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Receptor
PDB id Resolution Class Description Source Keywords
3RU2 2.2 Å EC: 4.2.1.93 CRYSTAL STRUCTURE OF TM0922, A FUSION OF A DOMAIN OF UNKNOWN AND ADP/ATP-DEPENDENT NAD(P)H-HYDRATE DEHYDRATASE FROM THERM ARITIMA SOAKED WITH NADPH. THERMOTOGA MARITIMA UNKNOWN FUNCTION ADP/ATP-DEPENDENT NAD(P)H-HYDRATE DEHYDRATLYASE
Ref.: IDENTIFICATION OF UNKNOWN PROTEIN FUNCTION USING ME COCKTAIL SCREENING. STRUCTURE V. 20 1715 2012
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ALA TRP LEU PHE GLU ALA B:1;
Valid;
none;
submit data n/a n/a n/a n/a
K A:491;
Part of Protein;
none;
submit data
39.098 K [K+]
NDP A:492;
Valid;
none;
submit data
745.421 C21 H30 N7 O17 P3 c1nc(...
NPW A:493;
Valid;
none;
submit data
763.436 C21 H32 N7 O18 P3 c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3RS8 2.1 Å EC: 4.2.1.93 CRYSTAL STRUCTURE OF TM0922, A FUSION OF A DOMAIN OF UNKNOWN AND ADP/ATP-DEPENDENT NAD(P)H-HYDRATE DEHYDRATASE FROM THERM ARITIMA IN COMPLEX WITH ADP-RIBOSE THERMOTOGA MARITIMA UNKNOWN FUNCTION ADP/ATP-DEPENDENT NAD(P)H-HYDRATE DEHYDRATLYASE
Ref.: IDENTIFICATION OF UNKNOWN PROTEIN FUNCTION USING ME COCKTAIL SCREENING. STRUCTURE V. 20 1715 2012
Members (19)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 3RT9 - COA C21 H36 N7 O16 P3 S CC(C)(CO[P....
2 3RTG - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
3 3RRF - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
4 3RS8 Kd = 5.1 uM APR C15 H23 N5 O14 P2 c1nc(c2c(n....
5 3RTB - ALA TRP LEU PHE GLU ALA n/a n/a
6 3RTE - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
7 3RTC - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
8 3RSG - APR C15 H23 N5 O14 P2 c1nc(c2c(n....
9 3RSF - B4P C20 H28 N10 O19 P4 c1nc(c2c(n....
10 3RT7 - ALA ALA TRP LEU PHE GLU ALA n/a n/a
11 3RRJ - AP5 C20 H29 N10 O22 P5 c1nc(c2c(n....
12 3RS9 - BA3 C20 H27 N10 O16 P3 c1nc(c2c(n....
13 3RSS Kd = 6 uM NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
14 3RTA - ALA ALA TRP LEU PHE GLU ALA n/a n/a
15 3RRB - AMP C10 H14 N5 O7 P c1nc(c2c(n....
16 3RSQ - NAI C21 H29 N7 O14 P2 c1nc(c2c(n....
17 3RU2 - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
18 3RRE - ALA ALA TRP LEU PHE GLU ALA n/a n/a
19 3RTD - ALA ALA TRP LEU PHE GLU ALA n/a n/a
70% Homology Family (19)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 3RT9 - COA C21 H36 N7 O16 P3 S CC(C)(CO[P....
2 3RTG - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
3 3RRF - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
4 3RS8 Kd = 5.1 uM APR C15 H23 N5 O14 P2 c1nc(c2c(n....
5 3RTB - ALA TRP LEU PHE GLU ALA n/a n/a
6 3RTE - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
7 3RTC - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
8 3RSG - APR C15 H23 N5 O14 P2 c1nc(c2c(n....
9 3RSF - B4P C20 H28 N10 O19 P4 c1nc(c2c(n....
10 3RT7 - ALA ALA TRP LEU PHE GLU ALA n/a n/a
11 3RRJ - AP5 C20 H29 N10 O22 P5 c1nc(c2c(n....
