Receptor
PDB id Resolution Class Description Source Keywords
4XYB 1.38 Å EC: 1.2.1.2 GRANULICELLA M. FORMATE DEHYDROGENASE (FDH) IN COMPLEX WITH AND NAN3 GRANULICELLA MALLENSIS (STRAIN ATCC BADSM 23137 / MP5ACTX8) OXIDOREDUCTASE FORMATE DEHYDROGENASE NADP
Ref.: STRUCTURAL BASIS FOR DOUBLE COFACTOR SPECIFICITY IN FORMATE DEHYDROGENASE FROM THE ACIDOBACTERIUM GRANU MALLENSIS MP5ACTX8. APPL.MICROBIOL.BIOTECHNOL. V. 99 9541 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
AZI B:402;
A:402;
Invalid;
Invalid;
none;
none;
submit data
42.02 N3 [N-]=...
EDO A:404;
A:405;
B:403;
A:403;
B:404;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
submit data
62.068 C2 H6 O2 C(CO)...
NDP A:401;
B:401;
Valid;
Valid;
none;
none;
submit data
745.421 C21 H30 N7 O17 P3 c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4XYB 1.38 Å EC: 1.2.1.2 GRANULICELLA M. FORMATE DEHYDROGENASE (FDH) IN COMPLEX WITH AND NAN3 GRANULICELLA MALLENSIS (STRAIN ATCC BADSM 23137 / MP5ACTX8) OXIDOREDUCTASE FORMATE DEHYDROGENASE NADP
Ref.: STRUCTURAL BASIS FOR DOUBLE COFACTOR SPECIFICITY IN FORMATE DEHYDROGENASE FROM THE ACIDOBACTERIUM GRANU MALLENSIS MP5ACTX8. APPL.MICROBIOL.BIOTECHNOL. V. 99 9541 2015
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 4XYE - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
2 4XYB - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 4XYE - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
2 4XYB - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
3 2GSD - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
4 2NAD Ki = 0.1 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 4XYE - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
2 4XYB - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
3 5DN9 Kd = 92 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
4 2GSD - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
5 2NAD Ki = 0.1 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NDP; Similar ligands found: 159
No: Ligand ECFP6 Tc MDL keys Tc
1 NDP 1 1
2 0WD 0.827273 1
3 NAI 0.803738 0.986842
4 NMN AMP PO4 0.794643 0.948052
5 NPW 0.692308 0.962025
6 NZQ 0.686441 0.987013
7 DG1 0.68 1
8 1DG 0.68 1
9 A2R 0.650943 0.909091
10 A22 0.64486 0.934211
11 TXP 0.644628 0.924051
12 ATR 0.640777 0.894737
13 NA7 0.636364 0.886076
14 XNP 0.620968 0.949367
15 AP0 0.598361 0.948718
16 A2P 0.598039 0.881579
17 NJP 0.574803 0.923077
18 25L 0.550847 0.934211
19 ODP 0.550388 0.936709
20 NAX 0.544 0.949367
21 25A 0.53913 0.921053
