Receptor
PDB id Resolution Class Description Source Keywords
4OHZ 2.4 Å NON-ENZYME: OTHER BOUND TO SSRNA TETRANUCLEOTIDE GAAA, ADP, AND MG2+ CAENORHABDITIS ELEGANS POLYNUCLEOTIDE KINASE RNA BINDING PROTEIN-RNA COMPLEX
Ref.: RNA SPECIFICITY AND REGULATION OF CATALYSIS IN THE EUKARYOTIC POLYNUCLEOTIDE KINASE CLP1. MOL.CELL V. 54 975 2014
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ADP A:501;
Valid;
none;
submit data
427.201 C10 H15 N5 O10 P2 c1nc(...
MG A:502;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
G A A A B:1;
Valid;
none;
submit data
1267.85 n/a P(=O)...
2PE A:504;
Invalid;
none;
submit data
414.488 C18 H38 O10 C(COC...
SAR A:503;
Invalid;
none;
submit data
89.093 C3 H7 N O2 CNCC(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4OHY 2 Å NON-ENZYME: OTHER C. ELEGANS CLP1 BOUND TO SSRNA DINUCLEOTIDE GC, AMP-PNP, AND MG2+(INHIBITED SUBSTRATE BOUND STATE) CAENORHABDITIS ELEGANS POLYNUCLEOTIDE KINASE RNA BINDING PROTEIN-RNA COMPLEX
Ref.: RNA SPECIFICITY AND REGULATION OF CATALYSIS IN THE EUKARYOTIC POLYNUCLEOTIDE KINASE CLP1. MOL.CELL V. 54 975 2014
Members (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 4OHZ - G A A A n/a n/a
2 4OI0 - ADP ALF n/a n/a
3 4OHW - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
4 4OHY - ANP C10 H17 N6 O12 P3 c1nc(c2c(n....
5 4OHV - ANP C10 H17 N6 O12 P3 c1nc(c2c(n....
6 4OI1 - ADP ALF n/a n/a
7 4OHX - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
70% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 4OHZ - G A A A n/a n/a
2 4OI0 - ADP ALF n/a n/a
3 4OHW - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
4 4OHY - ANP C10 H17 N6 O12 P3 c1nc(c2c(n....
5 4OHV - ANP C10 H17 N6 O12 P3 c1nc(c2c(n....
6 4OI1 - ADP ALF n/a n/a
7 4OHX - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
50% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 4OHZ - G A A A n/a n/a
2 4OI0 - ADP ALF n/a n/a
3 4OHW - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
4 4OHY - ANP C10 H17 N6 O12 P3 c1nc(c2c(n....
5 4OHV - ANP C10 H17 N6 O12 P3 c1nc(c2c(n....
6 4OI1 - ADP ALF n/a n/a
7 4OHX - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ADP; Similar ligands found: 452
No: Ligand ECFP6 Tc MDL keys Tc
1 ADP 1 1
2 HEJ 0.9 1
3 ATP 0.9 1
4 A2D 0.895522 0.971831
5 5FA 0.887324 1
6 AQP 0.887324 1
7 AP5 0.884058 0.971831
8 B4P 0.884058 0.971831
9 BA3 0.869565 0.971831
10 AN2 0.84507 0.985915
11 AT4 0.84507 0.958904
12 M33 0.833333 0.958333
13 ACQ 0.826667 0.972222
14 A 0.823529 0.971429
15 AMP 0.823529 0.971429
16 ACP 0.821918 0.972222
