Receptor
PDB id Resolution Class Description Source Keywords
5J6Y 1.03 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF PA14 DOMAIN OF MPAFP ANTIFREEZE PROTEIN MARINOMONAS PRIMORYENSIS CELL ADHESION SUGAR BINDING ANTIFREEZE PROTEIN PA14
Ref.: STRUCTURE OF A 1.5-MDA ADHESIN THAT BINDS ITS ANTAR BACTERIUM TO DIATOMS AND ICE. SCI ADV V. 3 01440 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CA A:301;
A:305;
A:306;
A:308;
A:304;
A:307;
A:303;
A:302;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Invalid;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
40.078 Ca [Ca+2...
GLC A:309;
Valid;
none;
submit data
180.156 C6 H12 O6 C([C@...
BGC A:310;
Valid;
none;
submit data
180.156 C6 H12 O6 C([C@...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5J6Y 1.03 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF PA14 DOMAIN OF MPAFP ANTIFREEZE PROTEIN MARINOMONAS PRIMORYENSIS CELL ADHESION SUGAR BINDING ANTIFREEZE PROTEIN PA14
Ref.: STRUCTURE OF A 1.5-MDA ADHESIN THAT BINDS ITS ANTAR BACTERIUM TO DIATOMS AND ICE. SCI ADV V. 3 01440 2017
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 5J6Y - GLC C6 H12 O6 C([C@@H]1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 5J6Y - GLC C6 H12 O6 C([C@@H]1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 5J6Y - GLC C6 H12 O6 C([C@@H]1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GLC; Similar ligands found: 141
No: Ligand ECFP6 Tc MDL keys Tc
1 GAL 1 1
2 BMA 1 1
3 GXL 1 1
4 GLA 1 1
5 ALL 1 1
6 GLC 1 1
7 BGC 1 1
8 GIV 1 1
9 MAN 1 1
10 WOO 1 1
11 32O 0.653846 0.866667
12 RIB 0.653846 0.866667
13 FUB 0.653846 0.866667
14 Z6J 0.653846 0.866667
15 AHR 0.653846 0.866667
16 BMA BMA MAN 0.545455 0.823529
17 GLA BGC 0.511628 0.848485
18 LAK 0.511628 0.848485
19 BGC GLA 0.511628 0.848485
20 GLA BMA 0.511628 0.848485
21 MAN BMA 0.511628 0.848485
22 GLA GLC 0.511628 0.848485
23 GAL GAL 0.511628 0.848485
24 MLB 0.511628 0.848485
25 BMA GLA 0.511628 0.848485
26 BMA BMA BMA BMA BMA BMA MAN 0.5 0.823529
27 YDR 0.5 0.8
28 MAN BMA BMA BMA BMA BMA 0.5 0.823529
29 GLC GLC GLC GLC BGC 0.488889 0.848485
30 GLC GLC GLC 0.488889 0.848485
31 MAN MAN MAN 0.488889 0.848485
32 GLC GLC GLC GLC GLC BGC 0.488889 0.848485
33 BGP 0.461538 0.675
34 G6P 0.461538 0.675
35 M6P 0.461538 0.675
36 A6P 0.461538 0.675
37 M6D 0.461538 0.675
38 BG6 0.461538 0.675
39 SHG 0.457143 0.875
40 GAF 0.457143 0.875
41 G2F 0.457143 0.875
42 X6X 0.457143 0.777778
43 2FG 0.457143 0.875
44 G3F 0.457143 0.875
45 PA1 0.457143 0.777778
46 1GN 0.457143 0.777778
47 GCS 0.457143 0.777778
48 2H5 0.457143 0.875
