Receptor
PDB id Resolution Class Description Source Keywords
3ZW2 1.6 Å NON-ENZYME: BINDING STRUCTURE OF THE LECTIN BAMBL FROM BURKHOLDERIA AMBIFARIA IN WITH BLOOD GROUP H TYPE 1 TETRASACCHARIDE BURKHOLDERIA AMBIFARIA SUGAR BINDING PROTEIN CYSTIC FIBROSIS B-PROPELLER HUMAN HISTO-BLOOD GROUP
Ref.: FUCOSE-BINDING LECTIN FROM OPPORTUNISTIC PATHOGEN BURKHOLDERIA AMBIFARIA BINDS TO BOTH PLANT AND HUMA OLIGOSACCHARIDIC EPITOPES. J.BIOL.CHEM. V. 287 4335 2012
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GAL FUC A:112;
Valid;
none;
submit data
326.298 n/a O(C1C...
GLA NAG GAL FUC C:100;
Valid;
none;
Kd = 26.1 uM
691.633 n/a O=C(N...
NAG GAL FUC A:101;
B:101;
B:111;
C:111;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
529.492 n/a O=C(N...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3ZW2 1.6 Å NON-ENZYME: BINDING STRUCTURE OF THE LECTIN BAMBL FROM BURKHOLDERIA AMBIFARIA IN WITH BLOOD GROUP H TYPE 1 TETRASACCHARIDE BURKHOLDERIA AMBIFARIA SUGAR BINDING PROTEIN CYSTIC FIBROSIS B-PROPELLER HUMAN HISTO-BLOOD GROUP
Ref.: FUCOSE-BINDING LECTIN FROM OPPORTUNISTIC PATHOGEN BURKHOLDERIA AMBIFARIA BINDS TO BOTH PLANT AND HUMA OLIGOSACCHARIDIC EPITOPES. J.BIOL.CHEM. V. 287 4335 2012
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 3ZWE - FUC C6 H12 O5 C[C@H]1[C@....
2 3ZZV - NAG GAL FUC n/a n/a
3 3ZW2 Kd = 26.1 uM GLA NAG GAL FUC n/a n/a
70% Homology Family (13)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 3ZWE - FUC C6 H12 O5 C[C@H]1[C@....
2 3ZZV - NAG GAL FUC n/a n/a
3 3ZW2 Kd = 26.1 uM GLA NAG GAL FUC n/a n/a
4 5AJB Kd = 25.7 uM FUC NAG GLA GAL n/a n/a
5 5O7V Kd = 52.4 uM FUC NAG GLA GAL n/a n/a
6 5O7U Kd = 52.1 uM FUC NAG GAL GAL n/a n/a
7 2BT9 Kd = 0.64 uM MFU C7 H14 O5 C[C@H]1[C@....
8 2BS6 - XYS GAL FUC n/a n/a
9 4I6S - FUL C6 H12 O5 C[C@H]1[C@....
10 5AJC - FUC NAG n/a n/a
11 3ZI8 - FU4 C6 H12 O4 C[C@H]1[C@....
12 2BS5 Kd = 250 nM BGC GAL FUC n/a n/a
13 5O7W Kd = 67.8 uM FUC NAG GLA GAL n/a n/a
50% Homology Family (13)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 298 families.
1 3ZWE - FUC C6 H12 O5 C[C@H]1[C@....
2 3ZZV - NAG GAL FUC n/a n/a
3 3ZW2 Kd = 26.1 uM GLA NAG GAL FUC n/a n/a
4 5AJB Kd = 25.7 uM FUC NAG GLA GAL n/a n/a
5 5O7V Kd = 52.4 uM FUC NAG GLA GAL n/a n/a
6 5O7U Kd = 52.1 uM FUC NAG GAL GAL n/a n/a
7 2BT9 Kd = 0.64 uM MFU C7 H14 O5 C[C@H]1[C@....
8 2BS6 - XYS GAL FUC n/a n/a
9 4I6S - FUL C6 H12 O5 C[C@H]1[C@....
10 5AJC - FUC NAG n/a n/a
11 3ZI8 - FU4 C6 H12 O4 C[C@H]1[C@....
