Receptor
PDB id Resolution Class Description Source Keywords
3VPC 1.87 Å EC: 3.5.1.16 ARGX FROM SULFOLOBUS TOKODAII COMPLEXED WITH ADP SULFOLOBUS TOKODAII ATP-DEPENDENET AMINE/THIOL LIGASE FAMILY ATP-DEPENDENET AMILIGASE LIGASE
Ref.: LYSINE AND ARGININE BIOSYNTHESES MEDIATED BY A COMM CARRIER PROTEIN IN SULFOLOBUS. NAT.CHEM.BIOL. V. 9 277 2013
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ADP C:500;
B:500;
D:500;
A:500;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
427.201 C10 H15 N5 O10 P2 c1nc(...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3VPC 1.87 Å EC: 3.5.1.16 ARGX FROM SULFOLOBUS TOKODAII COMPLEXED WITH ADP SULFOLOBUS TOKODAII ATP-DEPENDENET AMINE/THIOL LIGASE FAMILY ATP-DEPENDENET AMILIGASE LIGASE
Ref.: LYSINE AND ARGININE BIOSYNTHESES MEDIATED BY A COMM CARRIER PROTEIN IN SULFOLOBUS. NAT.CHEM.BIOL. V. 9 277 2013
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 3VPC - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 3VPC - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 3VPC - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
2 3VPD - CIT C6 H8 O7 C(C(=O)O)C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ADP; Similar ligands found: 435
No: Ligand ECFP6 Tc MDL keys Tc
1 ADP 1 1
2 ATP 0.9 1
3 A2D 0.895522 0.971831
4 AQP 0.887324 1
5 5FA 0.887324 1
6 AP5 0.884058 0.971831
7 B4P 0.884058 0.971831
8 BA3 0.869565 0.971831
9 AN2 0.84507 0.985915
10 M33 0.833333 0.958333
11 ACQ 0.826667 0.972222
12 A 0.823529 0.971429
13 AMP 0.823529 0.971429
14 ACP 0.821918 0.972222
15 AR6 0.810811 0.971831
16 APR 0.810811 0.971831
17 ANP 0.802632 0.972222
18 AD9 0.8 0.972222
19 AGS 0.8 0.945946
20 SAP 0.8 0.945946
21 ADX 0.783784 0.873418
22 CA0 0.783784 0.945205
23 TAT 0.779221 0.958904
24 AMP MG 0.774648 0.891892
25 50T 0.773333 0.958333
26 ABM 0.763889 0.917808
27 APC 0.763158 0.958904
28 PRX 0.763158 0.893333
29 ATF 0.759494 0.958904
30 A22 0.753086 0.985915
31 A12 0.743243 0.958904
32 AP2 0.743243 0.958904
33 ADP MG 0.736842 0.905405
34 SRA 0.736111 0.918919
35 ADQ 0.73494 0.945205
36 25L 0.732558 0.985915
37 ADP BEF 0.727273 0.881579
38 BEF ADP 0.727273 0.881579
39 5AL 0.725 0.931507
40 2A5 0.717949 0.918919
41 A1R 0.714286 0.907895
42 AU1 0.714286 0.972222
43 ADP PO3 0.708861 0.943662
44 PAP 0.708861 0.985714
45 ATR 0.708861 0.971429
46 SRP 0.707317 0.906667
47 7D3 0.706667 0.905405
48 25A 0.702381 0.971831
49 ATP MG 0.7 0.905405
50 OAD 0.697674 0.945205
51 RBY 0.6875 0.932432
52 ADV 0.6875 0.932432
53 00A 0.686047 0.883117
54 5SV 0.682353 0.848101
55 8QN 0.682353 0.931507
56 OOB 0.682353 0.931507
57 3OD 0.681818 0.945205
58 BIS 0.681818 0.933333
59 ADP ALF 0.674699 0.87013
60 ALF ADP 0.674699 0.87013
61 AMO 0.674419 0.932432
62 4AD 0.674419 0.92
63 PAJ 0.674419 0.884615
64 GAP 0.670732 0.893333
65 MAP 0.670588 0.945946
66 DLL 0.666667 0.931507
67 ANP MG 0.666667 0.894737
68 VO4 ADP 0.666667 0.931507
69 AHX 0.666667 0.896104
70 ADP VO4 0.666667 0.931507
71 PTJ 0.662921 0.896104
72 3UK 0.659091 0.918919
73 SON 0.658228 0.932432
74 LAD 0.651685 0.860759
75 WAQ 0.651685 0.883117
76 PR8 0.651685 0.85
77 ITT 0.65 0.943662
78 7D4 0.65 0.905405
79 G5P 0.648936 0.921053
80 RAB 0.647059 0.84507
81 ADN 0.647059 0.84507
82 XYA 0.647059 0.84507
83 TXA 0.644444 0.932432
84 1ZZ 0.644444 0.839506
85 ME8 0.644444 0.839506
86 NB8 0.644444 0.896104
87 FYA 0.644444 0.905405
88 6AD 0.642857 0.909091
89 ADP BMA 0.640449 0.918919