49 LB2 0.454545 0.848485
50 BGC BMA 0.454545 0.848485
51 BGC GAL 0.454545 0.848485
52 MAL 0.454545 0.848485
53 GLC GAL 0.454545 0.848485
54 M3M 0.454545 0.848485
55 GLA GAL 0.454545 0.848485
56 MAB 0.454545 0.848485
57 GLC BGC 0.454545 0.848485
58 BMA BMA 0.454545 0.848485
59 LBT 0.454545 0.848485
60 MAL MAL 0.454545 0.823529
61 CBK 0.454545 0.848485
62 GLA GLA 0.454545 0.848485
63 MAN GLC 0.454545 0.848485
64 CBI 0.454545 0.848485
65 N9S 0.454545 0.848485
66 GAL GLC 0.454545 0.848485
67 BMA GAL 0.454545 0.848485
68 B2G 0.454545 0.848485
69 BGC GLC 0.454545 0.848485
70 LAT 0.454545 0.848485
71 GAL BGC 0.454545 0.848485
72 3MG 0.444444 0.875
73 TCB 0.444444 0.8
74 GLC SGC 0.444444 0.8
75 YIO 0.441176 0.870968
76 2GS 0.432432 0.875
77 BGC BGC 0.431818 0.848485
78 2M4 0.431818 0.848485
79 MAN MAN 0.431818 0.848485
80 AHR AHR 0.428571 0.764706
81 GLF 0.428571 0.84375
82 FUB AHR 0.428571 0.764706
83 CT3 0.416667 0.848485
84 GLC BGC GLC 0.416667 0.848485
85 MLR 0.416667 0.848485
86 GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
87 GLC GLC GLC GLC GLC 0.416667 0.848485
88 GAL FUC 0.416667 0.848485
89 BMA BMA BMA 0.416667 0.848485
90 CTR 0.416667 0.848485
91 BGC GLC GLC 0.416667 0.848485
92 BGC GLC GLC GLC GLC 0.416667 0.848485
93 MAN MAN BMA BMA BMA BMA 0.416667 0.848485
94 GLC GAL GAL 0.416667 0.848485
95 B4G 0.416667 0.848485
96 CEX 0.416667 0.848485
97 MAN BMA BMA BMA BMA 0.416667 0.848485
98 BMA BMA BMA BMA BMA 0.416667 0.848485
99 GLC BGC BGC BGC BGC BGC 0.416667 0.848485
100 CTT 0.416667 0.848485
101 GLC GLC BGC 0.416667 0.848485
102 DXI 0.416667 0.848485
103 GLC GLC BGC GLC GLC GLC GLC 0.416667 0.848485
104 BGC GLC GLC GLC 0.416667 0.848485
105 BGC BGC BGC GLC 0.416667 0.848485
106 BGC BGC BGC BGC BGC BGC 0.416667 0.848485
107 BMA BMA BMA BMA BMA BMA 0.416667 0.848485
108 MTT 0.416667 0.848485
109 BMA MAN BMA 0.416667 0.848485
110 BGC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
111 CE5 0.416667 0.848485
112 GAL GAL GAL 0.416667 0.848485
113 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.416667 0.848485
114 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
115 GLA GAL GLC 0.416667 0.848485
116 CE6 0.416667 0.848485
117 GLC BGC BGC BGC BGC 0.416667 0.848485
118 GLC BGC BGC 0.416667 0.848485
119 MAN BMA BMA 0.416667 0.848485
120 MT7 0.416667 0.848485
121 GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
122 CE8 0.416667 0.848485
123 CEY 0.416667 0.848485
124 BGC BGC BGC 0.408163 0.848485
125 BGC BGC BGC BGC BGC 0.408163 0.848485
126 GLC BGC BGC BGC BGC BGC BGC 0.408163 0.848485
