Receptor
PDB id Resolution Class Description Source Keywords
4D7E 2.4 Å EC: 1.-.-.- AN UNPRECEDENTED NADPH DOMAIN CONFORMATION IN LYSINE MONOOXYGENASE NBTG FROM NOCARDIA FARCINICA NOCARDIA FARCINICA IFM 10152 OXIDOREDUCTASE LYSINE HYDROXYLASE FLAVIN-DEPENDENT MONOOXYN-HYDROXYLATING MONOOXYGENASES SIDEROPHORE C4A-HYDROPEROX
Ref.: AN UNPRECEDENTED NADPH DOMAIN CONFORMATION IN LYSIN MONOOXYGENASE NBTG PROVIDES INSIGHTS INTO UNCOUPLIN OXYGEN CONSUMPTION FROM SUBSTRATE HYDROXYLATION. J.BIOL.CHEM. V. 290 12676 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
FAD C:500;
D:500;
A:500;
B:500;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
785.55 C27 H33 N9 O15 P2 Cc1cc...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4D7E 2.4 Å EC: 1.-.-.- AN UNPRECEDENTED NADPH DOMAIN CONFORMATION IN LYSINE MONOOXYGENASE NBTG FROM NOCARDIA FARCINICA NOCARDIA FARCINICA IFM 10152 OXIDOREDUCTASE LYSINE HYDROXYLASE FLAVIN-DEPENDENT MONOOXYN-HYDROXYLATING MONOOXYGENASES SIDEROPHORE C4A-HYDROPEROX
Ref.: AN UNPRECEDENTED NADPH DOMAIN CONFORMATION IN LYSIN MONOOXYGENASE NBTG PROVIDES INSIGHTS INTO UNCOUPLIN OXYGEN CONSUMPTION FROM SUBSTRATE HYDROXYLATION. J.BIOL.CHEM. V. 290 12676 2015
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 280 families.
1 4D7E - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 247 families.
1 4D7E - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 177 families.
1 4D7E - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: FAD; Similar ligands found: 119
No: Ligand ECFP6 Tc MDL keys Tc
1 FAS 1 1
2 FAD 1 1
3 FAY 0.859259 0.9875
4 RFL 0.852941 0.963855
5 6FA 0.794118 0.987654
6 DAL FAD PER 0.772414 0.951807
7 FAE 0.751773 0.987654
8 SFD 0.651007 0.860215
9 FDA 0.641892 0.906977
10 FNK 0.602564 0.876405
11 62F 0.572327 0.939024
12 F2N 0.566265 0.886364
13 FMN 0.543307 0.876543
14 FA9 0.526316 0.939759
15 6YU 0.516304 0.860215
16 CNV FAD 0.511905 0.908046
17 P6G FDA 0.511628 0.908046
18 FAD NBT 0.508876 0.83871
19 A2D 0.504065 0.875
20 P5F 0.491329 0.941176
21 FAD CNX 0.488506 0.8125
22 APR 0.488372 0.851852
23 AR6 0.488372 0.851852
24 AGS 0.484615 0.811765
25 SAP 0.484615 0.811765
26 M33 0.484375 0.864198
27 BA3 0.484127 0.875
28 FAD NBA 0.480663 0.802083
29 ATP 0.48062 0.851852
30 B4P 0.480315 0.875
31 ADP 0.480315 0.851852
32 AP5 0.480315 0.875
33 ANP 0.477273 0.831325
34 AQP 0.476923 0.851852
35 5FA 0.476923 0.851852
36 48N 0.469388 0.902439
37 OAD 0.467626 0.876543
38 GTA 0.465753 0.892857
39 AN2 0.465116 0.841463
40 AD9 0.462121 0.831325
41 3OD 0.460993 0.876543
42 RBF 0.460938 0.790123
43 FB0 0.460606 0.835165
44 139 0.460526 0.858824
45 AP0 0.46 0.835294
46 A22 0.459854 0.864198
47 ACP 0.458015 0.853659
48 8QN 0.456522 0.864198
49 PRX 0.454545 0.831325
50 A1R 0.453237 0.86747
