Receptor
PDB id Resolution Class Description Source Keywords
4FFG 2.3 Å EC: 4.2.2.16 CRYSTAL STRUCTURE OF LEVAN FRUCTOTRANSFERASE FROM ARTHROBACT UREAFACIENS IN COMPLEX WITH DFA-IV ARTHROBACTER UREAFACIENS GLYCOSIDE HYDROLASE TRANSFERASE
Ref.: STRUCTURAL AND FUNCTIONAL BASIS FOR SUBSTRATE SPECI AND CATALYSIS OF LEVAN FRUCTOTRANSFERASE. J.BIOL.CHEM. V. 287 31233 2012
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
0U8 A:602;
B:602;
C:602;
D:602;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
324.281 C12 H20 O10 C1[C@...
LBS A:601;
B:601;
C:601;
D:601;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
342.296 C12 H22 O11 C([C@...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4FFG 2.3 Å EC: 4.2.2.16 CRYSTAL STRUCTURE OF LEVAN FRUCTOTRANSFERASE FROM ARTHROBACT UREAFACIENS IN COMPLEX WITH DFA-IV ARTHROBACTER UREAFACIENS GLYCOSIDE HYDROLASE TRANSFERASE
Ref.: STRUCTURAL AND FUNCTIONAL BASIS FOR SUBSTRATE SPECI AND CATALYSIS OF LEVAN FRUCTOTRANSFERASE. J.BIOL.CHEM. V. 287 31233 2012
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 4FFG - LBS C12 H22 O11 C([C@@H]1[....
2 4FFH - SUC C12 H22 O11 C([C@@H]1[....
3 4FFI - LBS C12 H22 O11 C([C@@H]1[....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 4FFG - LBS C12 H22 O11 C([C@@H]1[....
2 4FFH - SUC C12 H22 O11 C([C@@H]1[....
3 4FFI - LBS C12 H22 O11 C([C@@H]1[....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 4FFG - LBS C12 H22 O11 C([C@@H]1[....
2 4FFH - SUC C12 H22 O11 C([C@@H]1[....
3 4FFI - LBS C12 H22 O11 C([C@@H]1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: 0U8; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 0U8 1 1
Ligand no: 2; Ligand: LBS; Similar ligands found: 12
No: Ligand ECFP6 Tc MDL keys Tc
1 LBS 1 1
2 0UB 0.934783 1
3 FRU FRU 0.555556 1
4 GLC FRU FRU 0.52381 0.921053
5 SF6 0.511111 0.888889
6 FRU 0.511111 0.888889
7 LFR 0.511111 0.888889
8 SF9 0.511111 0.888889
9 PSV 0.511111 0.888889
10 F6P 0.490566 0.755556
11 TA6 0.490566 0.755556
12 GLC GLC FRU 0.458333 0.897436
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4FFG; Ligand: 0U8; Similar sites found: 126
This union binding pocket(no: 1) in the query (biounit: 4ffg.bio4) has 9 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4ITH RCM 0.01068 0.43703 1.36054
2 3CXO 3LR 0.01033 0.40342 1.44578
3 3A5Y KAA 0.01687 0.42175 1.44928
4 4QDC ASD 0.03955 0.40509 1.53846
5 4KYS VIB 0.003555 0.43077 1.63934
6 2BUC 008 0.009678 0.41314 1.82927
7 1RWQ 5AP 0.03564 0.40405 1.82927
8 3JQ3 ADP 0.01531 0.43154 1.91257
9 4WUP 3UF 0.007606 0.45854 1.92308
10 2NZ2 CIR 0.003227 0.44299 1.93705
11 5T8U LPA 0.01255 0.41017 1.94444
12 2FFC U5P 0.00722 0.41779 1.983
13 3OV6 MK0 0.008768 0.4376 2.01511
14 4ZLU 4PW 0.01936 0.41309 2.03252
15 4ZLU ADP 0.01936 0.41309 2.03252
