-->
Receptor
PDB id Resolution Class Description Source Keywords
4IDN 2.25 Å EC: 3.6.5.- HUMAN ATLASTIN-1 1-446, C-HIS6, GPPNHP HOMO SAPIENS GTPASE GTP/GDP BINDING HYDROLASE
Ref.: STRUCTURAL BASIS FOR CONFORMATIONAL SWITCHING AND G LOADING OF THE LARGE G PROTEIN ATLASTIN. EMBO J. V. 32 369 2013
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MG B:502;
A:502;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
GNP A:501;
B:501;
Valid;
Valid;
none;
none;
Kd = 5.77 uM
522.196 C10 H17 N6 O13 P3 c1nc2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4IDN 2.25 Å EC: 3.6.5.- HUMAN ATLASTIN-1 1-446, C-HIS6, GPPNHP HOMO SAPIENS GTPASE GTP/GDP BINDING HYDROLASE
Ref.: STRUCTURAL BASIS FOR CONFORMATIONAL SWITCHING AND G LOADING OF THE LARGE G PROTEIN ATLASTIN. EMBO J. V. 32 369 2013
Members (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 8 families.
1 6B9D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 6B9E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 6B9F - GDP ALF n/a n/a
4 4IDN Kd = 5.77 uM GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 4IDQ - GDP ALF n/a n/a
6 4IDO - GDP ALF n/a n/a
70% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 6B9D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 6B9E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 6B9F - GDP ALF n/a n/a
4 4IDN Kd = 5.77 uM GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 4IDQ - GDP ALF n/a n/a
6 4IDO - GDP ALF n/a n/a
7 5VGR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 6 families.
1 6B9D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 6B9E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 6B9F - GDP ALF n/a n/a
4 4IDN Kd = 5.77 uM GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 4IDQ - GDP ALF n/a n/a
6 4IDO - GDP ALF n/a n/a
7 5VGR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 132
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 9GM 1 1
3 GDP 0.839506 0.973684
4 GP3 0.82716 0.948718
5 GTP 0.809524 0.973684
6 GNH 0.807229 0.986842
7 G1R 0.77907 0.961039
8 GCP 0.77907 0.948718
9 GSP 0.770115 0.925
10 5GP 0.756098 0.960526
11 G 0.756098 0.960526
12 G2R 0.747253 0.936709
13 GMV 0.747126 0.948718
14 GAV 0.714286 0.936709
15 GP2 0.712644 0.936709
16 G2P 0.711111 0.936709
17 Y9Z 0.708333 0.880952
18 GDC 0.690722 0.936709
19 GDD 0.690722 0.936709
