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Receptor
PDB id Resolution Class Description Source Keywords
3VGL 1.55 Å EC: 2.7.1.2 CRYSTAL STRUCTURE OF A ROK FAMILY GLUCOKINASE FROM STREPTOMY GRISEUS IN COMPLEX WITH GLUCOSE AND AMPPNP STREPTOMYCES GRISEUS ROK FAMILY GLUCOKINASE TRANSFERASE
Ref.: SUBSTRATE RECOGNITION MECHANISM AND SUBSTRATE-DEPEN CONFORMATIONAL CHANGES OF AN ROK FAMILY GLUCOKINASE STREPTOMYCES GRISEUS J.BACTERIOL. V. 194 607 2012
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ANP A:325;
Valid;
none;
submit data
506.196 C10 H17 N6 O12 P3 c1nc(...
BGC A:324;
Valid;
none;
submit data
180.156 C6 H12 O6 C([C@...
NA A:323;
Part of Protein;
none;
submit data
22.99 Na [Na+]
ZN A:322;
Part of Protein;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3VGL 1.55 Å EC: 2.7.1.2 CRYSTAL STRUCTURE OF A ROK FAMILY GLUCOKINASE FROM STREPTOMY GRISEUS IN COMPLEX WITH GLUCOSE AND AMPPNP STREPTOMYCES GRISEUS ROK FAMILY GLUCOKINASE TRANSFERASE
Ref.: SUBSTRATE RECOGNITION MECHANISM AND SUBSTRATE-DEPEN CONFORMATIONAL CHANGES OF AN ROK FAMILY GLUCOKINASE STREPTOMYCES GRISEUS J.BACTERIOL. V. 194 607 2012
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 5 families.
1 3VGM - BGC C6 H12 O6 C([C@@H]1[....
2 3VGL - BGC C6 H12 O6 C([C@@H]1[....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 3VGM - BGC C6 H12 O6 C([C@@H]1[....
2 3VGL - BGC C6 H12 O6 C([C@@H]1[....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3VGM - BGC C6 H12 O6 C([C@@H]1[....
2 3VGL - BGC C6 H12 O6 C([C@@H]1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ANP; Similar ligands found: 373
No: Ligand ECFP6 Tc MDL keys Tc
1 ANP 1 1
2 A2D 0.810811 0.945205
3 B4P 0.802632 0.945205
4 AP5 0.802632 0.945205
5 ADP 0.802632 0.972222
6 BA3 0.789474 0.945205
7 AU1 0.782051 1
8 HEJ 0.772152 0.972222
9 ATP 0.772152 0.972222
10 AT4 0.769231 0.933333
11 AN2 0.769231 0.986111
12 5FA 0.7625 0.972222
13 AQP 0.7625 0.972222
14 M33 0.759494 0.932432
15 MAP 0.752941 0.972973
16 ACP 0.75 0.945946
17 AR6 0.740741 0.945205
18 APR 0.740741 0.945205
19 ACQ 0.73494 0.945946
20 AD9 0.731707 0.945946
21 SAP 0.731707 0.921053
22 AGS 0.731707 0.921053
23 A 0.723684 0.944444
24 AMP 0.723684 0.944444
25 ATF 0.717647 0.933333
26 ADX 0.716049 0.851852
27 CA0 0.716049 0.92
28 6YZ 0.709302 0.945946
29 50T 0.707317 0.932432
30 PRX 0.698795 0.87013
31 ABM 0.696203 0.893333
32 AP2 0.679012 0.933333
33 A12 0.679012 0.933333
34 APC 0.678571 0.933333
35 T99 0.674419 0.933333
36 TAT 0.674419 0.933333
37 A22 0.674157 0.958904
38 SRA 0.670886 0.894737
39 SRP 0.670455 0.883117
40 5AL 0.666667 0.906667
41 A1R 0.659341 0.884615
42 ADQ 0.659341 0.92
43 A3R 0.659341 0.884615
44 3OD 0.648936 0.92
45 BIS 0.648936 0.909091
46 5SV 0.648352 0.82716
47 9X8 0.645161 0.896104
48 OAD 0.645161 0.92
49 25L 0.642105 0.958904
50 AMO 0.641304 0.907895
51 G5P 0.636364 0.897436
