41892
308 5L3S G 6.41892
309 1TU3 GNP 6.43275
310 4MKG AP5 6.45161
311 1MH1 GNP 6.45161
312 1NST A3P 6.46154
313 1R2Q GNP 6.47059
314 3TMK T5A 6.48148
315 4D0N GDP 6.48649
316 5UPK GNP 6.48649
317 5HPY GDP 6.48649
318 1G4U GDP 6.52174
319 3GJ8 GDP 6.52174
320 1KMQ GNP 6.52174
321 1OE0 TTP 6.52174
322 1GUA GNP 6.58683
323 2D7C GTP 6.58683
324 3P4X ADP 6.60793
325 6DEF GCP 6.64962
326 1W4R TTP 6.66667
327 4QRH 0O2 6.66667
328 4U5X GNP 6.74157
329 3DDC GNP 6.74847
330 1F2U ATP 6.75676
331 1TX4 ALF GDP 6.77966
332 2XZ9 PYR 6.79012
333 1NJF ADP 6.8
334 1NJF AGS 6.8
335 3RLF ANP 6.84211
336 1KO8 6PG 6.85714
337 1G41 ADP 6.98198
338 3UIE ANP 7
339 3BFV ADP 7.01107
340 4BAS GNP 7.03518
341 4PFO ADP 7.04846
342 4ZG4 VO4 ADP 7.04846
343 2VB6 ADP BEF 7.04846
344 1EK0 GNP 7.05882
345 3T1O GDP 7.07071
346 1OXV ANP 7.08215
347 5TIV A3P 7.11462
348 3GJ7 GDP 7.14286
349 6B8B ADP 7.22892
350 3T12 GDP ALF 7.35294
351 1M2O GNP 7.36842
352 4BQS K2Q 7.38636
353 4BQS ADP 7.38636
354 3CX8 GSP 7.38916
355 6G14 G4P 7.48299
356 1G3Q ADP 7.59494
357 4QM7 GTP 7.60234
358 5GVR LMR 7.69231
359 2UZI GTP 7.69231
360 2V2V V12 7.74908
361 3IIJ ADP 7.77778
362 4HDO GNP 7.78443
363 1PUJ GNP 7.80142
364 2CJW GDP 7.8125
365 1S3G AP5 7.8341
366 3W5J GDP 7.84314
367 1XX6 ADP 7.8534
368 4DID GDP 7.89474
369 6AIC AMP 7.94393
370 5IRC GDP 7.9602
371 2WJG GDP 7.97872
372 1YRB GDP 8.01527
373 1M7G AV2 8.05687
374 1M7G ADX 8.05687
375 1M7G ADP 8.05687
376 2GKS ADP 8.14978
377 4AG5 ADP 8.16327
378 2WOJ ADP ALF 8.19209
379 4XTR ATP 8.19209
380 3ZS9 ADP ALF 8.19209
381 4XTR ADP 8.19209
382 4XVU ATP 8.19209
383 1Z0J GTP 8.23529
384 2RGX AP5 8.25243
385 1YVD GNP 8.28402
386 1I4D GDP 8.33333
387 1E96 GTP 8.33333
388 1R6B ADP 8.37004
389 1AQU A3P 8.41751
390 1D2N ANP 8.45588
391 5OCG GNP 8.46561
392 3VX3 ADP 8.46774
393 1F6B GDP 8.58586
394 2CE7 ADP 8.59031
395 5TB5 GDP 8.64865
396 5TAR GDP 8.64865
397 2OFW ADX 8.65385
398 1SVI GDP 8.71795
399 2Q2Y ADP 8.71935
400 2Q2Y MKR 8.71935
401 4ZNL BEF ADP 8.75912
402 1GWN GTP 8.78049
403 4LJ9 ACP 8.84956
404 2W2X GSP 8.87097
405 1DS6 GDP 8.88889
406 1CS4 GSP 8.88889
407 4P4T GDP 8.88889
408 4WOP CTP 8.88889
409 3M1I GTP 8.90052
410 1F9V ADP 8.93372
411 4WZ6 ATP 8.96552
412 1B7T ADP 8.97436
413 2WJH GDP 9.03614
414 2WJH FLC 9.03614
415 1KK8 BEF ADP 9.09091
416 3WXM GTP 9.17226
417 2D2F ADP 9.2
418 6FA4 GNP 9.24856
419 4NE2 ADP 9.28144
420 4NE2 SH2 9.28144
421 2C5L GTP 9.40171
422 5Z2M GTP 9.42029
423 4CVN ADP 9.42408
424 2QEN ADP 9.42857
425 4HI0 GDP 9.44882
426 3Q85 GNP 9.46746
427 6C90 ADP 9.61539
428 4FCW ADP 9.6463
429 2BME GNP 9.67742
430 1G6H ADP 9.72763
431 1M7B GTP 9.78261
432 4HSE ADP 9.82368
433 1GOJ ADP 9.85915
434 2FJU GSP 9.91189
435 5KUT GDP 10.0529
436 2PEZ DAT 10.0559
437 2PEZ GGZ 10.0559
438 1SQ5 ADP 10.0649
439 4K81 GTP 10.0775
440 2A9K GDP 10.1604
441 3B5J 12D 10.2881
442 4UXH T5A 10.3261
443 4U00 ADP 10.6557
444 2X7I CIT 10.7143
445 1S8F GDP 10.7345
446 1ZC3 GNP 10.8571