127 SGC SGC BGC 0.408163 0.8
128 GLC BGC BGC BGC 0.408163 0.848485
129 BGC BGC BGC ASO BGC BGC ASO 0.408163 0.848485
130 BGC BGC BGC GLC BGC BGC 0.408163 0.848485
131 TRE 0.405405 0.848485
132 1LL 0.405405 0.771429
133 TDG 0.405405 0.771429
134 BM3 0.404762 0.7
135 NDG 0.404762 0.7
136 NAG 0.404762 0.7
137 HSQ 0.404762 0.7
138 A2G 0.404762 0.7
139 NGA 0.404762 0.7
140 FUB AHR AHR 0.4 0.764706
141 AHR AHR AHR 0.4 0.764706
Ligand no: 2; Ligand: BGC; Similar ligands found: 141
No: Ligand ECFP6 Tc MDL keys Tc
1 GAL 1 1
2 BMA 1 1
3 GXL 1 1
4 GLA 1 1
5 ALL 1 1
6 GLC 1 1
7 BGC 1 1
8 GIV 1 1
9 MAN 1 1
10 WOO 1 1
11 32O 0.653846 0.866667
12 RIB 0.653846 0.866667
13 FUB 0.653846 0.866667
14 Z6J 0.653846 0.866667
15 AHR 0.653846 0.866667
16 BMA BMA MAN 0.545455 0.823529
17 GLA BGC 0.511628 0.848485
18 LAK 0.511628 0.848485
19 BGC GLA 0.511628 0.848485
20 GLA BMA 0.511628 0.848485
21 MAN BMA 0.511628 0.848485
22 GLA GLC 0.511628 0.848485
23 GAL GAL 0.511628 0.848485
24 MLB 0.511628 0.848485
25 BMA GLA 0.511628 0.848485
26 BMA BMA BMA BMA BMA BMA MAN 0.5 0.823529
27 YDR 0.5 0.8
28 MAN BMA BMA BMA BMA BMA 0.5 0.823529
29 GLC GLC GLC GLC BGC 0.488889 0.848485
30 GLC GLC GLC 0.488889 0.848485
31 MAN MAN MAN 0.488889 0.848485
32 GLC GLC GLC GLC GLC BGC 0.488889 0.848485
33 BGP 0.461538 0.675
34 G6P 0.461538 0.675
35 M6P 0.461538 0.675
36 A6P 0.461538 0.675
37 M6D 0.461538 0.675
38 BG6 0.461538 0.675
39 SHG 0.457143 0.875
40 GAF 0.457143 0.875
41 G2F 0.457143 0.875
42 X6X 0.457143 0.777778
43 2FG 0.457143 0.875
44 G3F 0.457143 0.875
45 PA1 0.457143 0.777778
46 1GN 0.457143 0.777778
47 GCS 0.457143 0.777778
48 2H5 0.457143 0.875
49 LB2 0.454545 0.848485
50 BGC BMA 0.454545 0.848485
51 BGC GAL 0.454545 0.848485
52 MAL 0.454545 0.848485
53 GLC GAL 0.454545 0.848485
54 M3M 0.454545 0.848485
55 GLA GAL 0.454545 0.848485
56 MAB 0.454545 0.848485
57 GLC BGC 0.454545 0.848485
58 BMA BMA 0.454545 0.848485
59 LBT 0.454545 0.848485
60 MAL MAL 0.454545 0.823529
61 CBK 0.454545 0.848485
62 GLA GLA 0.454545 0.848485
63 MAN GLC 0.454545 0.848485
64 CBI 0.454545 0.848485
65 N9S 0.454545 0.848485
66 GAL GLC 0.454545 0.848485
67 BMA GAL 0.454545 0.848485
68 B2G 0.454545 0.848485
69 BGC GLC 0.454545 0.848485
70 LAT 0.454545 0.848485
71 GAL BGC 0.454545 0.848485
72 3MG 0.444444 0.875
73 TCB 0.444444 0.8
74 GLC SGC 0.444444 0.8
75 YIO 0.441176 0.870968
76 2GS 0.432432 0.875
77 BGC BGC 0.431818 0.848485
78 2M4 0.431818 0.848485
79 MAN MAN 0.431818 0.848485
80 AHR AHR 0.428571 0.764706
81 GLF 0.428571 0.84375
82 FUB AHR 0.428571 0.764706
