Receptor
PDB id Resolution Class Description Source Keywords
4YDX 1.6 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF CISPLATIN BOUND TO A HUMAN COPPER CHAPE (MONOMER) - NEW REFINEMENT HOMO SAPIENS RE-REFINEMENT OF 3IWL CISPLATIN PLATINUM METAL-BINDING MTRANSPORT
Ref.: CRYSTALLOGRAPHY AND CHEMISTRY SHOULD ALWAYS GO TOGE CAUTIONARY TALE OF PROTEIN COMPLEXES WITH CISPLATIN CARBOPLATIN. ACTA CRYSTALLOGR.,SECT.D V. 71 1965 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SO4 A:102;
Invalid;
none;
submit data
96.063 O4 S [O-]S...
PT A:101;
Invalid;
none;
submit data
195.078 Pt [Pt+2...
TCE A:103;
Valid;
none;
submit data
250.186 C9 H15 O6 P C(CP(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4YDX 1.6 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF CISPLATIN BOUND TO A HUMAN COPPER CHAPE (MONOMER) - NEW REFINEMENT HOMO SAPIENS RE-REFINEMENT OF 3IWL CISPLATIN PLATINUM METAL-BINDING MTRANSPORT
Ref.: CRYSTALLOGRAPHY AND CHEMISTRY SHOULD ALWAYS GO TOGE CAUTIONARY TALE OF PROTEIN COMPLEXES WITH CISPLATIN CARBOPLATIN. ACTA CRYSTALLOGR.,SECT.D V. 71 1965 2015
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 232 families.
1 1FEE - GLC FRU n/a n/a
2 4YDX - TCE C9 H15 O6 P C(CP(CCC(=....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 197 families.
1 1FEE - GLC FRU n/a n/a
2 4YDX - TCE C9 H15 O6 P C(CP(CCC(=....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 165 families.
1 1FEE - GLC FRU n/a n/a
2 4YDX - TCE C9 H15 O6 P C(CP(CCC(=....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: TCE; Similar ligands found: 2
No: Ligand ECFP6 Tc MDL keys Tc
1 TCE 1 1
2 SIN 0.45 0.625
Similar Ligands (3D)
Ligand no: 1; Ligand: TCE; Similar ligands found: 1
No: Ligand Similarity coefficient
1 Z3P 0.9168
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4YDX; Ligand: TCE; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4ydx.bio1) has 6 residues
No: Leader PDB Ligand Sequence Similarity
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