51 G3A 0.452055 0.902439
52 T5A 0.45098 0.872093
53 G5P 0.44898 0.902439
54 ATF 0.448529 0.821429
55 50T 0.44697 0.819277
56 ACQ 0.444444 0.853659
57 PAJ 0.442857 0.847059
58 ADQ 0.442857 0.853659
59 5AL 0.441176 0.864198
60 ADX 0.439394 0.775281
61 CA0 0.439394 0.853659
62 A4P 0.437909 0.831461
63 25L 0.4375 0.864198
64 P33 FDA 0.436464 0.817204
65 5SV 0.435714 0.793103
66 TXE 0.434211 0.890244
67 OMR 0.434211 0.818182
68 ABM 0.434109 0.829268
69 A 0.433071 0.82716
70 AMP 0.433071 0.82716
71 4AD 0.432624 0.855422
72 ADJ 0.432258 0.818182
73 BIS 0.430556 0.802326
74 SRA 0.429688 0.788235
75 AFH 0.42953 0.825581
76 TXD 0.427632 0.890244
77 NXX 0.427632 0.865854
78 UP5 0.427632 0.878049
79 DND 0.427632 0.865854
80 6V0 0.427632 0.857143
81 SRP 0.42446 0.843373
82 PR8 0.423611 0.837209
83 TAT 0.423358 0.821429
84 AMO 0.422535 0.865854
85 PTJ 0.42069 0.835294
86 FYA 0.42069 0.864198
87 TXA 0.42069 0.865854
88 CNA 0.420382 0.865854
89 00A 0.41958 0.823529
90 AHX 0.41958 0.835294
91 MAP 0.41844 0.811765
92 NAI 0.418301 0.845238
93 AU1 0.41791 0.831325
94 AP2 0.416667 0.843373
95 A12 0.416667 0.843373
96 25A 0.415493 0.851852
97 AMP MG 0.415385 0.785714
98 COD 0.415094 0.842697
99 ADP BEF 0.414815 0.77907
100 BEF ADP 0.414815 0.77907
101 4TC 0.412903 0.879518
102 APC 0.411765 0.843373
103 NB8 0.410959 0.835294
104 ME8 0.410959 0.806818
105 1ZZ 0.410959 0.806818
106 4UW 0.409091 0.825581
107 NAX 0.409091 0.837209
108 RBY 0.408759 0.843373
109 ADV 0.408759 0.843373
110 ADP MG 0.407407 0.797619
111 P1H 0.405882 0.818182
112 OOB 0.405594 0.864198
113 A A 0.40411 0.829268
114 LAD 0.40411 0.825581
115 UPA 0.403846 0.86747
116 4UU 0.401316 0.833333
117 A3D 0.401235 0.876543
118 DLL 0.4 0.864198
119 XAH 0.4 0.806818
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4D7E; Ligand: FAD; Similar sites found: 418
This union binding pocket(no: 1) in the query (biounit: 4d7e.bio1) has 37 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2BOS GLA GAL GLC NBU 0.016 0.43171 None
2 2BOS GLA GAL GLC 0.02713 0.41558 None
3 5BUK FAD 0.000002058 0.51911 1.1655
4 4MIG G3F 0.00002089 0.48718 1.3986
5 2ZXI FAD 0.00005826 0.45181 1.41287
6 2XT3 ADP 0.04326 0.4138 1.45349
7 5I39 FAD 0.0000004736 0.51787 1.47059
8 1CDO NAD 0.005772 0.40595 1.60428
9 1HYH NAD 0.0009315 0.42646 1.61812
10 3GDN HBX 0.00006231 0.47178 1.6317
11 3GDN FAD 0.00003541 0.47178 1.6317
12 3NTA FAD 0.00003435 0.46704 1.6317
13 3NT6 FAD 0.00003139 0.45681 1.6317
14 5TE1 7A2 0.04489 0.40367 1.6317
15 4J36 FAD 0.000003429 0.48835 1.68675
16 4J36 1HR 0.00001805 0.4836 1.68675
17 3U31 NAD 0.008244 0.41032 1.72414
18 5THY SAH 0.009782 0.40995 1.7284
19 3JV7 NAD 0.003395 0.40752 1.73913
20 2YYY NAP 0.001861 0.4203 1.74927
21 3V1Y NAD 0.0001344 0.47231 1.78042