22 2AM 0.529412 0.87013
23 6V0 0.519685 0.974026
24 NAP 0.514493 0.922078
25 EAD 0.507143 0.949367
26 A2D 0.504673 0.921053
27 TXE 0.503876 0.935897
28 NA0 0.496454 0.910256
29 TXD 0.496124 0.911392
30 SAP 0.495575 0.875
31 AGS 0.495575 0.875
32 P1H 0.493056 0.925926
33 CO7 0.489796 0.791209
34 TAP 0.489362 0.864198
35 PAP 0.482456 0.907895
36 BA3 0.481818 0.921053
37 NAJ PZO 0.478261 0.924051
38 ATP 0.477876 0.921053
39 B4P 0.477477 0.921053
40 ADP 0.477477 0.921053
41 AP5 0.477477 0.921053
42 OAD 0.47541 0.897436
43 5FA 0.473684 0.921053
44 AR6 0.473684 0.896104
45 APR 0.473684 0.896104
46 AQP 0.473684 0.921053
47 AN2 0.473214 0.909091
48 3OD 0.467742 0.897436
49 50T 0.464912 0.884615
50 PO4 PO4 A A A A PO4 0.463415 0.857143
51 V3L 0.461538 0.896104
52 2A5 0.46087 0.85
53 A1R 0.459016 0.841463
54 ADQ 0.459016 0.897436
55 4AD 0.459016 0.875
56 OVE 0.458716 0.8375
57 OMR 0.458647 0.813953
58 PPS 0.457627 0.811765
59 AD9 0.456897 0.897436
60 CA0 0.45614 0.897436
61 M33 0.45614 0.884615
62 ADJ 0.455882 0.879518
63 A3P 0.455357 0.894737
64 ACP 0.452174 0.897436
65 ENP 0.451613 0.85
66 UP5 0.451128 0.948052
67 SRP 0.45 0.8625
68 ANP 0.449153 0.897436
69 ACQ 0.449153 0.897436
70 PRX 0.448276 0.82716
71 5AL 0.445378 0.884615
72 7D4 0.443478 0.8375
73 ADX 0.443478 0.811765
74 AMP 0.436364 0.894737
75 A 0.436364 0.894737
76 4TC 0.433824 0.924051
77 7D3 0.433628 0.8375
78 ETB 0.433566 0.797753
79 DCA 0.433566 0.788889
80 1ZZ 0.433071 0.802326
81 BIS 0.433071 0.864198
82 00A 0.432 0.864198
83 ATF 0.429752 0.886076
84 0T1 0.427586 0.788889
85 5SV 0.427419 0.788235
86 8QN 0.427419 0.884615
87 3AM 0.427273 0.857143
88 N01 0.426573 0.884615
89 PR8 0.425197 0.811765
90 WAQ 0.425197 0.841463
91 LAD 0.425197 0.821429
92 DTP 0.425 0.8375
93 AMO 0.424 0.886076
94 PAJ 0.424 0.843373
95 APC 0.423729 0.886076
96 UPA 0.423358 0.935897
97 48N 0.422222 0.853659
98 FYA 0.421875 0.860759
99 PTJ 0.421875 0.853659
100 CNA 0.421429 0.910256
101 PUA 0.42069 0.9125
102 NXX 0.419118 0.910256
103 DND 0.419118 0.910256
104 AV2 0.418033 0.848101
105 COA 0.417808 0.788889
106 3UK 0.417323 0.897436
107 OOB 0.416 0.909091
108 IVC 0.415584 0.78022
109 DAT 0.415254 0.8375
110 NDO 0.414966 0.897436
111 139 0.414286 0.901235
112 3AT 0.413223 0.896104
113 TAT 0.413223 0.886076
114 YLB 0.413043 0.784091
115 62F 0.4125 0.823529
116 ABM 0.412281 0.848101
117 YAP 0.412214 0.875
118 YLP 0.411765 0.784091
119 ME8 0.410853 0.802326
120 NB8 0.410853 0.853659
121 SON 0.410256 0.886076
122 DLL 0.409449 0.909091