52 DLL 0.634409 0.906667
53 AHX 0.634409 0.897436
54 00A 0.634409 0.860759
55 ADV 0.632184 0.907895
56 RBY 0.632184 0.907895
57 ADP PO3 0.632184 0.917808
58 NB8 0.631579 0.897436
59 25A 0.630435 0.945205
60 OOB 0.630435 0.906667
61 8QN 0.630435 0.906667
62 G3A 0.626263 0.897436
63 4AD 0.623656 0.896104
64 PAJ 0.623656 0.8625
65 LAD 0.621053 0.839506
66 TXA 0.614583 0.907895
67 1ZZ 0.614583 0.819277
68 ME8 0.614583 0.819277
69 GTA 0.613861 0.864198
70 9ZD 0.612903 0.909091
71 9ZA 0.612903 0.909091
72 3UK 0.610526 0.894737
73 SON 0.604651 0.907895
74 ADP ALF 0.604396 0.848101
75 ALF ADP 0.604396 0.848101
76 PR8 0.604167 0.829268
77 B5V 0.604167 0.883117
78 WAQ 0.604167 0.860759
79 4UV 0.6 0.871795
80 GAP 0.6 0.87013
81 PTJ 0.597938 0.873418
82 FYA 0.597938 0.881579
83 VO4 ADP 0.597826 0.906667
84 ADP VO4 0.597826 0.906667
85 LMS 0.597561 0.829268
86 UP5 0.596154 0.896104
87 FA5 0.59596 0.883117
88 YAP 0.59596 0.871795
89 PAP 0.595506 0.958333
90 A4P 0.59434 0.823529
91 XAH 0.59 0.841463
92 4UU 0.588235 0.871795
93 AFH 0.588235 0.8625
94 9SN 0.585859 0.85
95 2A5 0.58427 0.894737
96 T5A 0.583333 0.821429
97 DQV 0.582524 0.932432
98 NAI 0.580952 0.884615
99 B5M 0.58 0.871795
100 B5Y 0.58 0.871795
101 ITT 0.579545 0.917808
102 ATR 0.577778 0.944444
103 OMR 0.575472 0.831325
104 5AS 0.574713 0.781609
105 YLP 0.571429 0.8
106 48N 0.571429 0.873418
107 AP0 0.570093 0.873418
108 4TC 0.570093 0.873418
109 7D3 0.569767 0.881579
110 ADJ 0.568807 0.831325
111 GNP 0.568421 0.922078
112 9GM 0.568421 0.922078
113 DAL AMP 0.568421 0.881579
114 6V0 0.566038 0.873418
115 TXD 0.566038 0.884615
116 DND 0.566038 0.907895
117 NAX 0.566038 0.851852
118 4UW 0.566038 0.839506
119 NXX 0.566038 0.907895
120 XYA 0.565789 0.821918
121 RAB 0.565789 0.821918
122 ADN 0.565789 0.821918
123 AOC 0.564706 0.8
124 7D4 0.561798 0.881579
125 ADP BMA 0.561224 0.894737
126 TXE 0.560748 0.884615
127 TYM 0.560748 0.883117
128 GA7 0.557692 0.883117
129 YLC 0.555556 0.819277
130 YLB 0.555556 0.8
131 139 0.554545 0.851852
132 5N5 0.551282 0.797297
133 JB6 0.55 0.860759
134 LAQ 0.54717 0.819277
135 F2R 0.544643 0.843373
136 MYR AMP 0.544554 0.797619
137 5CD 0.544304 0.783784
138 A4D 0.544304 0.797297
139 80F 0.54386 0.821429
140 7MD 0.542857 0.864198
141 6AD 0.542553 0.886076
142 A2R 0.541667 0.958904
143 UPA 0.541284 0.884615
144 YLA 0.540541 0.8
145 A A 0.54 0.918919
146 BTX 0.539823 0.821429
147 COD 0.539823 0.793103
148 HFD 0.537634 0.921053
149 G5A 0.537634 0.781609
150 3DH 0.535714 0.753247
151 AYB 0.535714 0.790698
152 CNA 0.535714 0.907895
153 BT5 0.535088 0.811765
154 ATP A A A 0.533981 0.905405
155 IOT 0.531532 0.811765
156 MTA 0.53012 0.753247
157 3AM 0.529412 0.90411
158 A3P 0.52809 0.944444
159 PPS 0.526316 0.851852
160 NAD 0.526316 0.906667
161 EP4 0.52439 0.734177
162 7D5 0.52381 0.855263
163 AMP DBH 0.52381 0.87013
164 J7C 0.522727 0.75