17 6YZ 0.818182 0.972222
18 APR 0.810811 0.971831
19 AR6 0.810811 0.971831
20 ANP 0.802632 0.972222
21 SAP 0.8 0.945946
22 AGS 0.8 0.945946
23 AD9 0.8 0.972222
24 ADX 0.783784 0.873418
25 CA0 0.783784 0.945205
26 TAT 0.779221 0.958904
27 T99 0.779221 0.958904
28 50T 0.773333 0.958333
29 ABM 0.763889 0.917808
30 APC 0.763158 0.958904
31 PRX 0.763158 0.893333
32 ATF 0.759494 0.958904
33 A22 0.753086 0.985915
34 AP2 0.743243 0.958904
35 A12 0.743243 0.958904
36 SRA 0.736111 0.918919
37 ADQ 0.73494 0.945205
38 25L 0.732558 0.985915
39 5AL 0.725 0.931507
40 2A5 0.717949 0.918919
41 A1R 0.714286 0.907895
42 AU1 0.714286 0.972222
43 A3R 0.714286 0.907895
44 ATR 0.708861 0.971429
45 ADP PO3 0.708861 0.943662
46 PAP 0.708861 0.985714
47 SRP 0.707317 0.906667
48 7D3 0.706667 0.905405
49 25A 0.702381 0.971831
50 9X8 0.697674 0.92
51 OAD 0.697674 0.945205
52 RBY 0.6875 0.932432
53 ADV 0.6875 0.932432
54 00A 0.686047 0.883117
55 OOB 0.682353 0.931507
56 5SV 0.682353 0.848101
57 8QN 0.682353 0.931507
58 3OD 0.681818 0.945205
59 BIS 0.681818 0.933333
60 ALF ADP 0.674699 0.87013
61 ADP ALF 0.674699 0.87013
62 AMO 0.674419 0.932432
63 4AD 0.674419 0.92
64 PAJ 0.674419 0.884615
65 GAP 0.670732 0.893333
66 MAP 0.670588 0.945946
67 AHX 0.666667 0.896104
68 VO4 ADP 0.666667 0.931507
69 DLL 0.666667 0.931507
70 ADP VO4 0.666667 0.931507
71 PTJ 0.662921 0.896104
72 3UK 0.659091 0.918919
73 SON 0.658228 0.932432
74 LMS 0.653333 0.82716
75 LAD 0.651685 0.860759
76 WAQ 0.651685 0.883117
77 B5V 0.651685 0.906667
78 PR8 0.651685 0.85
79 ITT 0.65 0.943662
80 7D4 0.65 0.905405
81 G5P 0.648936 0.921053
82 XYA 0.647059 0.84507
83 ADN 0.647059 0.84507
84 RAB 0.647059 0.84507
85 1ZZ 0.644444 0.839506
86 ME8 0.644444 0.839506
87 FYA 0.644444 0.905405
88 NB8 0.644444 0.896104
89 TXA 0.644444 0.932432
90 6AD 0.642857 0.909091
91 ADP BMA 0.640449 0.918919
92 G3A 0.638298 0.921053
93 DAL AMP 0.632184 0.905405
94 AFH 0.631579 0.884615
95 9SN 0.630435 0.871795
96 9ZA 0.625 0.907895
97 DQV 0.625 0.958333
98 9ZD 0.625 0.907895
99 GTA 0.625 0.886076
100 YAP 0.623656 0.894737
101 B5M 0.623656 0.894737
102 FA5 0.623656 0.906667
103 B5Y 0.623656 0.894737
104 UP5 0.622449 0.92
105 HFD 0.619048 0.945946
106 XAH 0.617021 0.839506
107 AV2 0.616279 0.917808
108 AOC 0.615385 0.821918
109 48N 0.612245 0.896104
110 4UV 0.610526 0.894737
111 6V0 0.606061 0.896104
112 NAI 0.606061 0.907895
113 DND 0.606061 0.932432
114 NAX 0.606061 0.873418
115 NXX 0.606061 0.932432
116 TXD 0.606061 0.907895
117 5N5 0.605634 0.819444
118 5AS 0.604938 0.77907