12 3RS9 - BA3 C20 H27 N10 O16 P3 c1nc(c2c(n....
13 3RSS Kd = 6 uM NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
14 3RTA - ALA ALA TRP LEU PHE GLU ALA n/a n/a
15 3RRB - AMP C10 H14 N5 O7 P c1nc(c2c(n....
16 3RSQ - NAI C21 H29 N7 O14 P2 c1nc(c2c(n....
17 3RU2 - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
18 3RRE - ALA ALA TRP LEU PHE GLU ALA n/a n/a
19 3RTD - ALA ALA TRP LEU PHE GLU ALA n/a n/a
50% Homology Family (19)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 3RT9 - COA C21 H36 N7 O16 P3 S CC(C)(CO[P....
2 3RTG - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
3 3RRF - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
4 3RS8 Kd = 5.1 uM APR C15 H23 N5 O14 P2 c1nc(c2c(n....
5 3RTB - ALA TRP LEU PHE GLU ALA n/a n/a
6 3RTE - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
7 3RTC - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
8 3RSG - APR C15 H23 N5 O14 P2 c1nc(c2c(n....
9 3RSF - B4P C20 H28 N10 O19 P4 c1nc(c2c(n....
10 3RT7 - ALA ALA TRP LEU PHE GLU ALA n/a n/a
11 3RRJ - AP5 C20 H29 N10 O22 P5 c1nc(c2c(n....
12 3RS9 - BA3 C20 H27 N10 O16 P3 c1nc(c2c(n....
13 3RSS Kd = 6 uM NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
14 3RTA - ALA ALA TRP LEU PHE GLU ALA n/a n/a
15 3RRB - AMP C10 H14 N5 O7 P c1nc(c2c(n....
16 3RSQ - NAI C21 H29 N7 O14 P2 c1nc(c2c(n....
17 3RU2 - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
18 3RRE - ALA ALA TRP LEU PHE GLU ALA n/a n/a
19 3RTD - ALA ALA TRP LEU PHE GLU ALA n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ALA TRP LEU PHE GLU ALA; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Ligand no: 2; Ligand: NDP; Similar ligands found: 172
No: Ligand ECFP6 Tc MDL keys Tc
1 NDP 1 1
2 0WD 0.827273 1
3 NAI 0.803738 0.986842
4 NMN AMP PO4 0.794643 0.948052
5 NPW 0.692308 0.962025
6 NZQ 0.686441 0.987013
7 1DG 0.68 1
8 DG1 0.68 1
9 A2R 0.650943 0.909091
10 A22 0.64486 0.934211
11 TXP 0.644628 0.924051
12 ATR 0.640777 0.894737
13 NA7 0.636364 0.886076
14 XNP 0.620968 0.949367
15 AP0 0.598361 0.948718
16 A2P 0.598039 0.881579
17 NJP 0.574803 0.923077
18 25L 0.550847 0.934211
19 ODP 0.550388 0.936709
20 NAX 0.544 0.949367
21 25A 0.53913 0.921053
22 80F 0.537879 0.914634
23 2AM 0.529412 0.87013
24 6V0 0.519685 0.974026
25 NAP 0.514493 0.922078
26 7L1 0.507143 0.763441
27 EAD 0.507143 0.949367
28 A2D 0.504673 0.921053
29 TXE 0.503876 0.935897
30 NA0 0.496454 0.910256
31 TXD 0.496124 0.911392
32 SAP 0.495575 0.875
33 AGS 0.495575 0.875
34 P1H 0.493056 0.925926
35 CO7 0.489796 0.791209
36 TAP 0.489362 0.864198
37 PAP 0.482456 0.907895
38 BA3 0.481818 0.921053