16 3ILR SGN 0.005301 0.45311 2.16216
17 2WT2 GAL NAG GAL NAG GAL NAG 0.007483 0.43756 2.33236
18 4D5B ACX 0.01193 0.40028 2.35988
19 5GQF GAL NAG 0.007464 0.40717 2.43902
20 2GQS C2R 0.005473 0.43644 2.53165
21 2VAR KDG 0.002391 0.44902 2.55591
22 4F4P 0SB 0.02554 0.44526 2.5641
23 4WB6 ATP 0.03199 0.41033 2.57143
24 3UH0 TSB 0.04565 0.40883 2.6087
25 4Z24 FAD 0.02093 0.41449 2.64228
26 1ZM1 BGC BGC BGC 0.001261 0.45887 2.90456
27 2FB3 GTP 0.01839 0.40723 2.94118
28 5LJB RTL 0.01668 0.41351 2.96296
29 2C49 ADN 0.003485 0.43364 2.98013
30 4WTR BGC BGC 0.0006503 0.49185 3.02013
31 3VQ2 LP4 LP5 MYR DAO 0.01529 0.42496 3.04878
32 5EPQ OLA 0.01489 0.41551 3.04878
33 4QA8 PJZ 0.01689 0.40923 3.05677
34 2CER PGI 0.04125 0.40761 3.06748
35 5D9O BGC BGC BGC BGC 0.02266 0.41553 3.11615
36 4I5I NAD 0.0362 0.40157 3.13589
37 3A5Z KAA 0.01718 0.423 3.14136
38 5N87 N66 0.03538 0.40929 3.19489
39 3MTX PGT 0.01772 0.40993 3.31126
40 3SIX GDP 0.005002 0.42884 3.33333
41 5GT9 NAP 0.01787 0.41175 3.42205
42 1GQG DCD 0.006298 0.4346 3.42857
43 3HBN UDP 0.004698 0.44639 3.45528
44 3IU9 T07 0.02557 0.41057 3.47222
45 4P8K 38C 0.02555 0.425 3.54167
46 5JCM ISD 0.0148 0.45543 3.54767
47 1ZPT FAD 0.004553 0.47333 3.61842
48 3NV3 GAL NAG MAN 0.007704 0.40345 3.62319
49 3LVW GSH 0.002118 0.48924 3.65854
50 4IEN GDP 0.01374 0.41166 3.68098
51 2YKL NLD 0.003816 0.44963 3.77358
52 5A89 FMN 0.02837 0.41743 3.84615
53 5A89 ADP 0.02837 0.41743 3.84615
54 1GUI BGC BGC BGC BGC BGC BGC 0.000166 0.42017 3.87097
55 7CPA FVF 0.0244 0.40431 3.90879
56 3BZF VAL MET ALA PRO ARG ALA LEU LEU LEU 0.01455 0.42428 4.12371
57 2HNK SAH 0.01074 0.40434 4.1841
58 1TFZ 869 0.003264 0.41324 4.24528
59 4CQE CQE 0.04453 0.40761 4.31655
60 1UOZ GLC SSG SSG SGC 0.01314 0.41229 4.44444
61 5W4W 9WG 0.003913 0.45075 4.53172
62 3ZW2 NAG GAL FUC 0.009749 0.42054 4.5977
63 1EWJ BLM 0.02523 0.42038 4.7619
64 1ERB ETR 0.003155 0.46716 4.91803
65 3AXX CBI 0.01037 0.41052 5.02183
66 1IDA 0PO 0.01777 0.41108 5.05051
67 2X4Z X4Z 0.01291 0.41744 5.06757
68 4BKJ STI 0.02733 0.40486 5.07937
69 2IV2 MGD 0.03775 0.40456 5.0813
70 4X8O AP5 0.017 0.43366 5.14019
71 3EPO MP5 0.006106 0.43276 5.28455
72 3A7R LAQ 0.02397 0.40923 5.34125
73 5U98 1KX 0.03196 0.40252 5.41516
74 1DY4 SNP 0.04902 0.40216 5.52995
75 5N2D 8J8 0.008201 0.44695 5.55556
76 1LSH PLD 0.02683 0.40851 5.64263
77 4MNS 2AX 0.0399 0.41469 5.66038
78 4X6F 3XU 0.001306 0.49067 5.69395
79 3E85 BSU 0.00272 0.45345 5.6962
80 4MMP SLB 0.01355 0.41006 5.84416
81 3G6K FAD 0.04299 0.40179 5.84416
82 3G6K POP 0.04299 0.40179 5.84416
83 1JJE BYS 0.0344 0.40322 5.85586
84 5HZ9 5M8 0.002808 0.4561 5.92593
85 4XT2 43L 0.001564 0.4409 5.98291
86 1OC7 MA3 0.01879 0.42374 6.04396
87 3KYF 5GP 5GP 0.009922 0.42169 6.06061