12 2BS5 Kd = 250 nM BGC GAL FUC n/a n/a
13 5O7W Kd = 67.8 uM FUC NAG GLA GAL n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GAL FUC; Similar ligands found: 238
No: Ligand ECFP6 Tc MDL keys Tc
1 GAL FUC 1 1
2 BMA GAL 0.615385 0.941176
3 MAB 0.615385 0.941176
4 BGC BMA 0.615385 0.941176
5 B2G 0.615385 0.941176
6 CBI 0.615385 0.941176
7 CBK 0.615385 0.941176
8 GLC GAL 0.615385 0.941176
9 GLA GLA 0.615385 0.941176
10 GAL BGC 0.615385 0.941176
11 LBT 0.615385 0.941176
12 N9S 0.615385 0.941176
13 MAL 0.615385 0.941176
14 LAT 0.615385 0.941176
15 BGC GAL 0.615385 0.941176
16 GLA GAL 0.615385 0.941176
17 GLA MAN RAM ABE 0.597222 0.891892
18 CEY 0.571429 0.941176
19 GLC BGC GLC 0.571429 0.941176
20 GLC BGC BGC BGC 0.571429 0.941176
21 DXI 0.571429 0.941176
22 BGC BGC BGC 0.571429 0.941176
23 BGC BGC BGC GLC 0.571429 0.941176
24 MAN BMA BMA BMA BMA 0.571429 0.941176
25 BMA BMA BMA BMA BMA 0.571429 0.941176
26 MAN BMA BMA 0.571429 0.941176
27 BGC BGC BGC BGC 0.571429 0.941176
28 BGC BGC GLC 0.571429 0.941176
29 BGC GLC GLC GLC GLC 0.571429 0.941176
30 BGC BGC BGC BGC BGC BGC 0.571429 0.941176
31 MAN BMA BMA BMA BMA BMA 0.571429 0.941176
32 GLC GLC BGC 0.571429 0.941176
33 BGC GLC GLC GLC 0.571429 0.941176
34 GLC BGC BGC 0.571429 0.941176
35 CTT 0.571429 0.941176
36 CE8 0.571429 0.941176
37 BMA BMA BMA BMA BMA BMA 0.571429 0.941176
38 GLA GAL GLC 0.571429 0.941176
39 CT3 0.571429 0.941176
40 GAL GAL GAL 0.571429 0.941176
41 B4G 0.571429 0.941176
42 GLC BGC BGC BGC BGC BGC 0.571429 0.941176
43 MLR 0.571429 0.941176
44 GLC GAL GAL 0.571429 0.941176
45 CE5 0.571429 0.941176
46 CE6 0.571429 0.941176
47 BMA MAN BMA 0.571429 0.941176
48 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.571429 0.941176
49 BGC BGC BGC BGC BGC 0.571429 0.941176
50 GLA GAL BGC 0.571429 0.941176
51 MT7 0.571429 0.941176
52 BGC GLC GLC GLC GLC GLC GLC 0.571429 0.941176
53 BGC GLC GLC 0.571429 0.941176
54 MTT 0.571429 0.941176
55 GLC GLC GLC GLC GLC 0.571429 0.941176
56 CTR 0.571429 0.941176
57 BMA BMA BMA 0.571429 0.941176
58 GLC BGC BGC BGC BGC 0.571429 0.941176
59 MAN MAN BMA BMA BMA BMA 0.571429 0.941176
60 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.571429 0.941176
61 CEX 0.571429 0.941176
62 BQZ 0.56 0.909091
63 MAN GLC 0.555556 0.941176
64 NGR 0.555556 0.941176
65 LB2 0.555556 0.941176
66 M3M 0.555556 0.941176
67 GLA MBG 0.537037 0.942857
68 2M4 0.537037 0.941176
69 TRE 0.531915 0.941176
70 GLA GAL GAL 0.52459 0.941176
71 LAT GLA 0.509091 0.941176
72 MMA MAN 0.508772 0.942857
73 DR5 0.508772 0.942857
74 BGC BGC BGC GLC BGC BGC 0.508475 0.941176
75 GLC BGC BGC BGC BGC BGC BGC 0.508475 0.941176
76 GLA EGA 0.508475 0.942857
77 FUC BGC GAL 0.492308 0.970588
78 BGC BGC BGC BGC BGC BGC BGC BGC 0.492308 0.941176