22 1J49 NAD 0.002014 0.41896 1.8018
23 2VT3 ATP 0.00006724 0.53927 1.86047
24 1FEC FAD 0.00003716 0.47575 1.8648
25 2NPX FAD 0.00003122 0.46107 1.8648
26 1MV8 NAD 0.0006238 0.44524 1.8648
27 1P31 EPU 0.002548 0.44317 1.8648
28 4KRI SAH 0.003451 0.43011 1.8648
29 4AZT SAM 0.007726 0.42088 1.8648
30 4EIP K2C 0.00006439 0.41719 1.8648
31 4EIP FAD 0.00006439 0.41719 1.8648
32 4ARE FLC 0.04166 0.40757 1.8648
33 1I8T FAD 0.00005564 0.44352 1.90736
34 4USI AKG 0.01012 0.44775 1.94805
35 1N2X SAM 0.005629 0.41461 1.99336
36 2BKX F6R 0.02143 0.40971 2.06612
37 1LUA NAP 0.008663 0.41231 2.09059
38 4C3Y FAD 0.00001336 0.48574 2.0979
39 5TS5 FAD 0.000002217 0.48077 2.0979
40 4C3Y ANB 0.00004844 0.47154 2.0979
41 1KNR FAD 0.0000114 0.46272 2.0979
42 5JJR SAH 0.005647 0.42718 2.0979
43 1GPE FAD 0.00006255 0.42232 2.0979
44 4MOP 2H5 0.0000301 0.41091 2.0979
45 1M2W NAD 0.01106 0.40201 2.0979
46 1LJ8 NAD 0.01382 0.40048 2.0979
47 4N49 SAM 0.0007195 0.46038 2.1028
48 5MGZ SAH 0.006087 0.42233 2.11864
49 2CVQ NDP 0.004483 0.40529 2.14067
50 1I36 NAP 0.003301 0.42769 2.27273
51 4NEC SAH 0.0185 0.40951 2.27273
52 4DMG SAM 0.002969 0.45656 2.29008
53 5DX8 SFG 0.0008285 0.45027 2.29226
54 5DXA SFG 0.0008309 0.45022 2.29226
55 5DX0 SFG 0.0002214 0.4024 2.29226
56 1ORR NAD 0.0007622 0.42436 2.30548
57 4R6W SAH 0.003668 0.40146 2.32558
58 2GV8 FAD 0.00000043 0.53968 2.331
59 1DJN ADP 0.000009147 0.53404 2.331
60 1VQW FAD 0.000000285 0.52611 2.331
61 2GVC FAD 0.0000003149 0.52464 2.331
62 4G74 FAD 0.00003062 0.46598 2.331
63 2GV8 NDP 0.001603 0.43474 2.331
64 2C7G FAD 0.008823 0.42235 2.331
65 2C7G ODP 0.009078 0.42111 2.331
66 4G74 UQ5 0.00006559 0.41498 2.331
67 1L7E NAI 0.003215 0.42201 2.34375
68 1ZH8 NAP 0.006981 0.40011 2.35294
69 3CMC NAD 0.00539 0.40919 2.39521
70 5MPT SAH 0.004224 0.43302 2.41546
71 4MO2 FDA 0.00004253 0.45623 2.44565
72 4MO2 FAD 0.00004591 0.45066 2.44565
73 5EOW FAD 0.00009207 0.44314 2.46914
74 1F3L SAH 0.001067 0.44909 2.49221
75 1Q1R FAD 0.00001456 0.47257 2.5641
76 3QVP FAD 0.00006542 0.46335 2.5641
77 3OZ2 FAD 0.00003711 0.44531 2.5641
78 4KRG SAH 0.004492 0.43541 2.5641
79 2UYQ SAM 0.03855 0.41061 2.58065
80 3KLJ FAD 0.00000363 0.48872 2.5974
81 1F8G NAD 0.002155 0.43578 2.60417
82 1LK7 DER 0.01913 0.41571 2.62009
83 3L4S NAD 0.001423 0.41687 2.67857
84 3L4S 3PG 0.001697 0.41154 2.67857
85 3BGD SAH 0.002523 0.42955 2.69231
86 3BGD PM6 0.003778 0.41078 2.69231
87 2Q1W NAD 0.0006012 0.42816 2.7027
88 4LWP SAH 0.0006441 0.47077 2.71739
89 3MQ2 SAH 0.02405 0.40088 2.75229
90 4RPL FAD 0.00006691 0.48073 2.75689
91 4RPL 3UC 0.0001126 0.47449 2.75689
92 4USR FAD 0.0000004423 0.54365 2.77008
93 3CIF NAD 0.0000918 0.42693 2.78552
94 3CIF G3H 0.00141 0.40487 2.78552
95 2PXX SAH 0.002854 0.43726 2.7907