88 5J75 6GQ 0.01837 0.40387 6.06061
89 5KJW 53C 0.001527 0.44825 6.08899
90 5IXH OTP 0.005914 0.45046 6.21118
91 4CPH LH4 0.001145 0.45361 6.29921
92 1Q19 APC 0.02579 0.40763 6.30081
93 3QXV MTX 0.008146 0.43225 6.34921
94 2RDE C2E 0.01358 0.41103 6.3745
95 5HA0 LTD 0.0006965 0.46237 6.41026
96 4WVO 3UZ 0.02207 0.40119 6.62983
97 3WG3 A2G GAL NAG FUC 0.0002169 0.48285 6.74157
98 2RG0 CTT 0.01095 0.42219 6.74419
99 3STK PLM 0.03481 0.4025 6.81818
100 4BFM ANP 0.01489 0.41455 6.88623
101 1LNM DTX 0.001051 0.46388 7.06522
102 3TTZ 07N 0.01168 0.40888 7.07071
103 5DYO FLU 0.01443 0.4116 7.07547
104 3GD9 GLC BGC BGC BGC 0.01858 0.41779 7.08447
105 4K55 H6P 0.002224 0.44536 7.25806
106 3FW4 CAQ 0.005503 0.42659 7.30337
107 4P8O 883 0.0138 0.40314 7.48663
108 3SAO NKN 0.002689 0.43507 7.5
109 1D5Z ACE ALC ARG ALA ODA SER LEU NH2 0.01058 0.43972 7.53138
110 5LXT GTP 0.00693 0.47921 7.69231
111 5L6G XYP 0.01102 0.40463 7.72358
112 4YEE 4CQ 0.006135 0.40858 7.77778
113 1KGI T4A 0.01021 0.41862 7.87402
114 4X9X OLA 0.01412 0.43647 8.02676
115 5XLY C2E 0.01918 0.40888 8.18505
116 3GKJ HC3 0.01466 0.4122 8.18966
117 3ZXE PGZ 0.0005079 0.45934 9.02256
118 1U0A BGC BGC BGC BGC 0.00226 0.45404 9.81308
119 4HN1 TYD 0.004627 0.43655 9.95025
120 3TKI S25 0.04199 0.40757 10.5263
121 4RYV ZEA 0.003868 0.43105 11.6129
122 3ACL 3F1 0.02053 0.40202 12.1622
123 3TAY MN0 0.006608 0.42571 15.9509
124 3VV1 GAL FUC 0.01038 0.40087 16.875
125 5EYP GDP 0.031 0.40834 17.1598
126 1NCQ W11 0.01314 0.41979 17.6471
Pocket No.: 2; Query (leader) PDB : 4FFG; Ligand: LBS; Similar sites found: 69
This union binding pocket(no: 2) in the query (biounit: 4ffg.bio4) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3TXO 07U 0.0151 0.4134 1.41643
2 5X8I SQZ 0.01139 0.41078 1.7341
3 1EB1 ASP TYR GLU PRO ILE PRO GLU GLU ALA PHE 0.0005945 0.47278 1.94553
4 4RNV HBA 0.01596 0.42845 2.25
5 5UR1 YY9 0.01426 0.40085 2.57235
6 1PS9 FMN 0.02845 0.42355 2.64228
7 1M0W ANP 0.003225 0.40023 2.64766
8 3RGA LSB 0.002696 0.41853 2.82686
9 3RGA ILD 0.01491 0.4144 2.82686
10 1ZM1 BGC BGC BGC 0.0001845 0.49651 2.90456
11 4WNP 3RJ 0.01091 0.41549 3.13589
12 4N1T 2GD 0.002278 0.4376 3.14465
13 4O12 2QG 0.02064 0.44859 3.25203
14 5H9Y BGC BGC BGC BGC BGC 0.003118 0.4458 3.37838
15 5JR6 01B PRO PRO ALA NH2 0.003647 0.45109 3.45528
16 2E3N 6CM 0.005726 0.43049 3.52941
17 4CNO 9PY 0.0021 0.44397 3.57143
18 5SVV FMN 0.004623 0.44313 3.64964
19 3Q8G PEE 0.01041 0.41181 3.75
20 5DRB 5FJ 0.02393 0.41324 3.78007
21 5BR7 FLC 0.01544 0.4336 3.81679
22 3R4S SIA 0.00164 0.40711 3.83747
23 5FI4 5XV 0.01641 0.41006 4.02477
24 2AMV BIN 0.02083 0.4054 4.26829
25 3M2W L8I 0.02206 0.40626 4.34783
26 3MVH WFE 0.01163 0.42713 4.38596
27 4UIN QI9 0.00138 0.4249 4.6729