20 GKE 0.690722 0.936709
21 G5P 0.686869 0.948718
22 GPG 0.684211 0.936709
23 GTG 0.683673 0.91358
24 GDR 0.683673 0.936709
25 GFB 0.683673 0.936709
26 JB2 0.68 0.936709
27 GKD 0.68 0.936709
28 6CK 0.676768 0.91358
29 G3A 0.676768 0.948718
30 GDX 0.673267 0.948718
31 ALF 5GP 0.67033 0.86747
32 YGP 0.663265 0.879518
33 GPD 0.656863 0.902439
34 ALF GDP 0.645833 0.86747
35 GDP AF3 0.645833 0.86747
36 GDP ALF 0.645833 0.86747
37 JB3 0.641509 0.925
38 DBG 0.640351 0.974359
39 G3D 0.638298 0.960526
40 G4P 0.625 0.960526
41 GMP 0.621951 0.857143
42 NGD 0.62037 0.936709
43 GGM 0.618182 0.925926
44 0O2 0.616162 0.960526
45 2MD 0.603604 0.870588
46 CAG 0.60177 0.904762
47 U2G 0.590909 0.91358
48 FEG 0.590909 0.858824
49 GDP 7MG 0.590476 0.888889
50 MGD 0.587719 0.870588
51 G G 0.586538 0.924051
52 ZGP 0.585586 0.848837
53 CG2 0.580357 0.91358
54 ANP 0.568421 0.922078
55 PGD 0.567797 0.902439
56 MD1 0.567797 0.870588
57 3GP 0.56044 0.922078
58 TPG 0.558333 0.822222
59 GH3 0.55 0.948052
60 FE9 0.546219 0.778947
61 GPX 0.539216 0.922078
62 G4M 0.539062 0.860465
63 DGI 0.536082 0.9
64 BGO 0.535088 0.901235
65 IDP 0.53125 0.947368
66 DGT 0.53 0.9
67 2GP 0.526882 0.935065
68 G1R G1R 0.520325 0.901235
69 GCP G 0.518868 0.897436
70 A G 0.516949 0.911392
71 U A G G 0.512605 0.911392
72 G A A A 0.504202 0.9
73 AGO 0.504202 0.91358
74 P2G 0.5 0.860759
75 G1G 0.5 0.902439
76 R7I 0.49505 0.922078
77 MGP 0.49505 0.936709
78 R5I 0.49505 0.922078
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 AKW 0.483051 0.869048
83 DG 0.474227 0.8875
84 DGP 0.474227 0.8875
85 G U 0.466667 0.878049
86 IMP 0.463918 0.934211
87 G2Q 0.462963 0.936709
88 GPC 0.459677 0.858824
89 G C 0.459016 0.878049
90 GTA 0.448276 0.91358
91 G7M 0.444444 0.924051
92 MAP 0.439252 0.898734
93 G G G RPC 0.435484 0.853659
94 B4P 0.434343 0.871795
95 AP5 0.434343 0.871795
96 ADP 0.434343 0.896104
97 A2D 0.43299 0.871795
98 AT4 0.43 0.8625
99 G G G C 0.426357 0.890244
100 AU1 0.425743 0.922078
101 SGP 0.425743 0.807229
102 BA3 0.424242 0.871795
103 A G C C 0.423077 0.888889
104 35G 0.423077 0.909091
105 PCG 0.423077 0.909091
106 C2E 0.423077 0.897436
107 APC G U 0.421875 0.864198
108 HEJ 0.421569 0.896104
109 ATP 0.421569 0.896104
110 ACQ 0.419048 0.873418
111 5GP 5GP 0.419048 0.860759
112 5FA 0.417476 0.896104
