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Receptor
PDB id Resolution Class Description Source Keywords
4OI4 2.4 Å EC: 2.7.1.78 PROTEIN COMPLEX OF CLP1 BOUND TO ATP AND MG2+ WITH PCF11DELTAN454DELTAC563 OF S. CEREVISIAE SACCHAROMYCES CEREVISIAE POLYNUCLEOTIDE KINASE CLP1 PCF11 CLEAVAGE FACTOR IA 3-prime -EPROCESSING TRANSCRIPTION
Ref.: RNA SPECIFICITY AND REGULATION OF CATALYSIS IN THE EUKARYOTIC POLYNUCLEOTIDE KINASE CLP1. MOL.CELL V. 54 975 2014
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GOL A:503;
C:504;
C:503;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
MG A:502;
C:502;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
ATP C:501;
A:501;
Valid;
Valid;
none;
none;
submit data
507.181 C10 H16 N5 O13 P3 c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4OI4 2.4 Å EC: 2.7.1.78 PROTEIN COMPLEX OF CLP1 BOUND TO ATP AND MG2+ WITH PCF11DELTAN454DELTAC563 OF S. CEREVISIAE SACCHAROMYCES CEREVISIAE POLYNUCLEOTIDE KINASE CLP1 PCF11 CLEAVAGE FACTOR IA 3-prime -EPROCESSING TRANSCRIPTION
Ref.: RNA SPECIFICITY AND REGULATION OF CATALYSIS IN THE EUKARYOTIC POLYNUCLEOTIDE KINASE CLP1. MOL.CELL V. 54 975 2014
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 4OI4 - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 4OI4 - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 4OI4 - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ATP; Similar ligands found: 422
No: Ligand ECFP6 Tc MDL keys Tc
1 HEJ 1 1
2 ATP 1 1
3 5FA 0.985507 1
4 AQP 0.985507 1
5 AP5 0.927536 0.971831
6 B4P 0.927536 0.971831
7 BA3 0.913043 0.971831
8 ADP 0.9 1
9 A2D 0.884058 0.971831
10 AGS 0.84 0.945946
11 SAP 0.84 0.945946
12 6YZ 0.833333 0.972222
13 AT4 0.810811 0.958904
14 AN2 0.810811 0.985915
15 25L 0.809524 0.985915
16 AR6 0.802632 0.971831
17 APR 0.802632 0.971831
18 M33 0.8 0.958333
19 ACQ 0.794872 0.972222
20 TAT 0.794872 0.958904
21 T99 0.794872 0.958904
22 AD9 0.792208 0.972222
23 ACP 0.789474 0.972222
24 AMP 0.788732 0.971429
25 A 0.788732 0.971429
26 ANP 0.772152 0.972222
27 CA0 0.753247 0.945205
28 ADX 0.753247 0.873418
29 A22 0.746988 0.985915
30 50T 0.74359 0.958333
31 PRX 0.734177 0.893333
32 APC 0.734177 0.958904
33 ABM 0.733333 0.917808
34 ATF 0.731707 0.958904
35 ITT 0.730769 0.943662
36 7D4 0.730769 0.905405
37 ADQ 0.729412 0.945205
38 A3R 0.729412 0.907895
39 AP2 0.714286 0.958904
40 A12 0.714286 0.958904
41 A1R 0.709302 0.907895
42 SRA 0.706667 0.918919
43 5AL 0.698795 0.931507
44 HFD 0.695122 0.945946
45 9X8 0.693182 0.92
46 OAD 0.693182 0.945205
47 AU1 0.6875 0.972222
48 SRP 0.682353 0.906667
49 G5P 0.680851 0.921053
50 25A 0.678161 0.971831
51 3OD 0.677778 0.945205
52 4AD 0.670455 0.92
53 G3A 0.670213 0.921053
54 00A 0.662921 0.883117
55 RBY 0.662651 0.932432
56 ADP PO3 0.662651 0.943662
57 ADV 0.662651 0.932432
58 BIS 0.659341 0.933333
59 8QN 0.659091 0.931507
60 5SV 0.659091 0.848101
61 OOB 0.659091 0.931507
62 GTA 0.65625 0.886076
63 UP5 0.653061 0.92
64 AMO 0.651685 0.932432
65 PAJ 0.651685 0.884615
66 2A5 0.650602 0.918919
67 MAP 0.647727 0.945946
68 3AT 0.647059 0.971831
69 AHX 0.644444 0.896104
70 DLL 0.644444 0.931507
71 ATR 0.642857 0.971429
72 PAP 0.642857 0.985714
73 PTJ 0.641304 0.896104
74 7D3 0.6375 0.905405
75 3UK 0.637363 0.918919
76 SON 0.634146 0.932432
77 A4P 0.633663 0.843373
78 ALF ADP 0.632184 0.87013
79 ADP ALF 0.632184 0.87013