28 3HQP OXL 0.004741 0.4086 4.6748
29 5F2T PLM 0.003582 0.41448 4.87013
30 4USF 6UI 0.01113 0.40053 4.93421
31 1LBF 137 0.01138 0.40669 5.26316
32 2R5T ANP 0.01487 0.40097 5.36193
33 2Q8Y GLN TYR PHE MET TPO GLU PTR VAL ALA 0.003885 0.41995 5.39419
34 1EM6 CP4 0.01868 0.44405 5.4878
35 2X34 UQ8 0.02481 0.40668 5.52486
36 2X32 OTP 0.008497 0.40037 5.58659
37 3RI1 3RH 0.02091 0.4085 5.7508
38 4XT2 43L 0.003237 0.42169 5.98291
39 4Q0L V14 0.01323 0.40771 6.08365
40 2GJ5 VD3 0.02373 0.4049 6.17284
41 5NCF 8T5 0.01396 0.40008 6.19469
42 5IXH OTP 0.01369 0.40628 6.21118
43 4R38 RBF 0.018 0.40295 6.42857
44 4B9K TG0 0.003154 0.41047 6.73077
45 4BKS X6C 0.003588 0.40949 6.79012
46 4W9F 3JU 0.004283 0.40766 6.79012
47 5NVX 4YY 0.004806 0.40148 6.79012
48 3FW4 CAQ 0.001027 0.45048 7.30337
49 3SAO NKN 0.003369 0.40865 7.5
50 5HQ0 LZ9 0.002958 0.44902 7.69231
51 4PSB GA3 0.008688 0.40761 7.74194
52 5EFW FMN 0.003539 0.4412 8.33333
53 5DKK FMN 0.003801 0.43716 8.96552
54 3HDY FDA 0.004703 0.44323 9.3199
55 3HDY FAD 0.006206 0.43407 9.3199
56 3HDY GDU 0.00668 0.43117 9.3199
57 1U0A BGC BGC BGC BGC 0.003756 0.40435 9.81308
58 5DJT FMN 0.002813 0.45039 9.83607
59 2Z6C FMN 0.01278 0.4027 10.8527
60 3IS2 FAD 0.02318 0.40981 11.039
61 4B1M FRU FRU 0.003299 0.40644 11.3514
62 4GCZ FMN 0.007103 0.42726 12.2078
63 5LXM ADP 0.00901 0.41987 13.1579
64 4C2W ANP 0.006822 0.41573 14.6953
65 4EES FMN 0.005548 0.44064 14.7826
66 4WUJ FMN 0.004749 0.44165 17.6871
67 2HO2 PRO PRO PRO PRO PRO PRO PRO PRO PRO LEU 0.002878 0.40619 18.4211
68 5L8L ADP 0.01128 0.40331 18.8034
69 1N5S ADL 0.007798 0.40777 20.5357
Pocket No.: 3; Query (leader) PDB : 4FFG; Ligand: LBS; Similar sites found: 29
This union binding pocket(no: 3) in the query (biounit: 4ffg.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3B99 U51 0.002219 0.42032 1.26316
2 4ITH RCM 0.02044 0.41124 1.36054
3 4PXD 1AL 0.009518 0.40675 1.93705
4 3SRV S19 0.01003 0.42151 2.52708
5 5L83 ASP TRP GLU ILE VAL 0.0145 0.40533 2.67857
6 5X7Q BGC 0.016 0.42215 3.65854
7 2ZL7 FUC GAL NGA 0.005543 0.40852 3.72881
8 4RFR RHN 0.01149 0.40446 3.94089
9 4UWJ MYA 0.01374 0.45978 4.4226
10 4UWJ 7L5 0.01374 0.45978 4.4226
11 3NW7 LGV 0.0193 0.40252 4.56026
12 3ZW2 NAG GAL FUC 0.006085 0.40275 4.5977
13 1EWJ BLM 0.01786 0.41235 4.7619
14 5M42 FMN 0.004172 0.42071 5.01792
15 3C0G 3AM 0.008086 0.41054 5.41311
16 5MZI FYK 0.02563 0.42793 5.42299
17 5MZI FAD 0.0251 0.42793 5.42299
18 1VYP TNF 0.021 0.40381 5.76923
19 3WO0 ALA 0.02506 0.41599 6.17021
20 3NX2 FER 0.005352 0.4109 7.14286
21 5JZJ AN2 0.006212 0.40908 7.74411
22 3G5D 1N1 0.0145 0.41559 9.09091
23 1MH5 HAL 0.01066 0.41171 9.13043
24 5D48 L96 0.0118 0.40398 9.21053
25 3D72 FAD 0.01964 0.41233 11.4094
26 4A4X JUP 0.005656 0.41498 13.6201
