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Receptor
PDB id Resolution Class Description Source Keywords
3RWO 1.7 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF YPT32 IN COMPLEX WITH GDP SACCHAROMYCES CEREVISIAE GTPASES PROTEIN-GDP COMPLEX EXOCYTOSIS GOLGI APPARATUS GBINDING LIPOPROTEIN MEMBRANE NUCLEOTIDE-BINDING PRENYLAPROTEIN TRANSPORT TRANSPORT YPT32 RAB GTPASE GDP VESICTRAFFICKING MYO2P EFFECTORS
Ref.: THE ACTIVATION CYCLE OF RAB GTPASE YPT32 REVEALS ST DETERMINANTS OF EFFECTOR RECRUITMENT AND GDI BINDIN FEBS LETT. V. 585 3520 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GDP A:4032;
B:4032;
Valid;
Valid;
none;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
MG A:1175;
B:1176;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3RWO 1.7 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF YPT32 IN COMPLEX WITH GDP SACCHAROMYCES CEREVISIAE GTPASES PROTEIN-GDP COMPLEX EXOCYTOSIS GOLGI APPARATUS GBINDING LIPOPROTEIN MEMBRANE NUCLEOTIDE-BINDING PRENYLAPROTEIN TRANSPORT TRANSPORT YPT32 RAB GTPASE GDP VESICTRAFFICKING MYO2P EFFECTORS
Ref.: THE ACTIVATION CYCLE OF RAB GTPASE YPT32 REVEALS ST DETERMINANTS OF EFFECTOR RECRUITMENT AND GDI BINDIN FEBS LETT. V. 585 3520 2011
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (15)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 175 families.
1 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
6 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
12 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
14 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
15 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (274)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKR - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
18 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
22 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 6ARK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 5VPZ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
27 6F76 - CVK C24 H26 N2 O3 CN(C)Cc1cc....
28 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
29 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
31 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
32 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5OCO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
34 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
36 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 5VP7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
38 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
40 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
41 5VBM - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
43 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
45 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
47 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
49 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
54 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
55 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
57 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
58 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
59 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
61 5VQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
62 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
64 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5VPY - 9GM C10 H17 N6 O13 P3 c1nc2c(n1[....
67 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
68 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
71 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 5VQ6 - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
73 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
