Receptor
PDB id Resolution Class Description Source Keywords
4L2I 1.45 Å NON-ENZYME: OTHER ELECTRON TRANSFERRING FLAVOPROTEIN OF ACIDAMINOCOCCUS FERMEN TOWARDS A MECHANISM OF FLAVIN-BASED ELECTRON BIFURCATION ACIDAMINOCOCCUS FERMENTANS FAD ELECTRON TRANSFERRING FLAVOPROTEIN (ETF) BUTYRYL-COA DEHYDROGENASE FERREDOXIN NADH ELECTRON TRANSPORT
Ref.: STUDIES ON THE MECHANISM OF ELECTRON BIFURCATION CA BY ELECTRON TRANSFERRING FLAVOPROTEIN (ETF) AND BUT DEHYDROGENASE (BCD) OF ACIDAMINOCOCCUS FERMENTANS. J.BIOL.CHEM. V. 289 5145 2014
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CL A:402;
Invalid;
none;
submit data
35.453 Cl [Cl-]
FAD A:401;
B:301;
Valid;
Valid;
none;
none;
submit data
785.55 C27 H33 N9 O15 P2 Cc1cc...
NAD B:302;
Valid;
none;
submit data
663.425 C21 H27 N7 O14 P2 c1cc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4L2I 1.45 Å NON-ENZYME: OTHER ELECTRON TRANSFERRING FLAVOPROTEIN OF ACIDAMINOCOCCUS FERMEN TOWARDS A MECHANISM OF FLAVIN-BASED ELECTRON BIFURCATION ACIDAMINOCOCCUS FERMENTANS FAD ELECTRON TRANSFERRING FLAVOPROTEIN (ETF) BUTYRYL-COA DEHYDROGENASE FERREDOXIN NADH ELECTRON TRANSPORT
Ref.: STUDIES ON THE MECHANISM OF ELECTRON BIFURCATION CA BY ELECTRON TRANSFERRING FLAVOPROTEIN (ETF) AND BUT DEHYDROGENASE (BCD) OF ACIDAMINOCOCCUS FERMENTANS. J.BIOL.CHEM. V. 289 5145 2014
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 4L2I - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
2 4KPU - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 4L2I - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
2 4KPU - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 4L2I - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
2 4KPU - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: FAD; Similar ligands found: 119
No: Ligand ECFP6 Tc MDL keys Tc
1 FAS 1 1
2 FAD 1 1
3 FAY 0.859259 0.9875
4 RFL 0.852941 0.963855
5 6FA 0.794118 0.987654
6 DAL FAD PER 0.772414 0.951807
7 FAE 0.751773 0.987654
8 SFD 0.651007 0.860215
9 FDA 0.641892 0.906977
10 FNK 0.602564 0.876405
11 62F 0.572327 0.939024
12 F2N 0.566265 0.886364
13 FMN 0.543307 0.876543
14 FA9 0.526316 0.939759
15 6YU 0.516304 0.860215
16 CNV FAD 0.511905 0.908046
17 P6G FDA 0.511628 0.908046
18 FAD NBT 0.508876 0.83871
19 A2D 0.504065 0.875
20 P5F 0.491329 0.941176
21 FAD CNX 0.488506 0.8125
22 APR 0.488372 0.851852
23 AR6 0.488372 0.851852
24 AGS 0.484615 0.811765
25 SAP 0.484615 0.811765
26 M33 0.484375 0.864198
27 BA3 0.484127 0.875
28 FAD NBA 0.480663 0.802083
29 ATP 0.48062 0.851852
30 B4P 0.480315 0.875
