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Receptor
PDB id Resolution Class Description Source Keywords
5JFL 2.3 Å EC: 1.-.-.- CRYSTAL STRUCTURE OF RHODOPSEUDOMONAS PALUSTRIS PROPIONALDEH DEHYDROGENASE WITH BOUND NAD+ RHODOPSEUDOMONAS PALUSTRIS (STRAIN BISORGANISM_TAXID: 316056 ACYLATING ALDEHYDE DEHYDROGENASE PROPIONYLCYSTEINE BACTERIMICROCOMPARTMENTS OXIDOREDUCTASE
Ref.: IN VITRO CHARACTERIZATION AND CONCERTED FUNCTION OF CORE ENZYMES OF A GLYCYL RADICAL ENZYME - ASSOCIATE BACTERIAL MICROCOMPARTMENT. SCI REP V. 7 42757 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAD A:600;
G:600;
D:600;
F:600;
B:600;
H:600;
E:600;
C:600;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
663.425 C21 H27 N7 O14 P2 c1cc(...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5JFL 2.3 Å EC: 1.-.-.- CRYSTAL STRUCTURE OF RHODOPSEUDOMONAS PALUSTRIS PROPIONALDEH DEHYDROGENASE WITH BOUND NAD+ RHODOPSEUDOMONAS PALUSTRIS (STRAIN BISORGANISM_TAXID: 316056 ACYLATING ALDEHYDE DEHYDROGENASE PROPIONYLCYSTEINE BACTERIMICROCOMPARTMENTS OXIDOREDUCTASE
Ref.: IN VITRO CHARACTERIZATION AND CONCERTED FUNCTION OF CORE ENZYMES OF A GLYCYL RADICAL ENZYME - ASSOCIATE BACTERIAL MICROCOMPARTMENT. SCI REP V. 7 42757 2017
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 318 families.
1 5JFL - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 280 families.
1 5JFL - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 187 families.
1 5JFL - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
2 5DBV - COA C21 H36 N7 O16 P3 S CC(C)(CO[P....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAD; Similar ligands found: 230
No: Ligand ECFP6 Tc MDL keys Tc
1 A3D 0.872727 0.986111
2 NHD 0.821429 0.972222
3 NAP 0.811966 0.986111
4 NFD 0.791304 0.946667
5 NXX 0.765766 0.972603
6 DND 0.765766 0.972603
7 AMP NAD 0.74359 0.972222
8 ZID 0.737705 0.986111
9 NAQ 0.729508 0.934211
10 NAE 0.721311 0.959459
11 NA0 0.712 0.972603
12 TAP 0.704 0.921053
13 NDE 0.689922 0.972603
14 NAJ 0.683333 0.972222
15 NDC 0.679389 0.934211
16 NDO 0.674603 0.958904
17 N01 0.656 0.972222
18 CNA 0.642276 0.972603
19 NBP 0.621212 0.922078
20 8ID 0.609756 0.922078
21 A2D 0.576923 0.958333
22 ADP 0.575472 0.931507
23 NGD 0.574803 0.922078
24 BA3 0.566038 0.958333
25 M33 0.564815 0.918919
26 ADP PO3 0.563636 0.957747
27 B4P 0.560748 0.958333
28 AP5 0.560748 0.958333
29 AN2 0.555556 0.918919
30 AT4 0.555556 0.894737
31 GAP 0.553571 0.932432
32 OOB 0.551724 0.972222
33 CA0 0.550459 0.932432
34 9JJ 0.546053 0.898734
35 HEJ 0.545455 0.931507
36 ACP 0.545455 0.906667
37 ATP 0.545455 0.931507