113 AQP 0.417476 0.896104
114 01G 0.417391 0.880952
115 AN2 0.415842 0.909091
116 UNP 0.415842 0.810127
117 6AD 0.415094 0.821429
118 M33 0.411765 0.860759
119 ITT 0.411765 0.846154
120 G C C C 0.410448 0.901235
121 HFD 0.409524 0.851852
122 G U34 0.408 0.86747
123 ACP 0.407767 0.873418
124 6YZ 0.407407 0.873418
125 AR6 0.403846 0.871795
126 APR 0.403846 0.871795
127 DG DG 0.403509 0.845238
128 A4P 0.403226 0.848837
129 UCG 0.402985 0.888889
130 SAP 0.4 0.851852
131 AGS 0.4 0.851852
132 AD9 0.4 0.873418
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4IDN; Ligand: GNP; Similar sites found with APoc: 615
This union binding pocket(no: 1) in the query (biounit: 4idn.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
1 2XT3 ADP 1.16279
2 4Y4V DAL 1.17994
3 4NCN GTP 1.31291
4 1XP8 AGS 1.36612
5 1FP6 ADP 1.38408
6 1VKJ A3P 1.40351
7 1XKV ATP 1.51229
8 1F6B GDP 1.51515
9 4IEE AGS 1.53173
10 1G41 ADP 1.57658
11 3WXM GTP 1.59574
12 4GOX A3P 1.59744
13 1NJF ADP 1.6
14 1NJF AGS 1.6
15 5FTB ANP 1.61663
16 5FHD ADP ALF 1.61663
17 4U00 ADP 1.63934
18 5JCP GDP ALF 1.67064
19 1G3Q ADP 1.68776
20 3BFX A3P 1.68919
21 3LRE ADP 1.69014
22 2QEN ADP 1.71429
23 4TMZ GSP 1.73913
24 3Q85 GNP 1.75055
25 5J1J ANP 1.75439
26 4AG5 ADP 1.78571
27 1IN4 ADP 1.79641
28 1NST A3P 1.84615
29 5WC2 ADP 1.85185
30 3ZQ6 ADP ALF 1.85185
31 6B4K ANP 1.86047
32 3EC1 GDP 1.89702
33 1HTW ADP 1.89873
34 3DEF GDP 1.9084
35 1TQ4 GDP 1.93705
36 1XMV ADP 1.96629
37 3WY9 GDP 1.96937
38 3WYA GDP 1.96937
39 1WDT GTP 1.96937
40 1IHU AF3 1.96937
41 1IHU ADP 1.96937
42 4YS0 ADP 1.96937
43 1C1X HFA 1.97183
44 6DEF GCP 2.04604
45 2O0J ADP 2.07792
46 2AWN ADP 2.09974
47 1PUJ GNP 2.12766
48 3EWA ANP 2.17391
49 2J5V PCA 2.17984
50 2FAH GDP 2.18818
51 1OYY AGS 2.18818
52 6FAA ADP 2.18818
53 3IUY AMP 2.19298
54 1W0J ADP 2.20588
55 1W0J ADP BEF 2.20588
56 1DAK ADP 2.23214
57 1DAK DPU 2.23214
58 4NZ6 DGL 2.23642
59 5XC5 GTP 2.27273
60 1MKY GDP 2.2779
61 1AQU A3P 2.3569
62 3L6C MLI 2.35988
63 5GOE GDP 2.36967
64 5ZBR ANP 2.4
65 5YV5 ADP 2.407
66 5FG3 GDP 2.407
67 3TBK ANP 2.407
68 4M9Q GNP 2.407
69 3ITJ CIT 2.407
70 2BCG GDP 2.42826
71 1KK1 GNP 2.43902
72 3DZD ADP 2.44565
73 4HSE ADP 2.51889
74 4WEI GLC GAL 2.52708
75 1SVK ALF GDP 2.54958
76 4ZNL BEF ADP 2.55474
77 3ZFD ANP 2.5641
78 4OI4 ATP 2.6087
79 3NHB ADP 2.61438
80 3RC3 ANP 2.62582