83 CT3 0.416667 0.848485
84 GLC BGC GLC 0.416667 0.848485
85 MLR 0.416667 0.848485
86 GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
87 GLC GLC GLC GLC GLC 0.416667 0.848485
88 GAL FUC 0.416667 0.848485
89 BMA BMA BMA 0.416667 0.848485
90 CTR 0.416667 0.848485
91 BGC GLC GLC 0.416667 0.848485
92 BGC GLC GLC GLC GLC 0.416667 0.848485
93 MAN MAN BMA BMA BMA BMA 0.416667 0.848485
94 GLC GAL GAL 0.416667 0.848485
95 B4G 0.416667 0.848485
96 CEX 0.416667 0.848485
97 MAN BMA BMA BMA BMA 0.416667 0.848485
98 BMA BMA BMA BMA BMA 0.416667 0.848485
99 GLC BGC BGC BGC BGC BGC 0.416667 0.848485
100 CTT 0.416667 0.848485
101 GLC GLC BGC 0.416667 0.848485
102 DXI 0.416667 0.848485
103 GLC GLC BGC GLC GLC GLC GLC 0.416667 0.848485
104 BGC GLC GLC GLC 0.416667 0.848485
105 BGC BGC BGC GLC 0.416667 0.848485
106 BGC BGC BGC BGC BGC BGC 0.416667 0.848485
107 BMA BMA BMA BMA BMA BMA 0.416667 0.848485
108 MTT 0.416667 0.848485
109 BMA MAN BMA 0.416667 0.848485
110 BGC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
111 CE5 0.416667 0.848485
112 GAL GAL GAL 0.416667 0.848485
113 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.416667 0.848485
114 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
115 GLA GAL GLC 0.416667 0.848485
116 CE6 0.416667 0.848485
117 GLC BGC BGC BGC BGC 0.416667 0.848485
118 GLC BGC BGC 0.416667 0.848485
119 MAN BMA BMA 0.416667 0.848485
120 MT7 0.416667 0.848485
121 GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
122 CE8 0.416667 0.848485
123 CEY 0.416667 0.848485
124 BGC BGC BGC 0.408163 0.848485
125 BGC BGC BGC BGC BGC 0.408163 0.848485
126 GLC BGC BGC BGC BGC BGC BGC 0.408163 0.848485
127 SGC SGC BGC 0.408163 0.8
128 GLC BGC BGC BGC 0.408163 0.848485
129 BGC BGC BGC ASO BGC BGC ASO 0.408163 0.848485
130 BGC BGC BGC GLC BGC BGC 0.408163 0.848485
131 TRE 0.405405 0.848485
132 1LL 0.405405 0.771429
133 TDG 0.405405 0.771429
134 BM3 0.404762 0.7
135 NDG 0.404762 0.7
136 NAG 0.404762 0.7
137 HSQ 0.404762 0.7
138 A2G 0.404762 0.7
139 NGA 0.404762 0.7
140 FUB AHR AHR 0.4 0.764706
141 AHR AHR AHR 0.4 0.764706
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5J6Y; Ligand: BGC; Similar sites found: 140
This union binding pocket(no: 1) in the query (biounit: 5j6y.bio1) has 10 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3EWR APR 0.001082 0.47857 None
2 3MJH GTP 0.03187 0.40186 None
3 4O33 3PG 0.0456 0.4118 1.06383
4 4O33 TZN 0.0456 0.4118 1.06383
5 2BFR ADP 0.005157 0.43025 1.59574
6 2JAP NDP 0.02485 0.42017 1.59574
7 5JWC FAD 0.01458 0.42978 2.65957
8 1FL2 FAD 0.01479 0.42907 2.65957