38 DQV 0.544 0.972222
39 ADP ALF 0.54386 0.883117
40 ALF ADP 0.54386 0.883117
41 DAL AMP 0.543103 0.945205
42 APR 0.540541 0.931507
43 AQP 0.540541 0.931507
44 AR6 0.540541 0.931507
45 5FA 0.540541 0.931507
46 ADP VO4 0.53913 0.945205
47 VO4 ADP 0.53913 0.945205
48 AD9 0.535714 0.906667
49 SAP 0.535714 0.883117
50 AGS 0.535714 0.883117
51 WAQ 0.533333 0.896104
52 ABM 0.53271 0.905405
53 DLL 0.529412 0.972222
54 00A 0.529412 0.921053
55 ACQ 0.526316 0.906667
56 NJP 0.526316 0.959459
57 ANP 0.526316 0.906667
58 OAD 0.525 0.932432
59 ADX 0.522523 0.839506
60 5AL 0.521739 0.945205
61 A1R 0.521008 0.871795
62 9SN 0.520325 0.909091
63 A 0.518868 0.930556
64 AMP 0.518868 0.930556
65 50T 0.517857 0.893333
66 ATF 0.517241 0.894737
67 1ZZ 0.516393 0.851852
68 3OD 0.516393 0.932432
69 SON 0.513514 0.92
70 PRX 0.513274 0.881579
71 6YZ 0.512821 0.906667
72 SRP 0.512821 0.92
73 9X8 0.512397 0.883117
74 ADP BMA 0.512397 0.932432
75 3UK 0.512397 0.958904
76 MYR AMP 0.512195 0.851852
77 NAJ PZO 0.510949 0.909091
78 NMN 0.509434 0.875
79 A3R 0.508333 0.871795
80 B5V 0.508197 0.945946
81 AMP DBH 0.507937 0.906667
82 A22 0.504202 0.945205
83 ATP A A A 0.504 0.971831
84 B5M 0.504 0.933333
85 FA5 0.504 0.945946
86 8QN 0.5 0.945205
87 NAX 0.496183 0.886076
88 TYR AMP 0.496063 0.933333
89 PR8 0.495935 0.8625
90 AMO 0.495868 0.92
91 ADQ 0.495868 0.932432
92 4AD 0.495868 0.933333
93 PAJ 0.495868 0.873418
94 A12 0.495495 0.894737
95 AP2 0.495495 0.894737
96 AHZ 0.492308 0.851852
97 YAP 0.492063 0.933333
98 FYA 0.491935 0.918919
99 AHX 0.491803 0.884615
100 4UU 0.488372 0.933333
101 5SV 0.487603 0.8375
102 TAT 0.487179 0.894737
103 T99 0.487179 0.894737
104 APC 0.486957 0.894737
105 SRA 0.486239 0.881579
106 6V0 0.484848 0.909091
107 NAI 0.484848 0.921053
108 GTA 0.484615 0.898734
109 A A 0.483871 0.958333
110 LAD 0.483871 0.873418
111 AU1 0.482456 0.906667
112 F2R 0.481752 0.831325
113 OMR 0.481203 0.841463
114 TXE 0.481203 0.921053
115 AF3 ADP 3PG 0.481203 0.873418
116 LAQ 0.480916 0.851852
117 G3A 0.48062 0.909091
118 B5Y 0.480315 0.933333
119 NB8 0.48 0.884615
120 TXA 0.48 0.92
121 BIS 0.48 0.871795
122 ME8 0.48 0.851852
123 PTJ 0.48 0.884615
124 139 0.477941 0.886076
125 LPA AMP 0.477273 0.851852
126 AFH 0.476923 0.873418
127 AR6 AR6 0.476923 0.958333
128 G5P 0.476923 0.909091
129 ARG AMP 0.476923 0.841463
130 25L 0.47619 0.945205
131 NAJ PYZ 0.475524 0.864198
132 25A 0.47541 0.958333
133 9ZA 0.47541 0.896104
134 9ZD 0.47541 0.896104
135 DZD 0.47482 0.897436
136 TXD 0.473684 0.921053
137 4UV 0.472868 0.933333
138 TYM 0.470149 0.945946
139 RBY 0.470085 0.894737
