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Receptor
PDB id Resolution Class Description Source Keywords
5F2K 1.6 Å EC: 2.-.-.- CRYSTAL STRUCTURE OF MYCOBACTERIAL FATTY ACID O-METHYLTRANSF COMPLEX WITH SAH AND OCTANOATE MYCOBACTERIUM MARINUM (STRAIN ATCC BAAM) FATTY ACID METHYLTRANSFERASE OCTANOATE METHYLTRANSFERASE TRANSFERASE
Ref.: BIOCHEMICAL STUDIES OF MYCOBACTERIAL FATTY ACID METHYLTRANSFERASE: A CATALYST FOR THE ENZYMATIC PRO OF BIODIESEL. CHEM.BIOL. V. 22 1480 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SAH A:400;
B:400;
Valid;
Valid;
none;
none;
submit data
384.411 C14 H20 N6 O5 S c1nc(...
OCA B:401;
A:401;
Valid;
Valid;
none;
none;
submit data
144.211 C8 H16 O2 CCCCC...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5F2K 1.6 Å EC: 2.-.-.- CRYSTAL STRUCTURE OF MYCOBACTERIAL FATTY ACID O-METHYLTRANSF COMPLEX WITH SAH AND OCTANOATE MYCOBACTERIUM MARINUM (STRAIN ATCC BAAM) FATTY ACID METHYLTRANSFERASE OCTANOATE METHYLTRANSFERASE TRANSFERASE
Ref.: BIOCHEMICAL STUDIES OF MYCOBACTERIAL FATTY ACID METHYLTRANSFERASE: A CATALYST FOR THE ENZYMATIC PRO OF BIODIESEL. CHEM.BIOL. V. 22 1480 2015
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 269 families.
1 5F2O - 5UF C10 H20 O3 CCCCCCC[C@....
2 5F2K - OCA C8 H16 O2 CCCCCCCC(=....
3 5F2N - 5UF C10 H20 O3 CCCCCCC[C@....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 237 families.
1 5F2O - 5UF C10 H20 O3 CCCCCCC[C@....
2 5F2K - OCA C8 H16 O2 CCCCCCCC(=....
3 5F2N - 5UF C10 H20 O3 CCCCCCC[C@....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 187 families.
1 5F2O - 5UF C10 H20 O3 CCCCCCC[C@....
2 5F2K - OCA C8 H16 O2 CCCCCCCC(=....
3 5F2N - 5UF C10 H20 O3 CCCCCCC[C@....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SAH; Similar ligands found: 211
No: Ligand ECFP6 Tc MDL keys Tc
1 SAH 1 1
2 5X8 0.759494 0.969697
3 A7D 0.734177 0.926471
4 TT8 0.709302 0.970588
5 DSH 0.692308 0.914286
6 SXZ 0.692308 0.916667
7 DTA 0.666667 0.857143
8 3DH 0.662338 0.869565
9 S8M 0.655556 0.901408
10 SFG 0.635294 0.954545
11 SA8 0.62069 0.915493
12 EEM 0.617977 0.890411
13 MTA 0.615385 0.869565
14 SAI 0.613636 0.955882
15 S7M 0.586957 0.916667
16 36A 0.586538 0.90411
17 K15 0.583333 0.878378
18 ADN 0.573333 0.84058
19 RAB 0.573333 0.84058
20 XYA 0.573333 0.84058
21 62X 0.572917 0.855263
22 5CD 0.571429 0.852941
23 0UM 0.5625 0.876712
24 5N5 0.558442 0.84058
25 A4D 0.551282 0.867647
26 SAM 0.537634 0.916667
27 SMM 0.536842 0.88
28 SSA 0.536842 0.712644
29 KB1 0.534653 0.902778
30 A5D 0.532609 0.857143
31 SIB 0.53125 0.928571