80 PR8 0.630435 0.85
81 WAQ 0.630435 0.883117
82 LAD 0.630435 0.860759
83 B5V 0.630435 0.906667
84 AFH 0.628866 0.884615
85 LMS 0.628205 0.82716
86 GAP 0.627907 0.893333
87 DTP 0.627907 0.905405
88 VO4 ADP 0.625 0.931507
89 ADP VO4 0.625 0.931507
90 TXA 0.623656 0.932432
91 ME8 0.623656 0.839506
92 1ZZ 0.623656 0.839506
93 NB8 0.623656 0.896104
94 FYA 0.623656 0.905405
95 DQV 0.622449 0.958333
96 T5A 0.621359 0.841463
97 ADN 0.619718 0.84507
98 RAB 0.619718 0.84507
99 XYA 0.619718 0.84507
100 DAL AMP 0.611111 0.905405
101 9SN 0.610526 0.871795
102 48N 0.61 0.896104
103 AP0 0.607843 0.896104
104 9ZD 0.604396 0.907895
105 9ZA 0.604396 0.907895
106 FA5 0.604167 0.906667
107 B5M 0.604167 0.894737
108 YAP 0.604167 0.894737
109 B5Y 0.604167 0.894737
110 NAI 0.60396 0.907895
111 6V0 0.60396 0.896104
112 TXD 0.60396 0.907895
113 DND 0.60396 0.932432
114 NXX 0.60396 0.932432
115 NAX 0.60396 0.873418
116 ADP BMA 0.602151 0.918919
117 A2R 0.6 0.985915
118 OMR 0.598039 0.851852
119 TXE 0.598039 0.907895
120 XAH 0.597938 0.839506
121 7DT 0.593023 0.985714
122 AOC 0.592593 0.821918
123 4UV 0.591837 0.894737
124 DDS 0.590909 0.878378
125 139 0.590476 0.873418
126 CNA 0.584906 0.932432
127 6AD 0.58427 0.909091
128 5AS 0.583333 0.77907
129 5N5 0.581081 0.819444
130 GA7 0.58 0.906667
131 4UU 0.58 0.894737
132 4TC 0.576923 0.896104
133 ADJ 0.575472 0.851852
134 5CD 0.573333 0.805556
135 A4D 0.573333 0.819444
136 RGT 0.571429 0.958904
137 A3P 0.571429 0.971429
138 7D5 0.56962 0.878378
139 LAQ 0.568627 0.839506
140 F2R 0.564815 0.864198
141 80F 0.563636 0.841463
142 YLP 0.563107 0.819277
143 A A 0.5625 0.944444
144 UPA 0.561905 0.907895
145 AV2 0.56044 0.917808
146 COD 0.559633 0.811765
147 4UW 0.557692 0.860759
148 JB6 0.556701 0.883117
149 3AM 0.555556 0.929577
150 ATP A A A 0.555556 0.930556
151 A2P 0.552941 0.957143
152 TYM 0.552381 0.906667
153 NA7 0.552083 0.958904
154 EP4 0.551282 0.753247
155 MYR AMP 0.55102 0.817073
156 PPS 0.549451 0.873418
157 YLC 0.54717 0.839506
158 YLB 0.54717 0.819277
159 NAD 0.545455 0.931507
160 DAT 0.545455 0.905405
161 TYR AMP 0.544554 0.87013
162 G5A 0.544444 0.77907
163 M2T 0.544304 0.734177
164 DTA 0.544304 0.786667
165 3DH 0.54321 0.773333
166 128 0.542857 0.776471
167 AHZ 0.538462 0.817073
168 GTP 0.537634 0.92
169 SSA 0.537634 0.8
170 MTA 0.5375 0.773333
171 IOT 0.537037 0.831325
172 A3D 0.535714 0.918919
173 ARG AMP 0.533981 0.829268
174 7MD 0.533981 0.8625
175 AR6 AR6 0.533981 0.917808
176 YLA 0.53211 0.819277
177 AMP DBH 0.529412 0.893333
178 IMO 0.529412 0.929577
179 TAD 0.528846 0.884615
180 AYB 0.527273 0.809524
181 A5A 0.526882 0.807229
182 HDV 0.526882 0.893333
183 TSB 0.526316 0.819277
184 EAD 0.525424 0.873418
185 2AM 0.52439 0.943662
186 6RE 0.52381 0.759494
187 7DD 0.522727 0.985714
188 V3L 0.521739 0.971831
189 AVV 0.520833 0.896104
190 BTX 0.517857 0.841463
191 NAE 0.517241 0.894737
192 52H 0.515789 0.77907
193 54H 0.515789 0.788235
194 VMS 0.515789 0.788235
195 NSS 0.515464 0.8
196 BT5 0.513274 0.831325
197 NAQ 0.512821 0.871795
198 ZAS 0.511905 0.766234
199 J7C 0.511628 0.769231
200 A3N 0.511628 0.786667
201 5X8 0.511111 0.763158
202 53H 0.510417 0.77907
203 8X1 0.510417 0.752809
204 5CA 0.510417 0.8
205 NVA LMS 0.510204 0.752809
206 ARU 0.510204 0.860759
207 AF3 ADP 3PG 0.509259 0.8375
208 ZID 0.508475 0.918919