140 ADV 0.470085 0.894737
141 4TA 0.467626 0.864198
142 48N 0.466165 0.884615
143 XAH 0.465116 0.851852
144 4UW 0.462687 0.897436
145 M24 0.461538 0.886076
146 80F 0.460993 0.853659
147 IOT 0.459854 0.821429
148 T5A 0.456522 0.853659
149 EAD 0.455782 0.886076
150 MAP 0.455285 0.883117
151 GA7 0.454545 0.894737
152 BT5 0.453901 0.821429
153 A4P 0.452555 0.833333
154 UP5 0.451852 0.933333
155 PAP 0.445378 0.917808
156 4TC 0.445255 0.909091
157 AP0 0.445255 0.884615
158 YLP 0.444444 0.831325
159 P1H 0.443709 0.864198
160 AOC 0.442478 0.810811
161 Z5A 0.439189 0.833333
162 LMS 0.4375 0.817073
163 2A5 0.436975 0.857143
164 A G 0.43662 0.921053
165 G A A A 0.43662 0.909091
166 COD 0.43662 0.802326
167 ADJ 0.435714 0.841463
168 YLB 0.434783 0.831325
169 YLC 0.434783 0.851852
170 U A G G 0.433566 0.921053
171 ATR 0.433333 0.90411
172 7MD 0.432836 0.851852
173 8X1 0.432 0.764045
174 G5A 0.429752 0.790698
175 PO4 PO4 A A A A PO4 0.429688 0.943662
176 TAD 0.42963 0.873418
177 5AS 0.42735 0.770115
178 BTX 0.426573 0.831325
179 YLA 0.425532 0.831325
180 DSZ 0.425197 0.790698
181 NCN 0.424779 0.805556
182 UPA 0.42446 0.921053
183 8PZ 0.424242 0.811765
184 VMS 0.424 0.8
185 54H 0.424 0.8
186 9K8 0.423077 0.744444
187 N0B 0.422819 0.853659
188 6AD 0.422764 0.85
189 AYB 0.422535 0.821429
190 7D3 0.422414 0.844156
191 YLY 0.421769 0.821429
192 TSB 0.420635 0.809524
193 ODP 0.41958 0.922078
194 AV2 0.419355 0.855263
195 FB0 0.419355 0.775281
196 A5A 0.419355 0.819277
197 NNR 0.419048 0.739726
198 A A A 0.418605 0.918919
199 U A 0.417808 0.946667
200 649 0.417266 0.775281
201 NMN AMP PO4 0.416667 0.933333
202 SSA 0.416 0.790698
203 P5A 0.415385 0.755556
204 LSS 0.414062 0.772727
205 A2R 0.412698 0.918919
206 52H 0.412698 0.790698
207 JB6 0.412214 0.896104
208 5N5 0.411215 0.783784
209 YSA 0.410448 0.811765
210 53H 0.409449 0.790698
211 5CA 0.409449 0.790698
212 ITT 0.408333 0.878378
213 7D4 0.408333 0.844156
214 NA7 0.407692 0.894737
215 LEU LMS 0.407692 0.784091
216 5CD 0.407407 0.794521
217 0WD 0.406897 0.909091
218 A3P 0.40678 0.930556
219 HFD 0.406504 0.883117
220 AVV 0.40625 0.860759
221 RAB 0.40566 0.808219
222 XYA 0.40566 0.808219
223 ADN 0.40566 0.808219
224 FDA 0.405063 0.823529
225 GSU 0.40458 0.790698
226 7MC 0.404255 0.831325
227 NSS 0.403101 0.811765
228 6FA 0.402516 0.853659
229 PPS 0.4 0.817073
230 NVA LMS 0.4 0.784091
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5JFL; Ligand: NAD; Similar sites found with APoc: 136
This union binding pocket(no: 1) in the query (biounit: 5jfl.bio2) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 4WG0 CHD None