79 BMA MAN MAN MAN 0.492063 0.941176
80 NOY BGC 0.491803 0.666667
81 BGC GLA GAL FUC 0.486111 0.970588
82 XYT 0.484375 0.727273
83 CGC 0.483871 0.941176
84 M13 0.482759 0.942857
85 MDM 0.482759 0.942857
86 GAL MBG 0.482759 0.942857
87 GLA MAN RAM RAM ABE MAN GLA 0.477778 0.868421
88 FUC GAL GLC 0.477612 0.970588
89 GLC GAL FUC 0.477612 0.970588
90 LAT FUC 0.477612 0.970588
91 8B7 0.477612 0.970588
92 BGC GAL FUC 0.477612 0.970588
93 GAL GAL FUC 0.476923 0.970588
94 FUC GLA GLA 0.476923 0.970588
95 GLA GLA FUC 0.476923 0.970588
96 FUC GAL GLA 0.476923 0.970588
97 GLA GAL FUC 0.476923 0.970588
98 MAN MAN BMA 0.47541 0.941176
99 BMA BMA MAN 0.47541 0.941176
100 BGC BGC 0.474576 0.861111
101 BMA BMA 0.474576 0.861111
102 GAL BGC BGC XYS 0.472222 0.888889
103 A2G GAL 0.46875 0.733333
104 NDG GAL 0.46875 0.733333
105 NLC 0.46875 0.733333
106 GAL MGC 0.46875 0.702128
107 GAL NGA 0.46875 0.733333
108 GAL A2G 0.46875 0.733333
109 8VZ 0.46875 0.673469
110 GAL NDG 0.46875 0.733333
111 ABD 0.467532 0.75
112 U63 0.466667 0.842105
113 GLC ACI GLD GLC 0.4625 0.733333
114 GLC G6D ADH GLC 0.4625 0.733333
115 GLC ACI G6D BGC 0.4625 0.733333
116 GLC G6D ACI GLC 0.4625 0.733333
117 MVP 0.460317 0.695652
118 T6P 0.457627 0.727273
119 RZM 0.457627 0.652174
120 BMA BMA GLA BMA BMA 0.457143 0.941176
121 GLC GLC XYP 0.455882 0.941176
122 GLC GAL NAG GAL 0.454545 0.733333
123 LAT NAG GAL 0.454545 0.733333
124 9MR 0.451613 0.704545
125 IFM BGC 0.451613 0.673913
126 IFM BMA 0.451613 0.673913
127 MAL EDO 0.451613 0.888889
128 BMA IFM 0.451613 0.673913
129 DOM 0.45 0.888889
130 GAL GAL SO4 0.447761 0.627451
131 BGC GAL NAG GAL 0.447368 0.733333
132 GAL NAG GAL GLC 0.447368 0.733333
133 GLA GAL BGC 5VQ 0.446154 0.891892
134 MAN MNM 0.444444 0.666667
135 GLC GLC GLC BGC 0.442857 0.941176
136 QV4 0.440476 0.733333
137 GLC GLC G6D ACI GLC GLC GLC 0.440476 0.733333
138 MAN BMA MAN 0.439394 0.941176
139 GAL NDG FUC 0.438356 0.717391
140 GAL NAG MAN 0.438356 0.733333
141 FUC NDG GAL 0.438356 0.717391
142 ABL 0.4375 0.666667
143 BGC BGC BGC XYS GAL 0.435897 0.888889
144 5QP 0.435484 0.833333
145 BMA FRU 0.435484 0.794872
146 FRU GAL 0.435484 0.794872
147 P3M 0.434783 0.727273
148 MMA 0.431373 0.857143
149 MBG 0.431373 0.857143
150 GYP 0.431373 0.857143
151 AMG 0.431373 0.857143
152 GDQ GLC 0.430769 0.632653
153 GLA MAN ABE 0.430556 0.916667
154 MAN MAN MAN MAN 0.428571 0.941176
155 BGC OXZ 0.428571 0.632653
156 ABC 0.428571 0.695652
157 MAN MAN BMA MAN 0.428571 0.941176
158 GLA GAL GLC NBU 0.426471 0.846154
159 GAL NGA GLA BGC GAL 0.425 0.733333
160 GLA NAG GAL FUC 0.425 0.717391
161 GAL NAG GAL FUC 0.425 0.717391
162 NGA GAL BGC 0.424658 0.733333
163 NAG GAL GAL NAG GAL 0.423077 0.6875
164 GLC DMJ 0.421875 0.659574
165 NOJ GLC 0.421875 0.659574
166 FMO 0.421875 0.820513
