Receptor
PDB id Resolution Class Description Source Keywords
5E65 2.2 Å EC: 7.-.-.- THE COMPLEX STRUCTURE OF HEMAGGLUTININ-ESTERASE-FUSION MUTAN FROM THE INFLUENZA D VIRUS WITH RECEPTOR ANALOG 9-O-AC-3'SL INFLUENZA D VIRUS (D/SWINE/OKLAHOMA/13ORGANISM_TAXID: 1173138 INFLUENZA VIRUS HEF MEMBRANE HYDROLASE
Ref.: AN OPEN RECEPTOR-BINDING CAVITY OF HEMAGGLUTININ-ESTERASE-FUSION GLYCOPROTEIN FROM NEWLY-IDENTIFIED INFLUENZA D VIRUS: BASIS FOR ITS B TROPISM PLOS PATHOG. V. 12 05411 2016
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAG NAG A:713;
C:709;
C:707;
B:701;
D:701;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
submit data
408.404 n/a O=C(N...
NAG NAG BMA MAN MAN MAN A:707;
C:701;
A:701;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
n/a n/a
NAG D:703;
B:703;
Invalid;
Invalid;
none;
none;
submit data
221.208 C8 H15 N O6 CC(=O...
5N6 GAL C:711;
A:715;
Valid;
Valid;
none;
none;
submit data
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5E65 2.2 Å EC: 7.-.-.- THE COMPLEX STRUCTURE OF HEMAGGLUTININ-ESTERASE-FUSION MUTAN FROM THE INFLUENZA D VIRUS WITH RECEPTOR ANALOG 9-O-AC-3'SL INFLUENZA D VIRUS (D/SWINE/OKLAHOMA/13ORGANISM_TAXID: 1173138 INFLUENZA VIRUS HEF MEMBRANE HYDROLASE
Ref.: AN OPEN RECEPTOR-BINDING CAVITY OF HEMAGGLUTININ-ESTERASE-FUSION GLYCOPROTEIN FROM NEWLY-IDENTIFIED INFLUENZA D VIRUS: BASIS FOR ITS B TROPISM PLOS PATHOG. V. 12 05411 2016
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 311 families.
1 5E65 - 5N6 GAL n/a n/a
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 266 families.
1 5E62 - Z3Q GAL 5N6 n/a n/a
2 5E65 - 5N6 GAL n/a n/a
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 218 families.
1 5E62 - Z3Q GAL 5N6 n/a n/a
2 5E65 - 5N6 GAL n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: 5N6 GAL; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5E65; Ligand: 5N6 GAL; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 5e65.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
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