123 AHX 0.409449 0.853659
124 COS 0.409396 0.771739
125 AMX 0.409396 0.797753
126 CAO 0.409396 0.763441
127 30N 0.409396 0.72449
128 7D5 0.409091 0.8125
129 4UW 0.408759 0.9125
130 APX 0.407692 0.841463
131 SRA 0.40708 0.85
132 CMX 0.406667 0.788889
133 SCO 0.406667 0.788889
134 TYM 0.405797 0.886076
135 COD 0.405594 0.777778
136 OXK 0.405229 0.771739
137 CA6 0.405229 0.70297
138 A12 0.405172 0.886076
139 AP2 0.405172 0.886076
140 9SN 0.40458 0.853659
141 LAQ 0.404412 0.802326
142 T5A 0.404255 0.914634
143 FAM 0.403974 0.771739
144 ACO 0.403974 0.763441
145 FCX 0.403974 0.763441
146 AMP MG 0.403509 0.825
147 VO4 ADP 0.403226 0.860759
148 ADP VO4 0.403226 0.860759
149 YLC 0.402878 0.823529
150 1VU 0.402597 0.763441
151 FA5 0.401515 0.886076
152 HAX 0.401316 0.771739
153 APU 0.4 0.923077
154 TXA 0.4 0.886076
155 A U 0.4 0.898734
156 4UU 0.4 0.948052
157 AFH 0.4 0.843373
158 CAJ 0.4 0.771739
159 AR6 AR6 0.4 0.871795
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4XYB; Ligand: NDP; Similar sites found: 354
This union binding pocket(no: 1) in the query (biounit: 4xyb.bio1) has 35 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1U3U NAD 0.00009934 0.46152 1.06952
2 1U3U BNF 0.00009934 0.46152 1.06952
3 2VHW NAI 0.000006464 0.49697 1.32626
4 1D1T NAD 0.00006952 0.45006 1.34048
5 1XSE NDP 0.003858 0.40046 1.35593
6 5LD5 NAD 0.00002209 0.43197 1.39665
7 2Q1W NAD 0.001156 0.40986 1.5015
8 1YKJ PHB 0.001602 0.43195 1.53453
9 1YKJ FAD 0.001602 0.43195 1.53453
10 1M2W NAD 0.002651 0.42627 1.53453
11 1PS9 FAD 0.003835 0.40156 1.53453
12 2FZW NAD 0.0002412 0.44832 1.60858
13 1K3T BRZ 0.001568 0.40527 1.67131
14 1EBF NAD 0.000002723 0.46877 1.67598
15 1ZH8 NAP 0.0002538 0.41796 1.76471
16 2CDU FAD 0.002671 0.40199 1.76991
17 3OND NAD 0.00001176 0.50213 1.79028
18 3OND ADN 0.00001176 0.50213 1.79028
19 3ETG GLU 0.00199 0.42218 1.79028
20 3ETG NDP 0.002072 0.42151 1.79028
21 2YG3 FAD 0.001402 0.41669 1.79028
22 3ETG GTP 0.001839 0.41639 1.79028
23 4IDC NDP 0.0003549 0.4285 1.80723
24 4IDC 1XX 0.0003549 0.4285 1.80723
25 1KYQ NAD 0.000007803 0.41869 1.82482
26 1XHC FAD 0.001229 0.41424 1.90736
27 2YY7 NAD 0.001123 0.4038 1.92308
28 2QRK AMP 0.0002912 0.43948 2.04604
29 1UWK NAD 0.0006278 0.43488 2.04604
30 1UWK URO 0.0006278 0.43488 2.04604
31 4OOE NDP 0.002604 0.43073 2.04604
32 4OOE FOM 0.002604 0.43073 2.04604
33 4TXI FAD 0.0005724 0.41745 2.04604
34 4RSL FAD 0.001265 0.41379 2.04604
35 2NPX NAD 0.004205 0.41271 2.04604
36 2BRY FAD 0.00109 0.41062 2.04604