2 1Q8A HCS 1.14504
3 5G48 1FL 1.3369
4 4WCX MET 1.45833
5 6F5W KG1 1.62602
6 2J6U DGT 1.67598
7 5FPN KYD 1.71756
8 5LTJ ADP 1.71756
9 5OSW DIU 1.9084
10 2Z4T C5P 1.94553
11 3R4S SIA 2.0316
12 1TV5 ORO 2.0316
13 1KAE NAD 2.30415
14 2Z48 NGA 2.31481
15 2Z49 AMG 2.31481
16 4GNC ASO 2.34114
17 1RJW ETF 2.35988
18 2Y5D NAP 2.48092
19 2VAR AMP 2.55591
20 5KJW 53C 2.57611
21 4B4Q A2G GAL NAG FUC GAL GLC 2.64901
22 5IM3 DTP 2.67176
23 3GD8 GOL 2.69058
24 1P4V GLY 2.71186
25 6CB2 OLC 2.73038
26 4MGA 27L 2.7451
27 1JAY F42 2.83019
28 5KF6 NAD 2.8626
29 4RF7 ARG 2.8626
30 3JU6 ANP 2.97297
31 6GH9 MIX 3.0137
32 5OFW 9TW 3.13901
33 4R84 CSF 3.18091
34 2Y7P SAL 3.21101
35 2BHZ MAL 3.24427
36 4WOE ADP 3.43511
37 2ZWI C5P 3.48525
38 2P3V SRT 3.51562
39 5N53 8NB 3.58974
40 4JBL MET 3.62595
41 4JJF N2I 3.77907
42 5UI2 SUC 3.78549
43 5FUI APY 3.78788
44 1FDJ 13P 3.85675
45 3DOO SKM 3.97112
46 1Q19 SSC 3.97614
47 3UDG TMP 3.98671
48 2X1L ADN 4.00763
49 2FR6 URI 4.10959
50 3UYW TAU 4.20561
51 1MT1 AG2 4.42478
52 1RZM E4P 4.43787
53 6FK3 PPI 4.58015
54 4MRP GSH 4.58015
55 3BOF HCS 4.58015
56 5CIC 51R 4.62963
57 3KP6 SAL 4.63576
58 1XX6 ADP 4.71204
59 5C1M OLC 4.8
60 1PDZ PGA 4.83871
61 1LVW TYD 5.08475
62 1UYY BGC BGC 5.34351
63 2YK7 CSF 5.52147
64 3QSB 743 5.7377
65 1XZ3 ICF 5.74713
66 6FA4 D1W 5.78035
67 2RCA GLY 5.82192
68 4USI AKG 5.84416
69 1EZ0 NAP 6.07843
70 1C1X HFA 6.19718
71 5KBF CMP 6.31229
72 5CPR 539 6.34328
73 2CJU PHX 7.07965
74 1KSK URA 7.26496
75 3TY3 GGG 7.37705
76 3W5N RAM 7.63359
77 3NZ1 3NY 7.66284
78 3O01 DXC 8.11688
79 6GNO XDI 8.14815
80 1DL7 NCH 8.25688
81 2XG5 EC2 8.67052
82 2XG5 EC5 8.67052
83 2VT3 ATP 8.83721
84 1N13 AG2 8.84956
85 4XFR CIT 8.8993
86 1I7M CG 8.95522
87 4JLS 3ZE 9.21053
88 1NU4 MLA 9.27835
89 5OLK DTP 9.30233
90 2QQC AG2 9.43396
91 3H0L ADP 9.57447
92 4NS3 NAD 9.73282
93 1JJ7 ADP 10
94 2CUN 3PG 10.7317
95 4HZ0 1AV 10.7981
96 2UZH IPE 10.9091
97 1NXJ TLA 10.929
98 5TVF CGQ 11.7647
99 2DC1 CIT 11.8644
100 4ZO3 C6L 12.2449
101 3OID TCL 12.4031
102 4OE4 NAD 12.5954
103 2WME NAP 12.6531
104 2WOX NDP 12.6789
105 5MWE TCE 12.8571
106 1S14 NOV 12.8866
107 5F7Y GLC GAL NAG GAL FUC A2G 13.3333
108 5X5U NAD 13.6634
109 4LH0 GLV 14.5038
110 1UO5 PIH 14.7059
111 3EFV NAD 15.1515
112 4ZUL UN1 15.3996
113 2Y69 CHD 16.25
114 5OF1 SAL 20.9524
115 3HAZ NAD 21.1832
116 5L13 6ZE 21.6634
117 2BJK NAD 21.7054
118 3RHJ NAP 21.7557
119 1O9J NAD 21.9561
120 6B5G NAD 22.7181
121 6B5G CQY 22.7181
122 5Z84 CHD 23.2143
123 4I8P NAD 25
124 5UCD NAP 25.7634
125 3IWD M2T 25.8065
126 4A0M NAD 26.2097
127 3IWJ NAD 27.833
128 5L2M 6ZY 29.0076