165 A5A 0.520833 0.809524
166 EAD 0.520661 0.851852
167 TSB 0.520408 0.821429
168 AHZ 0.518519 0.797619
169 DTA 0.518072 0.766234
170 M2T 0.518072 0.716049
171 A3D 0.517241 0.894737
172 6RE 0.517241 0.740741
173 YLY 0.516949 0.790698
174 SSA 0.515464 0.802326
175 NA7 0.514852 0.933333
176 ARG AMP 0.514019 0.809524
177 AR6 AR6 0.514019 0.893333
178 7MC 0.513514 0.843373
179 A2P 0.511111 0.930556
180 52H 0.510204 0.781609
181 VMS 0.510204 0.790698
182 54H 0.510204 0.790698
183 TYR AMP 0.509434 0.848101
184 TAD 0.509259 0.8625
185 NAQ 0.508333 0.85
186 A3N 0.505618 0.766234
187 AV2 0.505155 0.893333
188 53H 0.50505 0.781609
189 5CA 0.50505 0.802326
190 8X1 0.50505 0.755556
191 ARU 0.504951 0.839506
192 ZID 0.504132 0.894737
193 P1H 0.504 0.831325
194 NAE 0.5 0.871795
195 3AT 0.5 0.945205
196 AVV 0.5 0.873418
197 P5A 0.495146 0.747253
198 NSS 0.49505 0.802326
199 LSS 0.49505 0.764045
200 DSZ 0.49505 0.802326
201 N0B 0.491803 0.8
202 AF3 ADP 3PG 0.491071 0.817073
203 NVA LMS 0.490196 0.755556
204 DAT 0.489362 0.881579
205 IMO 0.488889 0.90411
206 ZAS 0.488636 0.792208
207 FDA 0.488372 0.813953
208 NAJ PZO 0.487395 0.85
209 4TA 0.487179 0.788235
210 LPA AMP 0.486486 0.797619
211 LEU LMS 0.485437 0.755556
212 DTP 0.484536 0.881579
213 V3L 0.484536 0.945205
214 S4M 0.483516 0.651685
215 GJV 0.483516 0.731707
216 DZD 0.483051 0.8625
217 2AM 0.482759 0.917808
218 5AD 0.481013 0.726027
219 GSU 0.480769 0.781609
220 KAA 0.480769 0.755556
221 NDE 0.480315 0.907895
222 M24 0.479339 0.851852
223 MAO 0.478261 0.761905
224 NEC 0.477778 0.727273
225 DSH 0.477778 0.707317
226 FAS 0.477273 0.831325
227 FAD 0.477273 0.831325
228 RGT 0.476636 0.933333
229 9K8 0.47619 0.698925
230 G A A A 0.474576 0.85
231 0WD 0.474576 0.897436
232 FNK 0.474074 0.786517
233 5X8 0.473684 0.74359
234 6FA 0.473282 0.821429
235 NDC 0.472868 0.85
236 FB0 0.472868 0.786517
237 YSA 0.472222 0.781609
238 7DD 0.468085 0.958333
239 OVE 0.466667 0.881579
240 MHZ 0.463158 0.701149
241 8PZ 0.462963 0.802326
242 A G 0.462185 0.860759
243 AMP NAD 0.462185 0.881579
244 A3G 0.461538 0.779221
245 NAJ PYZ 0.459677 0.809524
246 6C6 0.459184 0.858974
247 SFG 0.458333 0.730769
248 U A G G 0.458333 0.860759
249 7D7 0.45679 0.723684
250 128 0.45614 0.8
251 SFD 0.455224 0.736842
252 6IA 0.454545 0.817073
253 DDS 0.454545 0.855263
254 GDP 0.454545 0.896104
255 ODP 0.453782 0.886076
256 NJP 0.453782 0.921053
257 7DT 0.453608 0.958333
258 A7D 0.452632 0.75641
259 Z5A 0.452381 0.802326
260 WSA 0.452174 0.790698
261 U A 0.45082 0.884615
262 7C5 0.45045 0.797468
263 FAY 0.449275 0.841463
264 NDP 0.449153 0.897436
265 SA8 0.44898 0.690476
266 A5D 0.44898 0.766234
267 71V 0.446809 0.884615
268 GGZ 0.446602 0.804878
269 RFL 0.446043 0.802326
270 2SA 0.445545 0.907895
271 SAI 0.444444 0.716049
272 GP3 0.444444 0.897436
273 SAH 0.444444 0.725
274 PO4 PO4 A A A A PO4 0.443396 0.878378
