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- Structure Biounit | Ligand Information
- PDB : .ZIP | .CSV
- Family 90% : .ZIP | .CSV
- Class : .ZIP | .CSV
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 3 families. | |||||
1 | 4JZ9 | - | CIT | C6 H8 O7 | C(C(=O)O)C.... |
2 | 4JZ8 | - | CIT | C6 H8 O7 | C(C(=O)O)C.... |
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 1 families. | |||||
1 | 4JZ9 | - | CIT | C6 H8 O7 | C(C(=O)O)C.... |
2 | 4JZ8 | - | CIT | C6 H8 O7 | C(C(=O)O)C.... |
3 | 1E19 | - | ADP | C10 H15 N5 O10 P2 | c1nc(c2c(n.... |
4 | 2WE5 | - | ADP | C10 H15 N5 O10 P2 | c1nc(c2c(n.... |
This union binding pocket(no: 1) in the query (biounit: 4jz8.bio1) has 12 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
1 | 1S8F | GDP | 1.12994 |
2 | 3PFD | FDA | 1.57729 |
3 | 3WG6 | NDP | 1.62866 |
4 | 5TUF | TDC | 1.89274 |
5 | 4FWE | FAD | 1.89274 |
6 | 3WGT | FAD | 1.89274 |
7 | 3WGT | QSC | 1.89274 |
8 | 5TUF | FAD | 1.89274 |
9 | 1PVN | MZP | 1.89274 |
10 | 5MZI | FYK | 1.89274 |
11 | 5MZI | FAD | 1.89274 |
12 | 2Y6Q | I7T | 1.89274 |
13 | 2QA1 | FAD | 1.89274 |
14 | 2BIF | SIN | 1.89274 |
15 | 2BIF | ANP | 1.89274 |
16 | 3QVP | FAD | 1.89274 |
17 | 2Y6Q | FAD | 1.89274 |
18 | 1YKJ | FAD | 1.89274 |
19 | 1OJ4 | ANP | 2.12014 |
20 | 1I9G | SAM | 2.14286 |
21 | 1BZL | FAD | 2.2082 |
22 | 1VDC | FAD | 2.2082 |
23 | 4JDR | FAD | 2.2082 |
24 | 2J0V | GDP | 2.35849 |
25 | 1LBZ | FBP | 2.38095 |
26 | 2IID | PHE | 2.52366 |
27 | 5EOW | FAD | 2.52366 |
28 | 2IID | FAD | 2.52366 |
29 | 4YKG | FAD | 2.52366 |
30 | 1SQK | ADP | 2.52366 |
31 | 5XVR | TRH | 2.52366 |
32 | 4M37 | SAH | 2.52366 |
33 | 2X7J | TPP | 2.52366 |
34 | 2C29 | NAP | 2.52366 |
35 | 1WPY | BTN | 2.55319 |
36 | 1QSM | ACO | 2.63158 |
37 | 1U3G | THF | 2.6455 |
38 | 1LPD | ADE | 2.75591 |
39 | 1X1R | GDP | 2.80899 |
40 | 1RP0 | AHZ | 2.8169 |
41 | 5YU3 | NAD | 2.83912 |
42 | 5YU3 | PRO | 2.83912 |
43 | 4C3Y | ANB | 2.83912 |
44 | 4C3Y | FAD | 2.83912 |
45 | 1M7G | ADX | 2.8436 |
46 | 2OFW | ADX | 2.88462 |
47 | 2Q4V | ACO | 2.94118 |
48 | 2IYL | GDP | 3.15457 |
49 | 3B8Y | ADA ADA ADA ADA | 3.15457 |
50 | 5CK5 | GDP | 3.16456 |
51 | 3GJX | GTP | 3.24074 |
52 | 5TB5 | GDP | 3.24324 |
53 | 5TAR | GDP | 3.24324 |
54 | 2PEZ | DAT | 3.35196 |
55 | 2PEZ | GGZ | 3.35196 |
56 | 5IDM | ANP | 3.35196 |
57 | 4DDY | DN6 | 3.42205 |