90 G3A 0.638298 0.921053
91 DAL AMP 0.632184 0.905405
92 AFH 0.631579 0.884615
93 9SN 0.630435 0.871795
94 GTA 0.625 0.886076
95 YAP 0.623656 0.894737
96 FA5 0.623656 0.906667
97 UP5 0.622449 0.92
98 XAH 0.617021 0.839506
99 AV2 0.616279 0.917808
100 AOC 0.615385 0.821918
101 48N 0.612245 0.896104
102 4UV 0.610526 0.894737
103 TXD 0.606061 0.907895
104 DND 0.606061 0.932432
105 NAX 0.606061 0.873418
106 NXX 0.606061 0.932432
107 NAI 0.606061 0.907895
108 6V0 0.606061 0.896104
109 5N5 0.605634 0.819444
110 5AS 0.604938 0.77907
111 A4P 0.60396 0.843373
112 DAT 0.60241 0.905405
113 A2R 0.602273 0.985915
114 TXE 0.6 0.907895
115 OMR 0.6 0.851852
116 4UU 0.597938 0.894737
117 A A 0.597826 0.944444
118 A4D 0.597222 0.819444
119 5CD 0.597222 0.805556
120 AP0 0.594059 0.896104
121 4TC 0.594059 0.896104
122 A3P 0.592593 0.971429
123 139 0.592233 0.873418
124 T5A 0.592233 0.841463
125 7D5 0.592105 0.878378
126 ATP A A A 0.589474 0.930556
127 LAQ 0.585859 0.839506
128 MYR AMP 0.585106 0.817073
129 YLP 0.58 0.819277
130 UPA 0.578431 0.907895
131 7DD 0.578313 0.985714
132 ADJ 0.576923 0.851852
133 3AM 0.576923 0.929577
134 COD 0.575472 0.811765
135 NAD 0.575472 0.931507
136 3AT 0.574713 0.971831
137 JB6 0.574468 0.883117
138 4UW 0.574257 0.860759
139 EP4 0.573333 0.753247
140 A2P 0.573171 0.957143
141 CNA 0.571429 0.932432
142 TYM 0.568627 0.906667
143 PPS 0.568182 0.873418
144 TYR AMP 0.56701 0.881579
145 DTA 0.565789 0.786667
146 M2T 0.565789 0.734177
147 AR6 AR6 0.565657 0.917808
148 A3D 0.564815 0.918919
149 3DH 0.564103 0.773333
150 G5A 0.563218 0.77907
151 YLB 0.563107 0.819277
152 YLC 0.563107 0.839506
153 AMP DBH 0.561224 0.893333
154 MTA 0.558442 0.773333
155 DTP 0.556818 0.905405
156 AHZ 0.554455 0.817073
157 NA7 0.553191 0.958904
158 IOT 0.552381 0.831325
159 7MD 0.55 0.8625
160 ZAS 0.55 0.766234
161 IMO 0.548781 0.929577
162 YLA 0.54717 0.819277
163 NAE 0.544643 0.894737
164 TAD 0.544554 0.884615
165 A5A 0.544444 0.807229
166 2AM 0.544304 0.943662
167 TSB 0.543478 0.819277
168 6RE 0.54321 0.759494
169 AYB 0.542056 0.809524
170 NAQ 0.539823 0.871795
171 V3L 0.539326 0.971831
172 ARG AMP 0.539216 0.829268
173 AF3 ADP 3PG 0.538462 0.8375
174 SSA 0.538462 0.8
175 LA8 ALF 3PG 0.538462 0.8375
176 ALF ADP 3PG 0.538462 0.8375
177 ZID 0.535088 0.918919
178 LPA AMP 0.533981 0.817073
179 54H 0.532609 0.788235
180 52H 0.532609 0.77907
181 VMS 0.532609 0.788235
182 BTX 0.53211 0.841463
183 J7C 0.53012 0.769231
184 A3N 0.53012 0.786667
185 5X8 0.528736 0.763158
186 BT5 0.527273 0.831325
187 5CA 0.526882 0.8
188 53H 0.526882 0.77907
189 ARU 0.526316 0.860759
190 EAD 0.525862 0.873418
191 RGT 0.525253 0.958904
192 OVE 0.52439 0.905405
193 S4M 0.52381 0.666667
194 7DT 0.522727 0.985714
195 GDP 0.522222 0.92
196 DDS 0.522222 0.878378
197 AVV 0.521277 0.896104
198 NDE 0.521008 0.932432
199 7MC 0.518868 0.841463
200 DSH 0.518072 0.725
201 MAO 0.517647 0.759036
202 LSS 0.515789 0.761364
203 DSZ 0.515789 0.8
204 NSS 0.515789 0.8
205 P5A 0.515464 0.744444
206 DZD 0.513514 0.884615
207 NVA LMS 0.510417 0.761364
208 12D 0.509615 0.785714
209 NAD IBO 0.509091 0.87013
210 M24 0.508772 0.85
211 YLY 0.508772 0.809524
212 P1H 0.508333 0.851852
213 5AD 0.506849 0.746479
214 GJV 0.505882 0.75
215 LEU LMS 0.505155 0.761364
216 G A A A 0.504505 0.871795
217 4TA 0.504505 0.807229
218 NAJ PZO 0.504425 0.848101
219 KAA 0.5 0.752809
220 NDC 0.5 0.871795