275 A A A 0.443396 0.881579
276 4YB 0.442478 0.764045
277 SMM 0.441176 0.670455
278 S7M 0.441176 0.674419
279 GTP 0.441176 0.896104
280 Y3J 0.440476 0.706667
281 SAM 0.44 0.674419
282 649 0.439655 0.747253
283 12D 0.438596 0.809524
284 A3S 0.4375 0.789474
285 NPW 0.436975 0.864198
286 GCP 0.436893 0.873418
287 AAT 0.435644 0.690476
288 GNH 0.435644 0.909091
289 EEM 0.435644 0.674419
290 ETB 0.435484 0.813953
291 DCA 0.435484 0.804598
292 N6P 0.433962 0.890411
293 NZQ 0.433333 0.886076
294 TXP 0.433333 0.897436
295 PGS 0.43299 0.860759
296 APU 0.432203 0.871795
297 PUA 0.432 0.8625
298 62F 0.431655 0.841463
299 F2N 0.431507 0.795455
300 DA 0.430108 0.855263
301 D5M 0.430108 0.855263
302 J7V 0.429688 0.813953
303 NIA 0.428571 0.848101
304 COA 0.428571 0.804598
305 6K6 0.428571 0.905405
306 A3T 0.428571 0.8
307 0T1 0.428571 0.804598
308 P5F 0.427586 0.804598
309 AAM 0.425532 0.944444
310 0UM 0.424528 0.682353
311 8Q2 0.423729 0.775281
312 G1R 0.423077 0.884615
313 AMZ 0.422222 0.891892
314 C2R 0.422222 0.88
315 A U 0.420168 0.848101
316 IDP 0.42 0.894737
317 GSP 0.419048 0.851852
318 30N 0.418605 0.736842
319 CAO 0.418605 0.777778
320 DG1 0.418605 0.897436
321 1DG 0.418605 0.897436
322 COS 0.418605 0.786517
323 AMX 0.418605 0.813953
324 TM1 0.418182 0.797619
325 A6D 0.416667 0.746988
326 K15 0.416667 0.666667
327 V1N 0.415929 0.893333
328 CMX 0.415385 0.804598
329 SCO 0.415385 0.804598
330 GEK 0.415094 0.719512
331 XNP 0.414634 0.851852
332 NHD 0.414634 0.881579
333 9JJ 0.413793 0.841463
334 AIR 0.413793 0.876712
335 COK 0.413534 0.786517
336 G2R 0.412844 0.8625
337 ACO 0.412214 0.777778
338 FAM 0.412214 0.786517
339 FCX 0.412214 0.777778
340 NAP 0.410853 0.92
341 FA9 0.409396 0.843373
342 SXZ 0.409091 0.694118
343 HAX 0.409091 0.806818
344 TAP 0.407692 0.884615
345 2MC 0.407407 0.752688
346 62X 0.407407 0.651685
347 GKE 0.40708 0.8625
348 GDC 0.40708 0.8625
349 GDD 0.40708 0.8625
350 3KK 0.406015 0.786517
351 FYN 0.406015 0.804598
352 NVA 2AD 0.405941 0.740741
353 NA0 0.40458 0.907895
354 101 0.404255 0.855263
355 G 0.40404 0.883117
356 5GP 0.40404 0.883117
357 HDV 0.403846 0.87013
358 MGP 0.403846 0.8625
359 OXK 0.402985 0.786517
360 MCD 0.402985 0.786517
361 CA6 0.402985 0.714286
362 SOP 0.402985 0.786517
363 3AD 0.402299 0.783784
364 S8M 0.401869 0.78481
365 YE1 0.40146 0.795455
366 NMX 0.4 0.782609
367 7RP 0.4 0.902778
368 2VA 0.4 0.779221
369 1VU 0.4 0.777778
370 CO6 0.4 0.786517
371 CMC 0.4 0.786517
372 6G0 0.4 0.8625
373 GMV 0.4 0.873418
Ligand no: 2; Ligand: BGC; Similar ligands found: 142
No: Ligand ECFP6 Tc MDL keys Tc
1 WOO 1 1
2 GLC 1 1
3 BGC 1 1
4 ALL 1 1
5 BMA 1 1
6 GXL 1 1
7 GIV 1 1
8 GAL 1 1
9 MAN 1 1
10 GLA 1 1
11 Z6J 0.653846 0.866667
12 32O 0.653846 0.866667
13 RIB 0.653846 0.866667
14 FUB 0.653846 0.866667
15 AHR 0.653846 0.866667
16 MLB 0.511628 0.848485