32 EP4 0.530864 0.819444
33 DSZ 0.530612 0.732558
34 GSU 0.53 0.752941
35 A 0.529412 0.763158
36 LMS 0.529412 0.694118
37 AMP 0.529412 0.763158
38 5CA 0.525773 0.712644
39 ME8 0.524752 0.8125
40 M2T 0.52439 0.821918
41 6RE 0.523256 0.824324
42 GJV 0.522727 0.813333
43 AAT 0.515789 0.863014
44 LSS 0.515152 0.696629
45 KAA 0.514852 0.727273
46 J7C 0.511364 0.835616
47 A5A 0.510417 0.697674
48 SON 0.505495 0.805195
49 SRP 0.505155 0.805195
50 F0P 0.504505 0.915493
51 54H 0.5 0.681818
52 VMS 0.5 0.681818
53 ADX 0.5 0.694118
54 CA0 0.5 0.769231
55 AMO 0.5 0.805195
56 5AL 0.5 0.779221
57 KH3 0.5 0.866667
58 NVA LMS 0.49505 0.707865
59 AHX 0.49505 0.753086
60 TSB 0.494949 0.689655
61 53H 0.494949 0.674157
62 G5A 0.494737 0.712644
63 ABM 0.494382 0.74359
64 A2D 0.494382 0.74359
65 ZAS 0.494253 0.808219
66 A6D 0.490196 0.759494
67 8QN 0.49 0.779221
68 GEK 0.49 0.956522
69 GAP 0.489583 0.769231
70 AN2 0.48913 0.734177
71 A3S 0.48913 0.884058
72 S4M 0.488889 0.831169
73 SRA 0.488636 0.746835
74 LAD 0.485437 0.810127
75 52H 0.484848 0.674157
76 A12 0.483516 0.759494
77 BA3 0.483516 0.74359
78 AP2 0.483516 0.759494
79 NEC 0.483146 0.788732
80 AOC 0.483146 0.842857
81 Y3J 0.481481 0.768116
82 VRT 0.479167 0.861111
83 50T 0.478723 0.734177
84 B4P 0.478261 0.74359
85 ADP 0.478261 0.74359
86 5AS 0.478261 0.655556
87 AP5 0.478261 0.74359
88 A3N 0.477778 0.830986
89 YSA 0.476636 0.712644
90 XAH 0.476636 0.768293
91 0XU 0.473684 0.897059
92 AT4 0.473118 0.7375
93 WAQ 0.471154 0.807692
94 NSS 0.470588 0.712644
95 5AD 0.468354 0.791045
96 AU1 0.468085 0.725
97 M33 0.468085 0.734177
98 MAO 0.467391 0.797468
99 TXA 0.466667 0.759494
100 NB8 0.466667 0.775
101 A3G 0.466667 0.871429
102 3AM 0.465909 0.727273
103 DAL AMP 0.465347 0.779221
104 8X1 0.465347 0.707865
105 A3T 0.463158 0.842857
106 ATP 0.463158 0.74359
107 HEJ 0.463158 0.74359
108 ACP 0.463158 0.746835
109 7D7 0.4625 0.785714
110 LEU LMS 0.461538 0.688889
111 9ZA 0.460784 0.740741
112 9ZD 0.460784 0.740741
113 5FA 0.458333 0.74359
114 AQP 0.458333 0.74359
115 AR6 0.458333 0.766234
116 APC 0.458333 0.759494
117 APR 0.458333 0.766234
118 PRX 0.458333 0.746835
119 F2R 0.457627 0.75
120 IOT 0.456897 0.761905
121 4AD 0.456311 0.794872
122 PAJ 0.456311 0.722892
123 WSA 0.45614 0.72093
124 YAP 0.453704 0.794872
125 8PZ 0.453704 0.712644
126 FA5 0.453704 0.805195
127 ADP PO3 0.453608 0.763158
128 ADV 0.453608 0.782051
129 NVA 2AD 0.453608 0.849315
130 SAP 0.453608 0.728395
131 AGS 0.453608 0.728395
132 RBY 0.453608 0.782051
133 AD9 0.453608 0.725