96 5JCA FAD 0.000004365 0.50458 2.7972
97 5JCA NDP 0.00001504 0.50367 2.7972
98 1YQZ FAD 0.00001931 0.49769 2.7972
99 1E1M FAD 0.00002583 0.48803 2.7972
100 1E1M NAP 0.00002583 0.48803 2.7972
101 4YNU FAD 0.00003463 0.47455 2.7972
102 4YNU LGC 0.00007985 0.46573 2.7972
103 1MUU NAD 0.0007601 0.445 2.7972
104 1H82 FAD 0.00001404 0.41311 2.7972
105 4HA6 FAD 0.01066 0.41021 2.7972
106 3NJ4 NAD 0.02035 0.40508 2.7972
107 3OND ADN 0.003648 0.4037 2.7972
108 3OND NAD 0.003648 0.4037 2.7972
109 1WD4 AHR 0.04994 0.40117 2.7972
110 1ELI PYC 0.00004975 0.46132 2.82776
111 3OA2 NAD 0.003945 0.40747 2.83019
112 1LSS NAD 0.00001487 0.53521 2.85714
113 3SSO SAH 0.0003214 0.43493 2.86396
114 1P77 ATR 0.001787 0.4836 2.94118
115 4ZCC FAD 0.00003237 0.41448 2.97619
116 4ZCC NAI 0.00003237 0.41448 2.97619
117 3LZW NAP 0.008702 0.42401 3.01205
118 3LZW FAD 0.0037 0.42372 3.01205
119 2IVD FAD 0.000003053 0.50125 3.0303
120 3DMH SAM 0.002368 0.43739 3.0303
121 1QMG APX 0.002419 0.43034 3.0303
122 3DMH GMP 0.003449 0.41236 3.0303
123 2RG0 CBI 0.03907 0.40692 3.0303
124 1GTE FAD 0.00001323 0.40404 3.0303
125 4JK3 NAD 0.001159 0.43431 3.0888
126 4J4H 1J1 0.003296 0.40444 3.0888
127 4J4H NAI 0.003296 0.40444 3.0888
128 1I1N SAH 0.00321 0.41361 3.09735
129 1L1E SAH 0.003773 0.42839 3.13589
130 1KPG SAH 0.004519 0.42174 3.13589
131 1KPH SAH 0.004814 0.42054 3.13589
132 3NYC IAR 0.00001289 0.42308 3.14961
133 3NYC FAD 0.00001289 0.42308 3.14961
134 3GU3 SAH 0.00412 0.45395 3.16901
135 2B4R NAD 0.000171 0.42444 3.18841
136 2B4R AES 0.0002874 0.4137 3.18841
137 2Q0L FAD 0.000006823 0.46416 3.21543
138 2Q0L NAP 0.001752 0.45893 3.21543
139 4IV9 FAD 0.000005193 0.49909 3.2634
140 1COY FAD 0.00001392 0.4851 3.2634
141 1COY AND 0.00005753 0.47794 3.2634
142 5EB4 FAD 0.00002037 0.47784 3.2634
143 3G5S FAD 0.00002669 0.46953 3.2634
144 1OBB NAD 0.003512 0.4204 3.2634
145 2DT5 NAD 0.0008937 0.43282 3.31754
146 1NYT NAP 0.005733 0.4087 3.32103
147 1CER NAD 0.0002884 0.45884 3.32326
148 5KMS FAD 0.00005243 0.45776 3.45679
149 1V59 NAD 0.0000001354 0.67478 3.4965
150 3IHG FAD 0.000003099 0.52945 3.4965
151 1RSG FAD 0.000002897 0.47263 3.4965
152 1V59 FAD 0.00000823 0.44583 3.4965
153 4LHD GLY 0.03828 0.40738 3.4965
154 1J0X NAD 0.0004833 0.43189 3.61446
155 4ONQ SFG 0.01121 0.41337 3.64146
156 1L3I SAH 0.003025 0.4202 3.64583
157 4EMI NAD 0.00009554 0.4723 3.65854
158 4EMI FAD 0.00003532 0.46661 3.65854
159 5HJM MTA 0.0005445 0.46985 3.69318
160 2CDU FAD 0.000004797 0.49434 3.7296
161 4OPC FDA 0.0001082 0.49102 3.7296
162 4OPC PGT 0.0001437 0.48983 3.7296
163 2WPF FAD 0.0001223 0.48775 3.7296
164 2WPF WPF 0.0001653 0.48416 3.7296
165 1NAA 6FA 0.000006865 0.4575 3.7296
166 3LAD FAD 0.00002564 0.4431 3.7296
167 5HSA FAS 0.00008461 0.43163 3.7296