78 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
81 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 5UK9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
84 6ASE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
85 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
86 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
87 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
88 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
90 5VQ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
91 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
92 5VPI - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
93 5W22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
94 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
96 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
97 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
98 6BP1 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
99 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
101 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
102 5VBZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
104 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
107 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
108 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
109 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
112 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
113 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
114 5VQ8 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 6B0Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
117 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
118 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
119 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
123 5OCT - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
124 5VBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
126 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
127 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
128 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
130 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
133 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
134 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
135 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
138 6B0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
140 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
141 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
142 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
143 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
144 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
145 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
147 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
150 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
151 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
152 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
153 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
154 5VQ2 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
155 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
156 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
157 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
158 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 5WHD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
163 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
164 5V9U - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
165 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
168 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
170 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
171 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
172 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
174 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
175 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
178 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
179 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
181 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
183 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
185 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
186 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
187 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
188 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
189 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
190 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
191 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
192 1N6K - GDP AF3 n/a n/a
193 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
194 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
197 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
201 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
203 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
207 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
208 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
209 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
210 5OCG - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
211 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
214 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
215 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
216 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
221 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
225 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
227 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
228 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
229 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
230 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
231 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
232 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
234 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
235 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
236 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
237 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
238 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
239 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
241 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
242 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
243 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
244 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
245 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
247 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
248 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
249 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
250 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
251 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
252 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
253 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
254 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
255 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
256 5A0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
257 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
258 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
259 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
260 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
261 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