37 4G74 FAD 0.001999 0.40656 2.04604
38 1RM0 NAI 0.018 0.40615 2.04604
39 4G74 UQ5 0.00443 0.40474 2.04604
40 2GMH FAD 0.003705 0.40211 2.04604
41 1X87 NAD 0.0002577 0.40098 2.04604
42 4L8V NAP 0.00004154 0.45135 2.07715
43 3V1Y NAD 0.00002756 0.44409 2.07715
44 1E3I CXF 0.0001404 0.43717 2.12766
45 2HJR APR 0.000004076 0.45663 2.13415
46 5GZ6 7C3 0.0001151 0.4131 2.14724
47 5GZ6 NDP 0.00007008 0.41104 2.14724
48 3GD4 NAD 0.01196 0.40355 2.15264
49 3GD4 FAD 0.007747 0.40238 2.15264
50 5UAV NDP 0.00003655 0.46966 2.17391
51 5UAV TFB 0.00003655 0.46966 2.17391
52 1PL6 572 0.0003668 0.42477 2.24719
53 1PL6 NAD 0.00004656 0.41812 2.24719
54 3VPH NAD 0.00003455 0.46437 2.25806
55 3VPH OXM 0.00006909 0.45821 2.25806
56 3TWO NDP 0.00002105 0.47686 2.29885
57 1OC2 TDX 0.001859 0.42492 2.29885
58 1OC2 NAD 0.001859 0.42492 2.29885
59 3OJO NAD 0.00001596 0.43968 2.30179
60 1U8X NAD 0.001449 0.42792 2.30179
61 5JWC FAD 0.001366 0.41136 2.30179
62 2VVM FAD 0.002331 0.40854 2.30179
63 1Q9I FAD 0.006107 0.40569 2.30179
64 1Q9I TEO 0.006107 0.40569 2.30179
65 5H81 NAP 0.000009331 0.44135 2.31362
66 4XQC NAD 0.00003788 0.47831 2.31579
67 4XQC 13D 0.00005065 0.47478 2.31579
68 3JV7 NAD 0.00005968 0.44496 2.31884
69 1E6E FAD 0.001862 0.40769 2.34375
70 4JNA FAD 0.0008297 0.42726 2.35294
71 3NYC IAR 0.00273 0.41527 2.3622
72 3NYC FAD 0.00273 0.41527 2.3622
73 4PLT OXM 0.00004144 0.40015 2.41692
74 3CIF NAD 0.00004638 0.44478 2.50696
75 3CIF G3H 0.0005886 0.42458 2.50696
76 2HK9 NAP 0.0002926 0.4113 2.54545
77 1U1I NAD 0.0001876 0.44114 2.55754
78 4HXY NDP 0.0003942 0.42092 2.55754
79 5MQ6 NDP 0.0001576 0.4099 2.55754
80 5MBX FAD 0.005338 0.40647 2.55754
81 5MBX SP5 0.005338 0.40647 2.55754
82 5GUD NDP 0.002561 0.40598 2.55754
83 3CGD FAD 0.01343 0.40311 2.55754
84 3CGD COA 0.01343 0.40311 2.55754
85 3CGD NAD 0.01343 0.40311 2.55754
86 5KKA 6V0 0.0001958 0.43447 2.5641
87 3L4S 3PG 0.0002246 0.43512 2.67857
88 3L4S NAD 0.0001812 0.43512 2.67857
89 2PZM NAD 0.00212 0.4131 2.72727
90 2PZM UDP 0.00212 0.4131 2.72727
91 1VL8 NAP 0.001263 0.41381 2.8133
92 4REP FAD 0.001586 0.41363 2.8133
93 5G3U FDA 0.001901 0.40964 2.8133
94 5G3U ITW 0.003615 0.40539 2.8133
95 5I39 FAD 0.003292 0.4009 2.8133
96 1LDN NAD 0.000004876 0.48743 2.8481
97 1X7D ORN 0.0002008 0.44411 2.85714
98 1X7D NAD 0.00009092 0.43546 2.85714
99 3KLJ FAD 0.001032 0.41153 2.85714
100 4D3F NAP 0.00006131 0.41898 2.90323
101 3ABI NAD 0.00005729 0.44578 3.0137
102 2VYN NAD 0.00009229 0.43441 3.02115