168 2CDU ADP 0.000004728 0.42308 3.7296
169 2IID PHE 0.000006834 0.42256 3.7296
170 2IID FAD 0.000006834 0.42256 3.7296
171 1NAA ABL 0.00001191 0.42026 3.7296
172 1ZK7 FAD 0.009832 0.41337 3.7296
173 5EVY FAD 0.006468 0.41202 3.7296
174 3GDH SAH 0.002393 0.42741 3.73444
175 1X14 NAD 0.0003016 0.49072 3.74065
176 4XFR CIT 0.01147 0.43438 3.74707
177 2DC1 NAD 0.005467 0.40436 3.81356
178 5CAE COA 0.004608 0.41543 3.83387
179 4ZRN NAD 0.00118 0.41488 3.84615
180 5GWX SAR 0.00544 0.407 3.87324
181 5GWX SAM 0.00544 0.407 3.87324
182 5LKC FUC GLA A2G 0.0297 0.41168 3.8961
183 5X62 SAH 0.002807 0.44505 3.94089
184 3UCL FAD 0.000004634 0.52595 3.9627
185 3UCL CYH 0.000004634 0.52595 3.9627
186 3UCL NAP 0.000005451 0.52595 3.9627
187 2BRY FAD 0.000003894 0.50883 3.9627
188 4TXI FAD 0.00001011 0.49731 3.9627
189 4M52 FAD 0.00001028 0.49116 3.9627
190 5JWC FAD 0.00005102 0.46125 3.9627
191 1YY5 FAD 0.000005433 0.45751 3.9627
192 2JJQ SAH 0.002461 0.45612 3.9627
193 2A8X FAD 0.00001814 0.44369 3.9627
194 2RGJ FAD 0.000006088 0.50168 3.9801
195 2R4J FAD 0.000001608 0.53183 3.99202
196 2R4J 13P 0.000001608 0.53183 3.99202
197 2Q7V FAD 0.000002931 0.50942 4
198 3EVG SAH 0.01433 0.40843 4
199 1KYQ NAD 0.00009403 0.51458 4.0146
200 3A4T SFG 0.0007983 0.45459 4.0146
201 3VSE SAH 0.001954 0.4657 4.0201
202 2EG5 SAH 0.007679 0.43177 4.03226
203 5UAV TFB 0.000689 0.41836 4.03727
204 5UAV NDP 0.000689 0.41836 4.03727
205 2NAD NAD 0.001311 0.4061 4.07125
206 3O7W SAM 0.01902 0.41228 4.08163
207 2J5V PCA 0.02512 0.4368 4.08719
208 5N53 8NB 0.02148 0.42613 4.10256
209 3EB9 FLC 0.01021 0.41212 4.13534
210 2F5X ASP 0.02479 0.42163 4.16667
211 5LD5 NAD 0.0005491 0.45792 4.18994
212 5FJN FAD 0.0000003093 0.54607 4.1958
213 5FJN BE2 0.0000004082 0.54607 4.1958
214 3PT9 SAH 0.00075 0.46772 4.1958
215 4HXY NDP 0.003542 0.40438 4.1958
216 1ZEM NAD 0.002275 0.4224 4.19847
217 3FG2 FAD 0.00001781 0.48449 4.20792
218 2D2I NAP 0.0004374 0.46215 4.21053
219 5F8F SFG 0.008648 0.4255 4.24403
220 3G2O SAM 0.0002813 0.48738 4.34783
221 3LKZ SFG 0.004154 0.42987 4.36137
222 2PV7 NAD 0.002294 0.41944 4.36242
223 2FK8 SAM 0.004345 0.42566 4.40252
224 1VE3 SAM 0.009132 0.41751 4.40529
225 3B20 NAD 0.00131 0.43843 4.42478
226 4JX1 CAH 0.01722 0.42225 4.42478
227 3OJO NAD 0.00007243 0.49558 4.4289
228 2XVF FAD 0.000003962 0.49195 4.4289
229 1X87 NAD 0.0005238 0.4588 4.4289
230 2VDV SAM 0.0006888 0.48332 4.47154
231 1FWV SGA MAG FUC 0.001578 0.49762 4.47761
232 1RKX NAD 0.001913 0.41457 4.48179
233 2VYN NAD 0.0001302 0.46568 4.49102
234 3KB6 NAD 0.005895 0.40305 4.49102
235 4YMH SAH 0.0007471 0.45966 4.58333
236 3DXY SAM 0.0004884 0.49598 4.58716
237 2HNK SAH 0.003616 0.42921 4.60251
238 3GWZ SAH 0.02247 0.4054 4.60705