119 A4P 0.60396 0.843373
120 DAT 0.60241 0.905405
121 A2R 0.602273 0.985915
122 TXE 0.6 0.907895
123 OMR 0.6 0.851852
124 4UU 0.597938 0.894737
125 GA7 0.597938 0.906667
126 A A 0.597826 0.944444
127 A4D 0.597222 0.819444
128 5CD 0.597222 0.805556
129 AP0 0.594059 0.896104
130 4TC 0.594059 0.896104
131 A3P 0.592593 0.971429
132 T5A 0.592233 0.841463
133 139 0.592233 0.873418
134 7D5 0.592105 0.878378
135 ATP A A A 0.589474 0.930556
136 LAQ 0.585859 0.839506
137 MYR AMP 0.585106 0.817073
138 F2R 0.580952 0.864198
139 YLP 0.58 0.819277
140 UPA 0.578431 0.907895
141 7DD 0.578313 0.985714
142 3AM 0.576923 0.929577
143 ADJ 0.576923 0.851852
144 COD 0.575472 0.811765
145 NAD 0.575472 0.931507
146 3AT 0.574713 0.971831
147 JB6 0.574468 0.883117
148 4UW 0.574257 0.860759
149 EP4 0.573333 0.753247
150 A2P 0.573171 0.957143
151 CNA 0.571429 0.932432
152 TYM 0.568627 0.906667
153 PPS 0.568182 0.873418
154 DTA 0.565789 0.786667
155 M2T 0.565789 0.734177
156 AR6 AR6 0.565657 0.917808
157 A3D 0.564815 0.918919
158 80F 0.564815 0.841463
159 3DH 0.564103 0.773333
160 G5A 0.563218 0.77907
161 YLB 0.563107 0.819277
162 YLC 0.563107 0.839506
163 AMP DBH 0.561224 0.893333
164 TYR AMP 0.561224 0.87013
165 MTA 0.558442 0.773333
166 DTP 0.556818 0.905405
167 AHZ 0.554455 0.817073
168 NA7 0.553191 0.958904
169 IOT 0.552381 0.831325
170 ZAS 0.55 0.766234
171 7MD 0.55 0.8625
172 ARG AMP 0.55 0.829268
173 IMO 0.548781 0.929577
174 YLA 0.54717 0.819277
175 NAE 0.544643 0.894737
176 TAD 0.544554 0.884615
177 A5A 0.544444 0.807229
178 2AM 0.544304 0.943662
179 TSB 0.543478 0.819277
180 6RE 0.54321 0.759494
181 AYB 0.542056 0.809524
182 NAQ 0.539823 0.871795
183 V3L 0.539326 0.971831
184 SSA 0.538462 0.8
185 AF3 ADP 3PG 0.538462 0.8375
186 ZID 0.535088 0.918919
187 LPA AMP 0.533981 0.817073
188 52H 0.532609 0.77907
189 VMS 0.532609 0.788235
190 54H 0.532609 0.788235
191 BTX 0.53211 0.841463
192 A3N 0.53012 0.786667
193 J7C 0.53012 0.769231
194 5X8 0.528736 0.763158
195 BT5 0.527273 0.831325
196 8X1 0.526882 0.752809
197 5CA 0.526882 0.8
198 53H 0.526882 0.77907
199 ARU 0.526316 0.860759
200 EAD 0.525862 0.873418
201 RGT 0.525253 0.958904
202 OVE 0.52439 0.905405
203 S4M 0.52381 0.666667
204 7DT 0.522727 0.985714
205 GDP 0.522222 0.92
206 DDS 0.522222 0.878378
207 AVV 0.521277 0.896104
208 NDE 0.521008 0.932432
209 7MC 0.518868 0.841463
210 DSH 0.518072 0.725
211 MAO 0.517647 0.759036
212 NSS 0.515789 0.8
213 DSZ 0.515789 0.8
214 LSS 0.515789 0.761364
215 P5A 0.515464 0.744444
216 DZD 0.513514 0.884615
217 NVA LMS 0.510417 0.752809