134 PTJ 0.45283 0.731707
135 MHZ 0.452632 0.797468
136 00A 0.451923 0.740741
137 A3P 0.451613 0.74026
138 YLP 0.451327 0.771084
139 7MD 0.45045 0.768293
140 ALF ADP 0.45 0.707317
141 ADP ALF 0.45 0.707317
142 2VA 0.447917 0.819444
143 OOB 0.446602 0.779221
144 ANP 0.444444 0.725
145 T99 0.444444 0.7375
146 ACQ 0.444444 0.746835
147 TAT 0.444444 0.7375
148 P5A 0.443396 0.719101
149 7D5 0.443182 0.708861
150 A1R 0.442308 0.7625
151 YLC 0.439655 0.790123
152 2AM 0.438202 0.717949
153 DLL 0.438095 0.779221
154 ARG AMP 0.4375 0.759036
155 A22 0.436893 0.734177
156 D3Y 0.436893 0.859155
157 ATF 0.435644 0.716049
158 MYR AMP 0.435185 0.746988
159 80F 0.434426 0.75
160 SO8 0.434343 0.808219
161 OAD 0.433962 0.769231
162 3UK 0.433962 0.769231
163 TAD 0.433628 0.765432
164 25A 0.432692 0.74359
165 6YZ 0.431373 0.746835
166 VO4 ADP 0.431373 0.734177
167 ADP VO4 0.431373 0.734177
168 9SN 0.431193 0.731707
169 TYM 0.431034 0.805195
170 B5V 0.429907 0.759494
171 PR8 0.429907 0.8
172 ADQ 0.428571 0.746835
173 YLB 0.42735 0.771084
174 9K8 0.425926 0.67033
175 1ZZ 0.425926 0.746988
176 FYA 0.425926 0.779221
177 3OD 0.425926 0.769231
178 PPS 0.425743 0.674419
179 MAP 0.423077 0.707317
180 A2P 0.421053 0.727273
181 4YB 0.421053 0.735632
182 9X8 0.420561 0.75
183 ADP BMA 0.420561 0.746835
184 TYR AMP 0.419643 0.794872
185 5SV 0.419048 0.731707
186 3NZ 0.416667 0.824324
187 YLA 0.416667 0.771084
188 8Q2 0.415254 0.688889
189 A3R 0.415094 0.7625
190 B5Y 0.414414 0.75
191 B5M 0.414414 0.75
192 48N 0.413793 0.753086
193 LPA AMP 0.413793 0.768293
194 AYB 0.413223 0.761905
195 ACK 0.413043 0.710526
196 QQY 0.413043 0.696203
197 BIS 0.412844 0.719512
198 JB6 0.412844 0.7625
199 PAP 0.41 0.730769
200 DQV 0.408696 0.75641
201 OVE 0.408602 0.7125
202 AMP DBH 0.40708 0.746835
203 4UV 0.40708 0.75
204 3AD 0.406977 0.852941
205 AF3 ADP 3PG 0.40678 0.743902
206 OMR 0.40678 0.738095
207 LAQ 0.405172 0.768293
208 A A 0.40367 0.74359
209 7C5 0.403509 0.789474
210 7MC 0.403361 0.75
211 4UU 0.4 0.75
Ligand no: 2; Ligand: OCA; Similar ligands found: 54
No: Ligand ECFP6 Tc MDL keys Tc
1 OCA 1 1
2 MYR 0.956522 1
3 EW8 0.956522 1
4 TDA 0.956522 1
5 F15 0.956522 1
6 PLM 0.956522 1
7 STE 0.956522 1
8 X90 0.956522 1
9 DAO 0.956522 1
10 KNA 0.956522 1
11 DCR 0.956522 1
12 F23 0.956522 1
13 11A 0.956522 1
14 DKA 0.956522 1
15 SHV 0.869565 0.952381
16 KTC 0.758621 0.875
17 6NA 0.75 0.904762
18 AZ1 0.695652 0.64
19 OLA 0.6875 0.954545
20 NER 0.6875 0.954545
21 ELA 0.6875 0.954545
22 PML 0.652174 0.6
23 VCA 0.636364 0.954545