239 5TUK FAD 0.00007177 0.47955 4.65686
240 2XVE FAD 0.000008118 0.51289 4.662
241 3E1T FAD 0.000004429 0.5057 4.662
242 1PS9 FAD 0.00000697 0.4959 4.662
243 1PN0 FAD 0.00002919 0.48072 4.662
244 1PN0 IPH 0.00003128 0.48072 4.662
245 4RSL FAD 0.0002196 0.43585 4.662
246 3ITJ FAD 0.00005071 0.47405 4.73373
247 5O4J SAH 0.001004 0.40771 4.74453
248 5O4J 9KH 0.001004 0.40771 4.74453
249 5O4J PJL 0.001118 0.40349 4.74453
250 3GRU AMP 0.00008535 0.49253 4.74576
251 4NTC FAD 0.00001987 0.45059 4.77612
252 5ULP KB1 0.003712 0.41939 4.85075
253 5TUF FAD 0.00003677 0.47632 4.88998
254 1UWK NAD 0.0009887 0.42263 4.8951
255 1UWK URO 0.0009887 0.42263 4.8951
256 5JE8 NAD 0.002337 0.42484 4.96689
257 1D1Q 4NP 0.01738 0.43134 4.96894
258 3HVJ 705 0.0002104 0.43213 4.97738
259 5TVA AMP 0.03404 0.40644 5
260 1DL5 SAH 0.002247 0.42262 5.04732
261 1N4W FAD 0.00001955 0.48234 5.12821
262 3AYI HCI 0.00003917 0.48129 5.12821
263 3AYI FAD 0.00003679 0.48129 5.12821
264 4D04 FAD 0.000009533 0.40019 5.12821
265 4D04 NAP 0.000009533 0.40019 5.12821
266 3VYW SAM 0.0009018 0.45602 5.19481
267 4UTU LRY 0.0137 0.41935 5.24017
268 4UTW RFW 0.02233 0.40553 5.24017
269 2EJU SAH 0.004805 0.43043 5.29101
270 1ZMD NAI 0.0000018 0.55348 5.36131
271 2F5Z FAD 0.000008217 0.49598 5.36131
272 5WGR FAD 0.000006416 0.47003 5.36131
273 2GMH FAD 0.000007506 0.46307 5.36131
274 1ZMD FAD 0.00000766 0.45481 5.36131
275 5MW4 5JU 0.00299 0.40022 5.38922
276 4OBW SAM 0.01377 0.40923 5.44747
277 5E8J SAH 0.001794 0.46287 5.44872
278 2AOT SAH 0.002107 0.45508 5.47945
279 1JQD SAH 0.005503 0.40178 5.47945
280 1GUZ NAD 0.002193 0.4175 5.48387
281 3OFK SAH 0.001845 0.43872 5.55556
282 1TPY SAH 0.004232 0.42298 5.57491
283 5FA8 SAM 0.003068 0.42591 5.59006
284 3NKS FAD 0.00006222 0.4508 5.59441
285 4IWN GEK 0.003134 0.42552 5.67686
286 2VOH CIT 0.009213 0.45029 5.73248
287 1Y8Q ATP 0.00005742 0.49554 5.78035
288 3EGI ADP 0.0009744 0.49784 5.82524
289 5MBX SP5 0.000009784 0.50481 5.82751
290 5MBX FAD 0.000009784 0.50481 5.82751
291 2YG3 FAD 0.000003044 0.48095 5.82751
292 1WDK NAD 0.0002436 0.47303 5.82751
293 3NTD FAD 0.0000302 0.46903 5.82751
294 4XUC SAM 0.0003932 0.42078 5.9633
295 4XUC 43G 0.0003932 0.42078 5.9633
296 3GFB NAD 0.005824 0.40326 6
297 3GCZ SAM 0.01406 0.40881 6.02837
298 1VL1 CIT 0.0343 0.4185 6.03448
299 1LVL FAD 0.0006882 0.45815 6.06061
300 2YVF NAD 0.0174 0.41332 6.12745
301 2YVF FAD 0.01681 0.41332 6.12745
302 1E6E FAD 0.000004172 0.49648 6.25
303 4RDH AMP 0.0003367 0.49341 6.25
304 1YXM ADE 0.03883 0.40356 6.27063
305 1WY7 SAH 0.002548 0.4326 6.28019
306 1JNR FAD 0.0002452 0.46576 6.29371
307 4UP3 FAD 0.00005637 0.462 6.36943
308 4JNA FAD 0.00005266 0.43399 6.47059
309 4D79 ATP 0.0006667 0.47008 6.52174
310 4XZ3 COA 0.006167 0.41291 6.52174