218 9K8 0.510204 0.714286
219 12D 0.509615 0.785714
220 M24 0.508772 0.85
221 YLY 0.508772 0.809524
222 P1H 0.508333 0.851852
223 5AD 0.506849 0.746479
224 GJV 0.505882 0.75
225 LEU LMS 0.505155 0.752809
226 AMP NAD 0.504505 0.905405
227 4TA 0.504505 0.807229
228 G A A A 0.504505 0.871795
229 NAJ PZO 0.504425 0.848101
230 GSU 0.5 0.77907
231 128 0.5 0.776471
232 KAA 0.5 0.752809
233 71V 0.5 0.907895
234 A3G 0.5 0.8
235 NDC 0.5 0.871795
236 7D7 0.5 0.743243
237 N0B 0.495726 0.819277
238 NJP 0.495495 0.945946
239 ODP 0.495495 0.909091
240 2SA 0.494624 0.932432
241 6C6 0.494505 0.881579
242 SFG 0.494382 0.75
243 0WD 0.491071 0.921053
244 YSA 0.490196 0.77907
245 PO4 PO4 A A A A PO4 0.489796 0.902778
246 SAM 0.48913 0.690476
247 6IA 0.48913 0.8375
248 A7D 0.488636 0.776316
249 6FA 0.488 0.841463
250 FB0 0.487805 0.804598
251 NAJ PYZ 0.487179 0.807229
252 A5D 0.483516 0.786667
253 IDP 0.483516 0.918919
254 SA8 0.483516 0.707317
255 PGS 0.483146 0.883117
256 MHZ 0.483146 0.697674
257 DA 0.482353 0.878378
258 D5M 0.482353 0.878378
259 NEC 0.482353 0.746667
260 NIA 0.481928 0.822785
261 Y3J 0.480519 0.726027
262 8PZ 0.480392 0.8
263 FAD 0.480315 0.851852
264 FAS 0.480315 0.851852
265 FDA 0.48 0.833333
266 N6P 0.479592 0.915493
267 GGZ 0.479167 0.825
268 U A 0.478261 0.907895
269 SAH 0.478261 0.74359
270 SAI 0.478261 0.734177
271 A G 0.477876 0.883117
272 NPW 0.477477 0.886076
273 NDP 0.477477 0.921053
274 AAM 0.476744 0.971429
275 C2R 0.47561 0.90411
276 AMZ 0.47561 0.916667
277 A A A 0.474747 0.905405
278 GTP 0.473684 0.92
279 U A G G 0.473684 0.883117
280 SMM 0.473684 0.686047
281 NZQ 0.473214 0.909091
282 TXP 0.473214 0.921053
283 A3S 0.47191 0.810811
284 SFD 0.46875 0.734043
285 AIR 0.468354 0.901408
286 AAT 0.468085 0.707317
287 EEM 0.468085 0.690476
288 J7V 0.466667 0.833333
289 Z5A 0.466667 0.77907
290 7C5 0.466667 0.818182
291 62F 0.465649 0.8625
292 HDV 0.463158 0.893333
293 FAY 0.462121 0.8625
294 A3T 0.461538 0.821918
295 ETB 0.461538 0.833333
296 DCA 0.461538 0.823529
297 A6D 0.46 0.722892
298 A U 0.459459 0.87013
299 GEK 0.459184 0.7375
300 6K6 0.459184 0.930556
301 RFL 0.458647 0.821429
302 NAP 0.458333 0.945205
303 S7M 0.458333 0.690476
304 4YB 0.457944 0.761364
305 WSA 0.454545 0.788235
306 TAP 0.454545 0.907895
307 FNK 0.454545 0.804598
308 COA 0.453782 0.823529
309 0T1 0.453782 0.823529
310 101 0.453488 0.878378
311 XNP 0.452174 0.873418
312 NA0 0.45082 0.932432
313 7RP 0.448276 0.928571
314 GP3 0.446809 0.921053
315 TM1 0.446602 0.77381
316 APU 0.446429 0.894737
317 PUA 0.445378 0.884615