103 3AB1 FAD 0.002079 0.41038 3.05556
104 1WDK NAD 0.00003406 0.42964 3.06905
105 2WPF FAD 0.006753 0.4217 3.06905
106 2WPF WPF 0.008757 0.41837 3.06905
107 4D04 NAP 0.00425 0.41533 3.06905
108 4D04 FAD 0.00425 0.41533 3.06905
109 1V59 FAD 0.002092 0.41524 3.06905
110 5BUK FAD 0.00374 0.40484 3.06905
111 2IVD FAD 0.002275 0.40453 3.06905
112 4EIP K2C 0.005404 0.40061 3.06905
113 4EIP FAD 0.005404 0.40061 3.06905
114 3WMX NAD 0.0009408 0.40307 3.07263
115 5JY6 NAD 0.0008423 0.43387 3.08989
116 1BXK NAD 0.0004443 0.41228 3.09859
117 1YKF NAP 0.0001453 0.43265 3.125
118 4J7U NAP 0.001955 0.41342 3.125
119 4J7U YTZ 0.001955 0.41342 3.125
120 5J60 FAD 0.003748 0.40092 3.125
121 3OA2 NAD 0.0002405 0.41999 3.14465
122 3GGO ENO 0.0001117 0.45844 3.18471
123 3GGO NAI 0.0001117 0.45844 3.18471
124 2G5C NAD 0.00005618 0.44523 3.20285
125 3O9Z NAD 0.0008405 0.43012 3.20513
126 3O9Z AKG 0.001798 0.41675 3.20513
127 2GZ3 NAP 0.000314 0.4492 3.27869
128 4XB2 HSE 0.00001984 0.46919 3.28358
129 4XB2 NDP 0.000002779 0.46279 3.28358
130 5T9F TYR 0.0005444 0.42832 3.32103
131 5T9F NAP 0.0006331 0.4247 3.32103
132 5T9E NAP 0.0006269 0.40134 3.32103
133 5JCA NDP 0.007016 0.40612 3.32481
134 5JCA FAD 0.003267 0.40513 3.32481
135 4EMI NAD 0.008983 0.40124 3.32481
136 2A92 NAI 0.00003486 0.46112 3.42679
137 1F06 2NP 0.0003121 0.43319 3.4375
138 1F06 NDP 0.0003121 0.43319 3.4375
139 3CTY FAD 0.002656 0.4104 3.44828
140 2AHR NAP 0.0008478 0.41012 3.4749
141 1BZL FAD 0.006719 0.42225 3.49794
142 1E5Q NDP 0.00003728 0.44735 3.58056
143 1D4D FAD 0.001098 0.42377 3.58056
144 1O94 ADP 0.0001856 0.40925 3.58056
145 1DJN ADP 0.0001321 0.40908 3.58056
146 3ORF NAD 0.0007781 0.40352 3.58566
147 3CMC NAD 0.0008418 0.44508 3.59281
148 4DPL NAP 0.00006368 0.44557 3.62117
149 1O6Z NAD 0.00003535 0.4345 3.63036
150 5O4J PJL 0.001374 0.40751 3.64964
151 5O4J 9KH 0.002007 0.40411 3.64964
152 5O4J SAH 0.002007 0.40411 3.64964
153 2CVQ NDP 0.0001486 0.42878 3.66972
154 5THQ NDP 0.001347 0.40011 3.67647
155 2D2I NAP 0.0002151 0.40431 3.68421
156 5MZI FYK 0.004103 0.41455 3.68764
157 5MZI FAD 0.00412 0.41377 3.68764
158 2PV7 NAD 0.00002875 0.44744 3.69128
159 4YCA NDP 0.00008789 0.43043 3.7415
160 1P0F NAP 0.00009833 0.44467 3.75335
161 3H8V ATP 0.00002265 0.40734 3.76712
162 2CDC XYP 0.0001911 0.46972 3.82514
163 2CDC NAP 0.0002865 0.4628 3.82514
164 2CDC XYS 0.0002865 0.4628 3.82514
165 1YQD NAP 0.0001586 0.44086 3.82514
166 5M67 ADE 0.00002281 0.49238 3.83632
167 5M67 NAD 0.00002342 0.49194 3.83632