39 NAJ PZO 0.478261 0.924051
40 ATP 0.477876 0.921053
41 HEJ 0.477876 0.921053
42 B4P 0.477477 0.921053
43 AP5 0.477477 0.921053
44 ADP 0.477477 0.921053
45 OAD 0.47541 0.897436
46 AR6 0.473684 0.896104
47 AQP 0.473684 0.921053
48 5FA 0.473684 0.921053
49 APR 0.473684 0.896104
50 AN2 0.473214 0.909091
51 3OD 0.467742 0.897436
52 50T 0.464912 0.884615
53 NAJ PYZ 0.464789 0.879518
54 9X8 0.463415 0.851852
55 PO4 PO4 A A A A PO4 0.463415 0.857143
56 V3L 0.461538 0.896104
57 2A5 0.46087 0.85
58 AT4 0.460177 0.886076
59 A1R 0.459016 0.841463
60 4AD 0.459016 0.875
61 ADQ 0.459016 0.897436
62 OVE 0.458716 0.8375
63 OMR 0.458647 0.813953
64 PPS 0.457627 0.811765
65 AD9 0.456897 0.897436
66 CA0 0.45614 0.897436
67 M33 0.45614 0.884615
68 ADJ 0.455882 0.879518
69 A3P 0.455357 0.894737
70 ACP 0.452174 0.897436
71 ENP 0.451613 0.85
72 UP5 0.451128 0.948052
73 SRP 0.45 0.8625
74 ANP 0.449153 0.897436
75 ACQ 0.449153 0.897436
76 PRX 0.448276 0.82716
77 A3R 0.447154 0.841463
78 5AL 0.445378 0.884615
79 7D4 0.443478 0.8375
80 ADX 0.443478 0.811765
81 6YZ 0.438017 0.897436
82 A 0.436364 0.894737
83 AMP 0.436364 0.894737
84 4TC 0.433824 0.924051
85 7D3 0.433628 0.8375
86 DCA 0.433566 0.788889
87 ETB 0.433566 0.797753
88 BIS 0.433071 0.864198
89 1ZZ 0.433071 0.802326
90 00A 0.432 0.864198
91 ATF 0.429752 0.886076
92 DQV 0.428571 0.934211
93 0T1 0.427586 0.788889
94 5SV 0.427419 0.788235
95 8QN 0.427419 0.884615
96 3AM 0.427273 0.857143
97 N01 0.426573 0.884615
98 PR8 0.425197 0.811765
99 LAD 0.425197 0.821429
100 WAQ 0.425197 0.841463
101 DTP 0.425 0.8375
102 AMO 0.424 0.886076
103 PAJ 0.424 0.843373
104 APC 0.423729 0.886076
105 UPA 0.423358 0.935897
106 48N 0.422222 0.853659
107 FYA 0.421875 0.860759
108 PTJ 0.421875 0.853659
109 CNA 0.421429 0.910256
110 PUA 0.42069 0.9125
111 DND 0.419118 0.910256
112 NXX 0.419118 0.910256
113 AV2 0.418033 0.848101
114 COA 0.417808 0.788889
115 3UK 0.417323 0.897436
116 OOB 0.416 0.909091
117 IVC 0.415584 0.78022
118 DAT 0.415254 0.8375
119 NDO 0.414966 0.897436
120 139 0.414286 0.901235
121 B5V 0.414062 0.886076
122 T99 0.413223 0.886076
123 TAT 0.413223 0.886076
124 3AT 0.413223 0.896104
125 YLB 0.413043 0.784091
126 62F 0.4125 0.823529
127 ABM 0.412281 0.848101
128 B5M 0.412214 0.875
129 YAP 0.412214 0.875
130 YLP 0.411765 0.784091
131 NB8 0.410853 0.853659
132 ME8 0.410853 0.802326
133 SON 0.410256 0.886076
134 DLL 0.409449 0.909091
135 AHX 0.409449 0.853659
136 CAO 0.409396 0.763441
137 30N 0.409396 0.72449
138 AMX 0.409396 0.797753
139 COS 0.409396 0.771739
140 7D5 0.409091 0.8125
141 4UW 0.408759 0.9125