318 V1N 0.443396 0.917808
319 7RA 0.443182 0.957747
320 COS 0.442623 0.804598
321 AMX 0.442623 0.833333
322 30N 0.442623 0.752688
323 CAO 0.442623 0.795455
324 QQY 0.44186 0.815789
325 ACK 0.44186 0.861111
326 649 0.441441 0.744444
327 0UM 0.44 0.698795
328 NHD 0.439655 0.905405
329 CMX 0.439024 0.823529
330 SCO 0.439024 0.823529
331 GCP 0.438776 0.896104
332 8BR 0.438202 0.906667
333 GNH 0.4375 0.907895
334 8Q2 0.4375 0.772727
335 3AD 0.4375 0.805556
336 NVA 2AD 0.43617 0.759494
337 62X 0.435644 0.666667
338 FCX 0.435484 0.795455
339 ACO 0.435484 0.795455
340 FAM 0.435484 0.804598
341 9JJ 0.434783 0.8625
342 GNP 0.434343 0.896104
343 9GM 0.434343 0.896104
344 NMX 0.433071 0.76087
345 MGP 0.43299 0.884615
346 26A 0.432099 0.763158
347 HAX 0.432 0.804598
348 K15 0.431373 0.682353
349 DG1 0.430894 0.921053
350 1DG 0.430894 0.921053
351 QQX 0.430233 0.805195
352 2VA 0.430108 0.8
353 S8M 0.43 0.759494
354 2MC 0.429688 0.769231
355 6G0 0.428571 0.884615
356 P5F 0.428571 0.823529
357 FYN 0.428571 0.823529
358 3KK 0.428571 0.804598
359 A C A C 0.428571 0.848101
360 7L1 0.427419 0.795455
361 FAI 0.426966 0.916667
362 RMB 0.426966 0.873239
363 AS 0.426966 0.833333
364 1RB 0.425287 0.885714
365 CA6 0.425197 0.729167
366 SOP 0.425197 0.804598
367 OXK 0.425197 0.804598
368 MCD 0.425197 0.804598
369 COK 0.425197 0.804598
370 G1R 0.424242 0.907895
371 SXZ 0.423077 0.710843
372 CC5 0.423077 0.816901
373 F2N 0.422535 0.813953
374 EO7 0.422222 0.788235
375 ANZ 0.422018 0.8
376 1VU 0.421875 0.795455
377 CMC 0.421875 0.804598
378 CO6 0.421875 0.804598
379 ZDA 0.421053 0.864865
380 GKE 0.420561 0.884615
381 GDC 0.420561 0.884615
382 GDD 0.420561 0.884615
383 NFD 0.420168 0.883117
384 GSP 0.42 0.873418
385 D3Y 0.42 0.789474
386 MC4 0.419847 0.76087
387 3D1 0.419753 0.773333
388 3L1 0.419753 0.773333
389 FA9 0.41958 0.864198
390 5GP 0.419355 0.906667
391 G 0.419355 0.906667
392 KB1 0.419048 0.698795
393 CAJ 0.418605 0.804598
394 SCD 0.418605 0.823529
395 CMP 0.417582 0.901408
396 2BA 0.417582 0.915493
397 SO8 0.416667 0.789474
398 VRT 0.416667 0.769231
399 N01 0.416667 0.905405
400 IVC 0.415385 0.813953
401 1HE 0.415385 0.786517
402 A1S 0.415385 0.804598
403 BCO 0.415385 0.804598
404 3HC 0.415385 0.813953
405 MLC 0.415385 0.804598
406 NMN AMP PO4 0.415254 0.87013
407 2FA 0.414634 0.813333
408 MGO 0.414141 0.860759
409 3NZ 0.413462 0.782051
410 COO 0.412214 0.804598
411 MCA 0.412214 0.795455
412 YE1 0.412214 0.813953
413 CAA 0.412214 0.813953
414 GAV 0.411765 0.884615
415 PRT 0.411215 0.931507
416 JLN 0.411111 0.890411