24 PAM 0.636364 0.954545
25 LEA 0.625 0.809524
26 3LA 0.575758 0.8
27 MYZ 0.558824 0.909091
28 12H 0.551724 0.615385
29 ODD 0.540541 0.913043
30 BRC 0.533333 0.666667
31 14V 0.527778 0.740741
32 M12 0.515152 0.869565
33 14U 0.514286 0.703704
34 EOD 0.512821 0.7
35 EIC 0.512821 0.913043
36 BUA 0.5 0.666667
37 D0G 0.472222 0.954545
38 BMJ 0.472222 0.954545
39 BNV 0.472222 0.954545
40 OOA 0.454545 0.76
41 9J6 0.454545 0.666667
42 RCL 0.446809 0.84
43 5UF 0.444444 0.807692
44 HXD 0.432432 0.807692
45 56S 0.432432 0.653846
46 FTT 0.432432 0.807692
47 ODT 0.428571 0.782609
48 LNL 0.418605 0.826087
49 3X1 0.416667 0.818182
50 6UL 0.410256 0.68
51 CUY 0.410256 0.68
52 CNS 0.410256 0.68
53 243 0.408163 0.807692
54 HOC 0.4 0.769231
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5F2K; Ligand: OCA; Similar sites found with APoc: 183
This union binding pocket(no: 1) in the query (biounit: 5f2k.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 6GKV SAH 1.1396
2 1Z3C SA8 1.34228
3 3TKY SAH 1.3587
4 4DMG SAM 1.63043
5 3G2O SAM 1.67224
6 1VE3 SAM 1.76211
7 2PX8 SAH 1.90217
8 4UCI SAM 1.90217
9 3MB5 SAM 1.96078
10 1Y8Q ATP 2.02312
11 3ZJX BOG 2.07612
12 1RJD SAM 2.09581
13 6D6Y SAH 2.17391
14 2JHP SAH 2.17391
15 2C7G FAD 2.17391
16 1KYZ SAH 2.19178
17 1KYZ FER 2.19178
18 2UYQ SAM 2.25806
19 3JWH SAH 2.30415
20 3BGD SAH 2.30769
21 3BGD PM6 2.30769
22 1G55 SAH 2.33236
23 4S00 AKR 2.44565
24 3PT9 SAH 2.44565
25 5XLX SAH 2.48227
26 2P41 SAH 2.62295
27 5FUB SAH 2.67062
28 3VSE SAH 2.71739
29 2JK0 ASP 2.76923
30 1L1E SAH 2.78746
31 2WA2 SAM 2.89855
32 5W7R SAH 2.98913
33 5THY SAH 2.98913
34 5THZ SAH 2.98913
35 3X0D SAH 2.98913
36 5CUQ NSC 2.99625
37 4POO SAM 3
38 5YF1 SFG 3.03867
39 5YF1 8V0 3.03867
40 4IWN GEK 3.05677
41 3FRH SAH 3.16206
42 2EJU SAH 3.1746
43 5W7K SAH 3.20513
44 1IM8 SAI 3.26087
45 2ALG DAO 3.26087
46 3EVG SAH 3.27273
47 4X7Y SAH 3.28467
48 3P9C SAH 3.2967
49 6HOY TSN 3.31126
50 1EJ0 SAM 3.33333
51 2WNF CG3 A2G GAL 3.3557
52 1WY7 SAH 3.38164
53 3LCC SAH 3.40426
54 2BZG SAH 3.44828
55 1KPG SAH 3.48432
56 1KPH SAH 3.48432
57 4R6W PC 3.48837
58 4R6W SAH 3.48837
59 3GU3 SAH 3.52113
60 5JJR SAH 3.53261
61 2JJQ SAH 3.53261
62 1V6A TRE 3.53261
63 2IZ1 ATR 3.53261
64 4C4A SAH 3.53261
65 2Q4X HMH 3.61991
66 5DX1 SFG 3.72493
67 5DXA SFG 3.72493
68 5DX8 SFG 3.72493
69 5DWQ SFG 3.72493
70 6ARJ BW4 3.72493
71 5DX0 SFG 3.72493
72 5E1M SAH 3.73444
73 5E1M PRO PRO LYS ARG ILE ALA 3.73444
74 3O7W SAM 3.7415
75 5DM1 SAH 3.74532
76 5DM1 5D7 3.74532
77 5MPT SAH 3.80435
78 5EEH SAH 3.80435
79 5EEH P9P 3.80435