9 4WHZ 3NL 0.03109 0.41401 2.65957
10 2RAB FAD 0.01095 0.44323 3.19149
11 2RAB NAD 0.01793 0.44323 3.19149
12 1BH2 GSP 0.02062 0.41558 3.19149
13 2ODE ALF GDP 0.02227 0.4153 3.19149
14 2Z48 A2G 0.005612 0.41246 3.19149
15 5ISY NAD 0.01064 0.40764 3.19149
16 2FB3 5AD 0.01197 0.40649 3.19149
17 2FB3 MET 0.01094 0.40649 3.19149
18 2FB3 GTP 0.02563 0.40649 3.19149
19 1G51 AMO 0.0238 0.40638 3.19149
20 5J60 FAD 0.03093 0.40538 3.19149
21 4ISS TAR 0.008894 0.40451 3.19149
22 1KHZ ADV 0.03581 0.40395 3.19149
23 2Z48 NGA 0.006652 0.40356 3.19149
24 1FK8 NAD 0.03518 0.40165 3.19149
25 3JZ0 APC 0.01618 0.40044 3.19149
26 2FJU GSP 0.02304 0.40524 3.37079
27 2HQM FAD 0.008032 0.44884 3.7234
28 1QM5 PLP 0.01893 0.44577 3.7234
29 1QM5 GLC GLC GLC PO4 SGC GLC 0.01786 0.43996 3.7234
30 1J3I UMP 0.009642 0.41444 3.7234
31 1FEC FAD 0.0352 0.41362 3.7234
32 2JLD AG1 0.03519 0.40575 3.7234
33 1QPB TPP 0.03452 0.40368 3.7234
34 5DXA SFG 0.03151 0.40186 3.7234
35 1RYA GDP 0.00392 0.45501 3.75
36 1LFD GNP 0.01731 0.41893 4.19162
37 2XVE FAD 0.02763 0.43677 4.25532
38 4UP3 FAD 0.01394 0.43258 4.25532
39 1NF3 GNP 0.0134 0.42636 4.25532
40 1GPM CIT 0.01063 0.41143 4.25532
41 4NBT NAD 0.03836 0.4059 4.25532
42 1KQB BEZ 0.03764 0.40533 4.25532
43 5DI9 GNP 0.03171 0.4047 4.25532
44 1KQB FMN 0.04163 0.4034 4.25532
45 5BUK FAD 0.04193 0.40209 4.25532
46 1DL5 SAH 0.04782 0.40074 4.25532
47 1ZC3 GNP 0.0233 0.41191 4.42478
48 2FAV APR 0.00408 0.45135 4.44444
49 4BQS K2Q 0.009736 0.43936 4.54545
50 4BQS ADP 0.009736 0.43936 4.54545
51 1Y0Y L2O VAL VAL ASP 0.001918 0.45775 4.78723
52 4ZA2 NAD 0.01482 0.42831 4.78723
53 3LU1 NAD 0.02837 0.42015 4.78723
54 2JAH NDP 0.02493 0.4185 4.78723
55 1M7G ADX 0.03516 0.41301 4.78723
56 1V5Y 4HC 0.03802 0.40812 4.78723
57 1V5Y FMN 0.04005 0.40812 4.78723
58 1Q3Q ANP 0.03376 0.40699 4.78723
59 2XBL M7P 0.02126 0.40111 4.78723
60 1WLE SRP 0.03 0.40006 4.78723
61 3NKS ACJ 0.02017 0.40287 4.8218
62 3EWP APR 0.007475 0.43173 5.08475
63 3CX8 GSP 0.02045 0.41751 5.31915
64 3FJG 3PG 0.005345 0.41483 5.31915
65 3I9L N1C 0.02872 0.41358 5.31915
66 4CP8 MLI 0.005523 0.41088 5.31915
67 4PU5 ANP 0.03773 0.40052 5.31915
68 2FR6 CTN 0.0376 0.41608 5.47945
69 2FR6 URI 0.04897 0.4101 5.47945
70 4HAT GNP 0.03493 0.40196 5.71429
71 5F90 GLA GAL BGC 5VQ 0.00408 0.42348 5.76923
72 5F90 LMR 0.004081 0.41461 5.76923
73 5F90 GLA GAL 0.005456 0.41335 5.76923
74 1ZMD NAI 0.02008 0.4232 5.85106
75 1ZMD FAD 0.02704 0.4216 5.85106
76 3PVW QRX 0.01597 0.4211 5.85106
77 3KAL ADP 0.0336 0.41534 5.85106
78 4GYS MLI 0.004749 0.41457 5.85106