417 P2P 0.411111 0.902778
418 ZZB 0.410256 0.77381
419 SP1 0.409091 0.842105
420 RP1 0.409091 0.842105
421 2CP 0.409091 0.795455
422 SCA 0.409091 0.804598
423 103 0.409091 0.837838
424 PAX 0.408 0.829268
425 FAD NBT 0.407143 0.75
426 COW 0.406015 0.795455
427 3CP 0.406015 0.804598
428 IRC 0.406015 0.813953
429 BYC 0.406015 0.804598
430 CA8 0.406015 0.729167
431 1GZ 0.406015 0.795455
432 COF 0.406015 0.786517
433 HGG 0.406015 0.804598
434 2KQ 0.406015 0.786517
435 G2P 0.405941 0.884615
436 SLU 0.404959 0.770115
437 U A C C 0.404959 0.858974
438 RBZ 0.404494 0.849315
439 1CZ 0.404412 0.795455
440 FAQ 0.402985 0.804598
441 BCA 0.402985 0.795455
442 4CA 0.402985 0.795455
443 MTP 0.402439 0.730769
444 8OD 0.402062 0.945205
445 CO7 0.401515 0.804598
446 GRA 0.4 0.804598
447 G2R 0.4 0.884615
448 ENQ 0.4 0.916667
449 CNV FAD 0.4 0.8
450 GMV 0.4 0.896104
451 HXC 0.4 0.786517
452 HF7 0.4 0.893333
Ligand no: 2; Ligand: G A A A ; Similar ligands found: 251
No: Ligand ECFP6 Tc MDL keys Tc
1 G A A A 1 1
2 U A G G 0.915888 0.986842
3 A G 0.906542 0.986842
4 APC G U 0.784483 0.935897
5 A G U 0.769841 0.962025
6 A G U U 0.740458 0.962025
7 G G 0.711712 0.974026
8 G3A 0.690265 0.948718
9 G5P 0.684211 0.948718
10 A A 0.672727 0.896104
11 ATP A A A 0.663717 0.907895
12 G C 0.611111 0.949367
13 G U 0.595238 0.949367
14 ALF 5GP 0.594595 0.890244
15 A C A C 0.580153 0.924051
16 5GP 0.579439 0.935065
17 G 0.579439 0.935065
18 A U 0.579365 0.898734
19 G G G C 0.571429 0.9375
20 U A 0.568182 0.8875
21 GDP AF3 0.564103 0.890244
22 GCP G 0.563025 0.922078
23 U A A U 0.562044 0.8875
24 G G G RPC 0.561538 0.924051
25 3GP 0.560748 0.922078
26 G3D 0.556522 0.910256
27 A G C C 0.555556 0.936709
28 GDP 0.553571 0.923077
29 A U C C 0.553191 0.924051
30 A A A 0.550847 0.860759
31 GDP ALF 0.550847 0.890244
32 ALF GDP 0.550847 0.890244
33 G C C C 0.550725 0.925
34 G4P 0.547009 0.910256
35 GP2 0.539823 0.888889
36 GNH 0.535088 0.911392
37 U A C C 0.533333 0.911392
38 GP3 0.530973 0.948718
39 GSP 0.529915 0.878049
40 G2P 0.529915 0.888889
41 GPG 0.528926 0.961538
42 0O2 0.528926 0.910256
43 GAP 0.526316 0.897436
44 GTP 0.525862 0.923077
45 GKE 0.524194 0.936709
46 GDD 0.524194 0.936709
47 GDC 0.524194 0.936709
48 ADP PO3 0.522124 0.894737
49 GCP 0.521368 0.9
50 AMP 0.518868 0.87013
51 A 0.518868 0.87013
52 G1R G1R 0.514286 0.949367
53 GMV 0.512821 0.9
54 ADP VO4 0.512821 0.860759
55 VO4 ADP 0.512821 0.860759
56 ADP BMA 0.512397 0.897436
57 GDP 7MG 0.511811 0.961538
58 A3P 0.509091 0.87013
59 G1R 0.508475 0.911392