167 MAN MAN MAN GLC 0.42029 0.941176
168 FUC GAL 0.419355 1
169 MAG FUC GAL 0.418919 0.6875
170 XYS BGC BGC XYS BGC XYS BGC BGC BGC 0.417722 0.888889
171 BGC BGC BGC XYS BGC BGC 0.417722 0.888889
172 XYS BGC BGC BGC BGC XYS BGC BGC BGC 0.417722 0.888889
173 GLA 0.416667 0.848485
174 MLB 0.416667 0.941176
175 GLC BGC 0.416667 0.941176
176 MAN MAN 0.416667 0.941176
177 GAL GLC 0.416667 0.941176
178 BGC GLA 0.416667 0.941176
179 BMA GLA 0.416667 0.941176
180 ALL 0.416667 0.848485
181 GAL GAL 0.416667 0.941176
182 LAK 0.416667 0.941176
183 GXL 0.416667 0.848485
184 GLA GLC 0.416667 0.941176
185 GLA BGC 0.416667 0.941176
186 LSE 0.416667 0.6875
187 GIV 0.416667 0.848485
188 WOO 0.416667 0.848485
189 BGC GLC 0.416667 0.941176
190 BMA 0.416667 0.848485
191 MAN 0.416667 0.848485
192 MAN BMA 0.416667 0.941176
193 BMA MAN 0.416667 0.941176
194 BGC 0.416667 0.848485
195 GLA BMA 0.416667 0.941176
196 GLC 0.416667 0.848485
197 GAL 0.416667 0.848485
198 GLC GLC 0.416667 0.941176
199 G2I 0.414286 0.727273
200 LMU 0.414286 0.785714
201 LMT 0.414286 0.785714
202 UMQ 0.414286 0.785714
203 G3I 0.414286 0.727273
204 DMU 0.414286 0.785714
205 MAN DGO 0.412698 0.861111
206 GLA MMA ABE 0.410959 0.868421
207 MAN BMA NAG 0.410959 0.733333
208 GLA GAL NAG 0.410959 0.733333
209 MAN G63 0.409091 0.62
210 MAN MAN MAN BMA MAN 0.407895 0.941176
211 GLC ACI GLD GAL 0.406977 0.702128
212 GLC ACI G6D GLC 0.406977 0.702128
213 ISX 0.40625 0.72093
214 MAN MMA MAN 0.405797 0.942857
215 G2F BGC BGC BGC BGC BGC 0.405797 0.820513
216 NAG BMA 0.405797 0.653061
217 BMA MAN MAN MAN MAN 0.405405 0.941176
218 AAO 0.404494 0.733333
219 ARE 0.404494 0.733333
220 GLC GLC GLC GLC GLC BGC 0.403226 0.941176
221 GLC GLC GLC GLC BGC 0.403226 0.941176
222 MAN 7D1 0.403226 0.837838
223 GLC GLC GLC 0.403226 0.941176
224 BMA MAN MAN 0.403226 0.941176
225 MAN MAN MAN 0.403226 0.941176
226 4RS 0.402985 0.825
227 MAN BMA MAN MAN MAN 0.402778 0.941176
228 M5S 0.402778 0.941176
229 NAG GAL BGC 0.402597 0.733333
230 G1P 0.4 0.697674
231 BGC BGC BGC XYS BGC XYS GAL 0.4 0.888889
232 BGC BGC BGC FRU 0.4 0.820513
233 M1P 0.4 0.697674
234 GL1 0.4 0.697674
235 MAN IFM 0.4 0.688889
236 GLC IFM 0.4 0.688889
237 XGP 0.4 0.697674
238 GAL BGC BGC BGC XYS BGC XYS 0.4 0.888889
Ligand no: 2; Ligand: GLA NAG GAL FUC; Similar ligands found: 143
No: Ligand ECFP6 Tc MDL keys Tc
1 GLA NAG GAL FUC 1 1
2 GAL NAG GAL FUC 1 1
3 FUC GAL NAG GAL FUC 0.822785 0.978723
4 MAG FUC GAL 0.701299 0.958333
5 FUC NAG GLA GAL 0.694118 0.978723
6 FUC NDG GAL 0.679487 1
7 GAL NDG FUC 0.679487 1
8 BGC GAL NAG GAL FUC FUC 0.663043 0.978723
9 GLC GAL NAG GAL FUC FUC 0.663043 0.978723
10 FUC BGC GAL NAG GAL 0.648352 1
11 FUC BGC GAL 0.618421 0.73913
12 FUC BGC GAL NAG 0.617977 1