221 7D7 0.5 0.743243
222 71V 0.5 0.907895
223 A3G 0.5 0.8
224 128 0.5 0.776471
225 GSU 0.5 0.77907
226 N0B 0.495726 0.819277
227 NJP 0.495495 0.945946
228 ODP 0.495495 0.909091
229 2SA 0.494624 0.932432
230 6C6 0.494505 0.881579
231 SFG 0.494382 0.75
232 0WD 0.491071 0.921053
233 YSA 0.490196 0.77907
234 PO4 PO4 A A A A PO4 0.489796 0.902778
235 6IA 0.48913 0.8375
236 SAM 0.48913 0.690476
237 A7D 0.488636 0.776316
238 6FA 0.488 0.841463
239 FB0 0.487805 0.804598
240 NAJ PYZ 0.487179 0.85
241 IDP 0.483516 0.918919
242 A5D 0.483516 0.786667
243 SA8 0.483516 0.707317
244 MHZ 0.483146 0.697674
245 PGS 0.483146 0.883117
246 D5M 0.482353 0.878378
247 DA 0.482353 0.878378
248 NEC 0.482353 0.746667
249 NIA 0.481928 0.822785
250 Y3J 0.480519 0.726027
251 FAD 0.480315 0.851852
252 FAS 0.480315 0.851852
253 FDA 0.48 0.833333
254 N6P 0.479592 0.915493
255 GGZ 0.479167 0.825
256 SAH 0.478261 0.74359
257 SAI 0.478261 0.734177
258 NPW 0.477477 0.886076
259 NDP 0.477477 0.921053
260 AAM 0.476744 0.971429
261 AMZ 0.47561 0.916667
262 C2R 0.47561 0.90411
263 A A A 0.474747 0.905405
264 GTP 0.473684 0.92
265 U A G G 0.473684 0.883117
266 SMM 0.473684 0.686047
267 TXP 0.473214 0.921053
268 NZQ 0.473214 0.909091
269 A3S 0.47191 0.810811
270 AMP NAD 0.470588 0.881579
271 SFD 0.46875 0.734043
272 AIR 0.468354 0.901408
273 AAT 0.468085 0.707317
274 EEM 0.468085 0.690476
275 Z5A 0.466667 0.77907
276 7C5 0.466667 0.818182
277 J7V 0.466667 0.833333
278 62F 0.465649 0.8625
279 FAY 0.462121 0.8625
280 ETB 0.461538 0.833333
281 DCA 0.461538 0.823529
282 A3T 0.461538 0.821918
283 A6D 0.46 0.722892
284 A U 0.459459 0.87013
285 6K6 0.459184 0.930556
286 GEK 0.459184 0.7375
287 RFL 0.458647 0.821429
288 S7M 0.458333 0.690476
289 NAP 0.458333 0.945205
290 4YB 0.457944 0.761364
291 WSA 0.454545 0.788235
292 TAP 0.454545 0.907895
293 FNK 0.454545 0.804598
294 COA 0.453782 0.823529
295 0T1 0.453782 0.823529
296 101 0.453488 0.878378
297 XNP 0.452174 0.873418
298 NA0 0.45082 0.932432
299 7RP 0.448276 0.928571
300 GP3 0.446809 0.921053
301 TM1 0.446602 0.77381
302 APU 0.446429 0.894737
303 PUA 0.445378 0.884615
304 V1N 0.443396 0.917808
305 7RA 0.443182 0.957747
306 30N 0.442623 0.752688
307 CAO 0.442623 0.795455
308 AMX 0.442623 0.833333
309 COS 0.442623 0.804598
310 ACK 0.44186 0.861111
311 QQY 0.44186 0.815789
312 649 0.441441 0.744444
313 0UM 0.44 0.698795
314 NHD 0.439655 0.905405
315 CMX 0.439024 0.823529
316 SCO 0.439024 0.823529
317 GCP 0.438776 0.896104
318 8BR 0.438202 0.906667
319 GNH 0.4375 0.907895
320 3AD 0.4375 0.805556
321 62X 0.435644 0.666667
322 ACO 0.435484 0.795455
323 FCX 0.435484 0.795455
324 FAM 0.435484 0.804598
325 GNP 0.434343 0.896104
326 NMX 0.433071 0.76087
327 MGP 0.43299 0.884615
328 PLP AAD 0.432203 0.741573
329 26A 0.432099 0.763158
330 HAX 0.432 0.804598
331 K15 0.431373 0.682353
332 DG1 0.430894 0.921053
333 1DG 0.430894 0.921053
334 QQX 0.430233 0.805195
335 2VA 0.430108 0.8
336 S8M 0.43 0.759494
337 2MC 0.429688 0.769231
338 3KK 0.428571 0.804598
339 6G0 0.428571 0.884615
340 FYN 0.428571 0.823529
341 P5F 0.428571 0.823529
342 NAD BBN 0.428571 0.841463
343 U G A 0.427481 0.839506
344 AS 0.426966 0.833333
345 FAI 0.426966 0.916667
346 RMB 0.426966 0.873239
347 1RB 0.425287 0.885714
348 MCD 0.425197 0.804598
349 OXK 0.425197 0.804598
350 COK 0.425197 0.804598
351 CA6 0.425197 0.729167
352 SOP 0.425197 0.804598
353 G1R 0.424242 0.907895