79 2F6U CIT 0.006023 0.41329 5.85106
80 3RNM FAD 0.0383 0.40875 5.85106
81 5L53 NAP 0.02447 0.40586 5.85106
82 3AKK ADP 0.0287 0.40039 5.85106
83 5CB3 APR 0.009396 0.41482 6.01093
84 3QFA FAD 0.009188 0.4481 6.03448
85 1V3S ATP 0.01969 0.4131 6.03448
86 3AD8 NAD 0.03185 0.40099 6.06061
87 4IQY AR6 0.001854 0.47108 6.38298
88 2XVD AS6 0.01166 0.42065 6.38298
89 1XG5 NAP 0.02112 0.42055 6.38298
90 1AZT GSP 0.02204 0.41742 6.38298
91 5U8U FAD 0.04899 0.41648 6.38298
92 2IVN ANP 0.02001 0.4096 6.38298
93 1GRN AF3 0.01132 0.40402 6.38298
94 3MJE NDP 0.004914 0.45899 6.91489
95 4DYO SD4 0.004654 0.43831 6.91489
96 4B2D FBP 0.006771 0.41973 6.91489
97 2OHH FMN 0.01606 0.41935 6.91489
98 3FG2 FAD 0.02125 0.41851 6.91489
99 1TAD GDP 0.03425 0.40215 6.91489
100 1TAD ALF 0.03425 0.40215 6.91489
101 4QMN DB8 0.03074 0.40079 7.41935
102 4FUA PGH 0.002036 0.45201 7.44681
103 2QV6 GTP 0.01715 0.42474 7.44681
104 1GPE FAD 0.02539 0.42037 7.44681
105 4K39 SAM 0.009372 0.41457 7.44681
106 4K37 SAM 0.009793 0.41197 7.44681
107 3CB2 GDP 0.02486 0.40625 7.44681
108 4M52 FAD 0.04052 0.40119 7.44681
109 4HDO GNP 0.02211 0.41276 7.78443
110 4COV GLA GAL 0.00000742 0.57616 7.86517
111 1IBR GNP 0.02534 0.40525 7.97872
112 3O84 HTJ 0.04284 0.40253 7.97872
113 4O97 NTX 0.03156 0.40051 7.97872
114 2BO4 FLC 0.008637 0.43882 8.51064
115 4OSP NAP 0.03181 0.4099 8.51064
116 1FLM FMN 0.007341 0.43693 9.01639
117 1TX4 ALF GDP 0.01879 0.41255 9.03955
118 3T7S SAM 0.005818 0.44259 9.04255
119 1UPA TPP 0.03467 0.40341 9.04255
120 2IHT TPP 0.03418 0.40321 9.04255
121 3ITJ FAD 0.01751 0.43887 9.57447
122 4I6H 1C8 0.00552 0.42711 9.57447
123 5UAV TFB 0.01963 0.42111 9.57447
124 5UAV NDP 0.01963 0.42111 9.57447
125 2NP9 YE1 0.01177 0.42664 10.1064
126 2I8T GDD 0.004152 0.45357 10.1796
127 2F5Z FAD 0.0299 0.41801 10.9375
128 1UJ5 5RP 0.006903 0.42849 11.1702
129 1ZBQ NAD 0.03422 0.41395 11.1702
130 1SVK ALF GDP 0.02498 0.4133 11.1702
131 3AFN NAP 0.02405 0.42634 11.7021
132 4G74 FAD 0.02035 0.41941 11.7021
133 2WQQ CSF 0.01996 0.40397 12.766
134 5L3S GNP 0.02901 0.40025 12.766
135 4NJH 2K8 0.01928 0.41283 13.2979
136 4NJH SAM 0.01928 0.41283 13.2979
137 2GAG NAD 0.0185 0.41327 13.8298
138 1YP4 ADQ 0.02608 0.40356 20.7447
139 1ICV FMN 0.04159 0.40222 23.4043
140 1S7G APR 0.04062 0.41091 26.0638
Pocket No.: 2; Query (leader) PDB : 5J6Y; Ligand: GLC; Similar sites found: 140
This union binding pocket(no: 2) in the query (biounit: 5j6y.bio1) has 10 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3EWR APR 0.001082 0.47857 None
2 3MJH GTP 0.03187 0.40186 None