27 1OGX EQU 0.01355 0.40395 16.0305
28 1BHX ASP PHE GLU GLU ILE 0.001828 0.41354 18.3673
29 3VHH VHH 0.02718 0.4062 20.3252
Pocket No.: 4; Query (leader) PDB : 4FFG; Ligand: 0U8; Similar sites found: 39
This union binding pocket(no: 4) in the query (biounit: 4ffg.bio1) has 9 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1RZ0 FAD 0.04602 0.40031 None
2 3CXO 1N5 0.01152 0.40212 1.44578
3 5W0N UPU 0.02767 0.4006 1.48883
4 3B9O FMN 0.01717 0.40484 1.81818
5 1NAA ABL 0.03887 0.40317 1.82927
6 1NAA 6FA 0.03158 0.40317 1.82927
7 1M15 ARG 0.004374 0.457 1.96078
8 1M15 ADP 0.004374 0.457 1.96078
9 4M7T SAM 0.009337 0.43501 2.22222
10 1YKJ FAD 0.0426 0.41262 3.04569
11 1YKJ PHB 0.0426 0.41262 3.04569
12 3WUC GLC GAL 0.03538 0.40173 3.64964
13 5DRB 5FJ 0.004419 0.45573 3.78007
14 1TMM HHR 0.03233 0.41164 3.79747
15 1TMM APC 0.03351 0.41164 3.79747
16 4MPO AMP 0.005967 0.4008 3.92157
17 2VJJ RAM GLC GAL NAG NAG GLC 0.02202 0.41904 4.06504
18 4XV1 904 0.02214 0.41688 4.10959
19 2YAK OSV 0.02161 0.42443 4.21053
20 5FNU L6I 0.01528 0.40533 4.27632
21 1KZN CBN 0.01225 0.42485 4.39024
22 3ZW2 GLA NAG GAL FUC 0.01407 0.41954 4.5977
23 2CM4 RCL 0.005568 0.41565 4.66667
24 5FU3 BGC BGC BGC 0.01042 0.40208 4.71698
25 5A5W GUO 0.04133 0.40527 5.13834
26 4ZS4 ATP 0.01738 0.40744 5.21173
27 4YLZ LAT NAG GAL 0.0001432 0.49725 5.22876
28 5DQ8 FLF 0.008061 0.43428 5.83333
29 4Q0L V14 0.03536 0.40245 6.08365
30 4U0W 16G 0.006676 0.4113 6.09756
31 4R38 RBF 0.02276 0.40447 6.42857
32 3L9R L9Q 0.03599 0.41113 7.14286
33 3L9R L9R 0.04375 0.40785 7.14286
34 4XIZ LPP 0.02117 0.41909 8.57143
35 5D48 L96 0.02422 0.40788 9.21053
36 4LED XXR 0.00902 0.40253 10.0746
37 2A4W BLM 0.02216 0.40568 10.1449
38 4TW7 37K 0.01668 0.4224 10.1562
39 4H6U ACO 0.02188 0.4093 10.5
Pocket No.: 5; Query (leader) PDB : 4FFG; Ligand: 0U8; Similar sites found: 45
This union binding pocket(no: 5) in the query (biounit: 4ffg.bio3) has 10 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5LRT ADP 0.02368 0.41982 1.82927
2 4H3P ANP 0.02111 0.4048 2.20994
3 4YZC STU 0.02915 0.40674 2.22222
4 1PHK ATP 0.02274 0.4077 2.34899
5 1U1B PAX 0.04816 0.40324 2.41935
6 5H9P TD2 0.01117 0.40502 2.53165
7 4J25 OGA 0.009745 0.41564 2.62009
8 3RGA LSB 0.007514 0.4096 2.82686
9 4XDA RIB 0.01668 0.41269 2.91262
10 4MKF AP5 0.04202 0.40231 3.22581
11 5D9G GLU ASN LEU TYR PHE GLN 0.01247 0.40052 3.25203
12 5FP3 3JI 0.01881 0.4067 3.45528
13 3E8N VRA 0.02973 0.42068 3.51906
14 3E8N ATP 0.02973 0.42068 3.51906
15 2E3N 6CM 0.01633 0.41352 3.52941
16 5GM5 CBI 0.01054 0.40564 3.63636
17 5X7Q GLC GLC GLC BGC 0.042 0.40004 3.65854
18 5J8O 6GZ 0.0124 0.42956 4.03226
19 2E56 MYR 0.001915 0.47917 4.16667
20 3QCQ 3Q0 0.03204 0.42131 4.16667
21 1V7C HEY 0.02573 0.40627 4.5584