354 CC5 0.423077 0.816901
355 SXZ 0.423077 0.710843
356 F2N 0.422535 0.813953
357 NAD CJ3 0.422222 0.811765
358 ANZ 0.422018 0.8
359 CMC 0.421875 0.804598
360 CO6 0.421875 0.804598
361 1VU 0.421875 0.795455
362 ZDA 0.421053 0.864865
363 GDD 0.420561 0.884615
364 GKE 0.420561 0.884615
365 GDC 0.420561 0.884615
366 NFD 0.420168 0.883117
367 GSP 0.42 0.873418
368 D3Y 0.42 0.789474
369 MC4 0.419847 0.76087
370 3L1 0.419753 0.773333
371 3D1 0.419753 0.773333
372 FA9 0.41958 0.864198
373 5GP 0.419355 0.906667
374 G 0.419355 0.906667
375 KB1 0.419048 0.698795
376 SCD 0.418605 0.823529
377 CAJ 0.418605 0.804598
378 2BA 0.417582 0.915493
379 CMP 0.417582 0.901408
380 SO8 0.416667 0.789474
381 N01 0.416667 0.905405
382 VRT 0.416667 0.769231
383 3HC 0.415385 0.813953
384 A1S 0.415385 0.804598
385 BCO 0.415385 0.804598
386 IVC 0.415385 0.813953
387 MLC 0.415385 0.804598
388 1HE 0.415385 0.786517
389 NMN AMP PO4 0.415254 0.87013
390 2FA 0.414634 0.813333
391 MGO 0.414141 0.860759
392 3NZ 0.413462 0.782051
393 MCA 0.412214 0.795455
394 CAA 0.412214 0.813953
395 YE1 0.412214 0.813953
396 COO 0.412214 0.804598
397 GAV 0.411765 0.884615
398 P2P 0.411111 0.902778
399 JLN 0.411111 0.890411
400 ZZB 0.410256 0.77381
401 CNV FAD 0.410072 0.793103
402 SCA 0.409091 0.804598
403 RP1 0.409091 0.842105
404 103 0.409091 0.837838
405 2CP 0.409091 0.795455
406 SP1 0.409091 0.842105
407 PAX 0.408 0.829268
408 FAD NBT 0.407143 0.75
409 NVA 2AD 0.40625 0.74359
410 COW 0.406015 0.795455
411 BYC 0.406015 0.804598
412 2KQ 0.406015 0.786517
413 COF 0.406015 0.786517
414 3CP 0.406015 0.804598
415 IRC 0.406015 0.813953
416 1GZ 0.406015 0.795455
417 HGG 0.406015 0.804598
418 CA8 0.406015 0.729167
419 G2P 0.405941 0.884615
420 SLU 0.404959 0.770115
421 U A C C 0.404959 0.858974
422 RBZ 0.404494 0.849315
423 1CZ 0.404412 0.795455
424 BCA 0.402985 0.795455
425 FAQ 0.402985 0.804598
426 4CA 0.402985 0.795455
427 MTP 0.402439 0.730769
428 8OD 0.402062 0.945205
429 CO7 0.401515 0.804598
430 DAL FAD PER 0.401408 0.809524
431 G2R 0.4 0.884615
432 HXC 0.4 0.786517
433 ENQ 0.4 0.916667
434 GMV 0.4 0.896104
435 GRA 0.4 0.804598
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3VPC; Ligand: ADP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 3vpc.bio1) has 22 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 3VPC; Ligand: ADP; Similar sites found: 367
This union binding pocket(no: 2) in the query (biounit: 3vpc.bio1) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2AQX ATP 0.0001317 0.46934 1.06383
2 2YAB AMP 0.001037 0.42447 1.06383
3 3EKK GS2 0.001182 0.44958 1.41844
4 2XVD AS6 0.0009107 0.44482 1.41844
5 4UWH JXM 0.002125 0.43878 1.41844
6 3BU5 ATP 0.0005675 0.42957 1.41844
7 5TA6 79D 0.002308 0.42594 1.41844
8 5JKG 6LF 0.006097 0.41911 1.41844
9 1YQC GLV 0.01585 0.40306 1.76471
10 4IX4 ADP 0.00006894 0.47535 1.77305
11 2CSN CKI 0.0003662 0.45845 1.77305
12 4EUU BX7 0.0004116 0.45629 1.77305
13 2YAK OSV 0.0006066 0.45398 1.77305
14 3GC8 B45 0.0004 0.44924 1.77305
15 4ZS4 ATP 0.0003233 0.44186 1.77305
16 3FHR P4O 0.001323 0.43528 1.77305
17 1CM8 ANP 0.0002766 0.43369 1.77305
18 5A6N U7E 0.000851 0.42802 1.77305
19 2J7T 274 0.002531 0.42716 1.77305
20 2X2M X2M 0.001638 0.42371 1.77305
21 4CYI ATP 0.001723 0.41814 1.77305
22 3PDT ADP 0.002262 0.43751 1.81818
23 3RE4 TO1 0.00004669 0.44598 1.93798
24 1ZTH ADP 0.00009976 0.43183 1.93798
25 1ZP9 ATP 0.0002377 0.43133 1.93798