3 4O33 3PG 0.0456 0.4118 1.06383
4 4O33 TZN 0.0456 0.4118 1.06383
5 2BFR ADP 0.005157 0.43025 1.59574
6 2JAP NDP 0.02485 0.42017 1.59574
7 5JWC FAD 0.01458 0.42978 2.65957
8 1FL2 FAD 0.01479 0.42907 2.65957
9 4WHZ 3NL 0.03109 0.41401 2.65957
10 2RAB FAD 0.01095 0.44323 3.19149
11 2RAB NAD 0.01793 0.44323 3.19149
12 1BH2 GSP 0.02062 0.41558 3.19149
13 2ODE ALF GDP 0.02227 0.4153 3.19149
14 2Z48 A2G 0.005612 0.41246 3.19149
15 5ISY NAD 0.01064 0.40764 3.19149
16 2FB3 5AD 0.01197 0.40649 3.19149
17 2FB3 MET 0.01094 0.40649 3.19149
18 2FB3 GTP 0.02563 0.40649 3.19149
19 1G51 AMO 0.0238 0.40638 3.19149
20 5J60 FAD 0.03093 0.40538 3.19149
21 4ISS TAR 0.008894 0.40451 3.19149
22 1KHZ ADV 0.03581 0.40395 3.19149
23 2Z48 NGA 0.006652 0.40356 3.19149
24 1FK8 NAD 0.03518 0.40165 3.19149
25 3JZ0 APC 0.01618 0.40044 3.19149
26 2FJU GSP 0.02304 0.40524 3.37079
27 2HQM FAD 0.008032 0.44884 3.7234
28 1QM5 PLP 0.01893 0.44577 3.7234
29 1QM5 GLC GLC GLC PO4 SGC GLC 0.01786 0.43996 3.7234
30 1J3I UMP 0.009642 0.41444 3.7234
31 1FEC FAD 0.0352 0.41362 3.7234
32 2JLD AG1 0.03519 0.40575 3.7234
33 1QPB TPP 0.03452 0.40368 3.7234
34 5DXA SFG 0.03151 0.40186 3.7234
35 1RYA GDP 0.00392 0.45501 3.75
36 1LFD GNP 0.01731 0.41893 4.19162
37 2XVE FAD 0.02763 0.43677 4.25532
38 4UP3 FAD 0.01394 0.43258 4.25532
39 1NF3 GNP 0.0134 0.42636 4.25532
40 1GPM CIT 0.01063 0.41143 4.25532
41 4NBT NAD 0.03836 0.4059 4.25532
42 1KQB BEZ 0.03764 0.40533 4.25532
43 5DI9 GNP 0.03171 0.4047 4.25532
44 1KQB FMN 0.04163 0.4034 4.25532
45 5BUK FAD 0.04193 0.40209 4.25532
46 1DL5 SAH 0.04782 0.40074 4.25532
47 1ZC3 GNP 0.0233 0.41191 4.42478
48 2FAV APR 0.00408 0.45135 4.44444
49 4BQS K2Q 0.009736 0.43936 4.54545
50 4BQS ADP 0.009736 0.43936 4.54545
51 1Y0Y L2O VAL VAL ASP 0.001918 0.45775 4.78723
52 4ZA2 NAD 0.01482 0.42831 4.78723
53 3LU1 NAD 0.02837 0.42015 4.78723
54 2JAH NDP 0.02493 0.4185 4.78723
55 1M7G ADX 0.03516 0.41301 4.78723
56 1V5Y 4HC 0.03802 0.40812 4.78723
57 1V5Y FMN 0.04005 0.40812 4.78723
58 1Q3Q ANP 0.03376 0.40699 4.78723
59 2XBL M7P 0.02126 0.40111 4.78723
60 1WLE SRP 0.03 0.40006 4.78723
61 3NKS ACJ 0.02017 0.40287 4.8218
62 3EWP APR 0.007475 0.43173 5.08475
63 3CX8 GSP 0.02045 0.41751 5.31915
64 3FJG 3PG 0.005345 0.41483 5.31915
65 3I9L N1C 0.02872 0.41358 5.31915
66 4CP8 MLI 0.005523 0.41088 5.31915
67 4PU5 ANP 0.03773 0.40052 5.31915
68 2FR6 CTN 0.0376 0.41608 5.47945
69 2FR6 URI 0.04897 0.4101 5.47945
70 4HAT GNP 0.03493 0.40196 5.71429
71 5F90 GLA GAL BGC 5VQ 0.00408 0.42348 5.76923
72 5F90 LMR 0.004081 0.41461 5.76923