17 GLC GLC 0.511628 0.848485
18 BGC GLC 0.511628 0.848485
19 BGC GLA 0.511628 0.848485
20 GLA BMA 0.511628 0.848485
21 MAN BMA 0.511628 0.848485
22 BMA GLA 0.511628 0.848485
23 GLA BGC 0.511628 0.848485
24 MAN MAN 0.511628 0.848485
25 GLA GLC 0.511628 0.848485
26 BMA MAN 0.511628 0.848485
27 GAL GLC 0.511628 0.848485
28 GAL GAL 0.511628 0.848485
29 LAK 0.511628 0.848485
30 GLC BGC 0.511628 0.848485
31 YDR 0.5 0.8
32 GLC GLC GLC GLC BGC 0.488889 0.848485
33 GLC GLC GLC 0.488889 0.848485
34 MAN MAN MAN 0.488889 0.848485
35 BMA MAN MAN 0.488889 0.848485
36 GLC GLC GLC GLC GLC BGC 0.488889 0.848485
37 EMZ 0.472222 0.794118
38 BG6 0.461538 0.675
39 BGP 0.461538 0.675
40 G6P 0.461538 0.675
41 M6P 0.461538 0.675
42 M6D 0.461538 0.675
43 A6P 0.461538 0.675
44 GAF 0.457143 0.875
45 SHG 0.457143 0.875
46 2FG 0.457143 0.875
47 G2F 0.457143 0.875
48 2H5 0.457143 0.875
49 GCS 0.457143 0.777778
50 1GN 0.457143 0.777778
51 X6X 0.457143 0.777778
52 PA1 0.457143 0.777778
53 95Z 0.457143 0.777778
54 G3F 0.457143 0.875
55 NGR 0.454545 0.848485
56 MAL 0.454545 0.848485
57 MAN GLC 0.454545 0.848485
58 GAL BGC 0.454545 0.848485
59 GLA GLA 0.454545 0.848485
60 BGC BMA 0.454545 0.848485
61 M3M 0.454545 0.848485
62 GLA GAL 0.454545 0.848485
63 MAB 0.454545 0.848485
64 GLC GAL 0.454545 0.848485
65 B2G 0.454545 0.848485
66 LBT 0.454545 0.848485
67 BMA GAL 0.454545 0.848485
68 LAT 0.454545 0.848485
69 BGC GAL 0.454545 0.848485
70 CBI 0.454545 0.848485
71 CBK 0.454545 0.848485
72 N9S 0.454545 0.848485
73 LB2 0.454545 0.848485
74 3MG 0.444444 0.875
75 TCB 0.444444 0.8
76 GLC SGC 0.444444 0.8
77 YIO 0.441176 0.870968
78 2GS 0.432432 0.875
79 2M4 0.431818 0.848485
80 AHR AHR 0.428571 0.764706
81 GLF 0.428571 0.84375
82 FUB AHR 0.428571 0.764706
83 MAN BMA BMA 0.416667 0.848485
84 BMA MAN BMA 0.416667 0.848485
85 CTR 0.416667 0.848485
86 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.416667 0.848485
87 GLA GAL BGC 0.416667 0.848485
88 CE5 0.416667 0.848485
89 MLR 0.416667 0.848485
90 CE6 0.416667 0.848485
91 MT7 0.416667 0.848485
92 BMA BMA BMA 0.416667 0.848485
93 GLC BGC BGC BGC BGC 0.416667 0.848485
94 MAN MAN BMA BMA BMA BMA 0.416667 0.848485
95 BGC BGC BGC BGC BGC 0.416667 0.848485
96 BGC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
97 BGC GLC GLC 0.416667 0.848485
98 BMA BMA BMA BMA BMA 0.416667 0.848485
99 MAN BMA BMA BMA BMA 0.416667 0.848485
100 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
101 GLC BGC BGC BGC BGC BGC 0.416667 0.848485
102 MAN BMA BMA BMA BMA BMA 0.416667 0.848485
103 BGC BGC BGC BGC BGC BGC 0.416667 0.848485
104 BGC GLC GLC GLC 0.416667 0.848485
105 BGC BGC BGC GLC 0.416667 0.848485
106 CTT 0.416667 0.848485
107 GLA GAL GLC 0.416667 0.848485
108 MTT 0.416667 0.848485
109 GLC BGC BGC BGC 0.416667 0.848485
110 GLC GLC BGC 0.416667 0.848485
111 CEY 0.416667 0.848485
112 B4G 0.416667 0.848485