31 ADP 0.480315 0.851852
32 AP5 0.480315 0.875
33 ANP 0.477273 0.831325
34 AQP 0.476923 0.851852
35 5FA 0.476923 0.851852
36 48N 0.469388 0.902439
37 OAD 0.467626 0.876543
38 GTA 0.465753 0.892857
39 AN2 0.465116 0.841463
40 AD9 0.462121 0.831325
41 3OD 0.460993 0.876543
42 RBF 0.460938 0.790123
43 FB0 0.460606 0.835165
44 139 0.460526 0.858824
45 AP0 0.46 0.835294
46 A22 0.459854 0.864198
47 ACP 0.458015 0.853659
48 8QN 0.456522 0.864198
49 PRX 0.454545 0.831325
50 A1R 0.453237 0.86747
51 G3A 0.452055 0.902439
52 T5A 0.45098 0.872093
53 G5P 0.44898 0.902439
54 ATF 0.448529 0.821429
55 50T 0.44697 0.819277
56 ACQ 0.444444 0.853659
57 PAJ 0.442857 0.847059
58 ADQ 0.442857 0.853659
59 5AL 0.441176 0.864198
60 ADX 0.439394 0.775281
61 CA0 0.439394 0.853659
62 A4P 0.437909 0.831461
63 25L 0.4375 0.864198
64 P33 FDA 0.436464 0.817204
65 5SV 0.435714 0.793103
66 TXE 0.434211 0.890244
67 OMR 0.434211 0.818182
68 ABM 0.434109 0.829268
69 A 0.433071 0.82716
70 AMP 0.433071 0.82716
71 4AD 0.432624 0.855422
72 ADJ 0.432258 0.818182
73 BIS 0.430556 0.802326
74 SRA 0.429688 0.788235
75 AFH 0.42953 0.825581
76 TXD 0.427632 0.890244
77 NXX 0.427632 0.865854
78 UP5 0.427632 0.878049
79 DND 0.427632 0.865854
80 6V0 0.427632 0.857143
81 SRP 0.42446 0.843373
82 PR8 0.423611 0.837209
83 TAT 0.423358 0.821429
84 AMO 0.422535 0.865854
85 PTJ 0.42069 0.835294
86 FYA 0.42069 0.864198
87 TXA 0.42069 0.865854
88 CNA 0.420382 0.865854
89 00A 0.41958 0.823529
90 AHX 0.41958 0.835294
91 MAP 0.41844 0.811765
92 NAI 0.418301 0.845238
93 AU1 0.41791 0.831325
94 AP2 0.416667 0.843373
95 A12 0.416667 0.843373
96 25A 0.415493 0.851852
97 AMP MG 0.415385 0.785714
98 COD 0.415094 0.842697
99 ADP BEF 0.414815 0.77907
100 BEF ADP 0.414815 0.77907
101 4TC 0.412903 0.879518
102 APC 0.411765 0.843373
103 NB8 0.410959 0.835294
104 ME8 0.410959 0.806818
105 1ZZ 0.410959 0.806818
106 4UW 0.409091 0.825581
107 NAX 0.409091 0.837209
108 RBY 0.408759 0.843373
109 ADV 0.408759 0.843373
110 ADP MG 0.407407 0.797619
111 P1H 0.405882 0.818182
112 OOB 0.405594 0.864198
113 A A 0.40411 0.829268
114 LAD 0.40411 0.825581
115 UPA 0.403846 0.86747
116 4UU 0.401316 0.833333
117 A3D 0.401235 0.876543
118 DLL 0.4 0.864198
119 XAH 0.4 0.806818
Ligand no: 2; Ligand: NAD; Similar ligands found: 220
No: Ligand ECFP6 Tc MDL keys Tc
1 A3D 0.872727 0.986111
2 NAD IBO 0.845455 0.933333
3 NHD 0.821429 0.972222
4 NAP 0.811966 0.986111
5 NAJ PYZ 0.803419 0.910256
6 NFD 0.791304 0.946667
7 NXX 0.765766 0.972603
8 DND 0.765766 0.972603
9 ZID 0.737705 0.986111
10 NAQ 0.729508 0.934211
