Receptor
PDB id Resolution Class Description Source Keywords
4ZTD 2.2 Å NON-ENZYME: IMMUNE CRYSTAL STRUCTURE OF HUMAN PCNA IN COMPLEX WITH A TRAIP PEPT HOMO SAPIENS PCNA TRAIP COMPLEX REPLICATION
Ref.: TRAIP IS A PCNA-BINDING UBIQUITIN LIGASE THAT PROTE GENOME STABILITY AFTER REPLICATION STRESS. J.CELL BIOL. V. 212 63 2016
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ALA GLY ALA GLY ALA F:461;
 Valid;
 Atoms found LESS than expected: % Diff = 0.042;
 submit data
330.365 n/a O=C(N...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4ZTD 2.2 Å NON-ENZYME: IMMUNE CRYSTAL STRUCTURE OF HUMAN PCNA IN COMPLEX WITH A TRAIP PEPT HOMO SAPIENS PCNA TRAIP COMPLEX REPLICATION
Ref.: TRAIP IS A PCNA-BINDING UBIQUITIN LIGASE THAT PROTE GENOME STABILITY AFTER REPLICATION STRESS. J.CELL BIOL. V. 212 63 2016
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 225 families.
1 4ZTD - ALA GLY ALA GLY ALA n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 67 families.
1 4ZTD - ALA GLY ALA GLY ALA n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 45 families.
1 4ZTD - ALA GLY ALA GLY ALA n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: ALA GLY ALA GLY ALA; Similar ligands found: 5
No: Ligand ECFP6 Tc MDL keys Tc
1 ALA GLY ALA GLY ALA 1 1
2 ALA GLY ALA ALA 0.729167 1
3 ALA GLY GLY ALA ALA ALA ALA ALA 0.586207 0.970588
4 ILE GLY LEU TRP LYS SER 0.46875 0.916667
5 ALA VAL GLY ILE GLY ALA VAL PHE 0.454545 0.891892
Similar Ligands (3D)
Ligand no: 1; Ligand: ALA GLY ALA GLY ALA; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4ZTD; Ligand: ALA GLY ALA GLY ALA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4ztd.bio1) has 11 residues
No: Leader PDB Ligand Sequence Similarity
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