129 4I3V NAD 29.3033
130 1KY8 NAP 29.3413
131 4PZ2 NAD 29.3893
132 2QE0 NAP 30.1527
133 1T90 NAD 31.1069
134 3JZ4 NAP 31.1069
135 3IWK NAD 33.7786
136 2IMP NAI 34.1603
Pocket No.: 2; Query (leader) PDB : 5JFL; Ligand: NAD; Similar sites found with APoc: 53
This union binding pocket(no: 2) in the query (biounit: 5jfl.bio2) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 5A1S FLC 1.11607
2 3VSV XYS 1.33588
3 1OHE ACE ALA SEP PRO 1.43678
4 1G51 AMP 1.9084
5 2F5X ASP 1.92308
6 5T52 NGA 2.06612
7 5T52 A2G 2.06612
8 2Y65 ADP 2.19178
9 4NTO 1PW 2.41546
10 3AQT RCO 2.44898
11 4YJ1 ADP 2.48092
12 3QPB URA 2.67176
13 1GPM CIT 2.67176
14 1OFL NGK GCD 2.7027
15 3WCS MAN NAG GAL 2.75591
16 3AJ6 NGA 2.7972
17 5KXQ GDP 2.82486
18 4YRI 4JH 3.07018
19 4TYT S3C 3.0837
20 2WR9 MAN MAN 3.125
21 1LSH PLD 3.1348
22 1M7G AV2 3.31754
23 3IB1 IMN 3.47826
24 4URG C2E 3.59281
25 4B4U NAP 3.63036
26 1GXS BEZ 3.7037
27 2EV9 SKM 3.81679
28 5C9P FUC 3.93701
29 5TQZ GLC 4
30 1C3M MAN MAN 4.08163
31 5XQL C2E 4.12371
32 1WD4 AHR 4.14938
33 1PVS 7HP 4.25532
34 5AOG IAC 4.56026
35 5KY9 GDP 5
36 2P0D I3P 5.42636
37 5NC1 NAG 5.90717
38 3B6C SDN 5.98291
39 1BW9 PPY 6.17978
40 4R2M ANP 6.32911
41 4LO6 SIA GAL 7.36842
42 5KY5 GDP 7.5
43 1XKV ATP 7.63359
44 154L NAG NAG NAG 8.10811
45 5BWD FUM 8.33333
46 1F9V ADP 8.35735
47 5E5U MLT 8.58779
48 4D52 GXL 9.52381
49 1P0Z FLC 9.92366
50 4GLW NMN 10.8197
51 4G05 JZ3 13.5647
52 5KY4 GDP 20
53 4F8L AES 22.069
Pocket No.: 3; Query (leader) PDB : 5JFL; Ligand: NAD; Similar sites found with APoc: 26
This union binding pocket(no: 3) in the query (biounit: 5jfl.bio2) has 30 residues
No: Leader PDB Ligand Sequence Similarity
1 5E58 CPZ 1.62272
2 3M89 GSP 1.87354
3 5XDT GDP 2.27273
4 3WCS MAN NAG 2.75591
5 5W8X UDP 2.87958
6 2CIX CEJ 3.01003
7 2H7C SIA 3.24427
8 1ZED PNP 3.30579
9 4TVD BGC 3.43511
10 1HSR BHO 4.06977
11 5NM7 GLY 4.13534
12 1G5N UAP SGN IDS SGN 4.40252
13 4R8L ASP 4.41558
14 4ZVC BEZ 4.7619
15 5L2R MLA 5.13245
16 1KZL CRM 5.28846
17 5OCG 9R5 5.29101
18 4RDN 6MD 5.38922
19 1WLJ U5P 5.82011
20 2D3Y DU 5.93607
21 1BZL FAD 6.17284
22 1BW9 NAD 6.17978
23 4F97 GDP 6.23742
24 1NME 159 8.90411
25 4P8O 883 12.2995
26 4OGQ 7PH 16.2162
Pocket No.: 4; Query (leader) PDB : 5JFL; Ligand: NAD; Similar sites found with APoc: 36
This union binding pocket(no: 4) in the query (biounit: 5jfl.bio2) has 30 residues
No: Leader PDB Ligand Sequence Similarity
1 6EGU 43Y 1.88324
2 2X1E X1E 1.96078
3 6AM8 TRP 2.27273
4 4XH0 ADP 2.48139
5 2VL1 GLY GLY 2.95359
6 2HXW FLC 2.95359
7 1F20 NAP 2.98851
8 6DWI HD4 3.00429
9 3ODU ITD 3.38645
10 5XHA FRU 3.43511