58 | 4N70 | 2HX | 3.47003 |
59 | 6H3O | FAD | 3.47003 |
60 | 4K5S | PM0 | 3.47003 |
61 | 4K5S | FAD | 3.47003 |
62 | 5HR5 | ADP | 3.47003 |
63 | 5TTJ | FAD | 3.47003 |
64 | 6CD1 | PLG | 3.47003 |
65 | 2ZKJ | ADP | 3.47003 |
66 | 4H1V | GNP | 3.47003 |
67 | 3G5D | 1N1 | 3.4965 |
68 | 1NJR | XYL | 3.52113 |
69 | 5O2T | GSP | 3.5503 |
70 | 1NLI | ADE | 3.62903 |
71 | 3FUR | Z12 | 3.67647 |
72 | 2IVD | FAD | 3.78549 |
73 | 2F5Z | FAD | 3.78549 |
74 | 1T3Q | MCN | 3.78549 |
75 | 5EXW | 7DT | 3.78549 |
76 | 3IE3 | N11 | 3.82775 |
77 | 2DXU | BT5 | 3.82979 |
78 | 3A4M | ADP | 3.84615 |
79 | 3GJ0 | GDP | 4.0724 |
80 | 3GJ5 | GDP | 4.0724 |
81 | 4YSW | NAI | 4.10095 |
82 | 4YSW | FAD | 4.10095 |
83 | 3X0V | FAD | 4.10095 |
84 | 5Y6Q | FAD | 4.10095 |
85 | 1IBR | GNP | 4.16667 |
86 | 4HAT | GNP | 4.16667 |
87 | 5BXQ | GDP | 4.16667 |
88 | 2WJH | FLC | 4.21687 |
89 | 2WJH | GDP | 4.21687 |
90 | 1I1D | 16G | 4.34783 |
91 | 3HVJ | 705 | 4.52489 |
92 | 4Z24 | FAD | 4.73186 |
93 | 5LP1 | 71H | 4.73186 |
94 | 2V2V | V12 | 4.79705 |
95 | 5FVJ | ACO | 4.81928 |
96 | 5JPH | COA | 4.86111 |
97 | 5UWU | GNP | 4.8951 |
98 | 5DIF | GNP | 4.8951 |
99 | 5DHF | GNP | 4.8951 |
100 | 5UWH | GNP | 4.8951 |
101 | 5UWT | GNP | 4.8951 |
102 | 5UWI | GNP | 4.8951 |
103 | 5UWJ | GNP | 4.8951 |
104 | 6CIT | GNP | 4.8951 |
105 | 5UWP | GNP | 4.8951 |
106 | 5DI9 | GNP | 4.8951 |
107 | 5UWQ | GNP | 4.8951 |
108 | 5UWW | GNP | 4.8951 |
109 | 5UWR | GNP | 4.8951 |
110 | 5UWO | GNP | 4.8951 |
111 | 4PYA | 2X3 | 4.96894 |
112 | 5O74 | GDP | 5 |
113 | 1C0I | FAD | 5.04732 |
114 | 1C0I | BE2 | 5.04732 |
115 | 4RZ3 | ADP | 5.08475 |
116 | 1WA5 | GTP | 5.11364 |
117 | 3R96 | AMP | 5.31915 |
118 | 3R96 | ACO | 5.31915 |
119 | 5G5G | FAD | 5.36278 |
120 | 3NRZ | FAD | 5.36278 |
121 | 1V97 | FAD | 5.36278 |
122 | 1FIQ | FAD | 5.36278 |
123 | 2R4J | FAD | 5.36278 |
124 | 2R4J | 13P | 5.36278 |
125 | 1QHG | ATP | 5.36278 |
126 | 5G5G | MCN | 5.36278 |
127 | 2ZPA | ADP | 5.36278 |
128 | 6CS8 | F9Y | 5.61056 |
129 | 1RYI | GOA | 5.67823 |
130 | 1RYI | FAD | 5.67823 |
131 | 4YSX | FAD | 5.85106 |
132 | 1Z2A | GDP | 5.95238 |
133 | 2E5V | FAD | 5.99369 |
134 | 4GNI | ATP | 5.99369 |
135 | 3VX3 | ADP | 6.04839 |
136 | 3GJ7 | GDP | 6.12245 |
137 | 1H9G | COA MYR | 6.17284 |
138 | 2CJW | GDP | 6.25 |
139 | 2B4B | COA | 6.43275 |
140 | 4K81 | GTP | 6.43275 |