168 5M67 3D1 0.00003213 0.48674 3.83632
169 3WLE NAD 0.00005038 0.4646 3.83632
170 1WP4 NDP 0.00003301 0.44691 3.83632
171 4J36 1HR 0.0009514 0.42609 3.83632
172 5A04 NDP 0.001961 0.42403 3.83632
173 5A04 BGC 0.002447 0.42403 3.83632
174 4J36 FAD 0.0004883 0.42321 3.83632
175 2CVZ NDP 0.0002052 0.41605 3.83632
176 2VVL FAD 0.002436 0.40886 3.83632
177 2Y6Q FAD 0.001157 0.40684 3.83632
178 2Y6Q I7T 0.003696 0.40684 3.83632
179 1QO8 FAD 0.003258 0.40517 3.83632
180 4ZRN UPG 0.001937 0.41923 3.84615
181 4ZRN NAD 0.001349 0.41031 3.84615
182 4J4H 1J1 0.00003473 0.48323 3.861
183 4J4H NAI 0.00003473 0.48323 3.861
184 4JK3 NAD 0.000002151 0.48178 3.861
185 4ZCC NAI 0.002018 0.42028 3.86905
186 4ZCC FAD 0.002018 0.42028 3.86905
187 5AYV NAP 0.00003837 0.42835 3.8835
188 5AYV KPL 0.0006381 0.42331 3.8835
189 4RVU NDP 0.001704 0.40666 3.91566
190 5FI3 NAP 0.0001253 0.43371 3.92157
191 1CER NAD 0.00001991 0.50295 3.92749
192 4RQU NAD 0.00009988 0.43461 4
193 4K28 NAD 0.000006029 0.45765 4.08922
194 3SQP FAD 0.03285 0.40958 4.09207
195 3I6I NDP 0.002096 0.40809 4.09207
196 3B20 NAD 0.0001005 0.4171 4.12979
197 1YB5 NAP 0.0003021 0.4337 4.2735
198 3GFB NAD 0.000005513 0.47185 4.28571
199 1YJQ NAP 0.0001469 0.44194 4.29043
200 2Q7V FAD 0.003383 0.40357 4.30769
201 2DFV NAD 0.00002799 0.44906 4.32277
202 1H82 GZZ 0.00107 0.43808 4.34783
203 1H82 FAD 0.0009661 0.4359 4.34783
204 4AP3 FAD 0.003007 0.41982 4.34783
205 4AP3 NAP 0.003007 0.41982 4.34783
206 1YY5 FAD 0.002089 0.41431 4.34783
207 1RSG FAD 0.002 0.41306 4.34783
208 5BVA FAD 0.002883 0.40907 4.34783
209 2IID PHE 0.005205 0.4069 4.34783
210 2IID FAD 0.005205 0.4069 4.34783
211 1PN0 FAD 0.004238 0.40547 4.34783
212 1PN0 IPH 0.004463 0.40547 4.34783
213 2XVE FAD 0.007574 0.40414 4.34783
214 3QVP FAD 0.004213 0.40196 4.34783
215 5VKT NAP 0.0005137 0.41374 4.41989
216 1NYT NAP 0.0005173 0.40234 4.42804
217 2EV9 NAP 0.00059 0.41761 4.56274
218 2EV9 SKM 0.00059 0.41761 4.56274
219 3NJ4 NAD 0.00008174 0.50992 4.60358
220 3NJ4 AFX 0.0002001 0.49349 4.60358
221 2JHF NAD 0.0004389 0.48421 4.60358
222 5VN0 NAI 0.002337 0.41955 4.60358
223 2ZXI FAD 0.001344 0.41401 4.60358
224 2GVC FAD 0.001119 0.41005 4.60358
225 2GV8 FAD 0.001528 0.40836 4.60358
226 1VQW FAD 0.001501 0.40551 4.60358
227 2B4R NAD 0.0000857 0.44319 4.63768
228 2B4R AES 0.0002034 0.42666 4.63768
229 2VT3 ATP 0.00000114 0.41466 4.65116
230 2DC1 NAD 0.00001572 0.45729 4.66102
231 2DT5 NAD 0.000004492 0.47918 4.73934
232 2CUL FAD 0.00107 0.41519 4.74138