81 3P4X ADP 2.66344
82 5L3V GDP 2.67559
83 4LYA ATP 2.68336
84 1YZN GNP 2.7027
85 1G6H ADP 2.72374
86 3AI8 HNQ 2.73438
87 1Y3A GDP 2.73556
88 4DKX GDP 2.77778
89 1Z0F GDP 2.7933
90 3KIF GDL 2.83019
91 2GKS ADP 2.84464
92 4R43 GDP 2.84464
93 4WZA ADP 2.84464
94 4WZA ACP 2.84464
95 5EE7 5MV 2.84464
96 5XDR ADP 2.84464
97 4LJ9 ACP 2.84464
98 5VHC BEF ADP 2.84464
99 1BH2 GSP 2.85714
100 3FWY ADP 2.86624
101 3BOS CDP 2.89256
102 4FCW ADP 2.89389
103 1D2N ANP 2.94118
104 3FKQ ATP 2.94906
105 2IXE ATP 2.95203
106 2CBZ ATP 2.95359
107 5Y6N ADP 2.96804
108 2EW1 GNP 2.98507
109 1WF3 GNP 2.99003
110 1RRC ADP 2.99003
111 2XTN GTP 2.99145
112 3UIE ANP 3
113 2F9L GDP 3.01508
114 5E5U MLI 3.01508
115 4QOS ADP 3.01887
116 2GWH A3P 3.02013
117 5YT0 GDP 3.02198
118 5OEC GDP 3.04569
119 5TSH ADP 3.06346
120 5TSH ANP 3.06346
121 3HU3 AGS 3.06346
122 4IOK XPO 3.06346
123 4IOK ADP 3.06346
124 4XGU ADP 3.06604
125 4YDS ATP 3.07018
126 4DCT GDP 3.07018
127 1JJ7 ADP 3.07692
128 5EXT ADP 3.07692
129 3Q9L ATP 3.07692
130 2WOJ ADP ALF 3.10734
131 3ZS9 ADP ALF 3.10734
132 4RD0 GDP 3.13253
133 1OIV GDP 3.14136
134 4IHQ ADP 3.28228
135 1G7S GDP 3.28228
136 2CE7 ADP 3.28228
137 2XAU ADP 3.28228
138 2X7I CIT 3.28228
139 2WKQ GTP 3.31325
140 2Y8E GNP 3.35196
141 5JCZ GDP 3.35196
142 2OFW ADX 3.36538
143 6BSX E7S 3.37079
144 6BSX GDP 3.37079
145 5IFS ADP 3.37553
146 3BIB PSF 3.44828
147 3IO3 ADP 3.44828
148 3B7G ANP 3.47826
149 1YQT ADP 3.50109
150 4ZDJ UTP 3.50109
151 2ZJ5 ADP 3.50109
152 6CEN SAM 3.50877
153 3QKT ANP 3.53982
154 2ODE ALF GDP 3.5461
155 1OFH ADP 3.54839
156 2ZTS ADP 3.58566
157 3PQC GDP 3.58974
158 5L3W GDP 3.59477
159 1FNN ADP 3.59897
160 3BER AMP 3.61446
161 3TK1 GDP 3.63636
162 4YMU ATP 3.63636
163 1GOJ ADP 3.66197
164 1OIX GDP 3.66492
165 1Z06 GNP 3.7037
166 3PCR GTP 3.7037
167 6AU6 GDP 3.71353
168 5L3S GNP 3.71622
169 5HR5 ADP 3.71991
170 2C9O ADP 3.72807
171 1U0J ADP 3.74532
172 2J0V GDP 3.77358
173 5U32 GDP 3.81356
174 2PL3 ADP 3.81356
175 5I34 GDP 3.85488
176 4D81 ADP 3.88693
177 3KJI ADP 3.93701
178 1R6B ADP 3.93873
179 5IRN ADP 3.93873
180 5MZN ADP 3.93873
181 2GK6 ADP 3.93873
182 4JLS 3ZE 3.94737
183 2CDN ADP 3.9801
184 2ZR9 DTP 4.01146
185 3TNF GNP 4.02299
186 4LHW GNP 4.02299
187 5ZXD ATP 4.0293
188 3CPJ GDP 4.03587
189 3FYH ADP 4.03727
190 2NCD ADP 4.04762
