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Receptor
PDB id Resolution Class Description Source Keywords
3ZQ6 2.11 Å EC: 3.6.3.16 ADP-ALF4 COMPLEX OF M. THERM. TRC40 METHANOTHERMOBACTER THERMAUTOTROPHICUSORGANISM_TAXID: 145262 TAIL-ANCHORED MEMBRANE PROTEIN TARGETING FACTOR ATP-BINDINNUCLEOTIDE-BINDING HYDROLASE
Ref.: A CONSERVED ARCHAEAL PATHWAY FOR TAIL-ANCHORED MEMB PROTEIN INSERTION. TRAFFIC V. 12 1119 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ADP ALF A:401;
B:401;
C:401;
D:401;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
527.153 n/a P(=O)...
K A:404;
B:404;
C:404;
D:404;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
39.098 K [K+]
MG A:403;
B:403;
C:403;
D:403;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
ZN A:1323;
D:1322;
Part of Protein;
Part of Protein;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3ZQ6 2.11 Å EC: 3.6.3.16 ADP-ALF4 COMPLEX OF M. THERM. TRC40 METHANOTHERMOBACTER THERMAUTOTROPHICUSORGANISM_TAXID: 145262 TAIL-ANCHORED MEMBRANE PROTEIN TARGETING FACTOR ATP-BINDINNUCLEOTIDE-BINDING HYDROLASE
Ref.: A CONSERVED ARCHAEAL PATHWAY FOR TAIL-ANCHORED MEMB PROTEIN INSERTION. TRAFFIC V. 12 1119 2011
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 3ZQ6 - ADP ALF n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 3ZQ6 - ADP ALF n/a n/a
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 2WOJ - ADP ALF n/a n/a
2 3ZQ6 - ADP ALF n/a n/a
3 3IO3 - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ADP ALF; Similar ligands found: 307
No: Ligand ECFP6 Tc MDL keys Tc
1 ALF ADP 1 1
2 ADP ALF 1 1
3 ADP PO3 0.8 0.918919
4 ADP VO4 0.752941 0.907895
5 VO4 ADP 0.752941 0.907895
6 AF3 ADP 3PG 0.707071 0.961039
7 ADP BMA 0.703297 0.871795
8 GAP 0.697674 0.871795
9 AMP 0.683544 0.868421
10 A 0.683544 0.868421
11 A2D 0.679012 0.87013
12 ADP 0.674699 0.87013
13 ATP A A A 0.666667 0.906667
14 BA3 0.662651 0.87013
15 ABM 0.658537 0.846154
16 B4P 0.654762 0.87013
17 AP5 0.654762 0.87013
18 AT4 0.647059 0.8375
19 AN2 0.647059 0.858974
20 AP2 0.642857 0.8375
21 A12 0.642857 0.8375
22 DAL AMP 0.641304 0.883117
23 AR6 AR6 0.64 0.894737
24 M33 0.639535 0.858974
25 SRA 0.634146 0.825
26 HEJ 0.632184 0.87013
27 ACP 0.632184 0.848101
28 ATP 0.632184 0.87013
29 AHZ 0.627451 0.8
30 AQP 0.625 0.87013
31 APC 0.625 0.8375
32 APR 0.625 0.87013
33 5FA 0.625 0.87013
34 AR6 0.625 0.87013
35 ADX 0.62069 0.788235
36 CA0 0.62069 0.848101
37 AU1 0.62069 0.848101
38 AGS 0.617977 0.82716
39 AD9 0.617977 0.871795
40 SAP 0.617977 0.82716
41 50T 0.613636 0.858974
42 MYR AMP 0.612245 0.8
43 ATF 0.608696 0.909091
44 A A 0.608247 0.87013
45 PRX 0.606742 0.825
46 ANP 0.604396 0.848101
47 TAT 0.604396 0.8375
48 T99 0.604396 0.8375
49 ACQ 0.604396 0.848101
50 ADV 0.6 0.8375
51 RBY 0.6 0.8375
52 AMP DBH 0.588235 0.848101
53 4TA 0.585586 0.790698
54 6YZ 0.585106 0.848101
55 LMS 0.583333 0.767442
56 5AL 0.580645 0.858974
57 A1R 0.57732 0.817073
58 SON 0.573034 0.8375
59 MAP 0.572917 0.85
60 A22 0.572917 0.858974
61 TYR AMP 0.572816 0.85
62 AMP NAD 0.571429 0.883117
63 AOC 0.569767 0.779221
64 SRP 0.568421 0.8375
65 5SV 0.56701 0.785714
66 PO4 PO4 A A A A PO4 0.565657 0.88