26 1IOW ADP 0.0000009023 0.58398 2.12766
27 1IOW PHY 0.0000009023 0.58398 2.12766
28 2B9J ADP 0.0001275 0.48987 2.12766
29 2JDR GLY ARG PRO ARG THR THR SER PHE ALA GLU 0.0005224 0.4833 2.12766
30 2JDR L20 0.0005224 0.4833 2.12766
31 2B9I ADP 0.0001785 0.47803 2.12766
32 4BFM ANP 0.00006749 0.47627 2.12766
33 3TKI S25 0.0007629 0.473 2.12766
34 3ZRM ZRM 0.00004863 0.46932 2.12766
35 1M0W ANP 0.00003576 0.46461 2.12766
36 4AU8 Z3R 0.00099 0.46444 2.12766
37 5JFS 6K0 0.0008679 0.45915 2.12766
38 4E93 GUI 0.000647 0.45574 2.12766
39 2B9H ADP 0.0001777 0.45406 2.12766
40 5UIU 8CG 0.0006298 0.45328 2.12766
41 2B9F ADP 0.0001418 0.4523 2.12766
42 2QK4 ATP 0.00002396 0.44865 2.12766
43 3F7Z 34O 0.0001958 0.44808 2.12766
44 2QLU ADE 0.001948 0.44622 2.12766
45 1ZY5 ANP 0.0001998 0.44214 2.12766
46 3KN5 ANP 0.0001001 0.44134 2.12766
47 3PLS ANP 0.000279 0.43488 2.12766
48 5G1X ADP 0.0005151 0.42797 2.12766
49 5LXM ADP 0.0008903 0.41875 2.12766
50 4GLW 0XT 0.000385 0.40478 2.12766
51 4AUA 4AU 0.002195 0.40417 2.12766
52 2HY0 306 0.001333 0.40213 2.12766
53 5EW9 5VC 0.01111 0.4421 2.21402
54 3E5A VX6 0.001387 0.41252 2.23881
55 3TXO 07U 0.000006975 0.49052 2.48227
56 1XJD STU 0.00007947 0.46825 2.48227
57 4H3Q ANP 0.0001702 0.46682 2.48227
58 4CLI 5P8 0.0007929 0.46428 2.48227
59 5BVE 4VG 0.001635 0.46344 2.48227
60 4NM5 ADP 0.000264 0.45882 2.48227
61 3HMO STU 0.0007883 0.45396 2.48227
62 5HES 032 0.0004669 0.44644 2.48227
63 5GZ9 ANP 0.0005558 0.44526 2.48227
64 4U0I 0LI 0.001147 0.44349 2.48227
65 4H3P ANP 0.0003509 0.43857 2.48227
66 5N87 N66 0.002094 0.43737 2.48227
67 4G31 0WH 0.002791 0.42936 2.48227
68 2PVN P63 0.0003018 0.41734 2.48227
69 4D2S DYK 0.0005204 0.4151 2.48227
70 3VRY B43 0.001158 0.41234 2.48227
71 2JLD AG1 0.0004714 0.41145 2.48227
72 4OUC 5ID 0.0008764 0.40835 2.48227
73 3TDV GDP 0.002477 0.4034 2.48227
74 5IH9 6BF 0.0002133 0.48112 2.83688
75 4AXD ANP 0.0003043 0.47699 2.83688
76 3MVH WFE 0.0002293 0.47224 2.83688
77 5MY8 RXZ 0.0002015 0.46766 2.83688
78 4JR7 GNP 0.00008274 0.45997 2.83688
79 3C0G 3AM 0.00003843 0.4554 2.83688
80 2XK9 XK9 0.001447 0.44445 2.83688
81 5AWM ANP 0.00004413 0.44298 2.83688
82 5VC5 96M 0.001147 0.43895 2.83688
83 3E7O 35F 0.002371 0.43114 2.83688
84 1Z82 G3P 0.02193 0.40684 2.83688
85 1Z82 G3H 0.02439 0.40445 2.83688
86 3AKK ADP 0.003549 0.40242 2.83688
87 1BYG STU 0.00008506 0.44744 2.8777
88 2HK5 1BM 0.0008013 0.43158 2.96296
89 3SXS PP2 0.0001235 0.47517 2.98507
90 2VPQ ANP 0.00000009105 0.60397 3.19149
91 4GYI ADP 0.00001449 0.54636 3.19149
92 3V4S ATP 0.000003563 0.53469 3.19149
93 3V4S ADP 0.00001802 0.52845 3.19149
94 2F2U M77 0.0001926 0.49907 3.19149
95 4OH4 ANP 0.00008462 0.49242 3.19149
96 3E8N VRA 0.000313 0.48364 3.19149
97 3E8N ATP 0.000313 0.48364 3.19149
98 4DFU QUE 0.0009696 0.47654 3.19149
99 5LPZ ADP 0.00003991 0.47226 3.19149
100 3UDZ ADP 0.00006356 0.47165 3.19149
101 3WVR AMP 0.00002902 0.46806 3.19149
102 5W4W 9WG 0.0003171 0.46773 3.19149
103 5TDF ADP 0.0001772 0.45846 3.19149
104 3GNI ATP 0.0004243 0.45236 3.19149
105 5TO8 7FM 0.001343 0.44952 3.19149
106 3M2W L8I 0.00005551 0.44816 3.19149
107 5LPB ADP 0.00003341 0.44664 3.19149
108 4I6H 1C8 0.001163 0.4419 3.19149
109 3SLS ANP 0.0006154 0.44144 3.19149
110 5C4L 4XR 0.001747 0.43555 3.19149
111 4Y93 746 0.001817 0.42716 3.19149
112 4I94 ANP 0.0005158 0.42656 3.19149
113 4KBA 1QM 0.0002817 0.42371 3.19149