191 1H65 GDP 4.07407
192 3DKP ADP 4.08163
193 2ZFI ADP 4.09836
194 5CK5 GDP 4.11392
195 3B5J 12D 4.11523
196 1Z08 GNP 4.11765
197 4KVA GTP 4.12621
198 4LC1 GDP 4.1543
199 1G6O ADP 4.15755
200 4ZKD GDP 4.15755
201 2QZ4 ADP 4.19847
202 4Z7X 3CX 4.20168
203 1OXV ANP 4.24929
204 5GVR LMR 4.2735
205 3QBT GNP 4.28571
206 1D5C GDP 4.32099
207 2DPY ADP 4.3379
208 3DC4 ADP 4.36047
209 3E70 GDP 4.37637
210 2FFQ GSP 4.37637
211 2FSH ANP 4.37637
212 4H1V GNP 4.37637
213 4OHY ANP 4.40835
214 4R98 GNH 4.42804
215 1E96 GTP 4.4335
216 3VX3 ADP 4.43548
217 5X40 ACP 4.45205
218 2PEZ DAT 4.46927
219 3RLF ANP 4.47368
220 4WZ6 ATP 4.48276
221 2BWN SIN 4.48878
222 4A4Z ANP 4.51354
223 4BAS GNP 4.52261
224 3T1O GDP 4.54545
225 1JI0 ATP 4.58333
226 5LTJ ADP 4.59519
227 5N69 ADP 4.59519
228 1QHG ATP 4.59519
229 2HT6 GDP 4.5977
230 1SKQ GDP 4.5977
231 2XOC ADE 4.5977
232 3T5G GDP 4.60526
233 1NF3 GNP 4.61538
234 5M7P ADP 4.62555
235 1UPT GTP 4.67836
236 5EE5 GTP 4.67836
237 2RI1 GLP 4.68085
238 1YZQ GNP 4.70588
239 5H7J GCP 4.71063
240 1A4R GDP 4.71204
241 1A4R GNH 4.71204
242 2WMO GTP 4.73684
243 4RZ3 ADP 4.74576
244 1Z2A GDP 4.7619
245 2XTZ GSP 4.80226
246 4PFO ADP 4.814
247 5UIV ADP 4.84582
248 1R4A GNP 4.84848
249 4J0Q GDP 4.84988
250 1JJV ATP 4.85437
251 5DI3 GNP 4.86486
252 4WOP CTP 4.88889
253 2QQ0 ANP 4.8913
254 2QQ0 TMP 4.8913
255 2QQ0 ADP 4.8913
256 2GDJ ANP 4.92424
257 4YC7 GNP 4.97238
258 3A4M ADP 5
259 5O74 GDP 5
260 5I0H ADP BEF 5.03282
261 2WHX ADP 5.03282
262 3EZ2 ADP 5.03282
263 1Z6T ADP 5.03282
264 1W7J ADP BEF 5.03282
265 2Z5F A3P 5.03356
266 6A20 ADP 5.03433
267 2JLR ANP 5.09978
268 1V8K ANP 5.12195
269 2FH5 GTP 5.14019
270 3NKV GNP 5.14286
271 2A5J GDP 5.2356
272 1LVK MNT BEF 5.25164
273 5G3Y ADP 5.30973
274 1VG8 GNP 5.31401
275 3U6B GDP 5.32995
276 4P3Y GDP 5.32995
277 5JBQ GDP 5.32995
278 4G5G GDP 5.32995
279 3U6K GDP 5.32995
280 1D8T GDP 5.34351
281 2BVN GNP 5.34351
282 1ZJ6 G3D 5.34759
283 1ION ADP 5.34979
284 3MD0 GDP 5.35211
285 5W7Q GDP 5.36193
286 4LPS GDP 5.3719
287 5LB3 ADP 5.39326
288 1RYH GNP 5.41872
289 3GJ4 GDP 5.42986
290 3GJ5 GDP 5.42986
291 4YJ1 ADP 5.47046
292 4YLG GDP 5.47046
293 1BG2 ADP 5.53846
294 1XPJ TLA 5.55556
295 4TTQ ATP 5.5814
296 5MEX PAP 5.59006
297 4C4P GNP 5.60748
298 4U5X GNP 5.61798
299 3REF GDP 5.6701
300 1APZ ASP 5.67376
301 2PZE ATP 5.67686