209 P1H 0.508197 0.851852
210 OVE 0.505882 0.905405
211 S4M 0.505747 0.666667
212 LEU LMS 0.50505 0.752809
213 LPA AMP 0.504673 0.817073
214 7MC 0.504587 0.841463
215 DZD 0.5 0.884615
216 FB0 0.5 0.804598
217 MAO 0.5 0.759036
218 DSZ 0.5 0.8
219 LSS 0.5 0.761364
220 DSH 0.5 0.725
221 P5A 0.5 0.744444
222 NDE 0.495935 0.932432
223 N0B 0.495798 0.819277
224 M24 0.495726 0.85
225 YLY 0.495726 0.809524
226 NJP 0.495575 0.945946
227 9K8 0.49505 0.714286
228 MGP 0.494737 0.884615
229 6C6 0.494624 0.881579
230 NAJ PZO 0.491379 0.848101
231 0WD 0.491228 0.921053
232 6G0 0.489583 0.884615
233 GJV 0.488636 0.75
234 6FA 0.488189 0.841463
235 5AD 0.486842 0.746479
236 KAA 0.485149 0.752809
237 GSU 0.485149 0.77907
238 71V 0.483146 0.907895
239 NEC 0.482759 0.746667
240 A3G 0.482759 0.8
241 ODP 0.482456 0.909091
242 FAS 0.48062 0.851852
243 FAD 0.48062 0.851852
244 7D7 0.480519 0.743243
245 FDA 0.480315 0.833333
246 N6P 0.48 0.915493
247 2SA 0.479167 0.932432
248 GP3 0.478723 0.921053
249 4TA 0.478261 0.807229
250 SFG 0.478261 0.75
251 G A A A 0.478261 0.871795
252 AMP NAD 0.478261 0.905405
253 NPW 0.477876 0.886076
254 NDP 0.477876 0.921053
255 NDC 0.47619 0.871795
256 YSA 0.47619 0.77907
257 NAJ PYZ 0.475 0.807229
258 MGO 0.474227 0.860759
259 GDP 0.473684 0.92
260 NZQ 0.473684 0.909091
261 TXP 0.473684 0.921053
262 6IA 0.473684 0.8375
263 A7D 0.472527 0.776316
264 SFD 0.469231 0.734043
265 A5D 0.468085 0.786667
266 SA8 0.468085 0.707317
267 ZDA 0.468085 0.864865
268 12D 0.46789 0.785714
269 PGS 0.467391 0.883117
270 MHZ 0.467391 0.697674
271 8PZ 0.466667 0.8
272 62F 0.466165 0.8625
273 DA 0.465909 0.878378
274 D5M 0.465909 0.878378
275 GGZ 0.464646 0.825
276 SAH 0.463158 0.74359
277 SAI 0.463158 0.734177
278 FAY 0.462687 0.8625
279 Y3J 0.4625 0.726027
280 PO4 PO4 A A A A PO4 0.460784 0.902778
281 AAM 0.460674 0.971429
282 RFL 0.459259 0.821429
283 SMM 0.459184 0.686047
284 HF7 0.459184 0.893333
285 AMZ 0.458824 0.916667
286 C2R 0.458824 0.90411
287 SAM 0.458333 0.690476
288 A3S 0.456522 0.810811
289 FNK 0.455224 0.804598
290 U A 0.453782 0.907895
291 7C5 0.453704 0.818182
292 EEM 0.453608 0.690476
293 AAT 0.453608 0.707317
294 XNP 0.452991 0.873418
295 A G 0.452991 0.883117
296 PRT 0.45283 0.931507
297 AIR 0.451219 0.901408
298 62X 0.45098 0.666667
299 DCA 0.45 0.823529
300 ETB 0.45 0.833333
301 GSP 0.45 0.873418
302 U A G G 0.449153 0.883117
303 NIA 0.448276 0.822785
304 A3T 0.446809 0.821918
305 A A A 0.446602 0.905405
306 K15 0.446602 0.682353
307 PUA 0.446281 0.884615
308 6K6 0.445545 0.930556
309 GEK 0.445545 0.7375
310 4YB 0.445455 0.761364
311 S7M 0.444444 0.690476
312 Z5A 0.443548 0.77907
313 1DG 0.443548 0.921053
314 DG1 0.443548 0.921053
315 0T1 0.442623 0.823529
316 COA 0.442623 0.823529
317 WSA 0.442478 0.788235
318 8BR 0.43956 0.906667
319 8Q2 0.438596 0.772727
320 101 0.438202 0.878378
321 IDP 0.4375 0.918919
322 NVA 2AD 0.4375 0.759494
323 9JJ 0.435714 0.8625
324 NAP 0.435484 0.945205
325 APU 0.434783 0.894737
326 A U 0.434783 0.87013
327 7RP 0.433333 0.928571
328 A6D 0.432692 0.722892
329 AMX 0.432 0.833333
330 J7V 0.432 0.833333
331 TAP 0.432 0.907895
332 COS 0.432 0.804598
333 CAO 0.432 0.795455
334 30N 0.432 0.752688
335 V1N 0.431193 0.917808
336 649 0.429825 0.744444
337 P5F 0.429577 0.823529
338 NA0 0.428571 0.932432
339 SCO 0.428571 0.823529