11 NAE 0.721311 0.959459
12 NA0 0.712 0.972603
13 TAP 0.704 0.921053
14 AMP NAD 0.696 0.945946
15 NDE 0.689922 0.972603
16 NAJ 0.683333 0.972222
17 NDC 0.679389 0.934211
18 NDO 0.674603 0.958904
19 N01 0.656 0.972222
20 CNA 0.642276 0.972603
21 NBP 0.621212 0.922078
22 NAD BBN 0.609929 0.876543
23 8ID 0.609756 0.922078
24 NAD CJ3 0.601399 0.845238
25 ADP MG 0.579439 0.918919
26 A2D 0.576923 0.958333
27 ADP 0.575472 0.931507
28 NGD 0.574803 0.922078
29 BEF ADP 0.574074 0.894737
30 ADP BEF 0.574074 0.894737
31 BA3 0.566038 0.958333
32 NAD NDT 0.565789 0.755319
33 M33 0.564815 0.918919
34 ADP PO3 0.563636 0.957747
35 B4P 0.560748 0.958333
36 AP5 0.560748 0.958333
37 ATP MG 0.558559 0.918919
38 AN2 0.555556 0.918919
39 GAP 0.553571 0.932432
40 OOB 0.551724 0.972222
41 CA0 0.550459 0.932432
42 ATP 0.545455 0.931507
43 ACP 0.545455 0.906667
44 NAD TDB 0.544872 0.70297
45 ADP ALF 0.54386 0.883117
46 ALF ADP 0.54386 0.883117
47 5FA 0.540541 0.931507
48 AQP 0.540541 0.931507
49 APR 0.540541 0.931507
50 AR6 0.540541 0.931507
51 ANP MG 0.53913 0.907895
52 VO4 ADP 0.53913 0.945205
53 ADP VO4 0.53913 0.945205
54 AGS 0.535714 0.883117
55 SAP 0.535714 0.883117
56 AD9 0.535714 0.906667
57 WAQ 0.533333 0.896104
58 ABM 0.53271 0.905405
59 00A 0.529412 0.921053
60 DLL 0.529412 0.972222
61 ANP 0.526316 0.906667
62 NJP 0.526316 0.959459
63 ACQ 0.526316 0.906667
64 OAD 0.525 0.932432
65 AMP MG 0.523364 0.905405
66 ADX 0.522523 0.839506
67 5AL 0.521739 0.945205
68 A1R 0.521008 0.871795
69 9SN 0.520325 0.909091
70 AMP 0.518868 0.930556
71 A 0.518868 0.930556
72 50T 0.517857 0.893333
73 ATF 0.517241 0.894737
74 DAL AMP 0.516949 0.945205
75 3OD 0.516393 0.932432
76 1ZZ 0.516393 0.851852
77 SON 0.513514 0.92
78 PRX 0.513274 0.881579
79 SRP 0.512821 0.92
80 ADP BMA 0.512397 0.932432
81 3UK 0.512397 0.958904
82 MYR AMP 0.512195 0.851852
83 NAJ PZO 0.510949 0.909091
84 NMN 0.509434 0.875
85 AMP DBH 0.507937 0.906667
86 A22 0.504202 0.945205
87 FA5 0.504 0.945946
88 ATP A A A 0.504 0.971831
89 TYR AMP 0.5 0.945946
90 8QN 0.5 0.945205
91 NAX 0.496183 0.886076
92 PR8 0.495935 0.8625
93 PAJ 0.495868 0.873418
94 4AD 0.495868 0.933333
95 AMO 0.495868 0.92
96 ADQ 0.495868 0.932432
97 A12 0.495495 0.894737
98 AP2 0.495495 0.894737
99 ALF ADP 3PG 0.492424 0.873418
100 LA8 ALF 3PG 0.492424 0.873418
101 AHZ 0.492308 0.851852
102 YAP 0.492063 0.933333
103 FYA 0.491935 0.918919
104 AHX 0.491803 0.884615
105 4UU 0.488372 0.933333
106 5SV 0.487603 0.8375
107 TAT 0.487179 0.894737
108 APC 0.486957 0.894737
109 SRA 0.486239 0.881579