113 CE8 0.416667 0.848485
114 BMA BMA BMA BMA BMA BMA 0.416667 0.848485
115 GAL FUC 0.416667 0.848485
116 DXI 0.416667 0.848485
117 GLC BGC GLC 0.416667 0.848485
118 CT3 0.416667 0.848485
119 GAL GAL GAL 0.416667 0.848485
120 GLC GLC GLC GLC GLC 0.416667 0.848485
121 BGC BGC BGC BGC 0.416667 0.848485
122 BGC BGC BGC 0.416667 0.848485
123 BGC BGC GLC 0.416667 0.848485
124 CEX 0.416667 0.848485
125 GLC GAL GAL 0.416667 0.848485
126 BGC GLC GLC GLC GLC 0.416667 0.848485
127 GLC BGC BGC 0.416667 0.848485
128 GS1 GLC GS1 0.408163 0.8
129 SGC SGC BGC 0.408163 0.8
130 BGC BGC BGC GLC BGC BGC 0.408163 0.848485
131 GLC BGC BGC BGC BGC BGC BGC 0.408163 0.848485
132 1LL 0.405405 0.771429
133 TDG 0.405405 0.771429
134 TRE 0.405405 0.848485
135 NDG 0.404762 0.7
136 NGA 0.404762 0.7
137 NAG 0.404762 0.7
138 HSQ 0.404762 0.7
139 A2G 0.404762 0.7
140 BM3 0.404762 0.7
141 FUB AHR AHR 0.4 0.764706
142 AHR AHR AHR AHR AHR AHR 0.4 0.764706
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3VGL; Ligand: BGC; Similar sites found with APoc: 107
This union binding pocket(no: 1) in the query (biounit: 3vgl.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 1LQA NDP 1.55763
2 4DQ2 BTX 1.86916
3 5FJN FAD 1.86916
4 5FJN BE2 1.86916
5 1U8V FAD 1.86916
6 5Z21 NAI 1.86916
7 3KB6 NAD 1.86916
8 1CER NAD 2.18069
9 3ZV6 NAD 2.4911
10 4QS9 BGC 2.49221
11 2BGM NAJ 2.51799
12 5N6C NAD 2.66667
13 6CUZ FEV 2.80374
14 6AMI TRP 2.80374
15 1FEC FAD 2.80374
16 1Y3A GDP 2.80374
17 1ZXM ANP 2.80374
18 2OM2 GDP 2.80374
19 1RP0 AHZ 2.8169
20 1YQD NAP 3.00546
21 3O8M GLC 3.11526
22 3O8M BGC 3.11526
23 3BAZ NAP 3.11526
24 5OC1 FAD 3.11526
25 1V35 NAI 3.11526
26 4JNA FAD 3.11526
27 1HXD BTN 3.11526
28 4BVA T3 3.11526
29 4Y7E BMA BMA BMA 3.11526
30 2DXU BT5 3.40426
31 1WPY BTN 3.40426
32 1CZA GLC 3.42679
33 2GAG FOA 3.42679
34 2UUU FAD 3.42679
35 2ZXI FAD 3.42679
36 3EFS BTN 3.43348
37 1MO9 KPC 3.73832
38 1MO9 FAD 3.73832
39 2O4C NAD 3.73832
40 3QDK QDK 3.73832
41 5HSA FAS 3.73832
42 6F7L FAD 3.73832
43 5L4S NAP 3.77358
44 5L4S 6KX 3.77358
45 3ZXR P3S 4.04984
46 3ZXR IQ1 4.04984
47 5Z2L NDP 4.08163
48 1NAA ABL 4.36137
49 1NAA 6FA 4.36137
50 5A1S FLC 4.36137
51 3BXD INS 4.49827
52 1NE7 AGP 4.49827
53 5EZ7 FAD 4.6729
54 1D4D FAD 4.6729
55 4MIG G3F 4.6729
56 2D0O ADP 5.29595
57 2C91 NAP 5.29595
58 4ZGS NAD 5.60748
59 5J60 FAD 5.625
60 2J9D ADP 5.88235
61 2QZS 250 5.919
62 2QZS ADP 5.919
63 2QZS GLC 5.919
64 5I39 FAD 5.919
65 1OD3 BGC BGC 5.95238
66 3POT TP7 6.0241
67 3POT COM 6.0241
68 3POT TXZ 6.0241
69 1GPE FAD 6.23053
70 3CTY FAD 6.26959
71 6BYF CIT 6.47059
72 1VQW FAD 6.54206
73 2CH5 NAG 6.54206
74 2CH5 NDG 6.54206
75 4XTX 590 6.66667
76 4UTG ANP 6.85358
77 4AT0 FAD 6.85358
78 5Y6Q MCN 6.85358
79 5N1Q TP7 6.89655
80 4JTA NAP 6.90691
81 1EXB NDP 6.92771
82 2KIN ADP 7
83 1FS5 TLA 7.14286
84 3EAU PDN 7.16511
85 3EAU NDP 7.16511
86 3NYC IAR 7.78816