67 ALF GDP 0.565657 0.9125
68 GDP ALF 0.565657 0.9125
69 9X8 0.565657 0.82716
70 ARG AMP 0.561905 0.790698
71 ADQ 0.561224 0.848101
72 A3R 0.561224 0.817073
73 NAJ PZO 0.556522 0.829268
74 Z5A 0.554622 0.764045
75 BIS 0.554455 0.886076
76 ADN 0.551282 0.776316
77 RAB 0.551282 0.776316
78 XYA 0.551282 0.776316
79 OOB 0.55102 0.858974
80 25A 0.55102 0.87013
81 8QN 0.55102 0.858974
82 9ZD 0.55102 0.817073
83 9ZA 0.55102 0.817073
84 OAD 0.55 0.848101
85 AFH 0.54717 0.864198
86 LPA AMP 0.546296 0.8
87 PAJ 0.545455 0.797619
88 AMO 0.545455 0.8375
89 4AD 0.545455 0.85
90 5AS 0.544444 0.725275
91 NAD 0.54386 0.883117
92 9SN 0.543689 0.875
93 00A 0.54 0.8625
94 AHX 0.54 0.807229
95 DLL 0.54 0.858974
96 3OD 0.539216 0.848101
97 1ZZ 0.539216 0.77907
98 TXA 0.539216 0.8375
99 JB6 0.539216 0.817073
100 NAJ PYZ 0.537815 0.833333
101 5N5 0.5375 0.753247
102 3UK 0.534653 0.848101
103 A3D 0.534483 0.871795
104 25L 0.533981 0.858974
105 5CD 0.530864 0.786667
106 A4D 0.530864 0.753247
107 LAD 0.529412 0.797619
108 NAE 0.529412 0.85
109 PR8 0.529412 0.788235
110 WAQ 0.529412 0.817073
111 B5V 0.529412 0.8375
112 FYA 0.524272 0.835443
113 ME8 0.524272 0.77907
114 PTJ 0.524272 0.807229
115 NB8 0.524272 0.807229
116 NAQ 0.512397 0.829268
117 EP4 0.511905 0.716049
118 G5A 0.510417 0.725275
119 B5Y 0.509434 0.82716
120 B5M 0.509434 0.82716
121 YAP 0.509434 0.82716
122 FA5 0.509434 0.8375
123 G3A 0.509259 0.807229
124 ZID 0.508197 0.871795
125 DTA 0.505882 0.746835
126 M2T 0.505882 0.719512
127 3DH 0.505747 0.734177
128 XAH 0.504673 0.77907
129 GA7 0.504587 0.814815
130 G5P 0.504587 0.807229
131 G A A A 0.504274 0.829268
132 DQV 0.5 0.858974
133 GTA 0.5 0.8
134 MTA 0.5 0.734177
135 A3P 0.5 0.868421
136 4UV 0.5 0.82716
137 DND 0.5 0.860759
138 PAP 0.5 0.857143
139 NAI 0.5 0.817073
140 NXX 0.5 0.860759
141 OMR 0.495575 0.770115
142 TXE 0.495575 0.817073
143 TSB 0.49505 0.741573
144 A5A 0.494949 0.75
145 7D5 0.494253 0.7875
146 U A 0.491667 0.839506
147 A G 0.491525 0.839506
148 AP0 0.491228 0.807229
149 48N 0.491071 0.807229
150 7MD 0.490909 0.77907
151 4UU 0.490909 0.82716
152 SSA 0.49 0.725275
153 2A5 0.489583 0.802469
154 7D3 0.48913 0.790123
155 6RE 0.488889 0.722892
156 U A G G 0.487395 0.839506
157 UP5 0.486726 0.82716
158 NAX 0.486726 0.788235
159 TXD 0.486726 0.817073
160 6V0 0.486726 0.807229
161 TAD 0.486486 0.797619
162 54H 0.485149 0.733333
163 52H 0.485149 0.725275
164 VMS 0.485149 0.733333
165 ATR 0.484536 0.844156
166 NDE 0.484375 0.860759
167 A2P 0.483871 0.855263
168 3AM 0.483146 0.831169
169 TYM 0.482456 0.8375
170 LAQ 0.482143 0.77907
171 9K8 0.481132 0.758242
172 5CA 0.480392 0.725275
173 8X1 0.480392 0.702128
174 53H 0.480392 0.725275
175 N01 0.479339 0.883117
176 NMN AMP PO4 0.478992 0.85
177 139 0.478632 0.788235
178 T5A 0.478632 0.761364
179 4TC 0.478261 0.807229
180 J7C 0.478261 0.710843
181 A3N 0.478261 0.725
182 YLP 0.477876 0.761364
183 ZAS 0.477778 0.75
184 NDC 0.476923 0.829268
185 A A A 0.47619 0.883117
186 ALF 5GP 0.475248 0.9125
187 A4P 0.474138 0.744444
188 4UW 0.473684 0.797619
189 GJV 0.473118 0.714286
190 S4M 0.473118 0.655556
191 GSU 0.471698 0.725275
192 ENQ 0.471698 0.868421
193 P5A 0.471698 0.694737