22 5JSD 1GN ACY GAL ACY 1GN BGC GAL BGC 0.001684 0.47439 4.87805
23 1YP4 ADP 0.004364 0.43347 4.87805
24 4YFB PAC 0.01089 0.41548 5.05618
25 4MKG AP5 0.02263 0.42289 5.06912
26 4O4F ATP 0.04287 0.40288 5.24194
27 3KEE 30B 0.02707 0.41102 5.26316
28 2A1L PCW 0.005347 0.46548 5.55556
29 3FB4 AP5 0.03434 0.4081 5.55556
30 1UDB NAD 0.04648 0.41887 5.6213
31 3FHI ANP 0.03747 0.40102 5.84416
32 1AE1 NAP 0.03955 0.40557 6.22711
33 1WW5 SGA BGC 0.006352 0.40343 6.25
34 5ML3 DL3 0.02245 0.42723 6.71141
35 5LYH 7B8 0.02735 0.41789 6.73575
36 3T3C 017 0.01479 0.40666 8.08081
37 5KDO GDP 0.01465 0.41722 8.10811
38 4ZSI GLP 0.007046 0.41789 8.18713
39 4ZSI 4R1 0.01424 0.40717 8.18713
40 2HY0 306 0.01857 0.4043 10.559
41 5U1M ACE LEU TYR ALA SER SER ASN PRO ALA PTR 0.02291 0.41604 11.4286
42 1QY1 PRZ 0.01344 0.41659 13.2184
43 3P8N L4T 0.01573 0.42169 14.5161
44 1OGX EQU 0.01261 0.40641 16.0305
45 5FQC OK3 0.02055 0.40734 21.0744
Pocket No.: 6; Query (leader) PDB : 4FFG; Ligand: LBS; Similar sites found: 74
This union binding pocket(no: 6) in the query (biounit: 4ffg.bio3) has 9 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5H2D ERG 0.006417 0.41631 1.14943
2 3T31 DCQ 0.013 0.45896 1.60183
3 5I0F GLC GLC 0.006606 0.41483 1.77353
4 1ZOA 140 0.008485 0.43627 1.90275
5 4YZC STU 0.01733 0.41933 2.22222
6 3U6W KIV 0.01125 0.40792 2.34192
7 1QVJ RP5 0.01574 0.4001 2.39726
8 1QHO ABD 0.02059 0.40063 2.43902
9 4RPL 3UC 0.04165 0.41316 2.50627
10 4WB6 ATP 0.02117 0.40421 2.57143
11 2C4I BTN 0.001785 0.44597 2.58303
12 1TKK ALA GLU 0.01526 0.41562 2.73224
13 1OFZ FUC 0.004564 0.41832 2.88462
14 1MJJ HAL 0.01167 0.40091 3.04878
15 5N87 N66 0.02281 0.40767 3.19489
16 4L9I 8PR 0.004328 0.43168 3.45528
17 3LVW GSH 0.01352 0.4282 3.65854
18 5DS8 GLY 5CT GLY ALA 0.01307 0.40873 4.05405
19 2Q3O FMN 0.01127 0.4221 4.09207
20 1D6H COA 0.04522 0.4038 4.39277
21 2YGN PCF 0.02013 0.4119 4.48718
22 3ZW2 GLA NAG GAL FUC 0.006991 0.41491 4.5977
23 3ZW2 GAL FUC 0.008933 0.40896 4.5977
24 2CM4 RCL 0.0007878 0.46474 4.66667
25 4BJ8 BTN 0.004473 0.43025 4.7619
26 3X00 ZOF ZOF EDN 0.02847 0.42585 4.7619
27 3X00 ZOF EDN ZOF 0.02793 0.42585 4.7619
28 5LD8 6U5 0.01799 0.41644 4.82759
29 4EKV BTN 0.002988 0.43778 5.03145
30 5A5W GUO 0.03326 0.40575 5.13834
31 2YNE YNE 0.03426 0.43999 5.20833
32 2YNE NHW 0.03426 0.43999 5.20833
33 3EKK GS2 0.02996 0.40437 5.21173
34 3RDO BTN 0.00305 0.4251 5.22876
35 2YGO PCF 0.01634 0.41736 5.31915
36 3A7R LAQ 0.03308 0.41039 5.34125
37 1SR9 KIV 0.01065 0.40858 5.69106
38 5DQ8 FLF 0.01942 0.40719 5.83333
39 3EW2 BTN 0.006664 0.41253 5.92593
40 5J75 6GQ 0.005872 0.4148 6.06061
41 2IFB PLM 0.01018 0.4328 6.10687
42 1WBI BTN 0.009154 0.40675 6.20155
43 4BX7 B4F 0.002289 0.45285 6.25
44 1SWG BTN 0.007113 0.41771 6.25