114 3PVW QRX 0.0005758 0.42137 3.19149
115 2FB3 GTP 0.003537 0.42087 3.19149
116 2FB3 MET 0.0003097 0.41656 3.19149
117 2FB3 5AD 0.0005004 0.41528 3.19149
118 3PP0 03Q 0.0007072 0.41461 3.19149
119 4R78 AMP 0.0002978 0.41096 3.19149
120 5C4L SIS 0.006713 0.41013 3.19149
121 3HZT J60 0.0006012 0.40676 3.19149
122 3SRV S19 0.0002673 0.43637 3.2491
123 3AQV TAK 0.001548 0.41016 3.26087
124 4F4P 0SB 0.001115 0.46965 3.2967
125 4TWP AXI 0.0007096 0.46754 3.32103
126 5FBN 5WF 0.0009663 0.45088 3.32103
127 1UNH IXM 0.0004341 0.41966 3.36538
128 5L8L ADP 0.0003929 0.41824 3.4188
129 4YZN 4K5 0.0001179 0.4735 3.5461
130 3RI1 3RH 0.0001836 0.47122 3.5461
131 3OFM 4B0 0.00001741 0.46639 3.5461
132 3ORK AGS 0.0003096 0.45975 3.5461
133 1VJY 460 0.0006432 0.45586 3.5461
134 2R5T ANP 0.000293 0.45488 3.5461
135 2Y6O 1N1 0.0005137 0.44471 3.5461
136 4U44 3D9 0.0003203 0.44062 3.5461
137 5UKL SIX 0.001131 0.4392 3.5461
138 2PVF ACP 0.0004257 0.42985 3.5461
139 5LVP ATP 0.0003333 0.42668 3.5461
140 5AX9 4KT 0.0006692 0.42623 3.5461
141 3HAV ATP 0.00004713 0.41553 3.5461
142 5C1P DAL DAL 0.000001238 0.5614 3.90071
143 5C1P ADP 0.00000004204 0.55941 3.90071
144 2PUL ACP 0.00001874 0.47921 3.90071
145 4YLL 4E3 0.0001459 0.46961 3.90071
146 3VHE 42Q 0.0005732 0.45505 3.90071
147 5HX8 66P 0.0004742 0.45367 3.90071
148 3LXK MI1 0.0005337 0.45317 3.90071
149 4ASE AV9 0.0007482 0.44689 3.90071
150 4O1P ANP 0.000365 0.43683 3.90071
151 4AT3 LTI 0.001779 0.43378 3.90071
152 3DAK ANP 0.000225 0.43182 3.90071
153 3HRD MCN 0.01202 0.4038 3.90071
154 2A19 ANP 0.001012 0.46397 4
155 4O4F IHP 0.0002095 0.46879 4.03226
156 4O4F ATP 0.000198 0.46798 4.03226
157 5VCV 1N1 0.0004737 0.45008 4.18006
158 3ORQ ADP 0.0000007442 0.5696 4.25532
159 2PZI AXX 0.0001777 0.49463 4.25532
160 4N70 2HX 0.0003792 0.48306 4.25532
161 4XV1 904 0.0002442 0.47568 4.25532
162 4Y0X ADP 0.00003586 0.46244 4.25532
163 4KS7 X4Z 0.0001333 0.46209 4.25532
164 3CY2 MB9 0.0002565 0.45934 4.25532
165 3NW7 LGV 0.002242 0.44588 4.25532
166 1K3A ACP 0.00009608 0.44325 4.25532
167 5KO1 6UY 0.000217 0.43901 4.25532
168 5JGA 6KC 0.0016 0.4386 4.25532
169 3W0O HY0 0.002512 0.4273 4.25532
170 3W0O ADP 0.002512 0.4273 4.25532
171 4L9I 8PR 0.000599 0.42471 4.25532
172 5IQD GNP 0.005373 0.42043 4.25532
173 4M69 ANP 0.001767 0.41854 4.25532
174 3ALN ANP 0.001843 0.41748 4.25532
175 5BYZ 4WE 0.007159 0.40892 4.25532
176 5IQD RIO 0.01205 0.40591 4.25532
177 1IA9 ANP 0.00006996 0.49075 4.28571
178 4CQE CQE 0.0005834 0.44241 4.31655
179 2IO8 ADP 0.000005662 0.53114 4.60993
180 4NFN 2KC 0.0006535 0.45766 4.60993
181 2VN9 GVD 0.00001201 0.45628 4.60993
182 2Q7D ANP 0.0001085 0.4468 4.60993
183 5UR1 YY9 0.001842 0.44669 4.60993
184 2V7O DRN 0.00003072 0.44505 4.60993
185 5EOB 5QQ 0.003466 0.44346 4.60993
186 4YZC STU 0.002288 0.43688 4.60993
187 5CEO 50D 0.0003938 0.43444 4.60993
188 3KRL KRL 0.001412 0.4264 4.60993
189 4BTK DTQ 0.0007803 0.4234 4.60993
190 2RIO ADP 0.0007791 0.42017 4.60993
191 5IXJ THR 0.005313 0.41455 4.60993
192 2WEL K88 0.0002794 0.40483 4.60993
193 3O0G 3O0 0.0004019 0.43056 4.69799
194 5MW8 ATP 0.0001 0.47649 4.96454
195 4P5Z Q7M 0.0003763 0.47288 4.96454
196 2X4Z X4Z 0.000317 0.47215 4.96454
197 3DLS ADP 0.00002056 0.47043 4.96454
198 4UX9 ANP 0.0001715 0.4691 4.96454
199 2WU6 DKI 0.0001012 0.4667 4.96454
200 4IZY 1J2 0.0002067 0.46565 4.96454
201 4OTH DRN 0.000177 0.464 4.96454
202 4JDI ANP 0.0003903 0.44549 4.96454