340 CMX 0.428571 0.823529
341 7RA 0.428571 0.957747
342 0UM 0.427184 0.698795
343 GAV 0.427184 0.884615
344 QQY 0.426966 0.815789
345 1RB 0.426966 0.885714
346 ACK 0.426966 0.861111
347 G1R 0.425743 0.907895
348 GCP 0.425743 0.896104
349 FAM 0.425197 0.804598
350 FCX 0.425197 0.795455
351 ACO 0.425197 0.795455
352 GNH 0.424242 0.907895
353 F2N 0.423611 0.813953
354 GKE 0.422018 0.884615
355 GDD 0.422018 0.884615
356 GDC 0.422018 0.884615
357 HAX 0.421875 0.804598
358 3AD 0.421687 0.805556
359 9GM 0.421569 0.896104
360 GNP 0.421569 0.896104
361 FA9 0.42069 0.864198
362 TM1 0.420561 0.77381
363 KB1 0.420561 0.698795
364 H6Y 0.42 0.945205
365 2MC 0.419847 0.769231
366 3KK 0.418605 0.804598
367 FYN 0.418605 0.823529
368 S8M 0.417476 0.759494
369 7L1 0.417323 0.795455
370 2VA 0.416667 0.8
371 26A 0.416667 0.763158
372 NHD 0.416667 0.905405
373 QQX 0.41573 0.805195
374 CA6 0.415385 0.729167
375 OXK 0.415385 0.804598
376 COK 0.415385 0.804598
377 SOP 0.415385 0.804598
378 MCD 0.415385 0.804598
379 YE1 0.413534 0.813953
380 RMB 0.413043 0.873239
381 FAI 0.413043 0.916667
382 AS 0.413043 0.833333
383 CO6 0.412214 0.804598
384 1VU 0.412214 0.795455
385 CMC 0.412214 0.804598
386 NMX 0.412214 0.76087
387 SXZ 0.411215 0.710843
388 ANZ 0.410714 0.8
389 SCA 0.410448 0.804598
390 CAJ 0.409091 0.804598
391 SCD 0.409091 0.823529
392 EO7 0.408602 0.788235
393 D3Y 0.407767 0.789474
394 CC5 0.407407 0.816901
395 KH3 0.40708 0.674419
396 A C A C 0.406504 0.848101
397 SLU 0.406504 0.770115
398 G 0.40625 0.906667
399 5GP 0.40625 0.906667
400 A1S 0.406015 0.804598
401 IVC 0.406015 0.813953
402 MLC 0.406015 0.804598
403 3HC 0.406015 0.813953
404 1HE 0.406015 0.786517
405 BCO 0.406015 0.804598
406 GTG 0.405405 0.886076
407 NMN AMP PO4 0.404959 0.87013
408 3D1 0.404762 0.773333
409 3L1 0.404762 0.773333
410 2BA 0.404255 0.915493
411 CMP 0.404255 0.901408
412 VRT 0.40404 0.769231
413 SO8 0.40404 0.789474
414 MCA 0.402985 0.795455
415 COO 0.402985 0.804598
416 CAA 0.402985 0.813953
417 3NZ 0.401869 0.782051
418 G2R 0.401869 0.884615
419 ZZB 0.4 0.77381
420 2FA 0.4 0.813333
421 MC4 0.4 0.76087
422 2CP 0.4 0.795455
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4OI4; Ligand: ATP; Similar sites found with APoc: 663
This union binding pocket(no: 1) in the query (biounit: 4oi4.bio2) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 5O2Z FLC None
2 2Q2Y ADP 1.90736
3 2Q2Y MKR 1.90736
4 5K5Z ANP 2.6087
5 4IDN GNP 2.6087
6 1KK1 GNP 2.68293
7 1WDT GTP 2.86976
8 3UIE ANP 3
9 5X40 ACP 3.08219
10 2CE7 ADP 3.09051
11 1WF3 GNP 3.32226
12 3T34 GDP 3.33333
13 2PEZ DAT 3.35196
14 2PEZ GGZ 3.35196
15 5W76 GDP 3.47826
16 5W75 GDP 3.47826
17 5VGR GDP 3.47826
18 4YJ1 ADP 3.47826
19 3TBK ANP 3.47826
20 1DAK ADP 3.47826
21 1DAK DPU 3.47826
22 2FSH ANP 3.47826
23 2ZX2 RAM 3.47826
24 4YS0 ADP 3.47826
25 1K6M AGS 3.47826
26 4BAS GNP 3.51759
27 5KSZ GCP 3.53201
28 4TL6 ANP 3.55731
29 1SQ5 ADP 3.57143
30 3WY9 GDP 3.68664
31 3WYA GDP 3.68664
32 2ZPT A3P 3.72881
33 2ZPA ADP 3.75276
34 2YOH WMJ 3.80952
35 2RCN GDP 3.91061
36 3FKQ ATP 4.02145
37 4QOS ADP 4.15094
38 3FB4 AP5 4.16667
39 3TMK T5A 4.16667
40 2ORV 4TA 4.2735
41 2XT3 ADP 4.34783
42 2QN6 GDP 4.34783
43 5FG3 GDP 4.34783
44 4MKF AP5 4.34783
45 2C9O ADP 4.34783
46 4U5X GNP 4.34783
47 4RD0 GDP 4.34783
48 1FNN ADP 4.34783
49 4WEI GLC GAL 4.34783
50 2FNA ADP 4.34783