13 NAG GAL GAL NAG GAL 0.611765 0.958333
14 FUC NAG GAL 0.564706 0.92
15 GAL NAG 0.564103 0.978261
16 NAG GAL 0.564103 0.978261
17 GLA GAL NAG FUC GAL GLC 0.555556 1
18 GAL NGA A2G 0.554217 0.958333
19 GLC NAG GAL GAL FUC 0.552083 1
20 FUC GAL NAG GAL BGC 0.552083 1
21 GAL GLC NAG GAL FUC 0.552083 1
22 FUC NAG GAL FUC 0.551724 0.978723
23 FUC GAL NAG FUC 0.551724 0.978723
24 GAL NDG FUC FUC 0.551724 0.978723
25 GAL NAG FUC FUC 0.551724 0.978723
26 BCW 0.551724 0.978723
27 BDZ 0.551724 0.978723
28 FUC GAL NDG FUC 0.551724 0.978723
29 FUC NDG GAL FUC 0.551724 0.978723
30 LB2 0.549296 0.717391
31 M3M 0.549296 0.717391
32 NGR 0.549296 0.717391
33 MAN GLC 0.549296 0.717391
34 SGA MAG FUC 0.537634 0.692308
35 A2G GAL FUC 0.528736 1
36 NGA GAL FUC 0.528736 1
37 FUC GLA A2G 0.528736 1
38 FUC GAL A2G 0.528736 1
39 A2G GLA FUC 0.528736 1
40 BGC GAL NAG GAL 0.52809 0.978261
41 GAL NAG GAL GLC 0.52809 0.978261
42 G4S MAG FUC 0.526882 0.692308
43 GLC FUC GAL FUC A2G 0.526316 0.978723
44 BGC FUC GAL FUC A2G 0.526316 0.978723
45 FUC GAL GLA 0.525 0.73913
46 FUC GLA GLA 0.525 0.73913
47 GLA GLA FUC 0.525 0.73913
48 GAL GAL FUC 0.525 0.73913
49 GLA GAL FUC 0.525 0.73913
50 GAL NGA GLA BGC GAL 0.521739 0.978261
51 GLC BGC BGC BGC BGC BGC BGC 0.513158 0.717391
52 BGC BGC BGC GLC BGC BGC 0.513158 0.717391
53 DR3 0.511364 1
54 FUC GAL NAG A2G FUC 0.510204 0.938776
55 NAG GAL FUC FUC A2G 0.510204 0.938776
56 NAG FUC 0.506173 0.956522
57 NAG MAN BMA 0.505747 0.978261
58 GLC GAL NAG GAL 0.5 0.978261
59 NAG GAL FUC 0.5 1
60 FUL GAL NAG 0.5 1
61 GLC GAL NAG GAL FUC A2G 0.5 0.938776
62 LAT NAG GAL 0.5 0.978261
63 FUC NAG 0.5 0.9
64 DR2 0.5 1
65 GAL NGA 0.5 0.978261
66 GAL NAG FUC 0.5 1
67 FUC GAL NDG 0.5 1
68 BMA MAN MAN MAN 0.5 0.717391
69 NDG GAL FUC 0.5 1
70 A2G GAL NAG FUC GAL GLC 0.5 0.938776
71 FUC GAL NAG 0.5 1
72 GAL A2G 0.5 0.978261
73 A2G GAL 0.5 0.978261
74 A2G GAL BGC FUC 0.489796 1
75 GAL NAG GAL NAG GAL NAG 0.48913 0.938776
76 NAG GAL GAL NAG 0.48913 0.958333
77 GAL NAG GAL BGC 0.484211 0.9375
78 GLA GAL NAG 0.482759 0.978261
79 MAN BMA NAG 0.482759 0.978261
80 NLC 0.481481 0.978261
81 GAL MGC 0.481481 0.978723
82 GAL NDG 0.481481 0.978261
83 NDG GAL 0.481481 0.978261
84 BGC GLA GAL FUC 0.477778 0.73913
85 FUC GAL NAG NON FUC 0.475728 0.836364
86 SIA NAG GAL GAL 0.473214 0.867925
87 EAG RAM RAM GLC RAM NAG RAM RAM GLC RAM 0.466019 0.92
88 NGA GLA GAL BGC 0.463158 0.978261
89 NAG MAN BMA MAN NAG GAL 0.462264 0.958333
90 A2G GAL NAG FUC 0.46 0.938776
91 FUC GAL NAG A2G 0.46 0.938776
92 CGC 0.45679 0.717391
93 NAG GAL BGC 0.456522 0.978261
94 GAL NAG MAN 0.455556 0.978261
95 BGC GAL FUC 0.453488 0.73913
96 8B7 0.453488 0.73913
97 GLC GAL FUC 0.453488 0.73913
98 LAT FUC 0.453488 0.73913
99 FUC GAL GLC 0.453488 0.73913
100 GAL NAG GAL 0.451613 0.9375