110 NAI 0.484848 0.921053
111 6V0 0.484848 0.909091
112 GTA 0.484615 0.898734
113 A A 0.483871 0.958333
114 LAD 0.483871 0.873418
115 AU1 0.482456 0.906667
116 TXE 0.481203 0.921053
117 AF3 ADP 3PG 0.481203 0.873418
118 OMR 0.481203 0.841463
119 LAQ 0.480916 0.851852
120 G3A 0.48062 0.909091
121 TXA 0.48 0.92
122 NB8 0.48 0.884615
123 ME8 0.48 0.851852
124 BIS 0.48 0.871795
125 PTJ 0.48 0.884615
126 139 0.477941 0.886076
127 LPA AMP 0.477273 0.851852
128 AR6 AR6 0.476923 0.958333
129 G5P 0.476923 0.909091
130 AFH 0.476923 0.873418
131 25L 0.47619 0.945205
132 25A 0.47541 0.958333
133 DZD 0.47482 0.897436
134 TXD 0.473684 0.921053
135 4UV 0.472868 0.933333
136 TYM 0.470149 0.945946
137 ADV 0.470085 0.894737
138 RBY 0.470085 0.894737
139 ARG AMP 0.469697 0.841463
140 4TA 0.467626 0.864198
141 48N 0.466165 0.884615
142 XAH 0.465116 0.851852
143 4UW 0.462687 0.897436
144 M24 0.461538 0.886076
145 IOT 0.459854 0.821429
146 T5A 0.456522 0.853659
147 EAD 0.455782 0.886076
148 MAP 0.455285 0.883117
149 BT5 0.453901 0.821429
150 A4P 0.452555 0.833333
151 UP5 0.451852 0.933333
152 PAP 0.445378 0.917808
153 AP0 0.445255 0.884615
154 4TC 0.445255 0.909091
155 YLP 0.444444 0.831325
156 P1H 0.443709 0.864198
157 AOC 0.442478 0.810811
158 Z5A 0.439189 0.833333
159 2A5 0.436975 0.857143
160 G A A A 0.43662 0.909091
161 COD 0.43662 0.802326
162 ADJ 0.435714 0.841463
163 YLC 0.434783 0.851852
164 YLB 0.434783 0.831325
165 U A G G 0.433566 0.921053
166 ATR 0.433333 0.90411
167 7MD 0.432836 0.851852
168 G5A 0.429752 0.790698
169 PO4 PO4 A A A A PO4 0.429688 0.943662
170 TAD 0.42963 0.873418
171 5AS 0.42735 0.770115
172 BTX 0.426573 0.831325
173 YLA 0.425532 0.831325
174 DSZ 0.425197 0.790698
175 NCN 0.424779 0.805556
176 UPA 0.42446 0.921053
177 VMS 0.424 0.8
178 54H 0.424 0.8
179 N0B 0.422819 0.853659
180 6AD 0.422764 0.85
181 AYB 0.422535 0.821429
182 7D3 0.422414 0.844156
183 YLY 0.421769 0.821429
184 TSB 0.420635 0.809524
185 ODP 0.41958 0.922078
186 AV2 0.419355 0.855263
187 FB0 0.419355 0.775281
188 A5A 0.419355 0.819277
189 NNR 0.419048 0.739726
190 A A A 0.418605 0.918919
191 LEU LMS 0.418605 0.793103
192 649 0.417266 0.775281
193 NMN AMP PO4 0.416667 0.933333
194 SSA 0.416 0.790698
195 P5A 0.415385 0.755556
196 LSS 0.414062 0.772727
197 A2R 0.412698 0.918919
198 52H 0.412698 0.790698
199 JB6 0.412214 0.896104
200 5N5 0.411215 0.783784
201 YSA 0.410448 0.811765
202 5CA 0.409449 0.790698
203 53H 0.409449 0.790698
204 ITT 0.408333 0.878378
205 7D4 0.408333 0.844156
206 NA7 0.407692 0.894737
207 5CD 0.407407 0.794521
