Receptor
PDB id Resolution Class Description Source Keywords
4ZNO 1.86 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF DLN1 COMPLEXED WITH SUCROSE DANIO RERIO PORE-FORMING PROTEIN AEOLYSIN-LIKE PROTEIN VETEBRATE HIGHGLYCANS COMPLEX SUGAR BINDING PROTEIN
Ref.: STRUCTURAL BASIS FOR RECEPTOR RECOGNITION AND PORE OF A ZEBRAFISH AEROLYSIN-LIKE PROTEIN. EMBO REP. V. 17 235 2016
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CL B:402;
A:402;
Invalid;
Invalid;
none;
none;
submit data
35.453 Cl [Cl-]
EPE B:403;
Invalid;
none;
submit data
238.305 C8 H18 N2 O4 S C1CN(...
SUC A:401;
B:401;
Valid;
Valid;
none;
none;
submit data
342.296 C12 H22 O11 C([C@...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4ZNO 1.86 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF DLN1 COMPLEXED WITH SUCROSE DANIO RERIO PORE-FORMING PROTEIN AEOLYSIN-LIKE PROTEIN VETEBRATE HIGHGLYCANS COMPLEX SUGAR BINDING PROTEIN
Ref.: STRUCTURAL BASIS FOR RECEPTOR RECOGNITION AND PORE OF A ZEBRAFISH AEROLYSIN-LIKE PROTEIN. EMBO REP. V. 17 235 2016
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 4ZNO - SUC C12 H22 O11 C([C@@H]1[....
2 4ZNR - MAN MAN n/a n/a
3 4ZNQ - MAN MAN n/a n/a
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 4ZNO - SUC C12 H22 O11 C([C@@H]1[....
2 4ZNR - MAN MAN n/a n/a
3 4ZNQ - MAN MAN n/a n/a
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 4ZNO - SUC C12 H22 O11 C([C@@H]1[....
2 4ZNR - MAN MAN n/a n/a
3 4ZNQ - MAN MAN n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SUC; Similar ligands found: 16
No: Ligand ECFP6 Tc MDL keys Tc
1 SUC 1 1
2 SWE 1 1
3 RAF 0.736842 0.972973
4 STW 0.724138 0.972973
5 SUP 0.701754 0.8
6 DQR 0.666667 0.972973
7 NYT 0.612903 0.972973
8 FNY 0.612903 0.972973
9 20S 0.534247 0.8
10 SUC GLA 0.5 0.921053
11 AGR 0.467532 0.782609
12 TRE 0.42 0.864865
13 AMG 0.411765 0.789474
14 MMA 0.411765 0.789474
15 GYP 0.411765 0.789474
16 MBG 0.411765 0.789474
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4ZNO; Ligand: SUC; Similar sites found with APoc: 1
This union binding pocket(no: 1) in the query (biounit: 4zno.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 5V6F MAN BMA MAN 9.42029
Pocket No.: 2; Query (leader) PDB : 4ZNO; Ligand: SUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 4zno.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
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