302 1VG0 GDP 5.68928
303 1YTM ATP 5.68928
304 1I4D GDP 5.72917
305 1DS6 GDP 5.72917
306 1Z0A GDP 5.74713
307 1F9V ADP 5.76369
308 1K6M AGS 5.78704
309 1ZCB GDP 5.80111
310 4GOJ GNP 5.82011
311 5BQ5 ADP BEF 5.82011
312 1W5T ADP 5.82524
313 1W5T ANP 5.82524
314 1GWN GTP 5.85366
315 3GJ3 GDP 5.88235
316 3GJ0 GDP 5.88235
317 3SBD GNP 5.88235
318 2FNA ADP 5.88235
319 1MH1 GNP 5.91398
320 4KAX GTP 5.91716
321 4DID GDP 5.92105
322 3M1I GTP 5.93607
323 1VG1 GDP 5.94595
324 1VG9 GDP 5.94595
325 4JLV ADP 5.94796
326 1G4U AF3 5.97826
327 1G4U GDP 5.97826
328 2NGR AF3 5.98291
329 2NGR GDP 5.98291
330 1T5C ADP 6.01719
331 5BXQ GDP 6.01852
332 3GJX GTP 6.01852
333 2VHJ ADP 6.0423
334 1FZQ GDP 6.07735
335 5BSH PRO 6.13718
336 1SVI GDP 6.15385
337 3VMF GTP 6.16622
338 2FJU GSP 6.17978
339 3CX8 GSP 6.21302
340 1S8F GDP 6.21469
341 5W76 GDP 6.23377
342 1HE1 AF3 6.25
343 1HE1 GDP 6.25
344 2HV8 GTP 6.25
345 2HCJ GDP 6.26866
346 4CVN ADP 6.28272
347 1XX6 ADP 6.28272
348 5DHF GNP 6.29371
349 6CIT GNP 6.29371
350 5DIF GNP 6.29371
351 5UWP GNP 6.29371
352 5UWI GNP 6.29371
353 5UWH GNP 6.29371
354 5UWJ GNP 6.29371
355 5UWT GNP 6.29371
356 5DI9 GNP 6.29371
357 5UWR GNP 6.29371
358 5UWW GNP 6.29371
359 5UWU GNP 6.29371
360 5UWS GNP 6.29371
361 5UWQ GNP 6.29371
362 4LX0 BEF GDP 6.32318
363 4B47 GDP 6.33609
364 5AK0 8V1 6.34573
365 2BIF ANP 6.34573
366 2BIF SIN 6.34573
367 2GJ8 ALF GDP 6.39535
368 4HAT GNP 6.42857
369 2W58 ADP 6.43564
370 1YRB GDP 6.48855
371 1M7B GTP 6.52174
372 6AIC AMP 6.54206
373 1ZUI SKM 6.54762
374 1LVG ADP 6.56566
375 2VVG ADP 6.57143
376 3T12 GDP ALF 6.61765
377 3Q72 GNP 6.62651
378 1SVM ATP 6.6313
379 1R0X ATP 6.64336
380 2OG2 MLI 6.68524
381 5K5Z ANP 6.6879
382 2VB6 ADP BEF 6.71141
383 4FRZ ADP 6.73575
384 4PC3 GDP 6.73759
385 2IS6 ADP 6.78337
386 1DAR GDP 6.78337
387 1IBR GNP 6.78337
388 5H68 AGS 6.78337
389 4KBF AMP 6.84932
390 4PPF FLC 6.85714
391 1B0U ATP 6.87023
392 1GRN AF3 6.89655
393 1GRN GDP 6.89655
394 4P4T GDP 6.94444
395 3P13 RIP 6.94444
396 2GCO GNP 6.96517
397 2GCN GDP 6.96517
398 3RWO GDP 7.02703
399 1G16 GDP 7.05882
400 2J59 GTP 7.22892
401 1O3Y GTP 7.22892
402 1D2E GDP 7.30479
403 4NON GDP 7.30769
404 1RE0 GDP 7.31707
405 3AB3 GDP 7.31707
406 2X77 GDP 7.40741
407 5OCG GNP 7.40741
408 1TAD GDP 7.40741
409 1TAD ALF 7.40741
410 2D7D ADP 7.5
411 4TL6 ANP 7.50988