80 5FTW SAH 3.90625
81 3G89 SAM 4.01606
82 2XVM SAH 4.0201
83 5FA5 MTA 4.07609
84 4GQB 0XU 4.07609
85 5YKT PMP 4.07609
86 1UAY ADN 4.13223
87 5DLY 5D7 4.13534
88 5DLY SAH 4.13534
89 1TPY SAH 4.18118
90 3I53 SAH 4.21687
91 5GWX SAR 4.22535
92 5GWX SAM 4.22535
93 5ICE 2H4 4.26136
94 5ICE SAH 4.26136
95 2V3V MGD 4.34783
96 4M37 SAH 4.37318
97 4M38 SAH 4.37318
98 5W7M SAH 4.48718
99 3FZG SAM 4.5
100 6DUB SAH 4.5045
101 4A6D SAM 4.53258
102 1LT3 GAL BGC 4.58333
103 3DXY SAM 4.58716
104 5KOK SAH 4.61957
105 2ZWA SAH 4.61957
106 5KOK S9T 4.61957
107 5KOK R9T 4.61957
108 1YXM ADE 4.62046
109 3OFK SAH 4.62963
110 2PXX SAH 4.65116
111 6FDF SAH 4.79042
112 2AOT SAH 4.79452
113 1JQD SAH 4.79452
114 1JQD HSM 4.79452
115 2YVK MRU 4.8913
116 3VV5 SLZ 5
117 5L95 AMP 5
118 5WP5 SAH 5.16304
119 5WP4 SAH 5.16304
120 5X62 SAH 5.16304
121 5ERG SAM 5.16304
122 5M58 SAH 5.21739
123 3EGI ADP 5.33981
124 5HJM MTA 5.39773
125 6GPA GAL 5.41401
126 2A14 SAH 5.43478
127 4N49 SAM 5.43478
128 3C3Y SAH 5.48523
129 2OBF F83 5.53633
130 2OBF SAH 5.53633
131 2HMT NAI 5.55556
132 3CBG SAH 5.70652
133 3QOX SAH 5.70652
134 3GRU AMP 5.76271
135 5MGZ SAH 5.9322
136 4M73 SAH 5.93472
137 4M73 M72 5.93472
138 1LTT GAL BGC 5.94595
139 2VDV SAM 6.25
140 2FK8 SAM 6.52174
141 5KF6 TFB 6.52174
142 2Z6J TUI 6.62651
143 5YJI 8WO 6.69014
144 5YJI SAH 6.69014
145 4DCM SAM 6.79348
146 1P1C SAH 7.03518
147 5E9W SAH 7.05128
148 5E8J SAH 7.05128
149 1BC5 SAH 7.06522
150 4PIO AVI 7.12074
151 4PIO SAH 7.12074
152 3VYW SAM 7.14286
153 5C9P FUC 7.33696
154 1G8K MGD 7.5188
155 4ONQ SFG 7.84314
156 1XDS SAM 7.88043
157 1QZZ SAM 7.88043
158 4REI 3MV 7.88043
159 1Q0S SAH 8.10811
160 4QTU SAM 8.14815
161 2VT3 ATP 8.37209
162 5O2Z FLC 8.40336
163 1ZQ9 SAM 8.42391
164 1O5O U5P 8.59729
165 3GCZ SAM 8.86525
166 4OBW SAM 8.94942
167 4AZW SAM 9.51087
168 2WK1 SAH 9.92908
169 1LSS NAD 10
170 4YFY 0FX 10.0543
171 5ZW3 SAH 10.2222
172 3GWZ SAH 10.5978
173 3GXO SAH 10.5978
174 1BWO LPC 11.1111
175 3VC1 SAH 11.2179
176 3VC1 GST 11.2179
177 4YAC NAI 11.4478
178 1U2Z SAH 11.6848
179 2YX1 SFG 12.7976
180 3DUW SAH 13.9013
181 4RDI ATP 15.625
182 2EFJ SAH 35.3261
183 2EG5 SAH 38.8587
Pocket No.: 2; Query (leader) PDB : 5F2K; Ligand: OCA; Similar sites found with APoc: 26
This union binding pocket(no: 2) in the query (biounit: 5f2k.bio1) has 31 residues
No: Leader PDB Ligand Sequence Similarity
1 3ELW SAM 1.33333
2 3LJU IP9 1.90217
3 2V57 PRL 3.15789
4 3HVJ 705 3.16742
5 5JE8 NAD 3.97351
6 4X60 3XV 4.07609
7 4X60 SFG 4.07609
8 3G4Q MCH 4.10959
9 4DHL 0K7 4.34783