208 0WD 0.406897 0.909091
209 A3P 0.40678 0.930556
210 AVV 0.40625 0.860759
211 RAB 0.40566 0.808219
212 ADN 0.40566 0.808219
213 XYA 0.40566 0.808219
214 FDA 0.405063 0.823529
215 GSU 0.40458 0.790698
216 7MC 0.404255 0.831325
217 NSS 0.403101 0.811765
218 6FA 0.402516 0.853659
219 NVA LMS 0.4 0.793103
220 PPS 0.4 0.817073
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4L2I; Ligand: FAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4l2i.bio1) has 31 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 4L2I; Ligand: NAD; Similar sites found: 142
This union binding pocket(no: 2) in the query (biounit: 4l2i.bio1) has 45 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2PZ8 APC 0.01601 0.40783 1.90114
2 5IFK HPA 0.02045 0.43184 2.28137
3 2I6A 5I5 0.03074 0.4029 2.28137
4 3EF0 ALF 0.03771 0.41788 2.31214
5 4KBA 1QM 0.02885 0.41043 2.41692
6 3PDT ADP 0.02701 0.4119 2.54545
7 2VN9 GVD 0.02966 0.42047 2.65781
8 4G17 0VN 0.02096 0.4175 2.6616
9 1U59 STU 0.01961 0.41244 2.6616
10 2YN4 39J 0.01036 0.44997 2.9661
11 3CBC DBS 0.01111 0.44666 3.0303
12 2ZWI C5P 0.0328 0.41437 3.04183
13 3BJE URA 0.04378 0.41141 3.04183
14 1V59 NAD 0.0368 0.40827 3.04183
15 2DX7 CIT 0.03478 0.40629 3.07018
16 5A7Y SAH 0.004948 0.46261 3.20513
17 1XNG ATP 0.003771 0.44345 3.35821
18 1GPM AMP 0.0002875 0.52459 3.42205
19 5HX8 66P 0.01098 0.40463 3.42205
20 2OQ2 A3P 0.00195 0.44961 3.44828
21 4IDT T28 0.007474 0.43638 3.46821
22 4BG4 ADP 0.03093 0.40277 3.46821
23 2BES RES 0.0417 0.40542 3.48837
24 4Z4P SAH 0.0155 0.4207 3.61446
25 5A07 GDP 0.006044 0.45328 3.75723
26 1F6D UDP 0.0183 0.42786 3.75723
27 5LB3 ADP 0.02343 0.42606 3.75723
28 3HQ9 OXL 0.04461 0.40765 3.76812
29 1U6R IOM 0.01333 0.44727 3.80228
30 2WSI FAD 0.002411 0.44541 3.80228
31 4XBT 3ZQ 0.04118 0.4057 3.87097
32 3BBH SFG 0.01477 0.41842 3.90244
33 3BOF HCS 0.0269 0.42889 4.04624
34 1Q8A HCS 0.03604 0.42162 4.04624
35 1S4P GDP 0.005172 0.45241 4.18251
36 5TH5 MET 0.04564 0.41398 4.18251
37 1S4P MMA 0.01238 0.40487 4.18251
38 4YJK URA 0.04693 0.41246 4.36508
39 2QGI UDP 0.04853 0.41468 4.43548
40 5EXK MET 0.03762 0.41899 4.56274
41 1JLX GAL A2G MBN 0.04785 0.41294 4.56274
42 4Z9D NAD 0.001991 0.45281 4.57143
43 3ACA 8DD 0.02267 0.40088 4.59184
44 3BGD SAH 0.01898 0.4072 4.61538
45 3LXN MI1 0.011 0.41828 4.62428
46 3RK1 ATP 0.002535 0.46383 4.64135
47 3ZF8 GDP 0.002867 0.47034 4.94297
48 4DXD 9PC 0.009769 0.42068 4.94297
49 5KJW 53C 0.03752 0.41657 4.94297
50 3R4S SIA 0.04568 0.40112 4.94297
51 2BZG SAH 0.01608 0.41353 5.17241
52 1Q19 APC 0.0008279 0.46657 5.20231