45 3GM5 CIT 0.00971 0.40168 6.28931
46 4CPH LH4 0.01897 0.40113 6.29921
47 4QJP V1F 0.02141 0.40776 6.46388
48 3T2W BTN 0.003707 0.43171 6.55738
49 5IH9 6BF 0.004256 0.45104 6.56716
50 4AZW ATP 0.004375 0.42425 6.58174
51 5IH1 6BQ 0.01231 0.43703 6.62252
52 5IH1 GDP 0.01231 0.43703 6.62252
53 5ML3 DL3 0.02247 0.42063 6.71141
54 1ZEA DVA DPR GLY DSN DGN DHI DTY DAS DSN 0.01312 0.4102 6.94444
55 4QYN RTL 0.01918 0.40514 7.5188
56 1KGI T4A 0.01516 0.41586 7.87402
57 4HIA FMN 0.01835 0.40618 7.95455
58 1UU6 BGC BGC BGC BGC 0.00755 0.41742 8.03571
59 5FAG PPI 0.01278 0.4203 8.29268
60 4B7P 9UN 0.009478 0.43625 8.69565
61 4NS0 PIO 0.003318 0.42191 9.77444
62 2A4W BLM 0.001128 0.47035 10.1449
63 1ZNY GDP 0.003548 0.42508 10.1449
64 5TFZ 7BC 0.001841 0.4435 10.6667
65 3L5R 47X 0.02963 0.41253 12.2951
66 2XMY CDK 0.03169 0.40854 12.4161
67 4XBT 3ZQ 0.009473 0.41389 13.5484
68 4XBT FLC 0.0111 0.41334 13.5484
69 2IBZ UQ6 0.01909 0.41957 13.6364
70 4MA6 28E 0.001273 0.44468 14.0127
71 1Y0G 8PP 0.02885 0.40701 15.1832
72 4BCS BTN 0.01847 0.40021 16
73 1Y52 BTN 0.008498 0.43217 16.6667
74 1J3R 6PG 0.005429 0.40983 18.4211
Pocket No.: 7; Query (leader) PDB : 4FFG; Ligand: 0U8; Similar sites found: 89
This union binding pocket(no: 7) in the query (biounit: 4ffg.bio2) has 14 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5A3T MMK 0.006558 0.44592 1.2474
2 4JH6 FCN 0.002184 0.4275 1.44928
3 4I8P NAD 0.006498 0.44986 1.62602
4 1S4M LUM 0.009059 0.43444 1.70648
5 2R85 AMP 0.01903 0.42126 1.79641
6 1VBR XYS XYP 0.01036 0.40696 1.82927
7 4IGQ THR M3L GLN 0.0205 0.40497 1.94444
8 5JFS 6K0 0.04824 0.40758 1.94805
9 4BG4 ADP 0.0003491 0.40601 1.96629
10 5IVE 6E8 0.01089 0.4342 2.12121
11 1FH8 XYP XIF 0.01333 0.40158 2.24359
12 1WUB OTP 0.008739 0.45129 2.24719
13 2WSA MYA 0.02527 0.44772 2.28311
14 2WSA 646 0.02527 0.44772 2.28311
15 4QAC KK3 0.018 0.41734 2.30415
16 4P25 FUC GAL NAG FUC 0.005237 0.43322 2.31788
17 3M3R BCD 0.006147 0.4567 2.38908
18 2RCU BUJ 0.03753 0.42395 2.43902
19 4ZUL UN1 0.0456 0.40082 2.43902
20 3VKC FPQ 0.02864 0.40082 2.44755
21 4CS4 ANP 0.03443 0.41477 2.55474
22 5XDT MB3 0.02066 0.42279 2.5974
23 1E5Q NDP 0.04398 0.40051 2.66667
24 5E89 TD2 0.0007199 0.42219 2.8777
25 3IX8 TX3 0.02506 0.40975 2.89017
26 2IFW ACE PHE LYS PHE PSA LEU AAR 0.0008974 0.4932 2.91262
27 1ZB6 GST 0.002939 0.46305 2.9316
28 1ZB6 DIN 0.0335 0.40566 2.9316
29 4H6B 10X 0.006251 0.42277 3.07692
30 4H6B 10Y 0.00559 0.42009 3.07692
31 3R96 AMP 0.04315 0.40936 3.19149
32 3R96 ACO 0.04315 0.40936 3.19149
33 2CET PGI 0.01535 0.41954 3.20513
34 5H9Y BGC BGC BGC BGC BGC 0.003784 0.42551 3.37838
35 5F3I 5UJ 0.01375 0.44866 3.61111
36 5C9J STE 0.02742 0.40018 4.0404
37 5AE2 FYC 0.0272 0.44174 4.06504
38 5AE2 FAD 0.0272 0.44174 4.06504
