Receptor
PDB id Resolution Class Description Source Keywords
4REI 1.49 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF GINSENG MAJOR LATEX-LIKE PROTEIN 151 (G PANAX GINSENG. (CRYSTAL-2) PANAX GINSENG MAJOR LATEX-LIKE PROTEIN PROTEIN BINDING
Ref.: STRUCTURE OF GINSENG MAJOR LATEX-LIKE PROTEIN 151 A PROPOSED LYSOPHOSPHATIDIC ACID-BINDING MECHANISM. ACTA CRYSTALLOGR.,SECT.D V. 71 1039 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
3MV A:201;
Valid;
none;
submit data
156.308 C11 H24 CC[C@...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4REI 1.49 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF GINSENG MAJOR LATEX-LIKE PROTEIN 151 (G PANAX GINSENG. (CRYSTAL-2) PANAX GINSENG MAJOR LATEX-LIKE PROTEIN PROTEIN BINDING
Ref.: STRUCTURE OF GINSENG MAJOR LATEX-LIKE PROTEIN 151 A PROPOSED LYSOPHOSPHATIDIC ACID-BINDING MECHANISM. ACTA CRYSTALLOGR.,SECT.D V. 71 1039 2015
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 4REI - 3MV C11 H24 CC[C@@H](C....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 4REI - 3MV C11 H24 CC[C@@H](C....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 4REI - 3MV C11 H24 CC[C@@H](C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: 3MV; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 3MV 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4REI; Ligand: 3MV; Similar sites found: 49
This union binding pocket(no: 1) in the query (biounit: 4rei.bio1) has 13 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3RUU 37G 0.01432 0.42749 None
2 4N1T 2GD 0.03475 0.41011 None
3 2ZCQ B65 0.0209 0.43286 1.3245
4 4XBT 3ZQ 0.002725 0.40264 1.3245
5 3RGA LSB 0.005626 0.43158 1.98676
6 5APK 76E 0.03339 0.40635 2.64901
7 4ZOM 4Q3 0.03875 0.40485 2.64901
8 2OVW CBI 0.004405 0.42387 3.31126
9 4B1L FRU 0.003379 0.42216 3.31126
10 5C1P ADP 0.02592 0.40115 3.31126
11 3OV6 MK0 0.01105 0.43433 3.97351
12 5DQ8 FLF 0.0375 0.40679 3.97351
13 1P6O HPY 0.01368 0.4001 4.63576
14 4N14 WR7 0.002361 0.43116 5.29801
15 1DFO FFO 0.01854 0.40498 5.29801
16 5XSS XYP 0.01606 0.40101 5.29801
17 1MDC PLM 0.01752 0.4158 5.30303
18 1ZB6 DIN 0.0163 0.42476 5.96026
19 1FNN ADP 0.01877 0.40875 6.62252
20 3W8X FAD 0.03477 0.42155 7.28477
21 4EIL FOL 0.01626 0.40864 7.28477
22 3EWR APR 0.03336 0.40297 7.28477
23 5F2K OCA 0.02553 0.4183 7.88043
24 5F2K SAH 0.02553 0.4183 7.88043
25 4K3H 1OM 0.02197 0.40583 8.47458
26 4IAE 1DX 0.01983 0.42312 8.60927
27 1I06 TZL 0.007692 0.41204 8.60927
28 4BTK DTQ 0.02126 0.4054 8.60927
29 2VBF TPP 0.03427 0.4071 9.27152
30 5M67 NAD 0.0258 0.4319 9.93377
31 5FBN 5WF 0.01933 0.4254 9.93377
32 1GQG DCD 0.01696 0.41462 9.93377
33 4UUG PXG 0.02299 0.4113 9.93377
34 4R38 RBF 0.01278 0.41872 10.7143
35 2HJR APR 0.03535 0.40099 12.5828
36 2R40 EPH 0.01457 0.42625 13.245
37 1LF9 ACR 0.01037 0.41997 15.894
38 1ODM ASV 0.01807 0.41587 15.894
39 4MIG G3F 0.04758 0.41506 15.894
40 4V24 GYR 0.0226 0.41254 16.5563
41 2Z6D FMN 0.01545 0.41186 16.9231
42 4PSB GA3 0.01425 0.4314 22.5166
43 3OJI PYV 0.01083 0.42113 22.5166
44 5JO1 6LM 0.01123 0.42079 22.5166
45 4DS8 A8S 0.008138 0.41998 22.5166
46 4Q0K GA3 0.003165 0.44173 23.1788
47 3KDJ A8S 0.005034 0.43695 26.4901
48 3JRS A8S 0.01343 0.41183 26.4901
49 5EGH PC 0.01162 0.40902 27.1523
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