141 | 3DEF | GDP | 6.48855 |
142 | 1S7N | COA | 6.59341 |
143 | 1L3I | SAH | 6.77083 |
144 | 1UI0 | URA | 6.82927 |
145 | 1WWZ | ACO | 6.91824 |
146 | 1Q9I | FAD | 6.94006 |
147 | 1Q9I | TEO | 6.94006 |
148 | 1QO8 | FAD | 6.94006 |
149 | 5LJW | ANP | 6.94006 |
150 | 4IPE | ANP | 7.25552 |
151 | 4IVG | ANP | 7.25552 |
152 | 1WQ1 | GDP | 7.25552 |
153 | 2RHO | GSP | 7.25552 |
154 | 5HSA | FAS | 7.57098 |
155 | 3HIW | C2X | 7.72201 |
156 | 5L3W | GDP | 8.16993 |
157 | 5TS5 | FAD | 8.20189 |
158 | 5L3S | GNP | 8.44595 |
159 | 3C56 | PH4 | 8.79479 |
160 | 1OFD | AKG | 8.83281 |
161 | 1OFD | FMN | 8.83281 |
162 | 4GUT | FAD | 8.87097 |
163 | 4HSU | FAD | 8.87097 |
164 | 4GUS | FAD | 8.87097 |
165 | 5L3R | GCP | 8.87372 |
166 | 2Z6I | FMN | 9.14826 |
167 | 2R75 | 01G | 9.1716 |
168 | 1FFU | CDP | 9.20245 |
169 | 2J5V | PCA | 9.46372 |
170 | 1X6V | ADP | 9.46372 |
171 | 5B48 | TDN | 9.83607 |
172 | 6CUZ | FEV | 10.4101 |
173 | 3ITJ | FAD | 10.7256 |
174 | 5ODQ | FAD | 10.7256 |
175 | 4KVA | GTP | 10.7256 |
176 | 4J56 | FAD | 10.7256 |
177 | 2QXL | ATP | 10.7256 |
178 | 3SFV | GDP | 11.0497 |
179 | 3QFA | FAD | 11.2069 |
180 | 4UA3 | COA | 11.3402 |
181 | 3CH5 | GDP | 11.5385 |
182 | 2IYA | UDP | 11.6719 |
183 | 5OF9 | ANP | 11.6719 |
184 | 1FDJ | 2FP | 11.6719 |
185 | 3M1I | GTP | 12.3288 |
186 | 3WYF | GTP | 12.3288 |
187 | 4UP3 | FAD | 12.4204 |
188 | 2GKS | ADP | 12.6183 |
189 | 2RGH | FAD | 12.9338 |
190 | 2RGO | FAD | 12.9338 |
191 | 2GAG | FOA | 13.1313 |
192 | 3WYG | GTP | 14.8352 |
193 | 3GJ4 | GDP | 18.1818 |
194 | 3GJ3 | GDP | 18.1818 |
195 | 3KJI | ADP | 19.2913 |
196 | 1V0C | KNC | 19.802 |
197 | 1V0C | ACO | 19.802 |
198 | 3GJ8 | GDP | 21.7391 |
This union binding pocket(no: 2) in the query (biounit: 4jz8.bio1) has 13 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
1 | 1ITU | CIL | 1.57729 |
2 | 1EZ0 | NAP | 1.57729 |
3 | 1V59 | FAD | 1.89274 |
4 | 3H7R | NAP | 1.89274 |
5 | 5HS2 | CTP | 2.15517 |
6 | 1PN0 | FAD | 2.2082 |
7 | 1PN0 | IPH | 2.2082 |
8 | 5LY3 | ADP | 2.2082 |
9 | 4UUG | PXG | 2.2082 |
10 | 5Y72 | DST | 2.2082 |
11 | 6G34 | 5ID | 2.2409 |
12 | 3QUR | ADP | 2.44755 |
13 | 3QUR | FM4 | 2.44755 |
14 | 2A14 | SAH | 2.6616 |
15 | 1H74 | ADP | 2.7027 |
16 | 1D4O | NAP | 2.71739 |
17 | 2VAP | GDP | 2.83912 |
18 | 4L1F | FAD | 2.83912 |
19 | 1M7G | AV2 | 2.8436 |
20 | 4IEN | GDP | 3.06748 |