194 DSZ 0.471154 0.725275
195 LSS 0.471154 0.709677
196 NSS 0.471154 0.744444
197 F2R 0.470588 0.761364
198 7D4 0.46875 0.790123
199 MAO 0.468085 0.704545
200 DSH 0.467391 0.690476
201 COD 0.466667 0.736264
202 NVA LMS 0.466667 0.72043
203 ADJ 0.466102 0.770115
204 UPA 0.465517 0.817073
205 YLB 0.465517 0.761364
206 YLC 0.465517 0.77907
207 7MC 0.465517 0.761364
208 5X8 0.463918 0.725
209 IMO 0.462366 0.831169
210 LEU LMS 0.462264 0.72043
211 CNA 0.462185 0.860759
212 A U 0.461538 0.85
213 V3L 0.46 0.87013
214 KAA 0.457944 0.702128
215 IOT 0.457627 0.752809
216 A2R 0.456311 0.858974
217 2AM 0.455556 0.820513
218 PPS 0.455446 0.767442
219 8PZ 0.454545 0.725275
220 CNV FAD 0.453901 0.764045
221 YLA 0.453782 0.761364
222 ITT 0.453608 0.820513
223 5AD 0.451219 0.706667
224 AV2 0.45098 0.822785
225 FAD NBT 0.450704 0.701031
226 YSA 0.45045 0.725275
227 SAH 0.45 0.707317
228 HFD 0.45 0.897436
229 AYB 0.45 0.752809
230 SFG 0.44898 0.7125
231 GDP AF3 0.448598 0.9125
232 FAD CNX 0.448276 0.68
233 M24 0.448 0.853659
234 4YB 0.447368 0.709677
235 80F 0.447154 0.761364
236 Y3J 0.447059 0.756757
237 7D7 0.445783 0.705128
238 SAM 0.445545 0.678161
239 PAX 0.445312 0.770115
240 P33 FDA 0.445205 0.715789
241 P6G FDA 0.445205 0.73913
242 A7D 0.443299 0.7375
243 BTX 0.442623 0.761364
244 6AD 0.441176 0.797619
245 OVE 0.44086 0.790123
246 SA8 0.44 0.674419
247 BT5 0.439024 0.752809
248 DZD 0.439024 0.797619
249 MHZ 0.438776 0.648352
250 71V 0.4375 0.795181
251 A3G 0.43617 0.7375
252 6C6 0.435644 0.792683
253 SAI 0.435644 0.719512
254 DAT 0.434343 0.790123
255 SMM 0.432692 0.674157
256 WSA 0.432203 0.733333
257 A C A C 0.432 0.829268
258 7C5 0.429825 0.756098
259 EEM 0.427184 0.697674
260 AAT 0.427184 0.674419
261 NAP 0.426357 0.871795
262 NAJ 0.42623 0.883117
263 A5D 0.425743 0.746835
264 YLY 0.425197 0.752809
265 PGS 0.424242 0.795181
266 TAP 0.423077 0.839506
267 NA7 0.422018 0.8375
268 D5M 0.421053 0.7875
269 DA 0.421053 0.7875
270 NEC 0.421053 0.6875
271 U A C C 0.420635 0.839506
272 GEK 0.420561 0.722892
273 AVV 0.420561 0.875
274 649 0.420168 0.694737
275 NA0 0.419847 0.860759
276 EAD 0.419847 0.788235
277 NHD 0.419355 0.858974
278 NIA 0.419355 0.761905
279 S7M 0.419048 0.678161
280 P1H 0.41791 0.770115
281 6IA 0.417476 0.755814
282 3AT 0.417476 0.846154
283 DTP 0.417476 0.790123
284 FAD NBA 0.415584 0.68
285 N0B 0.415385 0.761364
286 A3S 0.414141 0.746835
287 C2R 0.413043 0.7875
288 AMZ 0.413043 0.797468
289 ARU 0.412844 0.797619
290 NFD 0.412698 0.910256
291 GGZ 0.411215 0.744186
292 101 0.410526 0.7875
293 2SA 0.409524 0.814815
294 K15 0.409091 0.651685
295 U A A U 0.409091 0.839506
296 A6D 0.409091 0.709302
297 6K6 0.407407 0.833333
298 A3T 0.405941 0.75641
299 8Q2 0.404959 0.702128
300 AIR 0.404494 0.805195
301 0UM 0.40367 0.666667
302 6FA 0.402878 0.761364
303 AAM 0.402062 0.868421
304 FB0 0.40146 0.712766
305 7DD 0.4 0.857143
306 ACK 0.4 0.792208
307 62X 0.4 0.637363
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3ZQ6; Ligand: ADP ALF; Similar sites found with APoc: 705
This union binding pocket(no: 1) in the query (biounit: 3zq6.bio2) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 1D5C GDP None