73 5F90 GLA GAL 0.005456 0.41335 5.76923
74 1ZMD NAI 0.02008 0.4232 5.85106
75 1ZMD FAD 0.02704 0.4216 5.85106
76 3PVW QRX 0.01597 0.4211 5.85106
77 3KAL ADP 0.0336 0.41534 5.85106
78 4GYS MLI 0.004749 0.41457 5.85106
79 2F6U CIT 0.006023 0.41329 5.85106
80 3RNM FAD 0.0383 0.40875 5.85106
81 5L53 NAP 0.02447 0.40586 5.85106
82 3AKK ADP 0.0287 0.40039 5.85106
83 5CB3 APR 0.009396 0.41482 6.01093
84 3QFA FAD 0.009188 0.4481 6.03448
85 1V3S ATP 0.01969 0.4131 6.03448
86 3AD8 NAD 0.03185 0.40099 6.06061
87 4IQY AR6 0.001854 0.47108 6.38298
88 2XVD AS6 0.01166 0.42065 6.38298
89 1XG5 NAP 0.02112 0.42055 6.38298
90 1AZT GSP 0.02204 0.41742 6.38298
91 5U8U FAD 0.04899 0.41648 6.38298
92 2IVN ANP 0.02001 0.4096 6.38298
93 1GRN AF3 0.01132 0.40402 6.38298
94 3MJE NDP 0.004914 0.45899 6.91489
95 4DYO SD4 0.004654 0.43831 6.91489
96 4B2D FBP 0.006771 0.41973 6.91489
97 2OHH FMN 0.01606 0.41935 6.91489
98 3FG2 FAD 0.02125 0.41851 6.91489
99 1TAD GDP 0.03425 0.40215 6.91489
100 1TAD ALF 0.03425 0.40215 6.91489
101 4QMN DB8 0.03074 0.40079 7.41935
102 4FUA PGH 0.002036 0.45201 7.44681
103 2QV6 GTP 0.01715 0.42474 7.44681
104 1GPE FAD 0.02539 0.42037 7.44681
105 4K39 SAM 0.009372 0.41457 7.44681
106 4K37 SAM 0.009793 0.41197 7.44681
107 3CB2 GDP 0.02486 0.40625 7.44681
108 4M52 FAD 0.04052 0.40119 7.44681
109 4HDO GNP 0.02211 0.41276 7.78443
110 4COV GLA GAL 0.00000742 0.57616 7.86517
111 1IBR GNP 0.02534 0.40525 7.97872
112 3O84 HTJ 0.04284 0.40253 7.97872
113 4O97 NTX 0.03156 0.40051 7.97872
114 2BO4 FLC 0.008637 0.43882 8.51064
115 4OSP NAP 0.03181 0.4099 8.51064
116 1FLM FMN 0.007341 0.43693 9.01639
117 1TX4 ALF GDP 0.01879 0.41255 9.03955
118 3T7S SAM 0.005818 0.44259 9.04255
119 1UPA TPP 0.03467 0.40341 9.04255
120 2IHT TPP 0.03418 0.40321 9.04255
121 3ITJ FAD 0.01751 0.43887 9.57447
122 4I6H 1C8 0.00552 0.42711 9.57447
123 5UAV TFB 0.01963 0.42111 9.57447
124 5UAV NDP 0.01963 0.42111 9.57447
125 2NP9 YE1 0.01177 0.42664 10.1064
126 2I8T GDD 0.004152 0.45357 10.1796
127 2F5Z FAD 0.0299 0.41801 10.9375
128 1UJ5 5RP 0.006903 0.42849 11.1702
129 1ZBQ NAD 0.03422 0.41395 11.1702
130 1SVK ALF GDP 0.02498 0.4133 11.1702
131 3AFN NAP 0.02405 0.42634 11.7021
132 4G74 FAD 0.02035 0.41941 11.7021
133 2WQQ CSF 0.01996 0.40397 12.766
134 5L3S GNP 0.02901 0.40025 12.766
135 4NJH 2K8 0.01928 0.41283 13.2979
136 4NJH SAM 0.01928 0.41283 13.2979
137 2GAG NAD 0.0185 0.41327 13.8298
138 1YP4 ADQ 0.02608 0.40356 20.7447
139 1ICV FMN 0.04159 0.40222 23.4043
140 1S7G APR 0.04062 0.41091 26.0638
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