447 2QQ0 ADP 10.8696
448 2QQ0 TMP 10.8696
449 2QQ0 ANP 10.8696
450 2QQ0 THM 10.8696
451 3H4S ADP 11.1111
452 1LVG ADP 11.1111
453 1Z08 GNP 11.1765
454 4YMU ATP 11.25
455 1U8Z GDP 11.3095
456 3QBT GNP 11.4286
457 1KK1 GNP 11.4634
458 3CH5 GDP 11.5385
459 5E5U MLI 11.5578
460 5ZB0 TYD 11.6162
461 5ZB0 ADP 11.6162
462 2BCG GDP 11.6505
463 2FFQ GSP 11.6959
464 1B0U ATP 11.8321
465 3REF GDP 11.8557
466 5UWH GNP 11.8881
467 5DIF GNP 11.8881
468 5UWW GNP 11.8881
469 5UWS GNP 11.8881
470 5UWP GNP 11.8881
471 6CIT GNP 11.8881
472 5UWI GNP 11.8881
473 5UWT GNP 11.8881
474 5UWU GNP 11.8881
475 5UWQ GNP 11.8881
476 5DHF GNP 11.8881
477 5UWJ GNP 11.8881
478 5UWR GNP 11.8881
479 5DI9 GNP 11.8881
480 1ZUI SKM 11.9048
481 2A5J GDP 12.0419
482 4HAT GNP 12.1429
483 4C4P GNP 12.1495
484 2C9O ADP 12.3348
485 1YZQ GNP 12.3529
486 3ZIA ADP 12.6984
487 3ZIA ATP 12.6984
488 1Z83 AP5 12.7551
489 4PTN GXV 12.828
490 2QN6 GDP 12.9032
491 1Z0K GTP 13.0435
492 5O74 GDP 13.3333
493 2C78 GNP 13.3333
494 2C77 GNP 13.3333
495 1UPT GTP 13.4503
496 3AB4 THR 13.4831
497 1YZN GNP 13.5135
498 3BC1 GNP 13.5593
499 1G7S GDP 13.6564
500 1R4A GNP 13.9394
501 3QF7 ANP 14
502 2QZ4 ADP 14.1221
503 1OFH ADP 14.5161
504 3HU3 AGS 14.5374
505 4M52 M52 14.5923
506 3GJ5 GDP 14.7059
507 3GJ3 GDP 15.1515
508 1IN4 ADP 15.2695
509 3NHB ADP 15.3595
510 1KY3 GDP 15.3846
511 3ZQ6 ADP ALF 16.0494
512 2ZEJ GDP 16.3043
513 2FH5 GTP 16.3551
514 5I34 GDP 16.5533
515 1G7C 5GP 17.0213
516 4V0K GDP 17.1598
517 4D81 ADP 17.6678
518 2ODE ALF GDP 17.7305
519 2CK3 ANP 17.8082
520 2V7Q ADP 17.8082
521 2V7Q ATP 17.8082
522 2CK3 ADP 17.8082
523 3KTA AP5 17.9191
524 3GUZ PAF 18.1818
525 1Z0A GDP 18.3908
526 1ZJ6 G3D 19.2513
527 4R2I ANP 19.5238
528 1MR3 G3D 19.8895
529 2BEK ATP 20.2335
530 1W7J ADP BEF 20.5298
531 6CRK GDP 21.1268
532 1GP2 GDP 21.1268
533 4M9Q GNP 22.467
534 5KDO GDP 24.3243
535 1GOT GDP 24.6575
536 1CXZ GSP 25.5814
537 1J2J GTP 25.9036
538 1O3Y GTP 25.9036
539 2KIN ADP 26.0504
540 1FZQ GDP 26.5193
541 1RE0 GDP 26.8293
542 1S9D GDP 26.8293
543 2A5F GTP 27.4286
544 1QHH ATP 28.1437
545 5WLB GNP 29.4118
546 5UWO GNP 30
547 2HCJ GDP 32.4324
548 1HE1 GDP 37.037
549 1KSH GDP 37.0968
550 5YT0 GDP 42.8571
551 2CHG ANP 42.9204
552 4QOS ADP 49.8113
553 5YV5 ADP 50
Pocket No.: 2; Query (leader) PDB : 5M7P; Ligand: ADP; Similar sites found with APoc: 22
This union binding pocket(no: 2) in the query (biounit: 5m7p.bio1) has 21 residues
No: Leader PDB Ligand Sequence Similarity
1 1IZC PYR 2.35988
2 3HWW AKG 2.64317
3 3CV2 OXL 2.86344
4 4DBH OXL 3.125
5 2BO4 FLC 3.27456
6 1NXJ TLA 3.27869
7 2V5K OXM 3.83275
8 1DL7 NCH 4.58716
9 1VBH PEP 5.06608
10 4UP4 GAL NAG 5.23691
11 1U3G ADP 5.29101
12 3KVY R2B 5.50162
13 1ONI BEZ 5.7971
14 2JAQ DCP 5.85366
15 2ZE7 DST 7.11462
16 2ZE7 AMP 7.11462
17 5LLB 6YZ 7.60456
18 4L9Z OXL 9.43953
19 2F7A BEZ 9.91379
20 3KPE TM3 10.2564
21 4L80 OXL 11.7816
22 4OGQ 7PH 15
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