2 3KC1 2T6 1.23457
3 5CK5 GDP 1.26582
4 1DAK ADP 1.33929
5 1DAK DPU 1.33929
6 1R0X ATP 1.3986
7 4PPF FLC 1.54321
8 4UP4 GAL NAG 1.54321
9 4TQK NAG 1.54321
10 4UP4 NDG 1.54321
11 4UP4 NAG 1.54321
12 1X9I G6Q 1.65563
13 4RD0 GDP 1.85185
14 4IDN GNP 1.85185
15 2FNA ADP 1.85185
16 4PTN PYR 1.85185
17 5HVJ ANP 1.90476
18 5XKT GNP 2
19 2QEN ADP 2
20 4LPS GDP 2.06612
21 3BOS CDP 2.06612
22 3LRE ADP 2.16049
23 5M04 GDP 2.16049
24 2NCD ADP 2.16049
25 2OM2 GDP 2.16049
26 1Y3A GDP 2.16049
27 1SVK ALF GDP 2.16049
28 4LJ9 ACP 2.16049
29 2O0J ADP 2.16049
30 1O9U ADZ 2.16049
31 4WEI GLC GAL 2.16606
32 6HKE LMR 2.20126
33 6HKE MLT 2.20126
34 1BH2 GSP 2.22222
35 4FCW ADP 2.2508
36 3CNL GNP 2.29008
37 2XOC ADP 2.29885
38 1S3G AP5 2.30415
39 4X8O AP5 2.33645
40 1M7G AV2 2.36967
41 1M7G ADX 2.36967
42 3BER AMP 2.40964
43 3IP8 B85 2.41935
44 1BG2 ADP 2.46154
45 3U6B GDP 2.46914
46 2HCJ GDP 2.46914
47 5JBQ GDP 2.46914
48 2BVN GNP 2.46914
49 4G5G GDP 2.46914
50 1D8T GDP 2.46914
51 3DC4 ADP 2.46914
52 3U6K GDP 2.46914
53 5ZXD ATP 2.46914
54 2ZFI ADP 2.46914
55 2D2F ADP 2.46914
56 4PC3 GDP 2.46914
57 2ZR9 DTP 2.46914
58 1OYY AGS 2.46914
59 1ZCB GDP 2.46914
60 1FNN ADP 2.46914
61 1QHG ATP 2.46914
62 1G7S GDP 2.46914
63 5AK0 8V1 2.46914
64 3ITJ CIT 2.46914
65 5VHC BEF ADP 2.46914
66 3QDK QDK 2.46914
67 5BOE PEP 2.46914
68 2JK0 ASP 2.46914
69 4Z7X 3CX 2.52101
70 1D2N ANP 2.57353
71 4QOS ADP 2.64151
72 1WF3 GNP 2.65781
73 1B0U ATP 2.67176
74 2QZ4 ADP 2.67176
75 3GJ0 GDP 2.71493
76 3GJ3 GDP 2.71493
77 3GJ4 GDP 2.71493
78 3P7G MAN 2.73973
79 1NRJ GTP 2.75229
80 4NU0 AP5 2.76498
81 3W5J GDP 2.77778
82 2AWN ADP 2.77778
83 2VVG ADP 2.77778
84 2RCN GDP 2.77778
85 2WHX ADP 2.77778
86 2C77 GNP 2.77778
87 1G41 ADP 2.77778
88 4YJ1 ADP 2.77778
89 2C78 GNP 2.77778
90 2JLR ANP 2.77778
91 1K6M AGS 2.77778
92 3RC3 ANP 2.77778
93 6AIC AMP 2.80374
94 3ZFD ANP 2.849
95 1JJV ATP 2.91262
96 4QM7 GTP 2.92398
97 2FFQ GSP 2.92398
98 1YZQ GNP 2.94118
99 1R2Q GNP 2.94118
100 1YQC GLV 2.94118
101 2VWT PYR 2.99625
102 1LVG ADP 3.0303
103 1M3U KPL 3.0303
104 3GJ7 GDP 3.06122
105 3WYA GDP 3.08642
106 5W75 GDP 3.08642
107 1OXV ANP 3.08642
108 1V8K ANP 3.08642
109 2OG2 MLI 3.08642
110 1WDT GTP 3.08642
111 5MZN ADP 3.08642
112 5ZBR ANP 3.08642
113 4H1V GNP 3.08642
114 6AU6 GDP 3.08642
115 3PCR GTP 3.08642
116 1IWE IMP 3.08642
117 5MVR ADP 3.08642
118 1JOT GAL A2G 3.08642
119 2F5X ASP 3.20513
120 4Q1A 2XZ 3.21429
121 4Q1A UDP 3.21429
122 2ZEJ GDP 3.26087
123 4M6T SAM 3.27869
124 1KY3 GDP 3.2967
125 3WYG GTP 3.2967
126 4KFU ACP 3.30189
127 3B9Q MLI 3.31126
128 1FZQ GDP 3.31492
129 1RRC ADP 3.32226
130 4R2I ANP 3.33333
131 2Y8E GNP 3.35196
132 4IF4 BEF 3.36538
133 5U32 GDP 3.39506
134 4DCT GDP 3.39506
135 2DPY ADP 3.39506
136 4R43 GDP 3.39506
137 4TMZ GSP 3.39506
138 4NCN GTP 3.39506
139 1XKV ATP 3.39506
140 5VGR GDP 3.39506
141 3VMF GTP 3.39506
142 1W5T ADP 3.39506
143 1W5T ANP 3.39506
144 2D3N GLC GLC GLC 3.39506
145 1P9B GDP 3.39506
146 4TL6 ANP 3.39506
147 5IRN ADP 3.39506
148 6B8B ADP 3.39506
149 2J0W ASP 3.39506
150 1NST A3P 3.39506
151 1W7J ADP BEF 3.39506
152 3TBK ANP 3.42342
153 3NKV GNP 3.42857
154 3CX8 GSP 3.44828
155 5G6U YJM 3.44828