412 1KSH GDP 7.52688
413 4HI0 GDP 7.53769
414 4D0N GDP 7.56757
415 6BCB GSP 7.56757
416 6BCA GSP 7.56757
417 3CNL GNP 7.63359
418 3CH5 GDP 7.69231
419 1YVD GNP 7.69231
420 3KPE TM3 7.69231
421 2EFE GNH 7.73481
422 2CJW GDP 7.8125
423 6G14 G4P 7.82313
424 2Y65 ADP 7.94521
425 3B9Q MLI 7.94702
426 5J1S ATP 7.94979
427 3WYF GTP 7.98319
428 2KIN ADP 8
429 5TB5 GDP 8
430 5MVR ADP 8.02469
431 6FA4 GNP 8.09249
432 2C5L GTP 8.09249
433 2RCN GDP 8.10056
434 5TAR GDP 8.10811
435 1F2U ATP 8.10811
436 1KMQ GNP 8.15217
437 1FQJ ALF 8.16327
438 1FQK ALF 8.16327
439 1FQJ GDP 8.16327
440 1FQK GDP 8.16327
441 4K81 GTP 8.18713
442 1TU3 GNP 8.18713
443 5L3R GCP 8.19113
444 4PX9 ADP 8.21918
445 2CK3 ANP 8.21918
446 2CK3 ADP 8.21918
447 1R2Q GNP 8.23529
448 1NY5 ADP 8.26873
449 5O2T GSP 8.28402
450 4TQK NAG 8.3151
451 4XOI GTP 8.33333
452 5SZH GNP 8.37438
453 6D5M GNP 8.38323
454 6D56 GNP 8.38323
455 6D5L GNP 8.38323
456 6D59 GNP 8.38323
457 6D5G GNP 8.38323
458 6BVM GNP 8.38323
459 6D5E GNP 8.38323
460 6D55 GNP 8.38323
461 6D5J GNP 8.38323
462 6BVK GNP 8.38323
463 6BVI GNP 8.38323
464 6BVJ GNP 8.38323
465 6BVL GNP 8.38323
466 6D5H GNP 8.38323
467 6D5V GNP 8.38323
468 1LFD GNP 8.38323
469 1WQ1 AF3 8.43373
470 1NVV GNP 8.43373
471 1CLU DBG 8.43373
472 3KUD GDP 8.43373
473 1WQ1 GDP 8.43373
474 1CS4 GSP 8.44444
475 1L2T ATP 8.51064
476 1KO8 6PG 8.57143
477 6BC0 GSP 8.66667
478 1Y63 ADP 8.69565
479 1Z0K GTP 8.72093
480 5H67 ATP 8.75
481 2ZPA ADP 8.75274
482 4XTR ADP 8.75576
483 4XTR ATP 8.75576
484 4XVU ATP 8.75576
485 5WDR GNP 8.77193
486 2D2F ADP 8.8
487 5H7K GDP 8.81612
488 3W5J GDP 8.82353
489 3IIJ ADP 8.88889
490 3A1S GDP 8.91473
491 3BD9 A3P 8.92857
492 2OBM ADP 8.93372
493 4V03 ADP 8.94942
494 3FVQ ATP 8.97155
495 2G77 AF3 9.02439
496 2G77 GDP 9.02439
497 5LEF GTP 9.09091
498 2BME GNP 9.13978
499 2A5F GTP 9.14286
500 3T34 GDP 9.16667
501 1NRJ GTP 9.17431
502 3WYG GTP 9.21053
503 1S9D GDP 9.35961
504 5BN3 ADP 9.375
505 1MR3 G3D 9.39227
506 5Z69 AGS 9.4086
507 5Z2M GTP 9.42029
508 3COB ADP 9.4851
509 1YZG GDP 9.49721
510 2D7C GTP 9.52381
511 4BQS ADP 9.65909
512 2HF9 GSP 9.73451
513 2WIC GNP 9.73783
514 2Q2Y ADP 9.80926
515 2Q2Y MKR 9.80926
516 3N5C GDP 9.87654
517 3KTA AP5 9.89011
518 3BFV ADP 9.9631
519 1WA5 GTP 10.0656
520 2BEK ATP 10.1167
521 1CR1 TTP 10.1351
522 4D0G GTP 10.1449