21 | 4RGQ | 13P | 3.15457 |
22 | 4RGQ | NDP | 3.15457 |
23 | 1CER | NAD | 3.15457 |
24 | 5EIB | GTP | 3.15457 |
25 | 2EXK | XYS XYS | 3.15457 |
26 | 4LNU | GTP | 3.15457 |
27 | 6FCH | PRP | 3.37079 |
28 | 1EU1 | MGD | 3.47003 |
29 | 4CJX | NAP | 3.78549 |
30 | 3IE3 | GSH | 3.82775 |
31 | 5O4F | 8VE | 3.87597 |
32 | 3LL5 | ADP | 4.01606 |
33 | 3LL5 | IPE | 4.01606 |
34 | 1EZ4 | NAD | 4.4164 |
35 | 3VEH | 0GA | 4.4164 |
36 | 1I0B | PEL | 4.73186 |
37 | 3CMC | NAD | 4.73186 |
38 | 3IHG | FAD | 4.73186 |
39 | 4TQK | NAG | 4.73186 |
40 | 2PLK | P3D | 5.04732 |
41 | 2VG1 | FPP | 5.26316 |
42 | 3KPB | SAM | 5.7377 |
43 | 5ZAI | COA | 5.79151 |
44 | 1PUA | COA | 6.13497 |
45 | 1OFU | GDP | 6.94006 |
46 | 5M3E | APR | 7.27273 |
47 | 3VC3 | C6P | 7.57098 |
48 | 5FB3 | NDP | 7.88644 |
49 | 4EHU | ANP | 8.69565 |
50 | 2Q0L | FAD | 9.00322 |
51 | 3RYC | GTP | 9.09091 |
52 | 1GS5 | NLG | 9.30233 |
53 | 1GS5 | ANP | 9.30233 |
54 | 3K56 | IS3 | 9.3985 |
55 | 2ZGY | GDP | 12.9338 |
56 | 3NY4 | SMX | 13.9623 |
57 | 2PBD | ATP | 18.6047 |
This union binding pocket(no: 3) in the query (biounit: 4jz8.bio2) has 12 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
1 | 2FZW | NAD | 1.26183 |
2 | 2YCH | ATP | 1.89274 |
3 | 4RI1 | ACO | 2.15054 |
4 | 1YB5 | NAP | 2.2082 |
5 | 4ONA | UW1 | 2.2082 |
6 | 3QV1 | NAD | 2.43902 |
7 | 2YG3 | FAD | 2.52366 |
8 | 4ZSY | RW2 | 2.52366 |
9 | 5C9P | FUC | 2.52366 |
10 | 4LAE | 1VM | 2.99401 |
11 | 4LAE | NAP | 2.99401 |
12 | 1XHL | NDP | 3.0303 |
13 | 5BJX | UDP | 3.15457 |
14 | 2QWO | ADP | 3.26087 |
15 | 1T9D | FAD | 3.47003 |
16 | 1T9D | 1MM | 3.47003 |
17 | 1T9D | P25 | 3.47003 |
18 | 1T9D | PYD | 3.47003 |
19 | 3HBN | UDP | 3.5461 |
20 | 4ZUL | UN1 | 3.78549 |
21 | 6BSX | E7S | 3.78549 |
22 | 6BSX | GDP | 3.78549 |
23 | 5ESO | ISC | 3.78549 |
24 | 5ESO | TDP | 3.78549 |
25 | 4CE5 | PDG | 4.10095 |
26 | 4CRZ | ACO | 4.37956 |
27 | 3LU1 | NAD | 4.4164 |
28 | 5EOU | ATP | 4.4164 |
29 | 1ON3 | MCA | 4.4164 |
30 | 2DT3 | NAG NAG NAG NAG NAG NAG | 5.04732 |
31 | 3W2W | ATP | 5.04732 |
32 | 6F97 | FAD | 5.67823 |
33 | 4ZY1 | 4U5 | 5.99369 |
34 | 1NV8 | SAM | 6.69014 |
35 | 2BES | RES | 6.97674 |
36 | 2RHO | GDP | 7.25552 |
37 | 2HMT | NAI | 7.25552 |
38 | 2YVJ | NAI | 7.33945 |
39 | 4V15 | PLP | 7.57098 |
40 | 5ODQ | 9SB | 10.7256 |
41 | 4CBX | ATP | 12.5984 |