156 5FQ0 FLC 3.50877
157 4V0K GDP 3.5503
158 1Z83 AP5 3.57143
159 4B47 GDP 3.58127
160 2QTV GNP 3.59281
161 3Q72 GNP 3.61446
162 3LL5 ATP 3.61446
163 3FVQ ATP 3.62117
164 1XX6 ADP 3.66492
165 4MKG AP5 3.68664
166 3Q85 GNP 3.7037
167 3N5C GDP 3.7037
168 5WLB GNP 3.7037
169 2X77 GDP 3.7037
170 1IN4 ADP 3.7037
171 6DEF GCP 3.7037
172 1R6B ADP 3.7037
173 5UQW GDP 3.7037
174 1NY5 ADP 3.7037
175 3SBD GNP 3.7037
176 5Z69 AGS 3.7037
177 2GJP MAL 3.7037
178 4NE2 SH2 3.7037
179 4NE2 ADP 3.7037
180 4QDI ATP 3.7037
181 1UKZ ADP 3.7037
182 1KGZ PRP 3.7037
183 1OS1 ATP 3.7037
184 1OS1 PYR 3.7037
185 1ZD9 GDP 3.7234
186 6G14 G4P 3.7415
187 4AKB GAL 3.7594
188 2J0V GDP 3.77358
189 4XGU ADP 3.77358
190 1YZN GNP 3.78378
191 5UPK GNP 3.78378
192 5H4S RAM 3.87324
193 2RGX AP5 3.8835
194 1SQ5 ADP 3.8961
195 3B7G ANP 3.91304
196 5XC5 GTP 3.97727
197 2GCO GNP 3.9801
198 2GCN GDP 3.9801
199 1YZG GDP 4.01235
200 4J0Q GDP 4.01235
201 2IS6 ADP 4.01235
202 4IHQ ADP 4.01235
203 2BCG GDP 4.01235
204 2XTZ GSP 4.01235
205 1YTM ATP 4.01235
206 1M2O GNP 4.01235
207 2J5V PCA 4.01235
208 3QKT ANP 4.01235
209 4ZNL BEF ADP 4.0146
210 5G41 AP5 4.03587
211 3EWA ANP 4.03727
212 3FYH ADP 4.03727
213 3T1O GDP 4.0404
214 5O74 GDP 4.06091
215 1H65 GDP 4.07407
216 5WDR GNP 4.09357
217 1Z08 GNP 4.11765
218 3RAB GNP 4.14201
219 2A5F GTP 4.14508
220 4DKX GDP 4.16667
221 5E95 GDP 4.16667
222 3FB4 AP5 4.16667
223 5DI3 GNP 4.18251
224 4TTQ ATP 4.18605
225 5KSP GDP 4.21053
226 3KUD GDP 4.21687
227 2X7I CIT 4.22078
228 5VLQ ANP 4.24448
229 5O2T GSP 4.27807
230 4HAT GNP 4.28571
231 2BME GNP 4.30108
232 5GOE GDP 4.32099
233 2XT3 ADP 4.32099
234 4AG5 ADP 4.32099
235 1WQ1 AF3 4.32099
236 2PL3 ADP 4.32099
237 1TAD GDP 4.32099
238 1TAD ALF 4.32099
239 1WQ1 GDP 4.32099
240 5KSZ GCP 4.32099
241 1Z6T ADP 4.32099
242 5Y6N ADP 4.32099
243 3SFV GDP 4.32099
244 5NM7 GLY 4.32099
245 4ZDJ UTP 4.32099
246 5IM3 DTP 4.32099
247 4D0N GDP 4.32432
248 6BCA GSP 4.32432
249 5HPY GDP 4.32432
250 6BC0 GSP 4.32432
251 4KAX GTP 4.34783
252 3DZD ADP 4.34783
253 1KMQ GNP 4.34783
254 4PYA 2X3 4.34783
255 4GNC ASO 4.34783
256 4P3Y GDP 4.3956
257 2WIC GNP 4.49438
258 2QG6 NMN 4.52261
259 3JZ0 CLY 4.52962
260 3M1I GTP 4.56621
261 4GOJ GNP 4.58333
262 1LFD GNP 4.5977
263 1KSH GDP 4.60526
264 3BY9 SIN 4.61538
265 3WYF GTP 4.62185
266 2HT6 GDP 4.62963
267 3AQ4 GDP 4.62963
268 5FG3 GDP 4.62963
269 1F6B GDP 4.62963
270 1G6O ADP 4.62963
271 3KTA AP5 4.62963
272 2FAH GDP 4.62963
273 2ZPA ADP 4.62963
274 2V2V V12 4.62963
275 5U75 SIA GAL NDG FUC 4.7619
276 5JCP GDP ALF 4.77327
277 6H5E ANP 4.78088
278 4R98 GNH 4.79705
279 1ZJ6 G3D 4.81283
280 4M9Q GNP 4.84582
281 1RE0 GDP 4.87805
282 3DDC GNP 4.90798
283 2GDJ ANP 4.92424
284 1S9D GDP 4.92611
285 5H7K GDP 4.93827
286 5H7J GCP 4.93827
287 3EC1 GDP 4.93827
288 5WC2 ADP 4.93827
289 2HF9 GSP 4.93827
290 2ZTS ADP 4.93827
291 4XOI GTP 4.93827
292 2B8W ALF 5GP 4.93827
293 5I34 GDP 4.93827
294 3QXC ATP 4.93827
295 4BFW ZVW 4.93827
296 2BO4 FLC 4.93827
297 2Z5F A3P 5.03356
298 5ZB0 TYD 5.05051
299 5ZB0 ADP 5.05051
300 3BC1 GNP 5.08475
301 4BQS K2Q 5.11364
302 4BQS ADP 5.11364
303 2ZX2 RAM 5.12821
304 5IRR GSP 5.19481
305 4QRH 0O2 5.2381
306 3TKL GTP 5.24345