39 5L2J 70E 0.01693 0.45083 4.08163
40 1LN1 DLP 0.03669 0.40818 4.20561
41 1N07 FMN 0.03624 0.40848 4.29448
42 5BU3 4W9 0.00192 0.46132 4.34783
43 4NG2 OHN 0.02126 0.41211 4.42478
44 5LIA 6XN 0.006278 0.47556 4.47154
45 2P7Q GG6 0.004631 0.42409 4.51128
46 3T4L ZEA 0.005123 0.4337 4.81482
47 5JSD ACY 1GN GAL 1GN BGC ACY GAL BGC 0.01492 0.43568 4.87805
48 5DEY 59T 0.03237 0.4262 5.05051
49 2YNE NHW 0.02017 0.44818 5.20833
50 2YNE YNE 0.02017 0.44818 5.20833
51 4ZZE GLC GLC GLC 0.007837 0.4129 5.30303
52 3LKJ LKJ 0.01638 0.42594 5.67376
53 1NML CIT 0.03891 0.40092 5.82822
54 3W7T BMA 0.01379 0.41557 5.89431
55 1B3X XYP XYP XYP 0.005803 0.42437 5.96026
56 1MHC FME TYR PHE ILE ASN ILE LEU THR LEU 0.04859 0.4036 6.06061
57 2VZZ SCA 0.03753 0.40423 6.42202
58 4QJP V1F 0.01048 0.42821 6.46388
59 1Y2F WAI 0.0007807 0.42298 6.47482
60 5IH9 6BF 0.0383 0.40927 6.56716
61 4RW3 IPD 0.009019 0.40991 6.62252
62 4ZYB 4SQ 0.009519 0.40605 6.71642
63 4YBN FAD 0.02432 0.41434 7.14286
64 4M1U MBG A2G 0.03224 0.40117 7.14286
65 1ODM ASV 0.03505 0.40067 7.25076
66 3N0Y APC 0.002981 0.45503 7.82123
67 4HIA FMN 0.004329 0.46052 7.95455
68 5LUN ARG 0.02956 0.40596 7.95455
69 1OVD ORO 0.00751 0.44985 8.03859
70 1OVD FMN 0.00751 0.44985 8.03859
71 5XS3 VAL ARG SER ARG ARG CYS LEU ARG LEU 0.04059 0.42652 8.16327
72 1SU2 ATP 0.01902 0.4048 8.1761
73 4PMZ BXP 0.005601 0.40838 8.25082
74 3IOI 1GW 0.02841 0.41421 9.0604
75 3MJY FMN 0.03345 0.41036 9.24856
76 3MJY IJZ 0.03345 0.41036 9.24856
77 4IYO 0JO 0.01891 0.40851 9.57179
78 4Y24 TD2 0.0005866 0.47093 9.74026
79 2YG2 FLC 0.02152 0.41325 9.88372
80 3C3N FMN 0.01079 0.44024 10.8974
81 5HMY LNY 0.01427 0.43672 11.1789
82 3OYW TDG 0.003688 0.42605 11.194
83 2DIO EOD 0.01413 0.40733 12.766
84 3EM0 CHD 0.02235 0.42968 13.0435
85 5UQW GDP 0.02639 0.40718 14.8148
86 1Y0G 8PP 0.001948 0.48706 15.1832
87 4WN5 MVC 0.01333 0.41967 16.5217
88 3G08 FEE 0.004005 0.47876 20.202
89 5FKP 6UL 0.01152 0.43031 22.7273
Pocket No.: 8; Query (leader) PDB : 4FFG; Ligand: LBS; Similar sites found: 16
This union binding pocket(no: 8) in the query (biounit: 4ffg.bio2) has 9 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4QCK ASD 0.003489 0.43891 1.81347
2 3PE2 E1B 0.01973 0.40606 2.43902
3 4J25 OGA 0.004533 0.40867 2.62009
4 4JIQ FMN 0.02506 0.40055 2.91777
5 4JIQ 1L5 0.02506 0.40055 2.91777
6 2NSX IFM 0.01345 0.40681 3.01811
7 2GC0 PAN 0.004695 0.40955 3.19149
8 5F3I 5UJ 0.02994 0.41001 3.61111
9 3T64 DU3 0.04591 0.40325 4.41989
10 2NVA PL2 0.006515 0.43077 4.83871
11 5KWY C3S 0.006073 0.42096 6.01504
12 3E7O 35F 0.01575 0.41019 7.22222
13 4HK8 XYP XYP XYP XYP XYP XYP 0.005308 0.43907 7.40741
14 2Z6D FMN 0.01866 0.4085 7.69231
15 3ACL 3F1 0.01039 0.40147 12.1622
16 2ZSC BTN 0.008513 0.41207 13.4752
Feedback