53 4CNK MEU 0.03458 0.41711 5.20231
54 2W5Z SAH 0.03075 0.41234 5.20833
55 3W9Z FMN 0.02289 0.4062 5.2795
56 3GYQ SAM 0.007722 0.42869 5.32319
57 1K27 MTM 0.02512 0.40149 5.32319
58 5KO1 6UY 0.04015 0.40007 5.32319
59 4WOV 3SM 0.04482 0.40377 5.49133
60 3FIU AMP 0.004326 0.46094 5.62249
61 3GGF GVD 0.01938 0.42277 5.64784
62 1GVF PGH 0.01626 0.43906 5.70342
63 4L77 CNL 0.04812 0.41268 5.70342
64 1L5Y BEF 0.00407 0.46094 5.80645
65 2BOS GLA GAL GLC NBU 0.00062 0.52329 5.88235
66 2BOS GLA GAL GLC 0.0006415 0.52249 5.88235
67 3NK7 SAM 0.005402 0.43266 6.08365
68 1MXI SAH 0.005932 0.43412 6.25
69 2DW7 SRT 0.04639 0.40982 6.46388
70 3KC1 2T6 0.02267 0.40641 6.46388
71 2GEK GDP 0.04514 0.40361 6.46388
72 2A8Y MTA 0.02305 0.40324 6.46388
73 1Z82 G3P 0.03681 0.41924 6.56716
74 5AX9 4KT 0.01009 0.42994 6.84411
75 5T0K SAM 0.01451 0.41881 6.84411
76 2WU6 DKI 0.008031 0.4186 6.84411
77 4UCI ADN 0.04586 0.40629 6.84411
78 4U44 3D9 0.03235 0.40182 6.84411
79 2QBU SAH 0.007327 0.42977 6.89655
80 4HY1 19X 0.02948 0.4133 6.93642
81 3K5I ADP 0.0238 0.40259 6.94789
82 2WEI VGG 0.01761 0.42134 6.96864
83 3HNA SAH 0.02764 0.41138 6.96864
84 4WNP 3RJ 0.04326 0.40142 6.96864
85 3SWC SAH 0.02908 0.40409 7.01754
86 5HQ0 LZ9 0.01504 0.41194 7.14286
87 5F7J ADE 0.008928 0.45462 7.1875
88 5AHO TLA 0.007834 0.45118 7.22433
89 2P69 PLP 0.009477 0.4545 7.22543
90 3FWN 6PG 0.01786 0.40844 7.22543
91 5EWK P34 0.008075 0.457 7.5
92 3DER ALA LYS 0.02636 0.40051 7.98479
93 1JGT CMA 0.0006118 0.44535 8.36502
94 1JGT APC 0.0007804 0.43831 8.36502
95 2F57 23D 0.03254 0.40776 8.36502
96 1XVB BHL BHL 0.02295 0.43153 8.3815
97 1V3S ATP 0.0202 0.40593 8.62069
98 1KC7 PPR 0.0435 0.40718 8.74525
99 3VP6 HLD 0.01251 0.40469 8.74525
100 2A5F NAD 0.0263 0.41248 8.80829
101 2E0N SAH 0.01063 0.42536 8.95954
102 3DZ6 M8E 0.01768 0.41156 8.98876
103 1SBR VIB 0.03604 0.41976 9
104 2JAR UMP 0.02486 0.40449 9
105 4B1L FRU 0.0127 0.43484 9.09091
106 4HPP GLU 0.0453 0.40947 9.12547
107 5CK5 GDP 0.03648 0.41555 9.17722
108 2ZSC BTN 0.03808 0.40427 9.21986
109 5N53 8NB 0.04613 0.41336 9.23077
110 5H5F SAM 0.005517 0.42592 9.40171
111 1PA9 CSN 0.009242 0.43551 9.5057
112 3FUU ADN 0.02046 0.40568 9.5057
113 4URN NOV 0.01986 0.43625 9.77778
114 1SS4 GSH 0.008479 0.42918 9.80392
115 3I0O ADP 0.03094 0.41572 9.82659
116 3F7Z 34O 0.01637 0.41626 9.88593
117 2PNZ 5GP 0.004254 0.47063 10.8434
118 4BAE RWX 0.02512 0.42054 11.7073
119 4HZ0 1AV 0.007011 0.46007 11.7371
120 5MX4 HPA 0.01658 0.43426 12.4464
121 2BKK ADP 0.03261 0.41101 12.5