60 GAV 0.508333 0.888889
61 GMP 0.504762 0.857143
62 ADP 0.504505 0.871795
63 ALF ADP 0.504274 0.829268
64 ADP ALF 0.504274 0.829268
65 9GM 0.504202 0.9
66 GNP 0.504202 0.9
67 GTA 0.496124 0.9375
68 4BW 0.496063 0.922078
69 1YD 0.496063 0.922078
70 G2R 0.495935 0.888889
71 PAP 0.495652 0.858974
72 3AM 0.495327 0.857143
73 DAL AMP 0.491667 0.884615
74 A2D 0.490909 0.871795
75 ABM 0.490909 0.825
76 AT4 0.486726 0.839506
77 AN2 0.486726 0.860759
78 SRA 0.486239 0.82716
79 CG2 0.485294 0.91358
80 SAP 0.482759 0.829268
81 AGS 0.482759 0.829268
82 CA0 0.482456 0.85
83 BA3 0.482143 0.871795
84 A12 0.482143 0.839506
85 AP2 0.482143 0.839506
86 6CK 0.48062 0.890244
87 YGP 0.480315 0.879518
88 HEJ 0.478261 0.871795
89 ATP 0.478261 0.871795
90 JBT 0.478022 0.78125
91 AP5 0.477876 0.871795
92 B4P 0.477876 0.871795
93 AR6 AR6 0.476923 0.896104
94 Y9Z 0.476562 0.858824
95 MYR AMP 0.47619 0.802326
96 ACQ 0.474576 0.85
97 ANP 0.474576 0.85
98 APC 0.474138 0.839506
99 AQP 0.474138 0.871795
100 5FA 0.474138 0.871795
101 GKD 0.473282 0.936709
102 GDR 0.472868 0.9125
103 GFB 0.472868 0.9125
104 ADQ 0.471545 0.873418
105 U2G 0.470588 0.91358
106 PPS 0.470588 0.770115
107 AU1 0.469565 0.85
108 M33 0.469565 0.8375
109 ADX 0.469565 0.770115
110 PAX 0.468966 0.813953
111 4TA 0.467626 0.813953
112 A22 0.467213 0.884615
113 UPA 0.466667 0.864198
114 50T 0.465517 0.8375
115 ACP 0.465517 0.85
116 25A 0.463415 0.896104
117 6YZ 0.46281 0.85
118 TAT 0.462185 0.839506
119 T99 0.462185 0.839506
120 JB2 0.462121 0.9125
121 AMP DBH 0.461538 0.873418
122 AR6 0.461538 0.848101
123 TYR AMP 0.461538 0.875
124 PRX 0.461538 0.804878
125 APR 0.461538 0.848101
126 GTG 0.461538 0.9375
127 4AD 0.459677 0.851852
128 PGD O 0.458904 0.831461
129 GPD 0.458647 0.879518
130 GDX 0.458647 0.924051
131 5AL 0.458333 0.860759
132 RBY 0.457627 0.817073
133 AD9 0.457627 0.85
134 ADV 0.457627 0.817073
135 B5Y 0.457364 0.875
136 3OD 0.456693 0.85
137 ZGP 0.456522 0.870588
138 DG DA DC DG 0.455696 0.903614
139 MAP 0.455285 0.829268
140 ATF 0.454545 0.839506
141 APU 0.452555 0.875
142 JB3 0.452555 0.901235
143 4UR 0.452555 0.922078
144 PO4 PO4 A A A A PO4 0.452381 0.881579
145 2GP 0.452174 0.910256
146 4UW 0.451852 0.821429
147 OOB 0.451613 0.884615
148 DC DG DA DC 0.451613 0.879518
149 SRP 0.45082 0.8625
150 4UV 0.450382 0.851852
151 2MD 0.45 0.848837
152 FEG 0.449275 0.880952
153 WAQ 0.448819 0.819277
154 AMO 0.448 0.839506
155 PAJ 0.448 0.821429
156 1YC 0.44697 0.896104
157 AMP NAD 0.446809 0.909091
158 139 0.446043 0.833333
159 G U34 0.446043 0.9375