142 F2R 0.408451 0.825581
143 APX 0.407692 0.841463
144 SRA 0.40708 0.85
145 CMX 0.406667 0.788889
146 SCO 0.406667 0.788889
147 TYM 0.405797 0.886076
148 COD 0.405594 0.777778
149 CA6 0.405229 0.70297
150 OXK 0.405229 0.771739
151 AP2 0.405172 0.886076
152 A12 0.405172 0.886076
153 9SN 0.40458 0.853659
154 LAQ 0.404412 0.802326
155 T5A 0.404255 0.914634
156 FAM 0.403974 0.771739
157 ACO 0.403974 0.763441
158 FCX 0.403974 0.763441
159 VO4 ADP 0.403226 0.860759
160 ADP VO4 0.403226 0.860759
161 YLC 0.402878 0.823529
162 1VU 0.402597 0.763441
163 B5Y 0.401515 0.875
164 FA5 0.401515 0.886076
165 HAX 0.401316 0.771739
166 AR6 AR6 0.4 0.871795
167 CAJ 0.4 0.771739
168 AFH 0.4 0.843373
169 APU 0.4 0.923077
170 A U 0.4 0.898734
171 TXA 0.4 0.886076
172 4UU 0.4 0.948052
Ligand no: 3; Ligand: NPW; Similar ligands found: 155
No: Ligand ECFP6 Tc MDL keys Tc
1 NPW 1 1
2 NAX 0.803738 0.987342
3 NZQ 0.761062 0.974684
4 XNP 0.732759 0.9625
5 NDP 0.692308 0.962025
6 A2R 0.666667 0.875
7 A22 0.64486 0.898734
8 ATR 0.640777 0.860759
9 TXP 0.631148 0.890244
10 NA7 0.621622 0.876543
11 DG1 0.615385 0.962025
12 1DG 0.615385 0.962025
13 A2P 0.598039 0.848101
14 0WD 0.582677 0.962025
15 NJP 0.574803 0.888889
16 25L 0.550847 0.898734
17 ODP 0.550388 0.902439
18 NMN AMP PO4 0.546154 0.9125
19 NAI 0.544 0.949367
20 25A 0.53913 0.886076
21 2AM 0.529412 0.8375
22 NAP 0.525547 0.8875
23 6V0 0.507812 0.9375
24 NA0 0.507143 0.876543
25 A2D 0.504673 0.886076
26 TAP 0.5 0.833333
27 7L1 0.496454 0.795699
28 SAP 0.495575 0.843373
29 AGS 0.495575 0.843373
30 AR6 0.486726 0.8625
31 APR 0.486726 0.8625
32 TXD 0.484615 0.878049
33 PAP 0.482456 0.873418
34 BA3 0.481818 0.886076
35 TXE 0.480916 0.901235
36 ATP 0.477876 0.886076
37 HEJ 0.477876 0.886076
38 ADP 0.477477 0.886076
39 AP5 0.477477 0.886076
40 B4P 0.477477 0.886076
41 AP0 0.477273 0.91358
42 EAD 0.475524 0.938272
43 OAD 0.47541 0.864198
44 AQP 0.473684 0.886076
45 5FA 0.473684 0.886076
46 AT4 0.473214 0.853659
47 AN2 0.473214 0.875
48 80F 0.471014 0.927711
49 CO7 0.469799 0.824176
50 3OD 0.467742 0.864198
51 9X8 0.463415 0.821429
52 ENP 0.463415 0.819277
53 PO4 PO4 A A A A PO4 0.463415 0.825
54 DQV 0.461538 0.898734
55 V3L 0.461538 0.8625
56 ACQ 0.461538 0.8875
57 2A5 0.46087 0.864198
58 ADQ 0.459016 0.864198
59 OVE 0.458716 0.807229
60 AD9 0.456897 0.864198
61 M33 0.45614 0.851852
62 7D4 0.45614 0.807229
63 CA0 0.45614 0.864198
64 ADJ 0.455882 0.892857
65 A3P 0.455357 0.860759
66 P1H 0.452703 0.939024
67 ACP 0.452174 0.8875
68 50T 0.452174 0.851852
69 6YZ 0.45 0.8875
70 PR8 0.448 0.847059
71 B5V 0.448 0.853659