101 GAL A2G MBN 0.451613 0.9375
102 8VZ 0.445783 0.938776
103 FUC C4W NAG BMA MAN 0.445455 0.884615
104 SIA GAL MAG FUC 0.444444 0.849057
105 FUC GAL 0.443038 0.717391
106 FUC C4W NAG BMA 0.442308 0.884615
107 NAG NAG BMA MAN 0.435644 0.884615
108 NDG FUC SIA GAL 0.432203 0.884615
109 SIA GAL NAG FUC 0.432203 0.884615
110 SIA GLA NAG FUC 0.432203 0.884615
111 NAG FUC SIA GAL 0.432203 0.884615
112 FUC NDG GAL SIA 0.432203 0.884615
113 SIA GAL NDG FUC 0.432203 0.884615
114 NAG NAG BMA 0.431579 0.884615
115 NAG NDG BMA 0.431579 0.884615
116 NAG BMA 0.430233 0.88
117 NGA GAL BGC 0.428571 0.978261
118 BGA 0.427184 0.836364
119 ACY 1GN GAL 1GN BGC ACY GAL BGC 0.427184 0.958333
120 1GN ACY GAL ACY 1GN BGC GAL BGC 0.427184 0.958333
121 NAG GAL NAG 0.425532 0.958333
122 GAL FUC 0.425 0.717391
123 MAN BMA MAN 0.423529 0.717391
124 GAL BGC NAG GAL 0.421053 0.978261
125 BGB 0.421053 0.648148
126 GAL NAG SIA GAL 0.420168 0.867925
127 GAL TNR 0.419355 0.865385
128 GAL SER A2G 0.419355 0.865385
129 A2G SER GAL 0.419355 0.865385
130 NGA SER GAL 0.419355 0.865385
131 GAL LOG 0.41573 0.789474
132 BGC RAM BGC GAD 0.413462 0.7
133 GAL GC2 0.410526 0.676923
134 GAL A2G THR 0.410526 0.901961
135 GAL SIA NGA GAL 0.410256 0.884615
136 SIA GAL NGA GAL 0.410256 0.884615
137 NAG NAG FUL BMA MAN MAN NAG GAL 0.409836 0.867925
138 FUC GAL NGA 0.40625 0.918367
139 NAG MAN MAN MAN NAG 0.405941 0.958333
140 NAG A2G GAL 0.402062 0.958333
141 FUC NAG TA5 0.401961 0.671642
142 NAG NAG BMA MAN MAN 0.401869 0.958333
143 GLA GAL GAL 0.4 0.717391
Ligand no: 3; Ligand: NAG GAL FUC; Similar ligands found: 170
No: Ligand ECFP6 Tc MDL keys Tc
1 FUC GAL NDG 1 1
2 GAL NAG FUC 1 1
3 FUL GAL NAG 1 1
4 DR2 1 1
5 FUC GAL NAG 1 1
6 NDG GAL FUC 1 1
7 NAG GAL FUC 1 1
8 NAG FUC 0.809524 0.956522
9 BDZ 0.739726 0.978723
10 FUC GAL NAG FUC 0.739726 0.978723
11 FUC NDG GAL FUC 0.739726 0.978723
12 FUC NAG GAL FUC 0.739726 0.978723
13 BCW 0.739726 0.978723
14 FUC GAL NDG FUC 0.739726 0.978723
15 GAL NDG FUC FUC 0.739726 0.978723
16 GAL NAG FUC FUC 0.739726 0.978723
17 DR3 0.712329 1
18 A2G GAL NAG FUC 0.703704 0.938776
19 FUC GAL NAG A2G 0.703704 0.938776
20 8B7 0.695652 0.73913
21 LAT FUC 0.695652 0.73913
22 BGC GAL FUC 0.695652 0.73913
23 GLC GAL FUC 0.695652 0.73913
24 FUC GAL GLC 0.695652 0.73913
25 NLC 0.671642 0.978261
26 GAL NDG 0.671642 0.978261
27 NDG GAL 0.671642 0.978261
28 FUC GAL NAG GAL BGC 0.62069 1
29 GLC NAG GAL GAL FUC 0.62069 1
30 GAL GLC NAG GAL FUC 0.62069 1
31 FUC GAL NAG GAL FUC 0.619048 0.978723
32 GAL NDG FUC 0.597403 1
33 FUC NDG GAL 0.597403 1
34 NAG GDL 0.597222 0.958333
35 CBS 0.597222 0.958333
36 CBS CBS 0.597222 0.958333
37 NDG NAG 0.597222 0.958333
38 BGC GAL NAG GAL FUC FUC 0.593407 0.978723
39 GLC GAL NAG GAL FUC FUC 0.593407 0.978723