51 1IN4 ADP 4.34783
52 1UKZ ADP 4.34783
53 4NON GDP 4.34783
54 3QVV A3P 4.34783
55 4ZKD GDP 4.34783
56 2GKS ADP 4.41501
57 1FZQ GDP 4.41989
58 4ZI2 GNP 4.51128
59 5J1J ANP 4.5614
60 3Q9L ATP 4.61538
61 4Q1A UDP 4.64286
62 4Q1A 2XZ 4.64286
63 4TQK NAG 4.6798
64 1A4R GNH 4.71204
65 1A4R GDP 4.71204
66 1GRN GDP 4.71204
67 1YVD GNP 4.73373
68 4PX9 ADP 4.79452
69 1NJF AGS 4.8
70 1NJF ADP 4.8
71 4WOP CTP 4.88889
72 2QQ0 THM 4.8913
73 2QQ0 ANP 4.8913
74 2QQ0 ADP 4.8913
75 2QQ0 TMP 4.8913
76 2GCO GNP 4.97512
77 2GCN GDP 4.97512
78 1W4R TTP 5.12821
79 1QF9 ADP 5.15464
80 1QF9 C5P 5.15464
81 1QF9 ALF 5.15464
82 5XQL C2E 5.15464
83 1F9V ADP 5.21739
84 1OXV ANP 5.21739
85 2OBM ADP 5.21739
86 2DPY ADP 5.21739
87 1W5T ADP 5.21739
88 5NM7 GLY 5.21739
89 1ION ADP 5.21739
90 4PFO ADP 5.21739
91 2VB6 ADP BEF 5.21739
92 1G41 ADP 5.21739
93 4V03 ADP 5.21739
94 6AU6 GDP 5.21739
95 1W5T ANP 5.21739
96 2HF9 GSP 5.21739
97 1VKJ A3P 5.21739
98 6AIC AMP 5.21739
99 5L3W GDP 5.22876
100 5KSP GDP 5.26316
101 4DID GDP 5.26316
102 3FVQ ATP 5.29248
103 5M7P ADP 5.29801
104 2CHG ANP 5.30973
105 1KSH GDP 5.37634
106 3Q72 GNP 5.42169
107 1V6A TRE 5.42169
108 4UXH T5A 5.43478
109 1PU7 39A 5.50459
110 1WUU GLA 5.51378
111 1F6B GDP 5.55556
112 5Z69 AGS 5.64516
113 3DZD ADP 5.70652
114 2ZTS ADP 5.73951
115 1VG8 GNP 5.7971
116 1BO4 COA 5.95238
117 5LTJ ADP 5.96026
118 5LTJ BEF 5.96026
119 5FPN KYD 5.96026
120 2CDN ADP 5.97015
121 2EW1 GNP 5.97015
122 5OEC GDP 6.01093
123 3KTA AP5 6.04396
124 1XEX ATP 6.04396
125 1LVG ADP 6.06061
126 3T5G GDP 6.07735
127 1GOJ ADP 6.08696
128 3COB ADP 6.08696
129 6A20 ADP 6.08696
130 3U6B GDP 6.08696
131 5ZXD ATP 6.08696
132 2ZR9 DTP 6.08696
133 3U6K GDP 6.08696
134 5ZBR ANP 6.08696
135 4LPS GDP 6.08696
136 2J0V GDP 6.08696
137 4LYA ATP 6.08696
138 5JCP GDP ALF 6.08696
139 1D2N ANP 6.08696
140 3VMF GTP 6.08696
141 1OW3 GDP 6.08696
142 1LVK MNT BEF 6.08696
143 5HPY GDP 6.08696
144 4A4Z ANP 6.08696
145 2BEK ATP 6.08696
146 3WXM GTP 6.08696
147 4H1V GNP 6.08696
148 1NF3 GNP 6.08696
149 6BCA GSP 6.08696
150 4R2I ANP 6.08696
151 1TX4 ALF GDP 6.08696
152 5AK0 8V1 6.08696
153 1KMQ GNP 6.08696
154 6H5E ANP 6.08696
155 6BC0 GSP 6.08696
156 4BFW ZVW 6.08696
157 4G5G GDP 6.08696
158 5L2R MLA 6.08696
159 2Z5F A3P 6.08696
160 2CJW GDP 6.25
161 2WMO GTP 6.31579
162 1GWN GTP 6.34146
163 2PL3 ADP 6.35593
164 5UPK GNP 6.35838
165 4YLG GDP 6.35838
166 3TK1 GDP 6.36364
167 2A9K GDP 6.41711
168 1VG1 GDP 6.48649
169 3ITJ CIT 6.50888
170 3B7G ANP 6.52174
171 1KY3 GDP 6.59341
172 3WYG GTP 6.59341
173 5Y6N ADP 6.621
174 5CK5 GDP 6.64557
175 2OFW ADX 6.73077
176 1ZC3 GNP 6.85714
177 5BQ5 ADP BEF 6.87831
178 2HT6 GDP 6.89655
179 6FA4 GNP 6.93642
180 1T5C ADP 6.95652
181 1SKQ GDP 6.95652
182 1V8K ANP 6.95652
183 5JBQ GDP 6.95652
184 1D8T GDP 6.95652
185 5TSH ANP 6.95652
186 5TSH ADP 6.95652
187 2BVN GNP 6.95652
188 5BN3 ADP 6.95652
189 6B4K ANP 6.95652
190 4KBF AMP 6.95652
191 1ZIN AP5 6.95652
192 4TMZ GSP 6.95652
193 4NCN GTP 6.95652
194 4ZNL BEF ADP 6.95652
195 3REF GDP 6.95652
196 3KC1 2T6 6.95652
197 3QKT ANP 6.95652
198 1F5N GNP 6.95652
199 3E70 GDP 6.95652
200 1OS1 PYR 6.95652
201 1OS1 ATP 6.95652
202 2JJK R15 6.95652
203 5H4S RAM 6.95652
204 2GDJ ANP 6.95652
205 1C3X 8IG 6.95652
206 1HTW ADP 6.96203
207 5FPE 3TR 6.97674
208 1M7B GTP 7.06522
209 4V0K GDP 7.10059
210 5GOE GDP 7.109
211 1KAO GDP 7.18563