307 4WZ6 ATP 5.24691
308 1SKQ GDP 5.24691
309 2PZE ATP 5.24691
310 1HTW ADP 5.24691
311 5FTB ANP 5.24691
312 1W0J ADP BEF 5.24691
313 1W0J ADP 5.24691
314 1LVK MNT BEF 5.24691
315 1QF9 ALF 5.24691
316 1QF9 C5P 5.24691
317 1QF9 ADP 5.24691
318 5FHD ADP ALF 5.24691
319 2Q2Y MKR 5.24691
320 2Q2Y ADP 5.24691
321 4IOK ADP 5.24691
322 4IOK XPO 5.24691
323 6BS6 GLC GLC GLC 5.24691
324 4ZI2 GNP 5.26316
325 1Z06 GNP 5.29101
326 1G7C 5GP 5.31915
327 4WOP CTP 5.33333
328 1GWN GTP 5.36585
329 1QHH ATP 5.38922
330 1YQT ADP 5.39033
331 5YV5 ADP 5.41045
332 4PX9 ADP 5.47945
333 1SQL GUN 5.47945
334 4MKF AP5 5.52995
335 1MKY GDP 5.55556
336 3IIJ ADP 5.55556
337 1XMV ADP 5.55556
338 3REF GDP 5.55556
339 2ZJ5 ADP 5.55556
340 6FAA ADP 5.55556
341 2QK4 ATP 5.55556
342 1UJ2 C5P 5.55556
343 1UJ2 ADP 5.55556
344 3E5H GNP 5.61798
345 2IYL GDP 5.6338
346 3PQC GDP 5.64103
347 1KO8 6PG 5.71429
348 5UIV ADP 5.72687
349 2A5J GDP 5.75916
350 3CH5 GDP 5.76923
351 1VG0 GDP 5.7971
352 1VG8 GNP 5.7971
353 1CXZ GSP 5.81395
354 2WJG GDP 5.85106
355 6B4K ANP 5.8642
356 3T34 GDP 5.8642
357 2I4I AMP 5.8642
358 2BIF SIN 5.8642
359 2BIF ANP 5.8642
360 2KIN ADP 5.88235
361 3R7F CP 5.92105
362 5TB5 GDP 5.94595
363 5TAR GDP 5.94595
364 1M7B GTP 5.97826
365 1NN5 ANP 6.04651
366 1NN5 2DT 6.04651
367 3DOE GTP 6.06061
368 3BFV ADP 6.17284
369 4JLV ADP 6.17284
370 1B7T ADP 6.17284
371 4OHY ANP 6.17284
372 6CS8 F9Y 6.17284
373 3TTM PUT 6.17284
374 4K81 GTP 6.20155
375 5UWH GNP 6.29371
376 5UWT GNP 6.29371
377 5UWR GNP 6.29371
378 5UWQ GNP 6.29371
379 5UWI GNP 6.29371
380 5DIF GNP 6.29371
381 5UWJ GNP 6.29371
382 5DHF GNP 6.29371
383 5UWW GNP 6.29371
384 5DI9 GNP 6.29371
385 4HSE ADP 6.29723
386 5BXQ GDP 6.29921
387 1Z0A GDP 6.32184
388 2WKQ GTP 6.3253
389 4GOX A3P 6.38978
390 1KK8 BEF ADP 6.47482
391 1FP6 ADP 6.48148
392 1KK1 GNP 6.48148
393 5TSH ANP 6.48148
394 5TSH ADP 6.48148
395 2G77 GDP 6.48148
396 2CE7 ADP 6.48148
397 3TNF GNP 6.48148
398 1IBR GNP 6.48148
399 2C9O ADP 6.48148
400 2G77 AF3 6.48148
401 2FH5 GTP 6.48649
402 4HI0 GDP 6.53266
403 1OW3 GDP 6.61157
404 3T12 GDP ALF 6.61765
405 2WJH FLC 6.62651
406 2WJH GDP 6.62651
407 1T5C ADP 6.79012
408 1F5N GNP 6.79012
409 4CVN ADP 6.80628
410 1L2T ATP 6.80851
411 2C5L GTP 6.83761
412 4XSH GSP 6.84932
413 1CBK ROI 6.875
414 5BQ5 ADP BEF 6.87831
415 3A4M ADP 6.92308
416 3DKP ADP 6.93878
417 2CDN ADP 6.96517
418 3HAV ATP 7.02341
419 2P3V SRT 7.03125
420 4BAS GNP 7.03518
421 1CS4 GSP 7.07547
422 4V03 ADP 7.09877
423 3EZ2 ADP 7.09877
424 3MD0 GDP 7.09877
425 4LYA ATP 7.09877
426 5I0H ADP BEF 7.09877
427 3RLF ANP 7.09877
428 4IEE AGS 7.09877
429 5XDR ADP 7.09877
430 3TK1 GDP 7.09877
431 1U0J ADP 7.11611
432 1SVI GDP 7.17949
433 3T5G GDP 7.18232
434 3DEF GDP 7.25191
435 6BSX GDP 7.30337
436 6BSX E7S 7.30337
437 1A4R GNH 7.32984
438 1A4R GDP 7.32984
439 4ITR GDP 7.32984
440 2NGR GDP 7.32984
441 2WMO GTP 7.36842
442 3Q9L ATP 7.40741
443 3VX3 ADP 7.40741
444 4FRZ ADP 7.40741
445 2OBM ADP 7.40741
446 3B5J 12D 7.40741
447 2GKS ADP 7.40741
448 5BN3 ADP 7.40741
449 1DAR GDP 7.40741
450 5EP2 AZU 7.40741
451 2Z49 AMG 7.40741
452 5IRC GDP 7.46269
453 1FQJ GDP 7.48299
454 1FQK GDP 7.48299
455 1FQJ ALF 7.48299
