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Receptor
PDB id Resolution Class Description Source Keywords
4OK9 1.91 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE SINGLE-STRANDED RNA BINDING PROTEIN GEOBACILLUS THERMODENITRIFICANS GEOBACILLUS THERMODENITRIFICANS ANTITERMINATION SINGLE STRANDED RNA BINDING PROTEIN RNA BIPROTEIN
Ref.: CRYSTAL STRUCTURE OF THE SINGLE-STRANDED RNA BINDIN HUTP FROM GEOBACILLUS THERMODENITRIFICANS BIOCHEM.BIOPHYS.RES.COMMUN. V. 446 945 2014
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MG B:203;
B:202;
A:202;
A:203;
B:201;
A:201;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
HIS B:204;
A:204;
Valid;
Valid;
none;
none;
submit data
156.162 C6 H10 N3 O2 c1c([...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4OK9 1.91 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE SINGLE-STRANDED RNA BINDING PROTEIN GEOBACILLUS THERMODENITRIFICANS GEOBACILLUS THERMODENITRIFICANS ANTITERMINATION SINGLE STRANDED RNA BINDING PROTEIN RNA BIPROTEIN
Ref.: CRYSTAL STRUCTURE OF THE SINGLE-STRANDED RNA BINDIN HUTP FROM GEOBACILLUS THERMODENITRIFICANS BIOCHEM.BIOPHYS.RES.COMMUN. V. 446 945 2014
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 4OKQ - HIS C6 H10 N3 O2 c1c([nH+]c....
2 4OK9 - HIS C6 H10 N3 O2 c1c([nH+]c....
70% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 1WPV - HIS C6 H10 N3 O2 c1c([nH+]c....
2 1WRN - HIS C6 H10 N3 O2 c1c([nH+]c....
3 1WRO - HIS C6 H10 N3 O2 c1c([nH+]c....
4 4H4L - HIS C6 H10 N3 O2 c1c([nH+]c....
5 4OKQ - HIS C6 H10 N3 O2 c1c([nH+]c....
6 4OK9 - HIS C6 H10 N3 O2 c1c([nH+]c....
50% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 1WPV - HIS C6 H10 N3 O2 c1c([nH+]c....
2 1WRN - HIS C6 H10 N3 O2 c1c([nH+]c....
3 1WRO - HIS C6 H10 N3 O2 c1c([nH+]c....
4 4H4L - HIS C6 H10 N3 O2 c1c([nH+]c....
5 4OKQ - HIS C6 H10 N3 O2 c1c([nH+]c....
6 4OK9 - HIS C6 H10 N3 O2 c1c([nH+]c....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: HIS; Similar ligands found: 3
No: Ligand ECFP6 Tc MDL keys Tc
1 HIS 1 1
2 DHI 1 1
3 HSO 0.52381 0.846154
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4OK9; Ligand: HIS; Similar sites found with APoc: 1
This union binding pocket(no: 1) in the query (biounit: 4ok9.bio1) has 14 residues
No: Leader PDB Ligand Sequence Similarity
1 5FJJ MAN 6.04027
Pocket No.: 2; Query (leader) PDB : 4OK9; Ligand: HIS; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 4ok9.bio1) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 4OK9; Ligand: HIS; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 4ok9.bio1) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 4OK9; Ligand: HIS; Similar sites found with APoc: 4
This union binding pocket(no: 4) in the query (biounit: 4ok9.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
1 5H2U 1N1 2.68456
2 3SAO DBH 4.02685
3 5X1M DHB 7.38255
4 5X1M THG 7.38255
Pocket No.: 5; Query (leader) PDB : 4OK9; Ligand: HIS; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 4ok9.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 4OK9; Ligand: HIS; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 4ok9.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
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