212 3NHB ADP 7.18954
213 1VMK GUN 7.22022
214 1CLU DBG 7.22892
215 3KUD GDP 7.22892
216 1WQ1 GDP 7.22892
217 4ZDJ UTP 7.28477
218 6BSX E7S 7.30337
219 6BSX GDP 7.30337
220 2WJG GDP 7.44681
221 5N69 ADP 7.53769
222 1CS4 GSP 7.55556
223 5ZB0 ADP 7.57576
224 5ZB0 TYD 7.57576
225 1M7G AV2 7.58294
226 1M7G ADX 7.58294
227 1M7G ADP 7.58294
228 2ZEJ GDP 7.6087
229 1B0U ATP 7.63359
230 1Z83 AP5 7.65306
231 5GVR LMR 7.69231
232 3K0T BGC 7.69231
233 1G6H ADP 7.7821
234 3W5J GDP 7.82609
235 2Y65 ADP 7.82609
236 5U32 GDP 7.82609
237 1RE0 GDP 7.82609
238 2D2F ADP 7.82609
239 2X77 GDP 7.82609
240 4AG5 ADP 7.82609
241 2ZFI ADP 7.82609
242 3MD0 GDP 7.82609
243 1XP8 AGS 7.82609
244 3P4X ADP 7.82609
245 5LB3 ADP 7.82609
246 2C77 GNP 7.82609
247 4PC3 GDP 7.82609
248 3KJI ADP 7.82609
249 2C78 GNP 7.82609
250 2XTZ GSP 7.82609
251 5O2T GSP 7.82609
252 3BOS CDP 7.82609
253 3M1I GTP 7.82609
254 1Z06 GNP 7.82609
255 2J59 GTP 7.82609
256 1O3Y GTP 7.82609
257 3WYF GTP 7.82609
258 1QHG ATP 7.82609
259 5WDR GNP 7.82609
260 4IOK ADP 7.82609
261 3QXC ATP 7.82609
262 5H68 AGS 7.82609
263 4GN8 ASO 7.82609
264 4IEE AGS 7.82609
265 1D2E GDP 7.82609
266 4IOK XPO 7.82609
267 1S9D GDP 7.82609
268 2UZI GTP 7.89474
269 1JI0 ATP 7.91667
270 5KUT GDP 7.93651
271 4BQS K2Q 7.95455
272 4BQS ADP 7.95455
273 1ZJ6 G3D 8.02139
274 1CXZ GSP 8.13953
275 4K81 GTP 8.18713
276 3Q85 GNP 8.28402
277 1RYH GNP 8.37438
278 2WJH FLC 8.43373
279 2WJH GDP 8.43373
280 2Q8M AMP 8.43373
281 2AWN ADP 8.66142
282 4PPF FLC 8.69565
283 5YV5 ADP 8.69565
284 3GJ7 GDP 8.69565
285 3EWA ANP 8.69565
286 1VHT BA3 8.69565
287 1AKY AP5 8.69565
288 3RC3 ANP 8.69565
289 5IRR GSP 8.69565
290 5XDR ADP 8.69565
291 2XAU ADP 8.69565
292 6D5H GNP 8.69565
293 5VHC BEF ADP 8.69565
294 6BVJ GNP 8.69565
295 6BVK GNP 8.69565
296 1IHU AF3 8.69565
297 6D5G GNP 8.69565
298 6D5J GNP 8.69565
299 6D5E GNP 8.69565
300 4LX0 BEF GDP 8.69565
301 5EE5 GTP 8.69565
302 1OIV GDP 8.69565
303 1IHU ADP 8.69565
304 5JCZ GDP 8.69565
305 1DAR GDP 8.69565
306 1OIX GDP 8.69565
307 6BVM GNP 8.69565
308 6BVL GNP 8.69565
309 6BVI GNP 8.69565
310 6D59 GNP 8.69565
311 6D56 GNP 8.69565
312 4HSE ADP 8.69565
313 2F9L GDP 8.69565
314 6D5L GNP 8.69565
315 2X7I CIT 8.69565
316 1U8Z GDP 8.69565
317 6D55 GNP 8.69565
318 1GXU 2HP 8.79121
319 1Z08 GNP 8.82353
320 1JJ7 ADP 8.84615
321 1I4D GDP 8.85417
322 1E96 GTP 8.85417
323 2IXE ATP 8.85609
324 2FH5 GTP 8.8785
325 3A1S GDP 8.91473
326 1M2O GNP 8.94737
327 3DKP ADP 8.97959
328 2WOJ ADP ALF 9.03955
329 3ZS9 ADP ALF 9.03955
330 1MH1 GNP 9.13978
331 2W2X GSP 9.18919
332 1OFH ADP 9.1954
333 4LC1 GDP 9.19881
334 4DKX GDP 9.25926
335 1D5C GDP 9.25926
336 1L2T ATP 9.3617
337 2QG6 NMN 9.54774
338 2FJU GSP 9.55056
339 1BG2 ADP 9.56522
340 2VVG ADP 9.56522
341 2OG2 MLI 9.56522
342 4YDS ATP 9.56522
343 3B9Q MLI 9.56522
344 1TAD ALF 9.56522
345 1TAD GDP 9.56522
346 3CPJ GDP 9.56522
347 1OYY AGS 9.56522
348 1W7J ADP BEF 9.56522
349 4XOI GTP 9.56522
350 2B8W ALF 5GP 9.56522
351 3A16 PXO 9.56522
352 4HI0 GDP 9.56522
353 3HQP FDP 9.56522
354 1HE1 GDP 9.65909
355 6FAA ADP 9.71302
356 2EFE GNH 9.73783
357 3EC1 GDP 9.7561
358 2J5V PCA 9.80926
359 3DC4 ADP 9.88372
360 4CVN ADP 9.94764
361 1XX6 ADP 9.94764
362 3BFV ADP 9.9631
363 6DEF GCP 9.97442
364 3A4M ADP 10
365 4GOJ GNP 10
366 5H67 ATP 10
367 2NCD ADP 10
368 1UAD GNP 10.101
369 1ZUI SKM 10.119