203 4IJP 1EH 0.0007007 0.43535 4.96454
204 5DMZ ADP 0.0005881 0.4306 4.96454
205 3OBT SLB 0.01325 0.42831 4.96454
206 4G17 0VN 0.0003289 0.42669 4.96454
207 5CKW ANP 0.0001676 0.42448 4.96454
208 2RIF AMP 0.004435 0.42392 4.96454
209 1V0O INR 0.001393 0.4196 4.96454
210 4EWH T77 0.0008526 0.44446 5.09091
211 2VZ6 FEF 0.000925 0.46056 5.11182
212 5DA3 58V 0.0006206 0.40653 5.28302
213 1NF8 ISC 0.01557 0.40214 5.31401
214 1O9U ADZ 0.000008074 0.5937 5.31915
215 3K5I ADP 0.000005092 0.53407 5.31915
216 3WO0 ALA 0.00002519 0.52504 5.31915
217 3X01 AMP 0.0001791 0.51676 5.31915
218 5LXC 7AA 0.00001776 0.4751 5.31915
219 3TII ANP 0.00004134 0.45648 5.31915
220 4USF 6UI 0.0008962 0.43841 5.31915
221 2IF8 ADP 0.00002103 0.43462 5.31915
222 3K5I AIR 0.00005025 0.43417 5.31915
223 5MJA 7O3 0.0002564 0.43265 5.31915
224 2BKK ADP 0.0007933 0.41948 5.31915
225 1GQ2 OXL 0.0312 0.40109 5.31915
226 4JOB TLA 0.0386 0.40002 5.31915
227 5W2I I3P 0.0003398 0.45617 5.44747
228 5W2I ADP 0.0003398 0.45617 5.44747
229 3ETH ATP 0.000001626 0.5489 5.67376
230 5HVJ ANP 0.00006982 0.5367 5.67376
231 4L3L 5FI 0.00003589 0.50704 5.67376
232 2CFM AMP 0.00434 0.43315 5.67376
233 3QCQ 3Q0 0.008901 0.44073 5.76923
234 3QF7 ANP 0.009494 0.40357 6
235 4WHZ 3NL 0.0007215 0.4703 6.02837
236 4QMN DB8 0.0005371 0.46344 6.02837
237 4K33 ACP 0.0002294 0.4496 6.02837
238 5HCY 60D 0.001841 0.44775 6.02837
239 4OCV ANP 0.0003455 0.44267 6.02837
240 4BKJ STI 0.005374 0.40717 6.02837
241 3TTI KBI 0.0009988 0.40562 6.02837
242 2OFV 242 0.0005183 0.46412 6.13718
243 4C5N ACP 0.005679 0.40615 6.15942
244 4CSV STI 0.002165 0.42049 6.18182
245 5H2U 1N1 0.0014 0.4127 6.36704
246 2PYW ADP 0.000007238 0.51528 6.38298
247 2YW2 ATP 0.00007666 0.48397 6.38298
248 3PE2 E1B 0.0003874 0.48053 6.38298
249 3V8S 0HD 0.00005821 0.46225 6.38298
250 4OCJ NDG 0.00187 0.44194 6.38298
251 5JZJ AN2 0.0003191 0.43454 6.38298
252 4ANW O92 0.007621 0.409 6.38298
253 4LO2 GAL BGC 0.02934 0.4067 6.38298
254 4A4X JUP 0.0000574 0.49274 6.45161
255 1I7L ATP 0.00000005737 0.61521 6.73759
256 5USZ SKE 0.0000557 0.49519 6.73759
257 5LI9 ACP 0.00009156 0.48568 6.73759
258 5LI1 ANP 0.0001219 0.47075 6.73759
259 1OUK 084 0.003023 0.47018 6.73759
260 2Z7R STU 0.0001748 0.46422 6.73759
261 3I0O ADP 0.00003265 0.4539 6.73759
262 1U59 STU 0.0004064 0.43583 6.73759
263 4LOO SB4 0.0003917 0.43333 6.73759
264 4IDT T28 0.0007566 0.42185 6.73759
265 4DC2 ADE 0.00002113 0.42017 6.73759
266 3KMW ATP 0.0002849 0.43076 6.97674
267 2ZV2 609 0.0001025 0.51241 7.0922
268 4UAL 3FV 0.00003315 0.47658 7.0922
269 5T8O 76Z 0.0001214 0.47548 7.0922
270 5DEY 59T 0.0012 0.46391 7.0922
271 3UIM ANP 0.0002879 0.44129 7.0922
272 3GGF GVD 0.0001952 0.43943 7.0922
273 3SXF BK5 0.0003613 0.46966 7.44681
274 4FL3 ANP 0.0002243 0.45971 7.44681
275 4BHN BH9 0.00023 0.45445 7.44681
276 5I35 ANP 0.000169 0.44175 7.44681
277 4OAV ACP 0.000744 0.42026 7.44681
278 5DBX ANP 0.0005821 0.41496 7.44681
279 4WW7 AMP 0.0001636 0.46542 7.48663
280 3BMQ AX5 0.02819 0.40135 7.63889
281 5U6C 7YS 0.0003313 0.45265 7.80142
282 5M06 ADP 0.000139 0.43847 7.80142
283 2F57 23D 0.0002158 0.43599 7.80142
284 5DRB 5FJ 0.005627 0.4277 7.80142
285 4U98 ACP 0.0005627 0.42591 7.80142
286 3LXN MI1 0.00009558 0.46993 7.86164
287 3GQI ACP 0.0008865 0.42321 7.9646
288 2V58 LZJ 0.000001394 0.42625 8.01782
289 5HQ0 LZ9 0.00008691 0.47163 8.15603