262 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
263 5XC5 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
264 5XC3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
265 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
266 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
267 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
268 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
269 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
270 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
271 6BSX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
272 5YXH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
273 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
274 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 161
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 9GM 0.839506 0.973684
6 GNP 0.839506 0.973684
7 G 0.828947 0.986486
8 5GP 0.828947 0.986486
9 G1R 0.82716 0.986667
10 GCP 0.82716 0.973684
11 GSP 0.817073 0.948718
12 GAV 0.797619 0.961039
13 GMV 0.792683 0.973684
14 G2P 0.77381 0.961039
15 G2R 0.770115 0.961039
16 GP2 0.756098 0.961039
17 GDC 0.747253 0.961039
18 GKE 0.747253 0.961039
19 GDD 0.747253 0.961039
20 GPG 0.741573 0.961039
21 G3D 0.732558 0.986486
22 ALF 5GP 0.729412 0.888889
23 Y9Z 0.728261 0.902439
24 G5P 0.723404 0.973684
25 GFB 0.72043 0.961039
26 GTG 0.72043 0.936709
27 GDR 0.72043 0.961039
28 G4P 0.715909 0.986486
29 G3A 0.712766 0.973684
30 6CK 0.712766 0.936709
31 GDP AF3 0.7 0.888889
32 ALF GDP 0.7 0.888889
33 GDP ALF 0.7 0.888889
34 YGP 0.698925 0.901235
35 GKD 0.697917 0.961039
36 JB2 0.697917 0.961039
37 GDX 0.690722 0.973684
38 GPD 0.690722 0.925
39 GMP 0.684211 0.88
40 0O2 0.666667 0.986486
41 JB3 0.656863 0.948718
42 NGD 0.650485 0.961039
43 DGI 0.636364 0.923077
44 GDP 7MG 0.636364 0.911392
45 U2G 0.634615 0.936709
46 GPX 0.634409 0.946667
47 G G 0.632653 0.948052
48 IDP 0.632184 0.972973
49 2MD 0.632075 0.891566
50 CAG 0.62963 0.880952
51 CG2 0.622642 0.936709
52 FEG 0.619048 0.879518
53 MGD 0.614679 0.891566
54 ZGP 0.613208 0.869048
55 GH3 0.612903 0.973333
56 3GP 0.611765 0.946667
57 MD1 0.607143 0.891566
58 PGD 0.59292 0.925
59 DGT 0.591398 0.923077
60 BGO 0.588785 0.924051
61 TPG 0.582609 0.840909
62 DBG 0.582609 0.948718
63 2GP 0.574713 0.96
64 FE9 0.570175 0.776596
65 GCP G 0.56 0.921053
66 A G 0.553571 0.935065
67 G A A A 0.553571 0.923077
68 MGP 0.553191 0.961039
69 U A G G 0.548673 0.935065
70 G4M 0.548387 0.880952
71 6G0 0.547368 0.961039
72 G1R G1R 0.542373 0.924051
73 P2G 0.527473 0.883117
74 PGD O 0.525 0.850575
75 ADP 0.522222 0.92
76 R5I 0.520833 0.946667
77 R7I 0.520833 0.946667
78 GGM 0.517544 0.901235
79 DGP 0.516484 0.910256
80 DG 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G U 0.513274 0.9
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 AKW 0.504425 0.890244
86 G C 0.504348 0.9
87 GPC 0.491525 0.879518
88 G7M 0.483871 0.948052
89 6AD 0.479592 0.841463
90 ATP 0.473684 0.92
91 HEJ 0.473684 0.92
92 G2Q 0.471154 0.961039
93 5FA 0.46875 0.92
94 AQP 0.46875 0.92
95 GTA 0.468468 0.936709
96 7DD 0.468085 0.906667
97 G G G RPC 0.466102 0.875
98 SGP 0.463158 0.82716
99 01G 0.462963 0.902439
100 HFD 0.459184 0.873418
101 B4P 0.457447 0.894737
102 AP5 0.457447 0.894737
103 A2D 0.456522 0.894737
104 6YZ 0.455446 0.896104
105 G G G C 0.455285 0.9125
106 5GP 5GP 0.454545 0.883117
107 ANP 0.454545 0.896104
108 ACQ 0.454545 0.896104
109 AT4 0.452632 0.884615
110 A G C C 0.451613 0.911392
111 APC G U 0.45082 0.886076
112 PRT 0.449541 0.959459
113 G U34 0.449153 0.888889
114 DG DG 0.448598 0.865854
115 ITT 0.447917 0.868421
116 BA3 0.446809 0.894737
117 C2E 0.444444 0.921053
118 PCG 0.444444 0.933333