370 5Z2M GTP 10.1449
371 2C5L GTP 10.2564
372 2NGR GDP 10.2564
373 4C4P GNP 10.2804
374 3B5J 12D 10.2881
375 5E95 GDP 10.3093
376 1U0J ADP 10.4348
377 4D0N GDP 10.4348
378 5L3S GNP 10.4348
379 1NRJ GTP 10.4348
380 3EZ2 ADP 10.4348
381 5L3V GDP 10.4348
382 1ZD9 GDP 10.4348
383 1CR1 TTP 10.4348
384 2GJ8 ALF GDP 10.4348
385 3IO3 ADP 10.4348
386 4YC7 GNP 10.4348
387 1YZG GDP 10.4348
388 6B8B ADP 10.4418
389 4NU0 AP5 10.5991
390 1Z0F GDP 10.6145
391 4U00 ADP 10.6557
392 2QZ4 ADP 10.687
393 4KVG GTP 10.7143
394 4HDO GNP 10.7784
395 1GUA GNP 10.7784
396 3X1Z GNP 10.7784
397 2HCJ GDP 10.8108
398 4D0G GTP 10.8571
399 3DOE GTP 10.9375
400 2CBZ ATP 10.9705
401 5EXT ADP 11.2583
402 5L3R GCP 11.2957
403 2PZE ATP 11.3043
404 1R0X ATP 11.3043
405 2IS6 ADP 11.3043
406 3ZFD ANP 11.3043
407 1W0J ADP 11.3043
408 5I0H ADP BEF 11.3043
409 4FCW ADP 11.3043
410 4LJ9 ACP 11.3043
411 4XVU ATP 11.3043
412 4XTR ATP 11.3043
413 1W0J ADP BEF 11.3043
414 3DEF GDP 11.3043
415 4PJ3 ANP 11.3043
416 2BCG GDP 11.3043
417 3TUR DGL 11.3043
418 1QHH ATP 11.3043
419 4XTR ADP 11.3043
420 5LV1 78T 11.3043
421 5J1S ATP 11.3043
422 3TUR 6CL 11.3043
423 4WZ6 ATP 11.3043
424 1YZN GNP 11.3043
425 1YQT ADP 11.479
426 1H65 GDP 11.4815
427 4E03 ADP 11.6505
428 2UVO NAG 11.6959
429 2UVO NDG 11.6959
430 3PCR GTP 11.7284
431 1YZQ GNP 11.7647
432 1G3M A3P 11.9048
433 1G3M PCQ 11.9048
434 1XKV ATP 11.9205
435 3AQ4 GDP 11.9565
436 1Y63 ADP 11.9565
437 3T12 GDP ALF 12.1212
438 3T1O GDP 12.1212
439 4DDY DN6 12.1673
440 2G77 GDP 12.1739
441 1UJ2 ADP 12.1739
442 1FP6 ADP 12.1739
443 1UJ2 C5P 12.1739
444 2QEN ADP 12.1739
445 3FWY ADP 12.1739
446 2G77 AF3 12.1739
447 2FAH GDP 12.1739
448 1SVM ATP 12.1739
449 1Z0K GTP 12.1739
450 1PVS 7HP 12.1739
451 5M04 GDP 12.1739
452 1R6B ADP 12.1739
453 5IRN ADP 12.1739
454 5MB4 NAG 12.1739
455 2BME GNP 12.1739
456 4B47 GDP 12.1739
457 1MKY GDP 12.3007
458 4KAX GTP 12.426
459 3RAB GNP 12.426
460 1XPJ TLA 12.6984
461 2W83 GTP 12.7273
462 4XSH GSP 12.7854
463 3RLF ANP 12.8378
464 3N5C GDP 12.963
465 6BCB GSP 13.0137
466 3LXR GDP 13.0208
467 4DCT GDP 13.0435
468 4XGU ADP 13.0435
469 4MKG AP5 13.0435
470 4ZG4 VO4 ADP 13.0435
471 6C90 ADP 13.0435
472 3TNF GNP 13.0435
473 1G16 GDP 13.0435
474 4LHW GNP 13.0435
475 3QBT GNP 13.0435
476 4RZ3 ADP 13.0435
477 5XC5 GTP 13.0435
478 4D81 ADP 13.0742
479 3IUY AMP 13.1579
480 1UPT GTP 13.3333
481 3SBD GNP 13.369
482 4TTQ ATP 13.4884
483 5XKT GNP 13.5
484 5MVR ADP 13.5802
485 2RGX AP5 13.5922
486 2IYL GDP 13.7324
487 1G7C 5GP 13.8298
488 3IIJ ADP 13.8889
489 2W58 ADP 13.913
490 3LRE ADP 13.913
491 4J0Q GDP 13.913
492 5W7Q GDP 13.913
493 4IHQ ADP 13.913
494 2CK3 ANP 13.913
495 4R43 GDP 13.913
496 2V7Q ATP 13.913
497 2CK3 ADP 13.913
498 4ITR GDP 13.913
499 2V7Q ADP 13.913
500 2O0J ADP 13.913
501 5MEX SZZ 13.913
502 1G4U GDP 13.913
503 1TQ4 GDP 13.913
504 1T8U UAP SGN IDS SGN 13.913
505 3SFV GDP 13.913
506 3AB3 GDP 14.0884
507 1ZCB GDP 14.0884
508 1S8F GDP 14.1243
509 3GJ8 GDP 14.1304
510 6AR9 3L4 14.3382
511 5WLB GNP 14.7059
512 3PQC GDP 14.7826
513 4KVA GTP 14.7826
514 1JJV ATP 15.0485
515 3GJ4 GDP 15.1515
516 3E5H GNP 15.1685
517 5OCG GNP 15.3439
518 1F2U ATP 15.4362
519 1J2J GTP 15.5556
520 4KFU ACP 15.566
521 1VG9 GDP 15.6522
522 5MZN ADP 15.6522
523 1VG0 GDP 15.6522
524 5G41 AP5 15.6522
525 5KDO GDP 15.6522
526 3BER AMP 15.6522
527 6EGU 43Y 15.6522