233 4GKV NAD 0.00001894 0.47697 4.7619
234 4B7X NAP 0.000232 0.43513 4.7619
235 1KEV NDP 0.00005149 0.46135 4.8433
236 2F5Z FAD 0.003841 0.40347 4.85933
237 1ZMD FAD 0.003919 0.40314 4.85933
238 1ZMD NAI 0.0004224 0.40067 4.85933
239 3WGT FAD 0.0009481 0.43007 4.89914
240 3WGT QSC 0.001036 0.42954 4.89914
241 3ZNN 4WL 0.002344 0.4218 4.89914
242 3ZNN FAD 0.002344 0.4218 4.89914
243 5GT9 NAP 0.0007016 0.41181 4.94297
244 4NTC FAD 0.001679 0.41486 5.07463
245 5CAE SIN 0.00006824 0.45349 5.11182
246 5CAE COA 0.000008139 0.45199 5.11182
247 1MV8 NAD 0.00001337 0.45452 5.11509
248 1MUU NAD 0.00002447 0.44095 5.11509
249 4MDH NAD 0.0001001 0.43093 5.11509
250 5MDH NAD 0.0001774 0.42281 5.11509
251 3UCL NAP 0.004416 0.41793 5.11509
252 3G5S FAD 0.001672 0.41055 5.11509
253 2Z3Y F2N 0.002487 0.41052 5.11509
254 3UCL FAD 0.006208 0.41017 5.11509
255 3UCL CYH 0.006208 0.41017 5.11509
256 1GUZ NAD 0.00001658 0.46175 5.16129
257 3HAD NAD 0.0005113 0.44117 5.19481
258 1NVT NAP 0.0003387 0.40121 5.22648
259 3CH6 311 0.009345 0.40123 5.24476
260 3CH6 NAP 0.009345 0.40123 5.24476
261 2ZB4 5OP 0.002318 0.40649 5.32213
262 2ZB4 NAP 0.002561 0.40379 5.32213
263 1BXG NAD 0.00001279 0.45465 5.33708
264 1BW9 NAD 0.000003065 0.45073 5.33708
265 1C1X NAD 0.00001088 0.45792 5.35211
266 1CF2 NAP 0.00004369 0.439 5.37084
267 4MOP 2H5 0.002083 0.42059 5.37084
268 4JDR FAD 0.001567 0.41597 5.37084
269 4X9M FAD 0.003879 0.40037 5.37084
270 2F1K NAP 0.00001611 0.45186 5.37634
271 1V8B NAD 0.000003295 0.50759 5.6266
272 1FEC FAD 0.001805 0.41858 5.6266
273 3UOY NAP 0.006122 0.41167 5.6266
274 3UOY FAD 0.006122 0.41167 5.6266
275 3RJ5 NAD 0.002354 0.40624 5.6266
276 1YQZ FAD 0.008144 0.40223 5.6266
277 5U5G NAP 0.00008637 0.43656 5.76271
278 1MO9 FAD 0.005116 0.42062 5.88235
279 1MO9 KPC 0.005594 0.41958 5.88235
280 4OPC PGT 0.01663 0.40922 5.88235
281 4OPC FDA 0.01419 0.40922 5.88235
282 1GPE FAD 0.003196 0.40832 5.88235
283 4M52 FAD 0.003915 0.4022 5.88235
284 2I3G NAP 0.00006329 0.44749 5.96591
285 4ZVV GN0 0.00004756 0.48915 6.0241
286 4ZVV NAD 0.00004756 0.48915 6.0241
287 2ZJ1 ARJ 0.00004365 0.4838 6.13811
288 2ZJ1 NAD 0.00005005 0.48154 6.13811
289 1O8B ABF 0.0136 0.42923 6.39269
290 4FWE FAD 0.001765 0.41608 6.39386
291 4GUT FAD 0.002145 0.41575 6.39386
292 4GUS FAD 0.002178 0.41364 6.39386
293 2RAB NAD 0.006466 0.41011 6.39386
294 4HSU FAD 0.002734 0.40993 6.39386
295 4KP7 NAP 0.004502 0.40447 6.39386
296 3WQQ IB3 0.003222 0.40436 6.39386