456 1FQK ALF 7.48299
457 1TU3 GNP 7.59494
458 5W7Q GDP 7.71605
459 1F9V ADP 7.71605
460 2GK6 ADP 7.71605
461 4P4T GDP 7.71605
462 4WZA ADP 7.71605
463 4WZA ACP 7.71605
464 3AB3 GDP 7.72358
465 2EFE GNH 7.73481
466 1Z2A GDP 7.7381
467 3QVV A3P 7.79661
468 2ODE ALF GDP 7.80142
469 1GRN GDP 7.88177
470 4YDS ATP 7.89474
471 2CHG ANP 7.9646
472 2V7Q ATP 8
473 2CK3 ANP 8
474 2CK3 ADP 8
475 2V7Q ADP 8
476 5W76 GDP 8.02469
477 3P4X ADP 8.02469
478 4ZKD GDP 8.02469
479 1SVM ATP 8.02469
480 6GR0 F8W 8.04598
481 1TX4 ALF GDP 8.08081
482 6FA4 GNP 8.09249
483 5GVR LMR 8.11966
484 4LC1 GDP 8.33333
485 1JI0 ATP 8.33333
486 3LXR GDP 8.33333
487 1ZUI SKM 8.33333
488 1D2E GDP 8.33333
489 3EF0 ALF 8.33333
490 2GWH A3P 8.38926
491 2CBZ ATP 8.43882
492 2XTN GTP 8.54701
493 3L6C MLI 8.55457
494 1UAD GNP 8.57143
495 4LHW GNP 8.62069
496 5L3R GCP 8.63787
497 5L3V GDP 8.64198
498 5N69 ADP 8.64198
499 4ZG4 VO4 ADP 8.64198
500 1X6V ADP 8.64198
501 1LNX URI 8.64198
502 2UZI GTP 8.65385
503 2GJ8 ALF GDP 8.72093
504 1F2U ATP 8.72483
505 1GXU 2HP 8.79121
506 1EK0 GNP 8.82353
507 1G16 GDP 8.82353
508 5EXT ADP 8.84615
509 1YVD GNP 8.87574
510 3A1S GDP 8.91473
511 1U8Z GDP 8.92857
512 1GOJ ADP 8.95062
513 3CPJ GDP 8.96861
514 1KAO GDP 8.98204
515 4U00 ADP 9.01639
516 1ZIN AP5 9.21659
517 1PUJ GNP 9.21986
518 3ZIA ADP 9.25926
519 3ZIA ATP 9.25926
520 1WA5 GTP 9.25926
521 4A4Z ANP 9.25926
522 3WY9 GDP 9.375
523 1AQU A3P 9.42761
524 1Z0F GDP 9.49721
525 3COB ADP 9.5679
526 3NHB ADP 9.5679
527 3E70 GDP 9.5679
528 1TQ4 GDP 9.5679
529 5H68 AGS 9.5679
530 2VDJ HSE 9.5679
531 4D0G GTP 9.71429
532 3GJ8 GDP 9.78261
533 4YC7 GNP 9.87654
534 2XAU ADP 9.87654
535 2CJW GDP 9.89583
536 3UIE ANP 10
537 2F9L GDP 10.0503
538 1NF3 GNP 10.1562
539 2W58 ADP 10.1852
540 1QF5 RPL 10.1852
541 1QF5 GDP 10.1852
542 1CLU DBG 10.241
543 43CA NPO 10.2564
544 1NJF ADP 10.4
545 1NJF AGS 10.4
546 5L3W GDP 10.4575
547 1OIX GDP 10.4712
548 1OIV GDP 10.4712
549 6BVL GNP 10.4938
550 1NVV GNP 10.4938
551 6BVJ GNP 10.4938
552 6D59 GNP 10.4938
553 6D56 GNP 10.4938
554 6BVI GNP 10.4938
555 6D5H GNP 10.4938
556 6D5L GNP 10.4938
557 6BVM GNP 10.4938
558 6D5J GNP 10.4938
559 6BVK GNP 10.4938
560 6D5E GNP 10.4938
561 6D55 GNP 10.4938
562 6D5G GNP 10.4938
563 6D5V GNP 10.4938
564 6D5M GNP 10.4938
565 1XP8 AGS 10.4938
566 4HDO GNP 10.7784
567 1GUA GNP 10.7784
568 3X1Z GNP 10.7784
569 5LTJ BEF 10.8025
570 5LTJ ADP 10.8025
571 5L3S GNP 10.8108
572 3RWO GDP 10.8108
573 3BFX A3P 10.8108
574 1AKY AP5 10.9091
575 1JJ7 ADP 11.1111
576 5KUT GDP 11.1111
577 5JCZ GDP 11.1732
578 1X1R GDP 11.236
579 4LX0 BEF GDP 11.2994
580 4D81 ADP 11.3074
581 4PJ3 ANP 11.4198
582 5X40 ACP 11.4198
583 3KLL MAL 11.4198
584 3QBT GNP 11.4286
585 1DS6 GDP 11.4583
586 1I4D GDP 11.4583
587 4C4P GNP 11.5607
588 4E03 ADP 11.6505
589 2IL4 COA 11.6505
590 1MH1 GNP 11.828
591 1VG1 GDP 11.8919
592 1VG9 GDP 11.8919
593 1VHT BA3 11.9266
594 1G4U GDP 11.9565
595 1G4U AF3 11.9565
596 1Y63 ADP 11.9565
597 5J1S ATP 11.9718
598 1TKU 5RP 12.037
599 1G6H ADP 12.0623
600 2W2X GSP 12.0968
601 5OEC GDP 12.1827
602 3IUY AMP 12.2807
603 3GJX GTP 12.3457
604 2FJU GSP 12.3596
605 3FWY ADP 12.4204
606 1HE1 GDP 12.5
607 2VOH CIT 12.7389