72 A1R 0.447154 0.855422
73 A3R 0.447154 0.855422
74 7D3 0.446429 0.807229
75 PPS 0.445378 0.784091
76 00A 0.443548 0.833333
77 ATF 0.441667 0.853659
78 3AM 0.440367 0.825
79 UP5 0.440298 0.9125
80 3UK 0.44 0.864198
81 SRP 0.438017 0.876543
82 OMR 0.437037 0.806818
83 ANP 0.436975 0.864198
84 A 0.436364 0.860759
85 AMP 0.436364 0.860759
86 PRX 0.435897 0.819277
87 4AD 0.435484 0.888889
88 NDO 0.434483 0.864198
89 4TC 0.433824 0.91358
90 5AL 0.433333 0.851852
91 BIS 0.433071 0.855422
92 AFH 0.431818 0.835294
93 CNA 0.431655 0.9
94 ADX 0.431034 0.784091
95 AV2 0.429752 0.817073
96 NXX 0.42963 0.876543
97 DND 0.42963 0.876543
98 OOB 0.427419 0.875
99 N01 0.426573 0.851852
100 9SN 0.426357 0.823529
101 LAQ 0.425373 0.795455
102 3AT 0.425 0.886076
103 FA5 0.423077 0.9
104 B5M 0.423077 0.843373
105 48N 0.422222 0.845238
106 7D5 0.422018 0.783133
107 1ZZ 0.421875 0.795455
108 DLL 0.420635 0.875
109 AMX 0.418919 0.831461
110 F2R 0.41844 0.860465
111 A12 0.417391 0.876543
112 AP2 0.417391 0.876543
113 8QN 0.416 0.851852
114 T5A 0.414286 0.927711
115 WAQ 0.414062 0.855422
116 LAD 0.414062 0.857143
117 ETB 0.413793 0.831461
118 DCA 0.413793 0.822222
119 T99 0.413223 0.853659
120 TAT 0.413223 0.853659
121 UPA 0.413043 0.901235
122 PAJ 0.412698 0.813953
123 AMO 0.412698 0.9
124 ABM 0.412281 0.817073
125 YAP 0.412214 0.888889
126 B5Y 0.412214 0.843373
127 APC 0.411765 0.876543
128 PTJ 0.410853 0.823529
129 ME8 0.410853 0.837209
130 TXA 0.410853 0.853659
131 HAX 0.410596 0.804348
132 AHX 0.409449 0.86747
133 CAO 0.409396 0.795699
134 NVA 2AD 0.408333 0.761905
135 0T1 0.408163 0.822222
136 COA 0.408163 0.822222
137 APX 0.407692 0.811765
138 SRA 0.40708 0.819277
139 NAJ PZO 0.406897 0.890244
140 NAJ PYZ 0.405405 0.848837
141 SOP 0.405229 0.804348
142 5SV 0.404762 0.781609
143 139 0.404255 0.891566
144 DDS 0.401639 0.82716
145 DTP 0.401639 0.851852
146 PUA 0.401361 0.902439
147 NB8 0.4 0.86747
148 A4P 0.4 0.883721
149 4UU 0.4 0.9125
150 AR6 AR6 0.4 0.839506
151 COS 0.4 0.804348
152 APU 0.4 0.888889
153 FYA 0.4 0.875
154 30N 0.4 0.755102
155 A U 0.4 0.865854
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: 40
This union binding pocket(no: 6) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
1 4WBD CIT 1.59363
2 4PPF FLC 2.57143
3 2AWN ADP 2.62467
4 5X2N ALA 2.66667
5 1V1A ADP 2.91262
6 2C3H GLC GLC 3.06122
7 3G5N PB2 3.18725
8 4XDA ADP 3.23625
9 4XDA RIB 3.23625
10 5FJJ MAN 3.38645
11 1XP8 AGS 3.82514
12 2WW4 ADP 3.88693
13 2HW1 ANP 4.02685
14 3LOO B4P 4.38356
15 1GXU 2HP 4.3956
16 2VAR ANP 4.47284
17 4XCP PLM 4.70588
18 2OUA AES 5.31915
19 5O22 C3R 5.53633