11 2WGV CIT 3.62903
12 4CCW VKC 3.67893
13 3COB ADP 3.79404
14 2QS8 MET 3.82775
15 2RC8 DSN 4.08163
16 1B4B ARG 4.22535
17 4LHD GLY 4.58015
18 3PUN FUC GAL NDG FUC 5.06329
19 5DNC ASN 5.10204
20 3IP8 B85 5.24194
21 5K8S CMP 5.40541
22 4XDA RIB 5.82524
23 5YSQ INS 6.29371
24 4NTM 2K8 6.61157
25 4KCT PYR 6.61323
26 5D4V SAH 6.71642
27 6BSW UDP 6.80473
28 3RMK BML 8.43373
29 1MID LAP 9.89011
30 5LOL GSH 10.2326
31 4YDS ATP 10.9649
32 1OFU GDP 11.5625
33 1TE2 PGA 11.9469
34 1VBO MAN 16.1074
35 5ZCO CHD 23.2143
36 2VUT NAD 25.5814
Pocket No.: 5; Query (leader) PDB : 5JFL; Ligand: NAD; Similar sites found with APoc: 8
This union binding pocket(no: 5) in the query (biounit: 5jfl.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
1 4KRG OPE 2.14592
2 1JT1 MCO 2.28137
3 2ZE3 AKG 2.90909
4 6GR0 F8W 4.5977
5 4L8F MTX 4.80769
6 3UB7 ACM 5.52486
7 5F90 GLA GAL 5.76923
8 5D4V YGP 6.71642
Pocket No.: 6; Query (leader) PDB : 5JFL; Ligand: NAD; Similar sites found with APoc: 20
This union binding pocket(no: 6) in the query (biounit: 5jfl.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 5WAN URA 1.73697
2 2HK9 SKM 1.81818
3 2AF6 BRU 3.10078
4 4GYI ADP 3.24427
5 4DD8 BAT 3.84615
6 4J51 N75 4.60123
7 4XCP PLM 5.29412
8 5F90 GLA GAL BGC 5VQ 5.76923
9 3NNF AKG 6.10465
10 6HKE MLT 6.28931
11 3THR C2F 6.48464
12 3O03 GCO 6.87285
13 1EI6 PPF 7.88177
14 1RL4 BL5 8.51064
15 3DZ6 M8E 8.95522
16 1ONI BEZ 13.0435
17 4E03 ADP 13.1068
18 2E1A MSE 13.3333
19 3CF6 SP1 13.7725
20 6CS9 PIO 14.6341
Pocket No.: 7; Query (leader) PDB : 5JFL; Ligand: NAD; Similar sites found with APoc: 12
This union binding pocket(no: 7) in the query (biounit: 5jfl.bio1) has 30 residues
No: Leader PDB Ligand Sequence Similarity
1 3FS1 ALA ALA LEU ALA ALA LEU LEU ALA ALA 2.17391
2 5KOD IAC 2.48092
3 5LX9 OLB 3.16901
4 5JWC 4W0 3.64683
5 1I9Z 2IP 3.81679
6 2G30 ALA ALA PHE 4.26357
7 3LRE ADP 4.77099
8 2WQ4 SFU 5.12821
9 2DVZ GLU 7.00637
10 1LFO OLA 7.03125
11 1UPR 4IP 8.13008
12 4O4Z N2O 22.0779
Pocket No.: 8; Query (leader) PDB : 5JFL; Ligand: NAD; Similar sites found with APoc: 18
This union binding pocket(no: 8) in the query (biounit: 5jfl.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 6B79 ORA None
2 5WXU FLC 1.46138
3 3LJU IP9 1.81347
4 5MB4 NAG 1.99501
5 5O4J SAH 2.55474
6 1POT SPD 2.76923
7 1O5Q PYR 2.95082
8 1IG0 VIB 3.1348
9 6C74 PC 3.6036
10 2FR6 CTN 4.10959
11 3QDW A2G 4.8951
12 5IFK HPA 6.73077
13 1S4P GDP 8.90805
14 2OFE NAG 11.2676
15 4Z2S NAG 11.2676
16 4Z2S NDG 11.2676
17 5HV7 RBL 13.9908
18 4F4S EFO 15.7895
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