311 1P1C SAH 0.00008585 0.40909 6.53266
312 3ZNN 4WL 0.00005525 0.47859 6.62824
313 3ZNN FAD 0.00005525 0.47859 6.62824
314 2DPM SAM 0.00577 0.4171 6.69014
315 5JCM FAD 0.00001738 0.50309 6.75991
316 5JCM NAD 0.00001833 0.50309 6.75991
317 5JCM ISD 0.00001833 0.50309 6.75991
318 2RGO FAD 0.000002525 0.49874 6.75991
319 4REP FAD 0.00001154 0.48529 6.86869
320 3H2B SAH 0.002742 0.43805 6.89655
321 2HK9 ATR 0.0003358 0.50999 6.90909
322 2HK9 NAP 0.00154 0.42929 6.90909
323 1NE7 AGP 0.02706 0.40467 6.92042
324 1QAN SAH 0.0004578 0.46512 6.96721
325 1BXK NAD 0.0006692 0.43776 7.04225
326 3T7S SAM 0.003005 0.43986 7.08955
327 5EZ7 FAD 0.00000199 0.51252 7.14286
328 1C0I FAD 0.019 0.40171 7.16253
329 1C0I BE2 0.019 0.40171 7.16253
330 4BVA NDP 0.002994 0.40716 7.16418
331 1D4D FAD 0.000001564 0.52207 7.16783
332 3KU0 ADE 0.04756 0.40696 7.17131
333 1O94 ADP 0.00001537 0.43623 7.19697
334 1QO8 FAD 0.000002138 0.51577 7.22611
335 1Q9I FAD 0.00001414 0.40907 7.22611
336 1Q9I TEO 0.00001414 0.40907 7.22611
337 3L9W GSH 0.0006819 0.43744 7.26392
338 3L9W AMP 0.0009457 0.42621 7.26392
339 1BW9 NAD 0.001403 0.44391 7.30337
340 1C1X NAD 0.0009286 0.43822 7.32394
341 5BVA FAD 0.000001185 0.47447 7.33496
342 2ZIF SAM 0.002957 0.43656 7.40741
343 4USQ FAD 0.0009091 0.44294 7.47922
344 3TLJ SAH 0.002124 0.43276 7.5067
345 5UAO FAD 0.0004587 0.42705 7.57856
346 2VVM FAD 0.00001826 0.47953 7.69231
347 2VVL FAD 0.00001845 0.45213 7.69231
348 3FPZ AHZ 0.004175 0.44816 7.97546
349 4YSX FAD 0.000004169 0.4771 7.97872
350 2XVM SAH 0.006372 0.43577 8.0402
351 2I7C AAT 0.001866 0.40765 8.12721
352 4JDR FAD 0.000004994 0.5011 8.15851
353 2JB2 FAD 0.00001928 0.45965 8.15851
354 2JB2 PHE 0.00002103 0.45425 8.15851
355 4YCA NDP 0.000153 0.47003 8.16327
356 2G5C NAD 0.004336 0.40341 8.18505
357 5H81 NAP 0.002883 0.43026 8.22622
358 3EGV SAH 0.001619 0.45633 8.26772
359 2NXE SAM 0.001735 0.45089 8.26772
360 4FZV SAM 0.006104 0.41909 8.3682
361 1OMO NAD 0.0003225 0.46403 8.38509
362 1FL2 FAD 0.00002492 0.45656 8.3871
363 2E5V FAD 0.000001298 0.52501 8.39161
364 1G55 SAH 0.004725 0.42733 8.45481
365 2OOR NAD 0.003105 0.42885 8.62069
366 3WGT QSC 0.00002413 0.48487 8.64553
367 3WGT FAD 0.00002362 0.4841 8.64553
368 1KYZ SAH 0.007711 0.42432 8.76712
369 5L95 AMP 0.0005997 0.46795 8.96057
370 4JCA CIT 0.02123 0.42848 8.98204
371 2HMT NAI 0.02147 0.40113 9.02778
372 3QH2 3NM 0.02071 0.4259 9.04977
373 1NVT NAP 0.001233 0.43954 9.05923
374 5G3U FDA 0.00001381 0.4811 9.45626
375 5G3U ITW 0.00008127 0.46109 9.45626
376 3FZG SAM 0.0167 0.41167 9.5
377 4AP3 FAD 0.000001318 0.42546 9.55711
378 4AP3 NAP 0.000001318 0.42546 9.55711
379 4QTU SAM 0.0009011 0.45995 9.62963
380 5GZ6 NDP 0.001585 0.44513 9.81595
381 5GZ6 7C3 0.002542 0.42941 9.81595