40 GLA GAL NAG 0.592105 0.978261
41 MAN BMA NAG 0.592105 0.978261
42 BMA NAG MAN MAN MAN MAN MAN MAN MAN 0.576087 0.978261
43 A2G GAL BGC FUC 0.568182 1
44 NDG NAG NAG NAG 0.565789 0.938776
45 NAG NAG NDG 0.565789 0.938776
46 NAG NAG NAG NDG 0.565789 0.938776
47 CTO 0.565789 0.938776
48 NDG NAG NAG 0.565789 0.938776
49 NAG NAG NAG NAG NDG 0.565789 0.938776
50 NAG NAG NAG NAG NAG NAG 0.565789 0.938776
51 NDG NAG NAG NDG 0.565789 0.938776
52 NAG NAG NAG NAG NAG NAG NAG NAG 0.565789 0.938776
53 NAG NAG NDG NAG 0.565789 0.938776
54 NAG NAG NAG NAG NAG 0.565789 0.938776
55 XYS GAL FUC 0.551282 0.723404
56 G6S NAG 0.55 0.714286
57 MAN BMA NAG NAG MAN NAG GAL GAL 0.541667 0.938776
58 NAG MAN MAN MAN NAG GAL NAG GAL 0.541667 0.938776
59 NAG GAL NAG 0.536585 0.958333
60 GAL NAG GAL NAG GAL NAG 0.535714 0.938776
61 NAG GAL GAL NAG 0.535714 0.958333
62 FUC GAL NAG NON FUC 0.531915 0.836364
63 GAL BGC NAG GAL 0.53012 0.978261
64 FUC GAL A2G 0.52439 1
65 BGC GLA GAL FUC 0.52439 0.73913
66 A2G GLA FUC 0.52439 1
67 NGA GAL FUC 0.52439 1
68 FUC GLA A2G 0.52439 1
69 A2G GAL FUC 0.52439 1
70 FUC GAL NAG A2G FUC 0.521739 0.938776
71 NAG GAL FUC FUC A2G 0.521739 0.938776
72 NAG BMA NAG MAN MAN NAG NAG 0.520408 0.938776
73 MAG FUC GAL 0.518519 0.958333
74 NAG MAN BMA NDG MAN NAG GAL 0.514852 0.938776
75 NAG NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.514563 0.958333
76 FUC GAL 0.514286 0.717391
77 FUC NAG 0.512821 0.9
78 TCG 0.511905 0.793103
79 NAG NAG BMA MAN MAN NAG GAL NAG 0.509804 0.938776
80 M5G 0.509804 0.958333
81 BGC FUC GAL FUC A2G 0.505495 0.978723
82 GLC FUC GAL FUC A2G 0.505495 0.978723
83 GLA GAL NAG FUC GAL GLC 0.505155 1
84 HS2 0.5 0.86
85 GAL NAG GAL FUC 0.5 1
86 GLA NAG GAL FUC 0.5 1
87 FUC BGC GAL NAG GAL 0.494737 1
88 BHE 0.493827 0.648148
89 FUC BGC GAL 0.493506 0.73913
90 UNU GAL NAG 0.488636 0.9
91 FUC NAG GAL 0.488095 0.92
92 BHG FUC 0.4875 0.648148
93 FUC BHG 0.4875 0.648148
94 4YA 0.4875 0.648148
95 NAG MAN BMA 0.481928 0.978261
96 GAL NAG MAN 0.481928 0.978261
97 GLC GAL NAG GAL FUC A2G 0.480392 0.938776
98 A2G GAL NAG FUC GAL GLC 0.480392 0.938776
99 NAG BMA MAN MAN MAN MAN 0.478723 0.978261
100 FUC BGC GAL NAG 0.478261 1
101 8VZ 0.473684 0.938776
102 SN5 SN5 0.468354 0.823529
103 ASG 0.465753 0.650794
104 NAG NAG BMA MAN MAN 0.463918 0.958333
105 FUC NAG GLA GAL 0.462366 0.978723
106 GAL GAL FUC 0.461538 0.73913
107 GLA GLA FUC 0.461538 0.73913
108 FUC GAL GLA 0.461538 0.73913
109 GLA GAL FUC 0.461538 0.73913
110 FUC GLA GLA 0.461538 0.73913
111 MAN MAN BMA 0.459459 0.717391
112 BMA BMA MAN 0.459459 0.717391
113 EAG RAM RAM GLC RAM NAG RAM RAM GLC RAM 0.459184 0.92
114 GCS GCS NAG 0.455556 0.9
115 GAL A2G 0.454545 0.978261
116 GAL NGA 0.454545 0.978261
117 A2G GAL 0.454545 0.978261