87 3NYC FAD 7.78816
88 5Z20 NAI 7.78816
89 5L3R GCP 7.78816
90 2W83 GTP 7.79221
91 5TCI MLI 8.29268
92 5A8R TP7 8.67924
93 1UY4 XYP XYP XYP XYP 8.96552
94 6C2Z P1T 10.9034
95 1CX9 NHP 11.838
96 5ODQ 9SB 12.8571
97 4HA6 FAD 13.0841
98 2F5Z FAD 13.0841
99 1HKU NAD 13.3956
100 1FQK GDP 14.3302
101 1FQJ GDP 14.3302
102 4USI ATP 14.9351
103 2RI1 GLP 15.3191
104 2V4V XYP 17.8295
105 5F7R GLC GLC 36.7601
106 3LM9 FRU 47.0199
107 1WOQ BGC 48.6891
Pocket No.: 2; Query (leader) PDB : 3VGL; Ligand: BGC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3vgl.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 3VGL; Ligand: BGC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 3vgl.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 3VGL; Ligand: BGC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 3vgl.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 3VGL; Ligand: ANP; Similar sites found with APoc: 206
This union binding pocket(no: 5) in the query (biounit: 3vgl.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 1Q8P MAN MMA 1.19048
2 2PHR MAN MAN BMA MAN 1.19048
3 1RSG FAD 1.24611
4 1YY5 FAD 1.24611
5 6F5W KG1 1.86916
6 4EFH ADP 1.86916
7 3MN9 ATP 1.86916
8 3MN7 ATP 1.86916
9 3MN6 ATP 1.86916
10 4MO4 ACP 1.86916
11 4RW3 SHV 1.98676
12 2BL9 NDP 2.10084
13 2YCH ATP 2.18069
14 6G28 AR6 2.18069
15 4IV9 FAD 2.18069
16 2VVM FAD 2.18069
17 3ITJ FAD 2.18069
18 2Z3Y F2N 2.18069
19 3ZL8 ADP 2.18069
20 1TDF FAD 2.21519
21 1TDF NAP 2.21519
22 1OVD ORO 2.2508
23 1OVD FMN 2.2508
24 1EP2 ORO 2.29885
25 1EP2 FMN 2.29885
26 4BR5 ANP 2.407
27 3BF1 ADP 2.40964
28 6B3V ANP 2.49221
29 6B3V 7DQ 2.49221
30 4A2A ATP 2.49221
31 4A2B AGS 2.49221
32 3QFU ADP 2.49221
33 5TWB FAD 2.49221
34 1AOE NDP 2.60417
35 1AOE GW3 2.60417
36 3PA8 621 2.75591
37 5LJW ANP 2.80374
38 5WKC FAD 2.80374
39 2QXL ATP 3.11526
40 3TDC 0EU 3.11526
41 4ORM 2V6 3.11526
42 4ORM ORO 3.11526
43 4ORM FMN 3.11526
44 4B9Q ATP 3.11526
45 4OOE FOM 3.11526
46 4OOE NDP 3.11526
47 5FPE 3TR 3.11526
48 4BGB ADP 3.11526
49 4Z24 FAD 3.11526
50 6F97 FAD 3.11526
51 5GQX GLC GLC GLC 3.11526
52 2UYT LRH 3.11526
53 2UYT ADP 3.11526
54 5G41 AP5 3.13901
55 5IFK HPA 3.20513
56 1HYH NAD 3.23625
57 5LX9 OLB 3.25733
58 4DE3 DN8 3.42205
59 3WQT ANP 3.42679
60 4ZLU 4PW 3.42679
61 2BUP ADP 3.42679
62 2BUP ATP 3.42679
63 4ZLU ADP 3.42679
64 5VE5 GSH 3.42679
65 4JNE ATP 3.42679
66 1UWK URO 3.42679
67 1UWK NAD 3.42679
68 2V7Y ADP 3.42679
69 4JX1 CAH 3.53982
70 1RRC ADP 3.65448
71 5OBY ANP 3.73832
72 5OBU ANP 3.73832
73 4WZH FMN 3.73832
74 5JCA FAD 3.73832
75 4UP3 FAD 3.82166
76 2JB2 PHE 3.88548
77 2JB2 FAD 3.88548
78 3EEL 53T 3.96476
79 5U7W ADE 3.99061
80 4M52 M52 4.04984
81 3KJS NAP 4.04984
82 3KJS DQ1 4.04984
83 3OIX FMN 4.04984
84 5MBX FAD 4.04984
85 5MBX SP5 4.04984
86 3QH2 3NM 4.0724
87 5Z2L NDP 4.08163
88 1TL2 NDG 4.23729
89 4HXY NDP 4.3379
90 4EHU ANP 4.34783