297 3WQQ NDP 0.003222 0.40436 6.39386
298 4KP7 1UQ 0.003983 0.40288 6.39386
299 1XG5 NAP 0.001286 0.40293 6.45161
300 2V3A FAD 0.001174 0.41731 6.51042
301 2DM6 IMN 0.0001228 0.45447 6.60661
302 2DM6 NAP 0.0002497 0.44192 6.60661
303 4EDF UPG 0.00147 0.42287 6.64962
304 2E5V FAD 0.001837 0.41543 6.64962
305 3LAD FAD 0.002753 0.40789 6.64962
306 1JNR FAD 0.007122 0.4126 6.66667
307 1CDO NAD 0.0003939 0.40945 6.68449
308 4CNK FAD 0.002871 0.40308 6.90537
309 5U8U FAD 0.003665 0.4192 7.16113
310 1J0X NAD 0.0003667 0.44154 7.22892
311 5TTJ FAD 0.003445 0.40124 7.41688
312 1OMO NAD 0.0000139 0.44646 7.45342
313 1KEW NAD 0.004144 0.40835 7.47922
314 3WV8 ATP 0.00005552 0.4059 7.79817
315 1LLU NAD 0.000007492 0.49146 7.89474
316 3AD8 NAD 0.00178 0.40597 8.08081
317 2FR1 NDP 0.0002298 0.4318 8.18414
318 2WET FAD 0.003357 0.4037 8.4399
319 1EZ4 NAD 0.00000926 0.46258 8.49057
320 4MP8 MLI 0.01047 0.40853 8.84956
321 4MP8 NAD 0.01047 0.40853 8.84956
322 5X20 NAD 0.0001962 0.4124 8.95141
323 1PZG A3D 0.00009639 0.45573 9.36556
324 3AYI FAD 0.001665 0.42433 9.46292
325 3AYI HCI 0.00175 0.42433 9.46292
326 1NVM NAD 0.00005906 0.44932 9.9359
327 1I36 NAP 0.0001769 0.40105 10.2273
328 3RNM FAD 0.003476 0.40509 10.3448
329 2AE2 PTO 0.001372 0.41704 10.3846
330 2AE2 NAP 0.001372 0.41704 10.3846
331 1GQ2 NAP 0.0000818 0.43688 10.4859
332 5DOZ NDP 0.0009792 0.41785 10.6509
333 2GAG NAD 0.00236 0.40509 11.1111
334 5JE8 NAD 0.00001173 0.51673 11.2583
335 2YYY NAP 0.0007264 0.40521 11.3703
336 4BVA NDP 0.0003124 0.42436 11.509
337 4BVA T3 0.001859 0.41 11.509
338 1HYH NAD 0.000002463 0.4977 11.7647
339 1VM6 NAD 0.0001615 0.41733 12.7877
340 5JCJ NAP 0.00351 0.40714 14.2361
341 3QV1 NAD 0.00001605 0.44694 14.6341
342 2V3B FAD 0.001175 0.41614 16.3636
343 1AE1 NAP 0.001089 0.41076 17.9487
344 4YSX FAD 0.0006483 0.42905 21.7949
345 4ZGS NAD 0.00000000003571 0.61812 26.087
346 1J49 NAD 0.0000000001248 0.63101 28.2282
347 2O4C NAD 0.000000001234 0.61063 28.9474
348 1SC6 NAD 0.00000008311 0.55184 30.4348
349 2GCG NDP 0.000000001318 0.59978 32.4242
350 4E5N NAD 0.000000000007253 0.687 33.0303
351 3KB6 NAD 0.00000000002023 0.64912 34.1317
352 3BAZ NAP 0.0006757 0.44105 34.5345
353 2DBZ NAP 0.00000000007332 0.63902 40.7186
354 5N53 8NB 0.00002414 0.58636 47.6923
Pocket No.: 2; Query (leader) PDB : 4XYB; Ligand: NDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 4xyb.bio1) has 34 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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