118 NGA GAL BGC 0.452381 0.978261
119 FUC NAG TA5 0.451613 0.671642
120 MAN MAN NAG 0.448276 0.9375
121 GLC GAL NAG GAL 0.444444 0.978261
122 LAT NAG GAL 0.444444 0.978261
123 BEK GAL NAG 0.443299 0.807018
124 NAG MAN MMA 0.44186 0.978723
125 NAG MAN BMA MAN NAG GAL 0.441176 0.958333
126 NAG MAN MAN MAN NAG 0.44086 0.958333
127 G4S MAG FUC 0.44086 0.692308
128 GAL NAG GAL GLC 0.438202 0.978261
129 BGC GAL NAG GAL 0.438202 0.978261
130 FUC NAG T45 0.4375 0.671642
131 BMA MAN MAN MAN 0.435897 0.717391
132 FUC C4W NAG BMA 0.434343 0.884615
133 BGA 0.43299 0.836364
134 KPM 0.431579 0.865385
135 NAG MAN MAN 0.426966 0.978261
136 A2G 0.426471 0.869565
137 NDG 0.426471 0.869565
138 NAG 0.426471 0.869565
139 HSQ 0.426471 0.869565
140 BM3 0.426471 0.869565
141 NGA 0.426471 0.869565
142 4U1 0.424528 0.884615
143 NAG GAL SIA 0.424528 0.867925
144 SGA MAG FUC 0.421053 0.692308
145 FUC C4W NAG BMA MAN NAG 0.419643 0.884615
146 GAL NGA GLA BGC GAL 0.419355 0.978261
147 FUC C4W NAG BMA MAN MAN NAG NAG 0.418803 0.884615
148 GAL MGC 0.417722 0.978723
149 NAG GAL GAL NAG GAL 0.417582 0.958333
150 NAG GAL BGC 0.41573 0.978261
151 A2G MBG 0.414634 0.978723
152 MAN MAN MAN GLC 0.414634 0.717391
153 MBG A2G 0.414634 0.978723
154 NAG NAG FUL BMA MAN MAN NAG GAL 0.413793 0.867925
155 NAG GCU NAG GCD 0.411215 0.851852
156 GAL NAG GAL 0.411111 0.9375
157 NGA GLA GAL BGC 0.408602 0.978261
158 NAG AMU 0.406593 0.92
159 NAG NAG BMA 0.406593 0.884615
160 NAG MUB 0.406593 0.92
161 NAG NDG BMA 0.406593 0.884615
162 GLA MBG 0.402778 0.723404
163 NAG BMA 0.402439 0.88
164 NAG A2G 0.402439 0.958333
165 NAG NGA 0.402439 0.958333
166 BMA MAN MAN MAN MAN 0.402299 0.717391
167 MMA MAN NAG MAN NAG NAG 0.402062 0.92
168 NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.401869 0.9
169 GAL NAG GAL BGC 0.4 0.9375
170 4U2 0.4 0.901961
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3ZW2; Ligand: GLA NAG GAL FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 3zw2.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 3ZW2; Ligand: NAG GAL FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3zw2.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 3ZW2; Ligand: GAL FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 3zw2.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 3ZW2; Ligand: NAG GAL FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 3zw2.bio1) has 16 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 3ZW2; Ligand: NAG GAL FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 3zw2.bio1) has 16 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 3ZW2; Ligand: NAG GAL FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 3zw2.bio1) has 16 residues
No: Leader PDB Ligand Sequence Similarity
APoc FAQ
Feedback