160 FYA 0.445312 0.8375
161 1ZZ 0.445312 0.781609
162 DLL 0.444444 0.884615
163 00A 0.444444 0.841463
164 LPA AMP 0.444444 0.802326
165 4UU 0.443609 0.851852
166 ARG AMP 0.443609 0.902439
167 A4P 0.442029 0.870588
168 25L 0.44186 0.884615
169 9X8 0.440945 0.807229
170 3UK 0.440945 0.897436
171 CAG 0.440559 0.882353
172 5SV 0.44 0.767442
173 9ZD 0.44 0.841463
174 9ZA 0.44 0.841463
175 8QN 0.44 0.860759
176 Z5A 0.439189 0.806818
177 NGD 0.438849 0.961538
178 9SN 0.438462 0.853659
179 AF3 ADP 3PG 0.437956 0.821429
180 LMS 0.4375 0.75
181 PR8 0.4375 0.811765
182 B5V 0.4375 0.886076
183 LAD 0.4375 0.821429
184 AHZ 0.437037 0.823529
185 NAD 0.43662 0.909091
186 A1R 0.436508 0.819277
187 A3R 0.436508 0.819277
188 SON 0.435897 0.8625
189 4TC 0.434783 0.831325
190 PTJ 0.434109 0.831325
191 NB8 0.434109 0.809524
192 DG DG 0.434109 0.9375
193 DA DC DG DA 0.432927 0.869048
194 ADN 0.432692 0.779221
195 XYA 0.432692 0.779221
196 RAB 0.432692 0.779221
197 PUA 0.431507 0.821429
198 UP5 0.430657 0.851852
199 A3D 0.430556 0.897436
200 MGD 0.430556 0.848837
201 AOC 0.429825 0.759494
202 OAD 0.429688 0.85
203 BGO 0.428571 0.901235
204 T5A 0.425532 0.784091
205 FA5 0.424242 0.8625
206 YAP 0.424242 0.851852
207 B5M 0.424242 0.875
208 DT DA DC DG 0.423529 0.860465
209 BIS 0.423077 0.819277
210 ME8 0.423077 0.781609
211 TXA 0.423077 0.839506
212 JB6 0.423077 0.819277
213 TPG 0.422819 0.802198
214 DBG 0.422819 0.925
215 AHX 0.421875 0.831325
216 FE9 0.421769 0.778947
217 DC DG DT DA 0.421053 0.860465
218 DND 0.42029 0.886076
219 NXX 0.42029 0.886076
220 DC DG 0.41958 0.891566
221 NAE 0.418919 0.898734
222 TYM 0.417266 0.8625
223 LAQ 0.416058 0.781609
224 5AS 0.415254 0.728261
225 7C5 0.414815 0.896104
226 ZID 0.413333 0.922078
227 P1G 0.413223 0.85
228 YLP 0.413043 0.784091
229 7D5 0.410714 0.8125
230 MD1 0.409396 0.848837
231 PGD 0.409396 0.879518
232 DQV 0.408759 0.884615
233 NAJ PZO 0.408163 0.853659
234 0WD 0.406897 0.853659
235 A2P 0.40678 0.857143
236 NAQ 0.406667 0.876543
237 G4M 0.405063 0.882353
238 YLC 0.404255 0.802326
239 M24 0.402685 0.833333
240 2A5 0.401639 0.82716
241 GA7 0.40146 0.839506
242 AFH 0.40146 0.821429
243 7MD 0.40146 0.802326
244 GPC 0.401361 0.880952
245 NDC 0.401274 0.876543
246 DGP 0.4 0.864198
247 GPX 0.4 0.873418
248 DG 0.4 0.864198
249 GGM 0.4 0.879518
250 NAI 0.4 0.841463
251 XAH 0.4 0.802326
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4OHY; Ligand: ANP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4ohy.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
APoc FAQ
Feedback