10 1RJW ETF 4.42478
11 5NM7 GLY 4.51128
12 4XUC SAM 4.61957
13 4XUC 43G 4.61957
14 5DF1 58X 4.61957
15 5DF1 NAP 4.61957
16 2WPF FAD 4.61957
17 2WPF WPF 4.61957
18 5NE2 DGL 5.39568
19 6G5J EM8 5.45455
20 4RSL FAD 6.79348
21 4Y9D NAI 7.86885
22 3ML1 MGD 9.62963
23 2R2N KYN 10.0543
24 1GTE FAD 14.4022
25 2EFJ 37T 35.3261
26 2EG5 XTS 38.8587
Pocket No.: 3; Query (leader) PDB : 5F2K; Ligand: SAH; Similar sites found with APoc: 183
This union binding pocket(no: 3) in the query (biounit: 5f2k.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 6GKV SAH 1.1396
2 1Z3C SA8 1.34228
3 3TKY SAH 1.3587
4 4DMG SAM 1.63043
5 3G2O SAM 1.67224
6 1VE3 SAM 1.76211
7 2PX8 SAH 1.90217
8 4UCI SAM 1.90217
9 3MB5 SAM 1.96078
10 1Y8Q ATP 2.02312
11 3ZJX BOG 2.07612
12 1RJD SAM 2.09581
13 6D6Y SAH 2.17391
14 2JHP SAH 2.17391
15 2C7G FAD 2.17391
16 1KYZ SAH 2.19178
17 1KYZ FER 2.19178
18 2UYQ SAM 2.25806
19 3JWH SAH 2.30415
20 3BGD SAH 2.30769
21 3BGD PM6 2.30769
22 1G55 SAH 2.33236
23 4S00 AKR 2.44565
24 3PT9 SAH 2.44565
25 5XLX SAH 2.48227
26 2P41 SAH 2.62295
27 5FUB SAH 2.67062
28 3VSE SAH 2.71739
29 2JK0 ASP 2.76923
30 1L1E SAH 2.78746
31 2WA2 SAM 2.89855
32 5W7R SAH 2.98913
33 5THY SAH 2.98913
34 5THZ SAH 2.98913
35 3X0D SAH 2.98913
36 5CUQ NSC 2.99625
37 4POO SAM 3
38 5YF1 SFG 3.03867
39 5YF1 8V0 3.03867
40 4IWN GEK 3.05677
41 3FRH SAH 3.16206
42 2EJU SAH 3.1746
43 5W7K SAH 3.20513
44 1IM8 SAI 3.26087
45 2ALG DAO 3.26087
46 3EVG SAH 3.27273
47 4X7Y SAH 3.28467
48 3P9C SAH 3.2967
49 6HOY TSN 3.31126
50 1EJ0 SAM 3.33333
51 2WNF CG3 A2G GAL 3.3557
52 1WY7 SAH 3.38164
53 3LCC SAH 3.40426
54 2BZG SAH 3.44828
55 1KPG SAH 3.48432
56 1KPH SAH 3.48432
57 4R6W PC 3.48837
58 4R6W SAH 3.48837
59 3GU3 SAH 3.52113
60 5JJR SAH 3.53261
61 2JJQ SAH 3.53261
62 1V6A TRE 3.53261
63 2IZ1 ATR 3.53261
64 4C4A SAH 3.53261
65 2Q4X HMH 3.61991
66 5DX1 SFG 3.72493
67 5DXA SFG 3.72493
68 5DX8 SFG 3.72493
69 5DWQ SFG 3.72493
70 6ARJ BW4 3.72493
71 5DX0 SFG 3.72493
72 5E1M SAH 3.73444
73 5E1M PRO PRO LYS ARG ILE ALA 3.73444
74 3O7W SAM 3.7415
75 5DM1 SAH 3.74532
76 5DM1 5D7 3.74532
77 5MPT SAH 3.80435
78 5EEH SAH 3.80435
79 5EEH P9P 3.80435
80 5FTW SAH 3.90625
81 3G89 SAM 4.01606
82 2XVM SAH 4.0201
83 5FA5 MTA 4.07609
84 4GQB 0XU 4.07609
85 5YKT PMP 4.07609
86 1UAY ADN 4.13223
87 5DLY 5D7 4.13534
88 5DLY SAH 4.13534
89 1TPY SAH 4.18118
90 3I53 SAH 4.21687
91 5GWX SAR 4.22535
92 5GWX SAM 4.22535
93 5ICE 2H4 4.26136
94 5ICE SAH 4.26136
95 2V3V MGD 4.34783
96 4M37 SAH 4.37318
97 4M38 SAH 4.37318
98 5W7M SAH 4.48718
99 3FZG SAM 4.5