608 4U5X GNP 12.9213
609 5HCN GCP 13.0268
610 2Y65 ADP 13.1507
611 5LB3 ADP 13.2716
612 1ZC3 GNP 13.2743
613 2EW1 GNP 13.4328
614 6C90 ADP 13.4615
615 2OFW ADX 13.4615
616 1UGW GAL 13.5338
617 1WS4 AMG 13.5338
618 1M26 GAL A2G 13.5338
619 1WS4 GYP 13.5338
620 1KUJ MMA 13.5338
621 1UGY GLA GLC 13.5338
622 3BD9 A3P 13.5714
623 6A20 ADP 13.5802
624 5Z2M GTP 13.6364
625 6BCB GSP 13.6986
626 3KJI ADP 13.7795
627 2VB6 ADP BEF 14.1975
628 4PFO ADP 14.1975
629 4KVG GTP 14.2308
630 1G8S MET 14.3478
631 5H67 ATP 14.3617
632 1OFH ADP 14.3678
633 4DID GDP 14.4737
634 2FSH ANP 14.5062
635 1CR1 TTP 14.527
636 5KK4 44E 14.5833
637 5G3Y ADP 14.6018
638 5HR5 ADP 14.8148
639 1RYH GNP 15.2709
640 1GP2 GDP 15.493
641 6CRK GDP 15.493
642 2PEZ GGZ 15.6425
643 2PEZ DAT 15.6425
644 5SZH GNP 15.6863
645 1S8F GDP 15.8192
646 5M7P ADP 16.0494
647 4YMU ATP 16.25
648 3AB4 THR 16.2921
649 3H4S ADP 16.2963
650 5OCG GNP 16.4021
651 4NON GDP 16.5385
652 5IFS ADP 16.9753
653 3HU3 AGS 16.9753
654 3H86 AP5 17.1875
655 3FKQ ATP 17.5926
656 3GJ5 GDP 17.6471
657 1ION ADP 17.6955
658 4KVA GTP 17.9012
659 2A9K GDP 17.9372
660 2OZE AGS 18.2099
661 1VKJ A3P 18.5965
662 5K5Z ANP 18.8272
663 5KDO GDP 18.9189
664 6CIT GNP 19.0476
665 5ZI9 FLC 19.1358
666 1GOT GDP 19.1781
667 4HDQ GNP 19.2308
668 5J1J ANP 19.2982
669 2QN6 GDP 19.3548
670 2BEK ATP 19.4553
671 2IXE ATP 19.5572
672 1RJ9 GCP 20.0617
673 1Z0J GTP 20.339
674 4YS0 ADP 20.3704
675 3LQV ADE 20.5128
676 4RZ3 ADP 20.9877
677 1G3Q ADP 21.097
678 3WXM GTP 21.2963
679 4DC2 ADE 21.4286
680 1APZ ASP 22.2222
681 5EE5 GTP 22.807
682 1UPT GTP 23.3918
683 3MJH GTP 23.5294
684 1R4A GNP 23.6364
685 1MR3 G3D 23.7569
686 5YT0 GDP 23.8095
687 2HV8 GTP 25
688 3QF7 ANP 26
689 5UWS GNP 27.2727
690 1E96 GTP 28.0788
691 4OI4 ATP 28.6957
692 2J59 GTP 28.9157
693 1O3Y GTP 28.9157
694 1J2J GTP 28.9157
695 2W83 GTP 29.8701
696 5UWU GNP 30
697 2D7D ADP 30
698 1YRB GDP 31.1728
699 4YLG GDP 32.948
700 4KBF AMP 35.8025
701 1Z0K GTP 39.1304
702 5LEF GTP 39.3939
703 5UWO GNP 40
704 5UWP GNP 42.1053
705 2D7C GTP 47.619
Pocket No.: 2; Query (leader) PDB : 3ZQ6; Ligand: ADP ALF; Similar sites found with APoc: 42
This union binding pocket(no: 2) in the query (biounit: 3zq6.bio2) has 28 residues
No: Leader PDB Ligand Sequence Similarity
1 4D4U FUC NDG GAL FUC 1.26984
2 4YMJ 4EJ 2.46914
3 2CUN 3PG 2.46914
4 2XCU C5P 2.6738
5 2ZWS PLM 3.08642
6 3LLZ GAL NGA 3.08642
7 2BHZ MAL 3.08642
8 1GQY ACP 3.08642
9 2VQD AP2 3.08642
10 5AVF TAU 3.11284
11 4B5W PYR 3.51562
12 3BY8 MLT 3.52113
13 4PVR ASP 3.54839
14 6A46 DCM 3.90625
15 5MB4 NDG 4.01235
16 2HXW FLC 4.01235
17 4PZ6 GMP 4.62963
18 1Q19 SSC 4.62963
19 2WBV SIA 4.7619
20 1UZ4 IFL 4.93827
21 1V6A TRE 4.93827
22 1FHW I5P 5.42636
23 4HZO COA 5.55556
24 1P4V GLY 6.1017
25 2EB5 OXL 6.36704
26 1JPA ANP 6.41026
27 4GYI ADP 6.48148
28 3B6O TMP 6.88259
29 4GLW NMN 6.88525
30 2NGR AF3 7.32984
31 4CU7 GIF 7.40741
32 1GRN AF3 7.88177
33 1B4U DHB 7.91367
34 4PU6 ASP 10.1523
35 2QX0 PH2 10.6918
36 6A4R ASP 11.6981
37 2XG5 EC5 12.1387
38 2XG5 EC2 12.1387
39 1HE1 AF3 12.5
40 1UJ5 5RP 15.4185
41 5D4V YGP 16.4179
42 2XYQ SAH 19.6721
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