122 4D4U FUC GAL 0.02356 0.41728 12.5475
123 5TVF CGQ 0.03824 0.40739 12.9412
124 1S7N COA 0.008478 0.42048 13.1868
125 1WQ1 AF3 0.04267 0.41196 13.253
126 1S14 NOV 0.04242 0.41578 13.4021
127 2WZ5 MET 0.02174 0.42271 14.3791
128 4DSU BZI 0.006231 0.46417 15.873
129 5T8U LPA 0.04808 0.40217 15.896
130 1MJH ATP 0.000001522 0.59116 16.0494
131 4P8O 883 0.0276 0.42218 17.1123
132 1P9P SAH 0.01312 0.40902 17.2414
133 3SAO DBH 0.003051 0.47872 17.5
134 4KQ6 DLZ 0.0339 0.41013 21.229
135 2CJU PHX 0.0229 0.4333 23.1405
136 1WAP TRP 0.01625 0.41968 25.3333
137 3AVR OGA 0.04731 0.41492 31.8182
138 1EFV AMP 0.000001615 0.44784 47.619
139 1EFV FAD 0.000002362 0.44298 47.619
140 1O94 AMP 0.000000000008707 0.85201 49.0494
141 1O97 AMP 0.000001669 0.45108 49.0494
142 1O97 FAD 0.000001669 0.45108 49.0494
Pocket No.: 3; Query (leader) PDB : 4L2I; Ligand: FAD; Similar sites found: 111
This union binding pocket(no: 3) in the query (biounit: 4l2i.bio1) has 36 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1ZOS MTM 0.02177 0.40192 2.17391
2 5IFK HPA 0.01463 0.43184 2.28137
3 3EF0 ALF 0.02767 0.41788 2.31214
4 4KBA 1QM 0.02113 0.40899 2.41692
5 4CM4 4NR 0.03704 0.4123 2.43056
6 3PDT ADP 0.01846 0.4119 2.54545
7 2YN4 39J 0.008078 0.44772 2.9661
8 2ZWI C5P 0.02294 0.41437 3.04183
9 3BJE URA 0.03197 0.41141 3.04183
10 2DX7 CIT 0.02396 0.40629 3.07018
11 5A7Y SAH 0.004312 0.45662 3.20513
12 1XNG ATP 0.006391 0.42359 3.35821
13 1GPM AMP 0.0001909 0.52459 3.42205
14 1BYG STU 0.008204 0.42926 3.42205
15 2F5X ASP 0.04691 0.40598 3.42205
16 2OQ2 A3P 0.001374 0.44669 3.44828
17 4IDT T28 0.01594 0.41161 3.46821
18 2BES RES 0.02914 0.40542 3.48837
19 5A07 GDP 0.004188 0.45244 3.75723
20 5LB3 ADP 0.01636 0.42606 3.75723
21 1B57 PGH 0.03022 0.40815 3.75723
22 2WSI FAD 0.001744 0.44209 3.80228
23 1U6R IOM 0.02778 0.41788 3.80228
24 4XBT 3ZQ 0.02876 0.4057 3.87097
25 4XBT FLC 0.02553 0.40492 3.87097
26 3BBH SFG 0.01224 0.41376 3.90244
27 4FK7 P34 0.01212 0.43843 3.93013
28 1Q8A HCS 0.04311 0.40978 4.04624
29 5F7U GLC GLC GLC GLC 0.03606 0.4078 4.04624
30 1S4P GDP 0.003714 0.45052 4.18251
31 5TH5 MET 0.04153 0.40927 4.18251
32 2QS8 MET 0.04406 0.40314 4.18251
33 3L8G GMB 0.02431 0.42108 4.27807
34 4M6T SAM 0.02473 0.41265 4.37158
35 2QGI UDP 0.03627 0.41408 4.43548
36 4Z9D NAD 0.005366 0.4237 4.57143
37 3LXN MI1 0.008425 0.41483 4.62428
38 3RK1 ATP 0.001622 0.46383 4.64135
39 3ZF8 GDP 0.001907 0.46999 4.94297
40 5T8O 76Z 0.015 0.40346 4.94297
41 3R4S SIA 0.03402 0.40112 4.94297
42 1Q19 APC 0.0005393 0.46467 5.20231
43 4CNK MEU 0.02608 0.41711 5.20231