119 35G 0.444444 0.933333
120 MGO 0.441176 0.864198
121 AN2 0.4375 0.907895
122 G C C C 0.4375 0.924051
123 M33 0.43299 0.883117
124 UCG 0.429688 0.911392
125 A G U 0.42963 0.888889
126 ACP 0.428571 0.896104
127 MGQ 0.424528 0.935897
128 AR6 0.424242 0.894737
129 7DT 0.424242 0.906667
130 APR 0.424242 0.894737
131 93A 0.42268 0.833333
132 A4P 0.420168 0.869048
133 G8D 0.42 0.875
134 AD9 0.42 0.896104
135 SAP 0.42 0.873418
136 AGS 0.42 0.873418
137 CA0 0.418367 0.896104
138 ATF 0.417476 0.884615
139 AGO 0.414634 0.888889
140 A G U U 0.414286 0.888889
141 NIA 0.413043 0.82716
142 MGV 0.412844 0.890244
143 TAT 0.411765 0.884615
144 T99 0.411765 0.884615
145 ADQ 0.411215 0.871795
146 A1R 0.411215 0.839506
147 RGT 0.410714 0.909091
148 CGP 0.409836 0.86747
149 C1Z 0.409091 0.986486
150 A 0.408602 0.893333
151 AMP 0.408602 0.893333
152 UP5 0.40678 0.873418
153 AMZ 0.406593 0.918919
154 C2R 0.406593 0.906667
155 JBT 0.405882 0.778947
156 A22 0.40566 0.907895
157 25L 0.405405 0.907895
158 ADX 0.40404 0.809524
159 8OD 0.401961 0.946667
160 50T 0.4 0.883117
161 4TC 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3RWO; Ligand: GDP; Similar sites found with APoc: 574
This union binding pocket(no: 1) in the query (biounit: 3rwo.bio3) has 26 residues
No: Leader PDB Ligand Sequence Similarity
1 1M7G AV2 None
2 2OFW ADX None
3 1M7G ADX None
4 2PEZ DAT None
5 2PEZ GGZ None
6 2RGX AP5 None
7 6FHQ DE5 None
8 2IL4 COA None
9 2O66 FLC None
10 5MVR ADP None
11 5ZB0 ADP None
12 5ZB0 TYD None
13 3H86 AP5 None
14 1IZC PYR None
15 1M0S CIT None
16 1M7G ADP None
17 2DT9 THR None
18 1P72 ADP 1.08108
19 4JLS 3ZE 1.31579
20 3A1S GDP 1.62162
21 1G7S GDP 1.62162
22 2FAH GDP 1.62162
23 4ZNL BEF ADP 1.62162
24 6AIC AMP 1.62162
25 4NU0 AP5 1.62162
26 3CV2 OXL 1.62162
27 1HTW ADP 1.89873
28 2B99 RDL 1.92308
29 4A34 FUL 2.04082
30 5KUT GDP 2.1164
31 2ZR9 DTP 2.16216
32 1E2K TMC 2.16216
33 2P69 PLP 2.16216
34 5X40 ACP 2.16216
35 3BER AMP 2.16216
36 1VKJ A3P 2.16216
37 3BFV ADP 2.16216
38 1Y63 ADP 2.17391
39 3IIJ ADP 2.22222
40 4LPS GDP 2.7027
41 1BG2 ADP 2.7027
42 5GVR LMR 2.7027
43 5WC2 ADP 2.7027
44 6DEF GCP 2.7027
45 3EZ2 ADP 2.7027
46 1XKV ATP 2.7027
47 2ZPA ADP 2.7027
48 2FNA ADP 2.7027
49 4ZJS 4P0 2.7027
50 3HU3 AGS 2.7027
51 5DT6 GLU 2.7027
52 5TIV A3P 2.7027
53 3BPX SAL 2.7027
54 1KCC GTR 2.7027
55 4GBM A3P 2.7027
56 4PYA 2X3 3.10559
57 1GOJ ADP 3.24324
58 3COB ADP 3.24324
59 3LRE ADP 3.24324
60 1T5C ADP 3.24324
61 2ZFI ADP 3.24324
62 3TBK ANP 3.24324
63 3IO3 ADP 3.24324
64 4IEE AGS 3.24324
65 2WOJ ADP ALF 3.24324
66 3ZS9 ADP ALF 3.24324
67 1DAK ADP 3.24324
68 1DAK DPU 3.24324
69 2OZE AGS 3.24324
70 1P9B GDP 3.24324
71 1X6V ADP 3.24324
72 4Q1A 2XZ 3.24324
73 4Q1A UDP 3.24324
74 1NST A3P 3.24324
75 5H68 AGS 3.24324
76 2Z5F A3P 3.24324
77 5LJW ANP 3.24324
78 3W68 4PT 3.24324
79 2GKS ADP 3.24324
80 1U3G ADP 3.24324
81 1D2N ANP 3.30882
82 5W7Q GDP 3.78378
83 2FH5 GTP 3.78378
84 2W58 ADP 3.78378
85 6A20 ADP 3.78378
86 1F9V ADP 3.78378
87 3DC4 ADP 3.78378
88 2QTV GNP 3.78378
89 3ZFD ANP 3.78378
90 1SVI GDP 3.78378
91 5ZBR ANP 3.78378
92 1H65 GDP 3.78378
93 2PL3 ADP 3.78378
94 1Z6T ADP 3.78378
95 4KBF AMP 3.78378
96 4YJ1 ADP 3.78378
97 4XTR ATP 3.78378
98 4XVU ATP 3.78378
99 1L2T ATP 3.78378
100 4XTR ADP 3.78378
101 4TL6 ANP 3.78378
102 2J5V PCA 3.78378
103 3DCJ THH 3.78378
104 1JS8 MAN MAN BMA 3.78378
105 3VM7 GLC 3.78378
106 3N71 SFG 3.78378
107 4MAF ADX 3.78378
108 4WS6 WBU 3.78378
109 3FIU POP 3.78378
110 3FSY SCA 3.78378
111 3QVV A3P 3.78378
112 1B0U ATP 3.81679
113 4P83 U5P 3.84615
114 2HCJ GDP 4.32432
115 3U6B GDP 4.32432
116 4P3Y GDP 4.32432
117 4J0Q GDP 4.32432
118 3WY9 GDP 4.32432
119 1D8T GDP 4.32432