91 5EOU ATP 4.36137
92 2F9W PAU 4.42804
93 2IVN ANP 4.54545
94 3B6C SDN 4.6729
95 3GGO NAI 4.77707
96 3GGO ENO 4.77707
97 4CZG QH3 4.98442
98 4CZG ADP 4.98442
99 3C3N FMN 4.98442
100 5YB7 FAD 4.98442
101 6BR8 6OU 5.15873
102 2D0O ADP 5.29595
103 6CB2 OLC 5.29595
104 5HV7 RBL 5.29595
105 1OFS SUC 5.29595
106 2BQP GLC 5.29595
107 1U70 MTX 5.37634
108 1U70 NDP 5.37634
109 3RG9 WRA 5.41667
110 3RG9 NDP 5.41667
111 1NVM NAD 5.44872
112 3CIP ATP 5.46875
113 4CBX ATP 5.51181
114 4CBU ATP 5.51181
115 1YAG ATP 5.6
116 6EOF ADP 5.60748
117 4GNI ATP 5.60748
118 5XFV FMN 5.60748
119 1X87 NAD 5.60748
120 3U4L ATP 5.71429
121 1U72 NDP 5.91398
122 1U72 MTX 5.91398
123 6ASY ATP 5.919
124 6G3R ADP 5.919
125 5AR0 GB8 5.919
126 2IVD FAD 5.919
127 5EXW 7DT 6
128 2W41 ADP 6.23053
129 5HTX ADP 6.54206
130 3NKS FAD 6.85358
131 5E70 RCD 7.16511
132 1F0X FAD 7.16511
133 6BKA FMN 7.47664
134 5F7J ADE 7.5
135 4TQK NAG 7.78816
136 4YDU ADP 8.16327
137 3FC4 EDO 8.41121
138 4NAE 1GP 8.44444
139 2FXU ATP 8.72274
140 3SJH LAR 8.72274
141 5YEE ATP 8.72274
142 1KXP ATP 8.72274
143 4B1V LAB 8.72274
144 4B1V ATP 8.72274
145 4H03 ATP 8.72274
146 4H03 LAR 8.72274
147 1SQK ADP 8.72274
148 5ZZB ATP 8.72274
149 2FF6 ATP 8.72274
150 5YPU ATP 8.72274
151 3SJH ATP 8.72274
152 4PKI ATP 8.72274
153 4PKG ATP 8.72274
154 3MN5 ATP 8.72274
155 2V51 ATP 8.72274
156 4B1W ATP 8.72274
157 2Q97 ATP 8.72274
158 4Z94 ATP 8.72274
159 2Z9V PXM 8.72274
160 3MJY IJZ 9.03427
161 3MJY FMN 9.03427
162 4A59 AMP 9.03427
163 1M2Z BOG 9.33852
164 5ZZA ATP 9.91736
165 3HRD FAD 10
166 2BTO GTP 10.1852
167 5JIC N7E 10.2804
168 3Q9T FAY 10.2804
169 5JIC ADP 10.2804
170 1TUU ADP 10.5919
171 1TUU AMP 10.5919
172 2ZGY GDP 10.625
173 4A62 ANP 10.625
174 2FYF PLP 10.9034
175 2ANM CDO 11.1111
176 4JLS 3ZE 11.1842
177 2QWO ADP 11.5265
178 3LDQ 3P1 11.5265
179 2WQ4 SFU 11.5385
180 5LY3 ADP 12.4611
181 1J3I NDP 12.8049
182 1J3I WRA 12.8049
183 2F5Z FAD 13.0841
184 3RYC GTP 14.3302
185 5EYP GDP 14.3302
186 4USI AKG 14.9351
187 2A40 ATP 15
188 2A3Z ATP 15
189 2A42 ATP 15
190 2PBD ATP 16.2791
191 2E2P ADP 16.388
192 1XXA ARG 16.6667
193 4HSU FAD 16.9355
194 3U9Z ADP 17.2414
195 4U8P UDP 17.4455
196 4U8P FDA 17.4455
197 1YRO UDP 17.8862
198 5L2Z 70C 18.9655
199 4B1X ATP 21.875
200 4PL8 ATP 21.9178
201 4OGQ 7PH 29.7297
202 2D1K ATP 31.25
203 2FF3 ATP 33.3333
204 2PAV ATP 43.75
205 3LM9 ADP 47.0199
206 3LM9 FRU 47.0199
Pocket No.: 6; Query (leader) PDB : 3VGL; Ligand: ANP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 3vgl.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 3VGL; Ligand: ANP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 3vgl.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 3VGL; Ligand: ANP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 3vgl.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
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