100 6DUB SAH 4.5045
101 4A6D SAM 4.53258
102 1LT3 GAL BGC 4.58333
103 3DXY SAM 4.58716
104 5KOK SAH 4.61957
105 2ZWA SAH 4.61957
106 5KOK S9T 4.61957
107 5KOK R9T 4.61957
108 1YXM ADE 4.62046
109 3OFK SAH 4.62963
110 2PXX SAH 4.65116
111 6FDF SAH 4.79042
112 2AOT SAH 4.79452
113 1JQD SAH 4.79452
114 1JQD HSM 4.79452
115 2YVK MRU 4.8913
116 3VV5 SLZ 5
117 5L95 AMP 5
118 5WP5 SAH 5.16304
119 5WP4 SAH 5.16304
120 5X62 SAH 5.16304
121 5ERG SAM 5.16304
122 5M58 SAH 5.21739
123 3EGI ADP 5.33981
124 5HJM MTA 5.39773
125 6GPA GAL 5.41401
126 2A14 SAH 5.43478
127 4N49 SAM 5.43478
128 3C3Y SAH 5.48523
129 2OBF F83 5.53633
130 2OBF SAH 5.53633
131 2HMT NAI 5.55556
132 3CBG SAH 5.70652
133 3QOX SAH 5.70652
134 3GRU AMP 5.76271
135 5MGZ SAH 5.9322
136 4M73 SAH 5.93472
137 4M73 M72 5.93472
138 1LTT GAL BGC 5.94595
139 2VDV SAM 6.25
140 2FK8 SAM 6.52174
141 5KF6 TFB 6.52174
142 2Z6J TUI 6.62651
143 5YJI SAH 6.69014
144 5YJI 8WO 6.69014
145 4DCM SAM 6.79348
146 1P1C SAH 7.03518
147 5E9W SAH 7.05128
148 5E8J SAH 7.05128
149 1BC5 SAH 7.06522
150 4PIO AVI 7.12074
151 4PIO SAH 7.12074
152 3VYW SAM 7.14286
153 5C9P FUC 7.33696
154 1G8K MGD 7.5188
155 4ONQ SFG 7.84314
156 1XDS SAM 7.88043
157 1QZZ SAM 7.88043
158 4REI 3MV 7.88043
159 1Q0S SAH 8.10811
160 4QTU SAM 8.14815
161 2VT3 ATP 8.37209
162 5O2Z FLC 8.40336
163 1ZQ9 SAM 8.42391
164 1O5O U5P 8.59729
165 3GCZ SAM 8.86525
166 4OBW SAM 8.94942
167 4AZW SAM 9.51087
168 2WK1 SAH 9.92908
169 1LSS NAD 10
170 4YFY 0FX 10.0543
171 5ZW3 SAH 10.2222
172 3GWZ SAH 10.5978
173 3GXO SAH 10.5978
174 1BWO LPC 11.1111
175 3VC1 SAH 11.2179
176 3VC1 GST 11.2179
177 4YAC NAI 11.4478
178 1U2Z SAH 11.6848
179 2YX1 SFG 12.7976
180 3DUW SAH 13.9013
181 4RDI ATP 15.625
182 2EFJ SAH 35.3261
183 2EG5 SAH 38.8587
Pocket No.: 4; Query (leader) PDB : 5F2K; Ligand: SAH; Similar sites found with APoc: 26
This union binding pocket(no: 4) in the query (biounit: 5f2k.bio1) has 31 residues
No: Leader PDB Ligand Sequence Similarity
1 3ELW SAM 1.33333
2 3LJU IP9 1.90217
3 2V57 PRL 3.15789
4 3HVJ 705 3.16742
5 5JE8 NAD 3.97351
6 4X60 3XV 4.07609
7 4X60 SFG 4.07609
8 3G4Q MCH 4.10959
9 4DHL 0K7 4.34783
10 1RJW ETF 4.42478
11 5NM7 GLY 4.51128
12 4XUC SAM 4.61957
13 4XUC 43G 4.61957
14 5DF1 58X 4.61957
15 5DF1 NAP 4.61957
16 2WPF FAD 4.61957
17 2WPF WPF 4.61957
18 5NE2 DGL 5.39568
19 6G5J EM8 5.45455
20 4RSL FAD 6.79348
21 4Y9D NAI 7.86885
22 3ML1 MGD 9.62963
23 2R2N KYN 10.0543
24 1GTE FAD 14.4022
25 2EFJ 37T 35.3261
26 2EG5 XTS 38.8587
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