44 3GYQ SAM 0.005959 0.42499 5.32319
45 3FIU AMP 0.006396 0.44299 5.62249
46 1GVF PGH 0.01135 0.43906 5.70342
47 2DKD NG1 0.02208 0.41916 5.70342
48 3KN5 ANP 0.02573 0.40816 5.70342
49 1L5Y BEF 0.008086 0.43756 5.80645
50 2RIO ADP 0.02751 0.40012 6.06936
51 3NK7 SAM 0.003834 0.4303 6.08365
52 1MXI SAH 0.005112 0.42806 6.25
53 4OUC 5ID 0.01513 0.41617 6.46388
54 3KC1 2T6 0.01695 0.40399 6.46388
55 2CJZ PTR 0.0212 0.41475 6.55738
56 1Z82 G3P 0.02628 0.41924 6.56716
57 1Z82 G3H 0.04333 0.40733 6.56716
58 2IMG MLT 0.04722 0.40794 6.62252
59 3ZDS HQ9 0.03945 0.40986 6.84411
60 3BFV ADP 0.03153 0.40719 6.84411
61 4UCI ADN 0.03415 0.40629 6.84411
62 2WU6 DKI 0.01318 0.40034 6.84411
63 4HY1 19X 0.02038 0.4133 6.93642
64 2WEI VGG 0.01451 0.41707 6.96864
65 5F7J ADE 0.02108 0.42467 7.1875
66 5AHO TLA 0.03301 0.40912 7.22433
67 3SRV S19 0.02608 0.40124 7.22433
68 2P69 PLP 0.0274 0.42108 7.22543
69 3LHS SF8 0.04369 0.40714 7.43243
70 5EWK P34 0.005589 0.457 7.5
71 5VQ4 HCA 0.0188 0.42857 7.60456
72 4OOE FOM 0.02678 0.40389 7.60456
73 1JGT CMA 0.0003267 0.44553 8.36502
74 1JGT APC 0.0004163 0.43848 8.36502
75 2F57 23D 0.02361 0.4066 8.36502
76 3I54 CMP 0.02528 0.4019 8.43373
77 1V3S ATP 0.01407 0.40473 8.62069
78 1KC7 PPR 0.03205 0.40718 8.74525
79 2E0N SAH 0.0109 0.41613 8.95954
80 1SBR VIB 0.02576 0.41971 9
81 4B1L FRU 0.00916 0.43484 9.09091
82 5CK5 GDP 0.03437 0.40892 9.17722
83 2ZSC BTN 0.02632 0.40427 9.21986
84 1PA9 CSN 0.006124 0.43551 9.5057
85 4URN NOV 0.01406 0.43625 9.77778
86 2PNZ 5GP 0.005456 0.4587 10.8434
87 1WK9 TSB 0.03666 0.40033 10.9589
88 4BAE RWX 0.01386 0.42568 11.7073
89 4HZ0 1AV 0.004936 0.46007 11.7371
90 4V2O CLQ 0.0393 0.40581 12.1951
91 5TWJ SAM 0.006048 0.42135 12.3457
92 5MX4 HPA 0.01179 0.43426 12.4464
93 5TVF CGQ 0.02664 0.40739 12.9412
94 1S7N COA 0.008985 0.41357 13.1868
95 1WQ1 AF3 0.03113 0.41196 13.253
96 1S14 NOV 0.02322 0.42217 13.4021
97 2FN8 RIP 0.04942 0.40566 14.0684
98 4DSU BZI 0.008716 0.44578 15.873
99 1MJH ATP 0.0000007481 0.59116 16.0494
100 4P8O 883 0.01936 0.42218 17.1123
101 4C2W ANP 0.0412 0.40111 17.3077
102 3SAO DBH 0.02346 0.42135 17.5
103 4KQ6 DLZ 0.02621 0.40775 21.229
104 2CJU PHX 0.01659 0.4333 23.1405
105 1WAP TRP 0.01152 0.41841 25.3333
106 1XXA ARG 0.0392 0.40973 29.4872
107 1EFV AMP 0.0000001056 0.44784 47.619
108 1EFV FAD 0.0000001551 0.44298 47.619
109 1O94 AMP 0.000000000003139 0.85201 49.0494
110 1O97 FAD 0.0000001119 0.45108 49.0494
111 1O97 AMP 0.0000001119 0.45108 49.0494
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