120 5JBQ GDP 4.32432
121 3WYA GDP 4.32432
122 3U6K GDP 4.32432
123 4LC1 GDP 4.32432
124 2BVN GNP 4.32432
125 4RD0 GDP 4.32432
126 4PC3 GDP 4.32432
127 1M2O GNP 4.32432
128 4PPF FLC 4.32432
129 4AG5 ADP 4.32432
130 4H1V GNP 4.32432
131 4G5G GDP 4.32432
132 1SQ5 ADP 4.32432
133 3VX3 ADP 4.32432
134 1U0J ADP 4.32432
135 1IN4 ADP 4.32432
136 1W5T ANP 4.32432
137 2X7I CIT 4.32432
138 1W5T ADP 4.32432
139 3RC3 ANP 4.32432
140 1T3D CYS 4.32432
141 5G41 AP5 4.32432
142 3FB4 AP5 4.32432
143 3P4X ADP 4.32432
144 6B8B ADP 4.32432
145 4B5W PYR 4.32432
146 5M7P ADP 4.32432
147 2BO4 FLC 4.32432
148 2J9L ATP 4.32432
149 3AB4 THR 4.49438
150 6H5E ANP 4.78088
151 5W76 GDP 4.86486
152 1G7C 5GP 4.86486
153 1JJ7 ADP 4.86486
154 5TSH ADP 4.86486
155 1RRC ADP 4.86486
156 3E70 GDP 4.86486
157 5TSH ANP 4.86486
158 1OXV ANP 4.86486
159 3FWY ADP 4.86486
160 5LB3 ADP 4.86486
161 3EWA ANP 4.86486
162 1ION ADP 4.86486
163 5UIV ADP 4.86486
164 1XX6 ADP 4.86486
165 2GDJ ANP 4.86486
166 2IXE ATP 4.86486
167 3IUY AMP 4.86486
168 1G3Q ADP 4.86486
169 5VHC BEF ADP 4.86486
170 3FYH ADP 4.86486
171 1S3G AP5 4.86486
172 2O0J ADP 4.86486
173 4IOK ADP 4.86486
174 1AQU A3P 4.86486
175 4IOK XPO 4.86486
176 5WRI A3P 4.86486
177 1UJ2 ADP 4.86486
178 1UJ2 C5P 4.86486
179 5WRJ A3P 4.86486
180 4HE2 AMP 4.86486
181 2IYL GDP 4.92958
182 4TTQ ATP 5.11628
183 4WOP CTP 5.33333
184 2QN6 GDP 5.37634
185 2Y65 ADP 5.40541
186 2PZE ATP 5.40541
187 1WDT GTP 5.40541
188 5L3V GDP 5.40541
189 4RZ3 ADP 5.40541
190 3FKQ ATP 5.40541
191 5I0H ADP BEF 5.40541
192 1LVK MNT BEF 5.40541
193 5Z69 AGS 5.40541
194 5E5U MLI 5.40541
195 2NCD ADP 5.40541
196 5EXT ADP 5.40541
197 4NE2 SH2 5.40541
198 4NE2 ADP 5.40541
199 5I34 GDP 5.40541
200 1NY5 ADP 5.40541
201 1APZ ASP 5.55556
202 1KK1 GNP 5.94595
203 2XT3 ADP 5.94595
204 4ZKD GDP 5.94595
205 4CVN ADP 5.94595
206 4KFU ACP 5.94595
207 1V8K ANP 5.94595
208 4B47 GDP 5.94595
209 5XKT GNP 5.94595
210 1JI0 ATP 5.94595
211 2XTN GTP 5.94595
212 5BN3 ADP 5.94595
213 2OBM ADP 5.94595
214 3BOS CDP 5.94595
215 1IHU AF3 5.94595
216 1IHU ADP 5.94595
217 4R2I ANP 5.94595
218 2B8W ALF 5GP 5.94595
219 4U60 SIA GAL NGA 5.94595
220 4U60 SIA 5.94595
221 4YS0 ADP 5.94595
222 3FVQ ATP 5.94595
223 5AK0 8V1 5.94595
224 1OS1 PYR 5.94595
225 1R6B ADP 5.94595
226 5HR5 ADP 5.94595
227 1OYY AGS 5.94595
228 1CR1 TTP 5.94595
229 2GWH A3P 5.94595
230 6I6X H6B 5.94595
231 4U60 SIA GAL BGC NGA GAL 5.94595
232 4Z7X 3CX 5.94595
233 1WRA PC 5.94595
234 1OS1 ATP 5.94595
235 6I6R H62 5.94595
236 3WXM GTP 6.26398
237 1KO8 6PG 6.28571
238 1VHT BA3 6.42202
239 4QM7 GTP 6.43275
240 5H7J GCP 6.48649
241 2WIC GNP 6.48649
242 4NCN GTP 6.48649
243 4TMZ GSP 6.48649
244 1TAD ALF 6.48649
245 1TAD GDP 6.48649
246 2RCN GDP 6.48649
247 1BH2 GSP 6.48649
248 3DEF GDP 6.48649
249 2OM2 GDP 6.48649
250 1FQK GDP 6.48649
251 1ZCB GDP 6.48649
252 1TQ4 GDP 6.48649
253 4YMU ATP 6.48649
254 1SVK ALF GDP 6.48649
255 1Y3A GDP 6.48649
256 3B9Q MLI 6.48649
257 2OG2 MLI 6.48649
258 5L3R GCP 6.48649
259 5FTB ANP 6.48649
260 2C9O ADP 6.48649
261 2D7D ADP 6.48649
262 1IWE IMP 6.48649
263 1Q19 SSC 6.48649
264 1FQK ALF 6.48649
265 1NHX FTB 6.48649
266 5T63 ALA ALA ALA ALA 6.48649
267 5FHD ADP ALF 6.48649
268 2WW4 ADP 6.48649
269 3QKT ANP 6.48649
270 1NHX PEP 6.48649
271 4HSE ADP 6.48649
272 3BFX A3P 6.48649
273 2BEK ATP 6.48649
274 4QRH 0O2 6.48649
275 2GMV UN8 6.48649
276 2GMV PEP 6.48649
277 2ZJ5 ADP 6.48649
278 4QOS ADP 6.48649
279 2VVG ADP 7.02703
280 4U00 ADP 7.02703
281 1G6H ADP 7.02703
282 1CS4 GSP 7.02703
283 6AU6 GDP 7.02703
284 1PUJ GNP 7.02703
285 3TK1 GDP 7.02703
286 4R43 GDP 7.02703
287 4FCW ADP 7.02703
288 4LJ9 ACP 7.02703
289 5L3S GNP 7.02703
290 2XAU ADP 7.02703