528 3DDC GNP 15.6522
529 5TB5 GDP 15.6757
530 5TAR GDP 15.6757
531 5UIV ADP 15.859
532 3QF7 ANP 16
533 3CX8 GSP 16.2722
534 2QTV GNP 16.3265
535 6G14 G4P 16.5217
536 4NE2 SH2 16.5217
537 4NE2 ADP 16.5217
538 1YTM ATP 16.5217
539 5G3Y ADP 16.5217
540 1MR3 G3D 16.5217
541 1X6V ADP 16.5217
542 2HCR AMP 16.5563
543 5UQW GDP 16.9312
544 1Z0J GTP 16.9492
545 2HV8 GTP 17.1875
546 1DS6 GDP 17.2222
547 3GJ0 GDP 17.3913
548 5BXQ GDP 17.3913
549 3CH5 GDP 17.3913
550 5O74 GDP 17.3913
551 1WA5 GTP 17.3913
552 5UWH GNP 17.3913
553 4HAT GNP 17.3913
554 5UWQ GNP 17.3913
555 5UWO GNP 17.3913
556 5DHF GNP 17.3913
557 5UWP GNP 17.3913
558 6CIT GNP 17.3913
559 5UWS GNP 17.3913
560 5DI9 GNP 17.3913
561 5UWJ GNP 17.3913
562 3GJX GTP 17.3913
563 3NKV GNP 17.3913
564 1Z2A GDP 17.3913
565 5UWR GNP 17.3913
566 5DIF GNP 17.3913
567 5UWI GNP 17.3913
568 5UWW GNP 17.3913
569 6D5V GNP 17.9641
570 6D5M GNP 17.9641
571 1NVV GNP 18.0723
572 2KIN ADP 18.2609
573 4P3Y GDP 18.2609
574 5H7K GDP 18.2609
575 5H7J GCP 18.2609
576 1S3G AP5 18.2609
577 2OZE AGS 18.2609
578 3TKL GTP 18.2609
579 4P4T GDP 18.2609
580 2BIF ANP 18.2609
581 2BIF SIN 18.2609
582 3RWO GDP 18.2609
583 5SZH GNP 18.2609
584 2A5J GDP 18.3246
585 1G3Q ADP 18.5654
586 3CNL GNP 19.1304
587 1BH2 GSP 19.1304
588 1FQJ GDP 19.1304
589 1FQK GDP 19.1304
590 1FQJ ALF 19.1304
591 1FQK ALF 19.1304
592 1GOT GDP 19.1304
593 2A5F GTP 19.1304
594 2ODE ALF GDP 19.1304
595 1IBR GNP 19.1304
596 4HDQ GNP 19.2308
597 2VOH CIT 19.2308
598 1TU3 GNP 19.2982
599 1R2Q GNP 19.4118
600 3MJH GTP 19.6429
601 1Z6T ADP 19.8675
602 2D7D ADP 20
603 4X8O AP5 20
604 1PUJ GNP 20
605 1G7S GDP 20
606 1Z0A GDP 20.1149
607 1NY5 ADP 20.155
608 1YRB GDP 20.229
609 4R98 GNH 20.2952
610 2XTN GTP 20.5128
611 3GJ5 GDP 20.5882
612 3ZIA ADP 20.6349
613 3ZIA ATP 20.6349
614 2Y8E GNP 20.6704
615 1LFD GNP 20.6897
616 1G6O ADP 20.8696
617 4JLV ADP 20.8696
618 1SVK ALF GDP 20.8696
619 2OM2 GDP 20.8696
620 1EK0 GNP 20.8696
621 6CRK GDP 20.8696
622 1Y3A GDP 20.8696
623 1GP2 GDP 20.8696
624 1NN5 ANP 20.9302
625 1NN5 2DT 20.9302
626 2FFQ GSP 21.6374
627 5IFS ADP 21.7391
628 3HU3 AGS 21.7391
629 5IRC GDP 21.8905
630 3BC1 GNP 22.0339
631 1SVI GDP 22.0513
632 2C3W GLC GLC GLC GLC 22.549
633 2GK6 ADP 22.6087
634 5HCN GCP 22.9885
635 3H4S ADP 23.4783
636 1XMV ADP 23.4783
637 4FRZ ADP 23.4783
638 1RJ9 GCP 24
639 3GJ3 GDP 24.2424
640 5DI3 GNP 24.3478
641 4M9Q GNP 24.3478
642 1B7T ADP 24.359
643 1KK8 BEF ADP 25.1799
644 5WC2 ADP 25.2174
645 4WZA ACP 25.2174
646 4WZA ADP 25.2174
647 3MBI HSX 25.2174
648 1R4A GNP 25.4902
649 1KO8 6PG 25.7143
650 5UWT GNP 26.087
651 2D7C GTP 26.1905
652 2WKQ GTP 26.9565
653 2WIC GNP 27.3408
654 5FTB ANP 27.8261
655 5FHD ADP ALF 27.8261
656 5YT0 GDP 28.5714
657 3ZQ6 ADP ALF 28.6957
658 2JLR ANP 28.6957
659 3HSS MLA 29.5652
660 4YMU ATP 31.3043
661 5HR5 ADP 36.5217
662 5LEF GTP 39.3939
663 4OHY ANP 48.7239
Pocket No.: 2; Query (leader) PDB : 4OI4; Ligand: ATP; Similar sites found with APoc: 11
This union binding pocket(no: 2) in the query (biounit: 4oi4.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 3N8K D1X 2.32558
2 5LFV SIA GAL NAG 3.78549
3 4UP4 GAL NAG 4.34783
4 4C12 ADP 6.08696
5 6C0B PAM 6.95652
6 2NTK IMP 8.69565
7 3BD9 A3P 8.69565
8 4DYG MES 13.1148
9 5E5U MLI 13.5678
10 1Q19 SSC 13.913
11 3VX3 ADP 16.129
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