382 2YVJ FAD 0.00001204 0.48176 10.0917
383 2YVJ NAI 0.000006238 0.41957 10.0917
384 3AD8 NAD 0.000009007 0.49174 10.101
385 1NV8 MEQ 0.002179 0.42034 10.2113
386 1NV8 SAM 0.00254 0.41499 10.2113
387 3AB1 FAD 0.000001787 0.51568 10.2778
388 4EMJ FAD 0.00003946 0.44923 10.2804
389 2Y6Q I7T 0.00008453 0.46269 10.3015
390 2Y6Q FAD 0.00001745 0.46159 10.3015
391 3RNM FAD 0.000007781 0.45458 10.3448
392 1O8B ABF 0.02129 0.42102 10.5023
393 1JQ3 AAT 0.00341 0.40036 10.8108
394 3CYI ATP 0.04616 0.41008 10.9091
395 3QJ4 FAD 0.000004048 0.48651 11.4035
396 4J56 FAD 0.00001403 0.48881 11.8299
397 4II2 ATP 0.0001566 0.48981 12.0482
398 4CNK FAD 0.000003422 0.50262 12.532
399 1GET NAP 0.00001784 0.5061 13.5198
400 1GET FAD 0.00001611 0.5061 13.5198
401 2PZM UDP 0.0008378 0.42323 13.6364
402 2PZM NAD 0.0008378 0.42323 13.6364
403 2GND MAN 0.03237 0.41399 14.2857
404 2GMM MAN MAN 0.0399 0.40731 14.2857
405 3QFA FAD 0.00005837 0.46394 14.6552
406 1L7N ALF 0.003671 0.46819 14.6919
407 2HQM FAD 0.000002695 0.51214 15.0313
408 5E5U MLI 0.0006976 0.51424 15.5779
409 3LU1 NAD 0.0009651 0.42865 15.9341
410 5U8U FAD 0.00003533 0.49218 16.7832
411 4TM3 FAD 0.000001104 0.55269 17.4825
412 1NPD NAD 0.003722 0.41934 18.75
413 5ODQ FAD 0.00003233 0.44032 19.244
414 2FKA BEF 0.001816 0.47873 23.2558
415 1JG3 ADN 0.0002471 0.41178 25.1064
416 3S5W FAD 0.000000006807 0.62179 26.3403
417 3S5W NAP 0.004224 0.44052 26.3403
418 5FA5 MTA 0.001131 0.46809 40
Pocket No.: 2; Query (leader) PDB : 4D7E; Ligand: FAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 4d7e.bio1) has 37 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 4D7E; Ligand: FAD; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 4d7e.bio2) has 35 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 4D7E; Ligand: FAD; Similar sites found: 22
This union binding pocket(no: 4) in the query (biounit: 4d7e.bio2) has 36 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3ZH4 FLC 0.02606 0.42804 1.67064
2 1F20 NAP 0.02885 0.40228 1.8648
3 5DWQ SFG 0.0001844 0.40415 2.29226
4 3GGO ENO 0.003166 0.40345 2.54777
5 3GGO NAI 0.003166 0.40345 2.54777
6 4Y2H SAH 0.002959 0.40148 2.55682
7 4Y2H 49K 0.003081 0.40084 2.55682
8 4JGT PYR 0.0253 0.42884 2.67559
9 1TDF FAD 0.01841 0.4048 3.16456
10 3HAD NAD 0.002932 0.4102 3.24675
11 4M73 M72 0.002014 0.40532 4.1543
12 4M73 SAH 0.002453 0.4011 4.1543
13 1QCI ADE 0.04862 0.40458 4.19847
14 1FQK ALF 0.03294 0.41525 5.23077
15 3WV8 ATP 0.00002195 0.41753 5.50459
16 1XCL SAH 0.001137 0.40226 5.53191
17 1QKQ MAN 0.0434 0.40858 7.74648
18 2OOR TXP 0.006306 0.40077 8.62069
19 1VDC FAD 0.01835 0.40565 8.70871
20 1NVM NAD 0.001113 0.40693 9.29487
21 2O07 SPD 0.000625 0.40623 9.86842
22 2O07 MTA 0.0005644 0.40085 9.86842
Feedback