291 1FNN ADP 7.02703
292 5L3W GDP 7.02703
293 1G41 ADP 7.02703
294 1AKY AP5 7.02703
295 2Q8M AMP 7.02703
296 4IDN GNP 7.02703
297 1T8U A3P 7.02703
298 5E50 ALA TYR ASP GLU SEP TPO ASP GLU GLU 7.20721
299 3KTA AP5 7.51445
300 1XEX ATP 7.55814
301 5YV5 ADP 7.56757
302 1YQT ADP 7.56757
303 4NON GDP 7.56757
304 3B5J 12D 7.56757
305 5XDR ADP 7.56757
306 2D2F ADP 7.56757
307 5IFS ADP 7.56757
308 1R0X ATP 7.56757
309 5Y6N ADP 7.56757
310 5VGR GDP 7.56757
311 5K5Z ANP 7.56757
312 1K6M AGS 7.56757
313 3BRE C2E 7.56757
314 5IRN ADP 7.56757
315 3UIE ANP 7.56757
316 4MKF AP5 7.56757
317 2QEN ADP 7.56757
318 4GOX A3P 7.56757
319 4JWX 1N4 7.56757
320 1K4M CIT 7.56757
321 1P7T PYR 7.56757
322 4B9E FAH 7.56757
323 1OFH ADP 8.04598
324 2AWN ADP 8.10811
325 3EC1 GDP 8.10811
326 2C77 GNP 8.10811
327 1LVG ADP 8.10811
328 1NRJ GTP 8.10811
329 2C78 GNP 8.10811
330 4WZ6 ATP 8.10811
331 5IRR GSP 8.10811
332 2DPY ADP 8.10811
333 4XGU ADP 8.10811
334 3DZD ADP 8.10811
335 2FSH ANP 8.10811
336 1F5N GNP 8.10811
337 4ZDJ UTP 8.10811
338 4MKG AP5 8.10811
339 2IZ1 ATR 8.10811
340 5G3Y ADP 8.10811
341 3KC1 2T6 8.10811
342 4LZB URA 8.10811
343 3MD0 GDP 8.64865
344 5CK5 GDP 8.64865
345 5GOE GDP 8.64865
346 3DKP ADP 8.64865
347 1W0J ADP 8.64865
348 2CE7 ADP 8.64865
349 2CK3 ANP 8.64865
350 2VB6 ADP BEF 8.64865
351 5MZN ADP 8.64865
352 1QF5 GDP 8.64865
353 1QF5 RPL 8.64865
354 1W0J ADP BEF 8.64865
355 2CK3 ADP 8.64865
356 4PFO ADP 8.64865
357 2V7Q ATP 8.64865
358 4BFW ZVW 8.64865
359 2V7Q ADP 8.64865
360 1NN5 2DT 8.64865
361 1NN5 ANP 8.64865
362 6FMC DUE 8.86076
363 1ZUI SKM 8.92857
364 5J1S ATP 8.94309
365 5W75 GDP 9.18919
366 2XTZ GSP 9.18919
367 4PX9 ADP 9.18919
368 3KJI ADP 9.18919
369 5J1J ANP 9.18919
370 2ZTS ADP 9.18919
371 2CHG ANP 9.18919
372 2BIF SIN 9.18919
373 2BIF ANP 9.18919
374 1ZIN AP5 9.18919
375 2I4I AMP 9.18919
376 3ZOK GLY 9.18919
377 1Z83 AP5 9.18919
378 1W7J ADP BEF 9.27152
379 1F2U ATP 9.45946
380 5N69 ADP 9.54774
381 5FG3 GDP 9.72973
382 4R98 GNH 9.72973
383 3VMF GTP 9.72973
384 3A4M ADP 9.72973
385 1GOT GDP 9.72973
386 1GP2 GDP 9.72973
387 4E03 ADP 9.72973
388 4D81 ADP 9.72973
389 4ZG4 VO4 ADP 9.72973
390 2QZ4 ADP 9.72973
391 1SVM ATP 9.72973
392 4X8O AP5 9.72973
393 3QXC ATP 9.72973
394 3W5J GDP 10.2703
395 5LTJ BEF 10.2703
396 4IHQ ADP 10.2703
397 1RJ9 GCP 10.2703
398 4A4Z ANP 10.2703
399 5LTJ ADP 10.2703
400 6EDK 1YA 10.2703
401 5M04 GDP 10.8108
402 5H7K GDP 10.8108
403 1D2E GDP 10.8108
404 4V03 ADP 10.8108
405 6B4K ANP 10.8108
406 3ZQ6 ADP ALF 10.8108
407 2GK6 ADP 10.8108
408 3RLF ANP 10.8108
409 1YTM ATP 10.8108
410 5U32 GDP 11.3514
411 2CDN ADP 11.8919
412 2Q2Y ADP 11.8919
413 2Q2Y MKR 11.8919
414 1JJV ATP 12.4324
415 2HF9 GSP 12.4324
416 1FP6 ADP 12.4324
417 4WZA ADP 12.4324
418 4WZA ACP 12.4324
419 5MEX PAP 12.4324
420 1D8C GLV 12.4324
421 3DGY 2GP 13.4021
422 2KIN ADP 13.5135
423 2IS6 ADP 13.5135
424 1NJF ADP 13.5135
425 1NJF AGS 13.5135
426 5LV1 78T 13.5135
427 4BAS GNP 14.0541
428 4HI0 GDP 14.0541
429 4YDS ATP 14.0541
430 3NJQ NJQ 14.0541
431 3TMK T5A 14.0541
432 1GXU 2HP 14.2857
433 3ZIA ADP 14.5946
434 3ZIA ATP 14.5946
435 5H67 ATP 14.5946
436 3ITJ CIT 14.5946
437 3HRD NIO 14.5946
438 2WJG GDP 15.1351
439 2WHX ADP 15.1351
440 2JLR ANP 15.1351
441 6G14 G4P 15.6757
442 3B7G ANP 15.6757
443 1DAR GDP 16.2162
444 2GJ8 ALF GDP 16.2791
445 1BO4 COA 16.6667
446 5HCN GCP 16.7568
447 1KK8 BEF ADP 16.7568
448 1B7T ADP 16.7568
449 4KVA GTP 16.7568
450 2WJH FLC 16.8675
451 2WJH GDP 16.8675
452 1SKQ GDP 17.2973
453 2CBZ ATP 17.2973
454 4OHY ANP 17.2973
455 4BQS ADP 17.6136
456 4BQS K2Q 17.6136
457 1G6O ADP 17.8378
458 3Q9L ATP 17.8378
459 4OI4 ATP 18.2609
460 2WCV FUC 20.7143
461 1UPT GTP 21.0526