523 1KAO GDP 10.1796
524 4X8O AP5 10.2804
525 3AQ4 GDP 10.3261
526 1OW3 GDP 10.3306
527 4KFU ACP 10.3774
528 3DDC GNP 10.4294
529 4ZI2 GNP 10.5263
530 1EK0 GNP 10.5882
531 2WJG GDP 10.6383
532 2OZE AGS 10.7383
533 1RJ9 GCP 10.8553
534 4R2I ANP 10.9524
535 1GXU 2HP 10.989
536 5IRR GSP 11.039
537 3QPB URA 11.1597
538 3TKL GTP 11.2245
539 2W2X GSP 11.2903
540 1LVW TYD 11.5254
541 4ZG4 VO4 ADP 11.5974
542 2IYL GDP 11.6197
543 1SQ5 ADP 11.6883
544 4ITR GDP 11.7089
545 1X1R GDP 11.7978
546 3E5H GNP 11.7978
547 1M7G AV2 11.8483
548 2CHG ANP 11.9469
549 2AK3 AMP 11.9469
550 5XKT GNP 12
551 3SFV GDP 12.1547
552 1B7T ADP 12.1795
553 4V0K GDP 12.426
554 4M6T SAM 12.5683
555 5W75 GDP 12.7551
556 3GJ8 GDP 13.0435
557 1KK8 BEF ADP 13.6691
558 1M2O GNP 13.6842
559 1BO4 COA 13.6905
560 1VHT BA3 13.7615
561 1CXZ GSP 13.9535
562 4PJ3 ANP 14.442
563 5WLB GNP 14.7059
564 3RAB GNP 14.7929
565 1G7C 5GP 14.8936
566 2C78 GNP 15.5556
567 2C77 GNP 15.5556
568 4QM7 GTP 15.7895
569 3BC1 GNP 16.4103
570 4E03 ADP 16.5049
571 1XXA ARG 16.6667
572 6C90 ADP 17.3077
573 1GUA GNP 17.3653
574 4HDO GNP 17.3653
575 4HDQ GNP 17.3653
576 1J2J GTP 17.7778
577 4KVG GTP 17.8571
578 3X1Z GNP 17.9641
579 2WJH FLC 18.0723
580 2WJH GDP 18.0723
581 5E95 GDP 18.5567
582 1ZD9 GDP 18.617
583 5KDO GDP 18.9189
584 1GOT GDP 19.1781
585 2V7Q ADP 19.697
586 2V7Q ATP 19.697
587 5UWO GNP 20
588 5IRC GDP 20.4301
589 3LXR GDP 20.5405
590 5HPY GDP 20.5405
591 3MJH GTP 20.5882
592 2W83 GTP 20.7792
593 2UZI GTP 21.1538
594 4XSH GSP 21.229
595 1TX4 ALF GDP 21.4689
596 1KY3 GDP 23.0769
597 2A9K GDP 23.5294
598 3AB4 THR 24.7191
599 1UAD GNP 25.1429
600 1ZC3 GNP 25.1429
601 6CRK GDP 25.3521
602 1GP2 GDP 25.3521
603 3GJ7 GDP 25.5102
604 1U8Z GDP 26.1905
605 3H4S ADP 26.6667
606 5UPK GNP 27.0833
607 3QF7 ANP 28
608 3DOE GTP 28.4848
609 3ZIA ADP 28.5714
610 3ZIA ATP 28.5714
611 2B8W ALF 5GP 33.2317
612 2QN6 GDP 33.3333
613 2OM2 GDP 33.3333
614 1F5N GNP 34.7921
615 1Z0J GTP 35.5932
Pocket No.: 2; Query (leader) PDB : 4IDN; Ligand: GNP; Similar sites found with APoc: 6
This union binding pocket(no: 2) in the query (biounit: 4idn.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
1 4O48 ASP 3.61446
2 1NML CIT 3.68098
3 2WPF WPF 3.71991
4 2CUN 3PG 3.90244
5 5LTJ BEF 4.59519
6 1P4V GLY 6.44068
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