Receptor
PDB id Resolution Class Description Source Keywords
4TU7 2.09 Å NON-ENZYME: OTHER STRUCTURE OF U2AF65 D231V VARIANT WITH BRU5 DNA HOMO SAPIENS PRE-MRNA SPLICING FACTOR RNA RECOGNITION MOTIF RNA BINDINGDNA COMPLEX
Ref.: STRUCTURE-GUIDED U2AF65 VARIANT IMPROVES RECOGNITIO SPLICING OF A DEFECTIVE PRE-MRNA. PROC.NATL.ACAD.SCI.USA V. 111 17420 2014
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
DIO B:401;
B:402;
A:401;
A:402;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
88.105 C4 H8 O2 C1COC...
SO4 B:404;
A:403;
A:405;
B:406;
A:404;
B:405;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
GOL A:408;
A:406;
A:407;
B:407;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
CPQ B:403;
Invalid;
none;
submit data
862.056 C42 H75 N3 O15 C[C@H...
DU DU DU DU BRU DU DU P:1;
E:1;
Valid;
Valid;
none;
none;
submit data
2042.06 n/a BrC=1...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4TU8 1.92 Å NON-ENZYME: OTHER STRUCTURE OF U2AF65 VARIANT WITH BRU5A6 DNA HOMO SAPIENS RNA SPLICING FACTOR RNA RECOGNITION MOTIF RNA BINDING PROTBINDING PROTEIN-DNA COMPLEX
Ref.: STRUCTURE-GUIDED U2AF65 VARIANT IMPROVES RECOGNITIO SPLICING OF A DEFECTIVE PRE-MRNA. PROC.NATL.ACAD.SCI.USA V. 111 17420 2014
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 4TU9 - DU DU DU DU BRU DG DU n/a n/a
2 4TU8 - DU DU DU DU BRU DA DU n/a n/a
3 4TU7 - DU DU DU DU BRU DU DU n/a n/a
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 4TU9 - DU DU DU DU BRU DG DU n/a n/a
2 4TU8 - DU DU DU DU BRU DA DU n/a n/a
3 4TU7 - DU DU DU DU BRU DU DU n/a n/a
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 4TU9 - DU DU DU DU BRU DG DU n/a n/a
2 4TU8 - DU DU DU DU BRU DA DU n/a n/a
3 4TU7 - DU DU DU DU BRU DU DU n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: DU DU DU DU BRU DU DU ; Similar ligands found: 30
No: Ligand ECFP6 Tc MDL keys Tc
1 DU DU DU DU BRU DU DU 1 1
2 DU DU DU DU BRU DA DU 0.699187 0.888889
3 DU DU DU DU BRU DG DU 0.699187 0.837209
4 DT DT DT DT DT 0.563636 0.87013
5 DT DT DT 0.563107 0.88
6 BRU 0.536082 0.932432
7 DUT MG 0.533981 0.866667
8 DU 0.53125 0.864865
9 UMP 0.53125 0.864865
10 UMP AF3 PO4 0.528846 0.881579
11 DT DT PST 0.521739 0.858974
12 DT ME6 DT 0.520325 0.848101
13 DUD 0.52 0.853333
14 UM3 0.515789 0.851351
15 DUN 0.509804 0.831169
16 3PD UM3 0.496063 0.755814
17 DUP 0.495238 0.831169
18 UC5 0.490196 0.842105
19 DUT 0.485714 0.853333
20 DC DC DT DG 0.45082 0.820513
21 DUS 0.45 0.768293
22 DUR 0.446809 0.808219
23 DA DT DA DA 0.429577 0.819277
24 DT DC 0.426357 0.835443
25 DC DG 0.422222 0.77907
26 DT MA7 DT 0.417808 0.77907
27 5HU 0.40566 0.868421
28 DG DT DC 0.402778 0.764045
29 5IU 0.401869 0.906667
30 DT 64T DT DT 0.401235 0.819277
Similar Binding Sites (Proteins are less than 50% similar to leader)
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