462 5EE5 GTP 21.0526
463 1ZJ6 G3D 21.0811
464 4LYA ATP 21.0811
465 6C90 ADP 21.1538
466 1F6B GDP 21.6216
467 4JLV ADP 21.6216
468 3T34 GDP 22.1622
469 2X77 GDP 23.2804
470 3AQ4 GDP 23.3696
471 6CS8 F9Y 23.7838
472 5KSP GDP 24.3243
473 5KSZ GCP 24.3243
474 3CNL GNP 25.4054
475 5DI3 GNP 25.4054
476 4M9Q GNP 25.4054
477 1WF3 GNP 25.9459
478 3T12 GDP ALF 25.9459
479 3T1O GDP 25.9459
480 1FQJ GDP 26.1905
481 1FQJ ALF 26.1905
482 3DOE GTP 28.1081
483 1KSH GDP 28.1081
484 6FAA ADP 28.6486
485 1YZG GDP 30.1676
486 1QHG ATP 30.2703
487 2A5F GTP 30.2857
488 4GOJ GNP 31.3514
489 4ZI2 GNP 31.3514
490 1FZQ GDP 31.4917
491 4KAX GTP 31.9527
492 3PCR GTP 32.0988
493 3REF GDP 32.4324
494 3N5C GDP 32.716
495 2W83 GTP 32.7273
496 5YT0 GDP 33.3333
497 2ZEJ GDP 34.2391
498 1RE0 GDP 35.3659
499 1S9D GDP 35.3659
500 1O3Y GTP 35.5422
501 2J59 GTP 35.5422
502 1J2J GTP 35.5422
503 1MR3 G3D 36.4641
504 4V0K GDP 37.2781
505 1ZD9 GDP 37.2973
506 1R4A GNP 38.7879
507 4YLG GDP 39.3064
508 1I4D GDP 41.6216
509 1OW3 GDP 41.6216
510 5JCP GDP ALF 41.6216
511 4XSH GSP 41.8994
512 4D0N GDP 42.1622
513 3LXR GDP 42.1622
514 2W2X GSP 42.1622
515 1E96 GTP 42.1622
516 6BCB GSP 42.1622
517 6BCA GSP 42.1622
518 6BC0 GSP 42.1622
519 2VOH CIT 42.3077
520 1TX4 ALF GDP 42.3729
521 1G4U GDP 42.3913
522 1G4U AF3 42.3913
523 1DS6 GDP 42.7027
524 1GRN GDP 42.7027
525 4ITR GDP 42.7027
526 5UPK GNP 42.7027
527 2NGR GDP 42.7027
528 4DID GDP 42.7027
529 2WMO GTP 42.7027
530 2NGR AF3 42.7027
531 1GRN AF3 42.7027
532 1CXZ GSP 42.8571
533 5HPY GDP 43.2432
534 2FJU GSP 43.2584
535 4XOI GTP 43.3333
536 4YC7 GNP 43.6464
537 1HE1 GDP 43.75
538 1HE1 AF3 43.75
539 5IRC GDP 43.7838
540 1NF3 GNP 45.4054
541 3WYG GTP 45.6044
542 3M1I GTP 45.9459
543 3WYF GTP 45.9459
544 3GJ7 GDP 46.4865
545 3GJ4 GDP 46.4865
546 3GJ5 GDP 46.4865
547 3GJ8 GDP 46.4865
548 3GJ0 GDP 47.027
549 3GJ3 GDP 47.027
550 5BXQ GDP 47.027
551 3CH5 GDP 47.027
552 5UWQ GNP 47.027
553 5UWP GNP 47.027
554 5UWU GNP 47.027
555 4HAT GNP 47.027
556 5UWO GNP 47.027
557 6CIT GNP 47.027
558 5UWS GNP 47.027
559 5UWT GNP 47.027
560 5DHF GNP 47.027
561 5UWW GNP 47.027
562 5DIF GNP 47.027
563 5UWI GNP 47.027
564 5UWR GNP 47.027
565 5UWJ GNP 47.027
566 5UWH GNP 47.027
567 1IBR GNP 47.027
568 5DI9 GNP 47.027
569 3GJX GTP 47.5676
570 2A9K GDP 48.6486
571 1WA5 GTP 49.4318
572 6FA4 GNP 49.711
573 5TB5 GDP 49.7297
574 5TAR GDP 49.7297
Pocket No.: 2; Query (leader) PDB : 3RWO; Ligand: GDP; Similar sites found with APoc: 38
This union binding pocket(no: 2) in the query (biounit: 3rwo.bio3) has 20 residues
No: Leader PDB Ligand Sequence Similarity
1 2VWT PYR None
2 4FN4 NAD 1.62162
3 2QQ0 ANP 1.63043
4 2QQ0 ADP 1.63043
5 2QQ0 TMP 1.63043
6 2QQ0 THM 1.63043
7 2GNK ATP 2.67857
8 2JFV FLC 2.7027
9 1UKZ ADP 3.24324
10 4M38 SAH 3.24324
11 1QF9 ALF 3.78378
12 1QF9 ADP 3.78378
13 1QF9 C5P 3.78378
14 3QVV 3QV 3.78378
15 1OKE BOG 3.78378
16 1G3M A3P 3.78378
17 1G3M PCQ 3.78378
18 5KMS FAD 4.86486
19 4UTG ANP 5.20231
20 3MGB PAP 5.40541
21 5OSW DIU 5.40541
22 2QG6 NMN 5.94595
23 6C0B PAM 5.94595
24 2ZPT A3P 5.94595
25 3QDK QDK 7.02703
26 2A2C ADP 7.02703
27 2A2C NG1 7.02703
28 5L01 6Z4 7.02703
29 4HUT ATP 7.56757
30 4JAW GAL NGT 7.56757
31 2JJK R15 8.10811
32 1V47 ADX 8.10811
33 4K7O EKZ 11.3095
34 5A5W GUO 11.8919
35 6GSG RCO 12.4324
36 1W4R TTP 14.0541
37 2ORV 4TA 14.0541
38 2YOH WMJ 18.9189
Pocket No.: 3; Query (leader) PDB : 3RWO; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 3rwo.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 3RWO; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 3rwo.bio2) has 20 residues
No: Leader PDB Ligand Sequence Similarity
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