42 | 4CVN | ADP | 14.5985 |
This union binding pocket(no: 4) in the query (biounit: 4jz8.bio2) has 11 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
1 | 1DRV | A3D | 1.0989 |
2 | 4MOB | COA | 1.57729 |
3 | 2IHT | TPP | 1.57729 |
4 | 1UPA | TPP | 1.57729 |
5 | 1I52 | CTP | 1.69492 |
6 | 5YJF | 8WO | 1.76056 |
7 | 5AK0 | 8V1 | 1.89274 |
8 | 1NJJ | ORX | 1.89274 |
9 | 3RG9 | WRA | 2.08333 |
10 | 1PHP | ADP | 2.2082 |
11 | 5EIN | NAP | 2.2082 |
12 | 2NVK | FAD | 2.2082 |
13 | 2BVD | ISX | 2.4735 |
14 | 3ZNN | FAD | 2.52366 |
15 | 3ZNN | 4WL | 2.52366 |
16 | 5J60 | FAD | 2.52366 |
17 | 5V7I | 8Z1 | 2.52366 |
18 | 2RFZ | CTR | 2.52366 |
19 | 1O0S | NAI | 2.52366 |
20 | 2Q3O | FMN | 2.52366 |
21 | 5X20 | NAD | 2.5641 |
22 | 5BVE | 4VG | 2.83912 |
23 | 4M7V | NAP | 2.85714 |
24 | 2HQM | FAD | 3.15457 |
25 | 2GZ3 | NAP | 3.15457 |
26 | 1RJ9 | GCP | 3.15457 |
27 | 4LNU | GDP | 3.15457 |
28 | 1G0H | IPD | 3.1746 |
29 | 5WKC | FAD | 3.47003 |
30 | 1XUJ | BOZ | 3.58744 |
31 | 1YF4 | CYS TYR PHE GLN ASN CYS PRO ARG GLY NH2 | 3.58744 |
32 | 1AKY | AP5 | 3.63636 |
33 | 2OBF | F83 | 3.80623 |
34 | 2OBF | SAH | 3.80623 |
35 | 3VZS | NAP | 3.89105 |
36 | 5MZY | 8EZ | 4.03226 |
37 | 2VHW | NAI | 4.10095 |
38 | 3A5Z | KAA | 4.10095 |
39 | 1PJS | NAD | 4.10095 |
40 | 2BNF | UTP | 4.14938 |
41 | 1I1D | COA | 4.34783 |
42 | 2XAU | ADP | 4.4164 |
43 | 3CIP | ATP | 4.6875 |
44 | 5H68 | AGS | 4.73186 |
45 | 5N0J | FAD | 4.73186 |
46 | 3UH0 | TSB | 4.73186 |
47 | 1GZ4 | ATP | 4.73186 |
48 | 2B9W | FAD | 4.95283 |
49 | 1KEV | NDP | 5.04732 |
50 | 6G96 | ACO | 5.11364 |
51 | 3RJ5 | NAD | 5.11811 |
52 | 2XWL | CTP | 5.38117 |
53 | 1QF9 | C5P | 5.6701 |
54 | 1QF9 | ADP | 5.6701 |
55 | 1QF9 | ALF | 5.6701 |
56 | 1X54 | 4AD | 6.30915 |
57 | 1W5F | G2P | 6.30915 |
58 | 1RM4 | NDP | 6.30915 |
59 | 5T67 | JHZ | 6.94006 |
60 | 2Q7V | FAD | 6.94006 |
61 | 5T67 | SAH | 6.94006 |
62 | 1REO | FAD | 7.25552 |
63 | 2VVL | FAD | 7.25552 |
64 | 2I3G | NAP | 7.57098 |
65 | 2XGT | NSS | 7.57098 |
66 | 5NUF | NAD | 8.51735 |
67 | 2NVA | PL2 | 8.83281 |
68 | 1TH8 | ADP | 9.65517 |
69 | 3KTA | AP5 | 9.82659 |
70 | 1GKZ | ADP | 10.0946 |
71 | 1NZY | BCA | 10.4089 |
72 | 1JXZ | BCA | 10.4089 |
73 | 1RQ2 | CIT | 10.9948 |
74 | 1S7G | NAD | 11.0672 |
75 | 2Q8Z | NUP | 11.4035 |
76 | 3GDH | SAH | 11.6183 |
77 | 1JA9 | PYQ | 12.4088 |
78 | 4A62 | ANP | 12.9338 |