290 5X8I SQZ 0.0001458 0.45289 8.15603
291 4GJ3 0XP 0.0002294 0.47383 8.27815
292 5UOX 8GY 0.000395 0.44947 8.48709
293 1U5R ATP 0.0001265 0.44885 8.51064
294 4YMJ 4EJ 0.00002233 0.42725 8.86525
295 3G5D 1N1 0.0002075 0.50101 9.21986
296 4CRL C1I 0.0003774 0.46741 9.21986
297 5EFQ ADP 0.00007134 0.46396 9.21986
298 4NST ADP 0.00007969 0.46217 9.21986
299 1Y57 MPZ 0.0003524 0.45356 9.21986
300 2R85 AMP 0.004493 0.41772 9.21986
301 2H8H H8H 0.001489 0.41174 9.21986
302 3LQV ADE 0.004258 0.45535 9.56522
303 3KRR DQX 0.0006678 0.48327 9.57447
304 4QTB 38Z 0.0001878 0.47432 9.57447
305 4WB7 ATP 0.0003734 0.4704 9.57447
306 4WB6 ATP 0.0001968 0.46994 9.57447
307 4Y8D 49J 0.0001239 0.45423 9.57447
308 5VZ0 ADP 0.0000005084 0.53862 9.92908
309 1E4E ADP 0.000008522 0.50826 9.92908
310 4CFU 2WC 0.0001235 0.49615 9.92908
311 4BCN T9N 0.0001683 0.49574 9.92908
312 2XMY CDK 0.0007618 0.48135 9.92908
313 1OPK P16 0.000508 0.45884 9.92908
314 3GC0 AMP 0.0001617 0.43671 9.92908
315 4BCM T7Z 0.00006285 0.42987 9.92908
316 4BCQ TJF 0.0002946 0.41532 9.92908
317 1PK8 ATP 0.00000001514 0.64246 10.2837
318 1AUX AGS 0.0000004716 0.59245 10.2837
319 2VQD AP2 0.0000001167 0.58921 10.2837
320 2WQN ADP 0.0004 0.47787 10.2837
321 4WNP 3RJ 0.0001084 0.43806 10.2837
322 4XLI 1N1 0.0001744 0.44195 10.4478
323 1W2D 4IP 0.001669 0.43349 10.566
324 1W2D ADP 0.0001314 0.43325 10.566
325 1TQP ATP 0.00004652 0.49258 10.6383
326 4E1Z 0MX 0.0001791 0.46588 10.6383
327 4WNK 453 0.001072 0.44328 10.6383
328 1KJ8 ATP 0.00005753 0.41799 10.6383
329 1KJ8 GAR 0.00006195 0.4132 10.6383
330 4MV1 ADP 0.00003355 0.51176 10.9929
331 4XH0 ADP 0.0002369 0.50907 10.9929
332 2GU8 796 0.0001745 0.5045 11.3475
333 1RE8 BD2 0.0003802 0.4809 11.3475
334 2QCS ANP 0.000177 0.4719 11.3475
335 3FHI ANP 0.000186 0.47098 11.3475
336 2QF7 AGS 0.0002384 0.46816 11.3475
337 4X7Q 3YR 0.0004041 0.46228 11.3475
338 3IDB ANP 0.0002559 0.45939 11.3475
339 3IGO ANP 0.0003424 0.45206 11.3475
340 2WEI VGG 0.001017 0.40925 11.3475
341 4NZN ANP 0.000002823 0.42214 11.7021
342 4NZN 2OU 0.000002823 0.42214 11.7021
343 4F9C 0SX 0.0001806 0.44289 11.8056
344 5LXT ACP 0.0000002282 0.58724 11.8881
345 5LXT GTP 0.02635 0.4125 11.8881
346 5C03 AGS 0.00007686 0.46111 12.4113
347 4WOV 3SM 0.001002 0.40321 12.4113
348 1PHK ATP 0.0003473 0.44228 12.766
349 4ME6 ADP 0.00002424 0.43681 12.766
350 3KAL ADP 0.00008941 0.41791 12.766
351 2HGS ADP 0.00001436 0.51183 13.4752
352 4FG8 ATP 0.0002363 0.45414 13.4752
353 4XYM A12 0.00006784 0.46909 13.8298
354 2YRX AMP 0.0002475 0.41007 14.1844
355 2R7K AMZ 0.002378 0.42688 14.539
356 4LRJ ANP 0.0003184 0.43302 14.7929
357 5EYK 5U5 0.000978 0.44191 15.2542
358 4AZW ATP 0.001432 0.4214 16.3121
359 3VOT ADP 0.00001209 0.46033 17.0213
360 4C2W ANP 0.0001901 0.42974 17.3077
361 1EHI ADP 0.0000006067 0.55287 17.3759
362 4Q5H ANP 0.0004843 0.45879 19.7368
363 4C2V YJA 0.001121 0.44246 20.4545
364 1Q8Y ADP 0.0001831 0.45858 21.2766
365 1Q8Y ADE 0.00006131 0.43017 21.2766
366 1T36 ADP 0.0001173 0.48134 22.3404
367 1GSA ADP 0.000000006271 0.65268 35.461
Pocket No.: 3; Query (leader) PDB : 3VPC; Ligand: ADP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 3vpc.bio1) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 3VPC; Ligand: ADP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 3vpc.bio1) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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