Receptor
PDB id Resolution Class Description Source Keywords
5H2D 1.6 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF OSH1 ORD DOMAIN IN COMPLEX WITH ERGOSTE KLUYVEROMYCES LACTIS OXYSTEROL BINDING LIPID TRANSFER ERGOSTEROL LIPID BINDING
Ref.: STRUCTURE OF YEAST OSBP-RELATED PROTEIN OSH1 REVEAL DETERMINANTS FOR LIPID TRANSPORT AND PROTEIN TARGET THE NUCLEUS-VACUOLE JUNCTION STRUCTURE V. 25 617 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SO4 A:1304;
A:1303;
A:1302;
A:1305;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
ERG A:1301;
Valid;
none;
submit data
396.648 C28 H44 O CC(C)...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5H2D 1.6 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF OSH1 ORD DOMAIN IN COMPLEX WITH ERGOSTE KLUYVEROMYCES LACTIS OXYSTEROL BINDING LIPID TRANSFER ERGOSTEROL LIPID BINDING
Ref.: STRUCTURE OF YEAST OSBP-RELATED PROTEIN OSH1 REVEAL DETERMINANTS FOR LIPID TRANSPORT AND PROTEIN TARGET THE NUCLEUS-VACUOLE JUNCTION STRUCTURE V. 25 617 2017
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1610 families.
1 5WVR - CLR C27 H46 O CC(C)CCC[C....
2 5H2D - ERG C28 H44 O CC(C)[C@@H....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1331 families.
1 5WVR - CLR C27 H46 O CC(C)CCC[C....
2 5H2D - ERG C28 H44 O CC(C)[C@@H....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1144 families.
1 5WVR - CLR C27 H46 O CC(C)CCC[C....
2 5H2D - ERG C28 H44 O CC(C)[C@@H....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: ERG; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 ERG 1 1
Similar Ligands (3D)
Ligand no: 1; Ligand: ERG; Similar ligands found: 23
No: Ligand Similarity coefficient
1 CLR 0.9665
2 HCR 0.9612
3 K2B 0.9450
4 HC3 0.9450
5 5JK 0.9394
6 HCD 0.9356
7 HC9 0.9308
8 0T9 0.9305
9 D7S 0.9213
10 DL7 0.9134
11 DL4 0.9132
12 L39 0.9119
13 HC2 0.9119
14 2DC 0.9117
15 TH2 0.8976
16 98H 0.8916
17 LAN 0.8887
18 38O 0.8836
19 C3S 0.8750
20 4D8 0.8672
21 J60 0.8592
22 HE7 0.8566
23 82R 0.8554
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5H2D; Ligand: ERG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 5h2d.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
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