20 3QRC SCR 5.73248
21 4C5N ACP 5.7971
22 4C5N PXL 5.7971
23 1JI0 ATP 6.25
24 3ZS7 ATP 6.66667
25 2JG1 ANP 7.27273
26 3B9Q MLI 7.28477
27 5Z21 OXM 7.37052
28 1IZC PYR 7.37463
29 4GO7 THR 7.5
30 2JGV ADP 7.57576
31 3LEK BCW 7.84314
32 3O5N BR0 10.7143
33 4EN4 GT0 11.5538
34 1R0X ATP 11.8881
35 4NTO 1PW 13.0435
36 2BVE PH5 15.126
37 2DT9 THR 20.9581
38 3AB4 THR 21.3483
39 2DTJ THR 21.3483
40 4DE3 DN8 26.2357
Pocket No.: 7; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 11; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 13; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 13) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 14; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 14) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 15; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 15) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 16; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 16) in the query (biounit: 3rs8.bio1) has 63 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 17; Query (leader) PDB : 3RS8; Ligand: ALA TRP LEU PHE GLU ALA; Similar sites found with APoc: 256
This union binding pocket(no: 17) in the query (biounit: 3rs8.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
1 5MT9 SRO None
2 5ET3 60C None
3 1UO4 PIH None
4 4QEK GLC 0.996678
5 1HFU NAG NDG 1.19522
6 1V25 ANP 1.39442
7 5AZ1 NDP 1.41643
8 4XRZ SI6 1.46138
9 4F06 PHB 1.61725
10 6DIO CIT 1.6317
11 5Y24 GLY MET PRO ARG GLY ALA 1.76768
12 4Y9J UCC 1.79283
13 4ZBR DIF 1.79283
14 4ZBR NPS 1.79283
15 1HK8 DGT 1.79283
16 4O1Z MXM 1.79283
17 4XB4 45D 1.97368
18 1JG9 GLC 1.99203
19 1LQA NDP 2.02312
20 6BA2 7KM 2.0339
21 1EYN 2AN 2.14797
22 4EO3 FMN 2.17391
23 6FCX FAD 2.19124
24 3W5N RAM 2.39044
25 2O1V ADP 2.39044
26 5HCY 60D 2.41692
27 1FP1 HCC 2.41935
28 6F5W KG1 2.43902
29 2P3I MNA 2.48447
30 3L1N PLM 2.57732
31 2WQP WQP 2.5788
32 4NFN 2KC 2.589
33 5LOF 70R 2.58964
34 6C1R EFD 2.60664
35 6H21 UD1 2.6087
36 5OHJ 9VE 2.61283
37 3FXU TSU 2.62295
38 5MJA 7O3 2.62295
39 5L83 ASP TRP GLU ILE VAL 2.67857
40 6CB2 OLC 2.73038
41 1XMU ROF 2.76382
42 1XM4 PIL 2.76382
43 1XMY ROL 2.76382
44 1ZQ5 NAP 2.78638
45 1ZQ5 E04 2.78638
46 3NTY 5P3 2.78638
47 3NTY NAP 2.78638
48 6APV 3L4 2.78884
49 1Q7E MET 2.80374
50 2E1T MLC 2.86344
51 3PE2 E1B 2.96736
52 1MZV AMP 2.97872
53 1N0U SO1 2.98805
54 3COW 52H 2.99003
55 6A0S NDP 3.01205
56 4XCL AGS 3.0888
57 5UBG PRT 3.09735
58 3GWT 066 3.11615
59 1L6O SER LEU LYS LEU MET THR THR VAL 3.15789
60 5WXH ALA ARG THR M3L GLN THR ALA 3.1746
61 3G5N PB2 3.18725
62 1LVK MNT BEF 3.18725
63 2Z7I 742 3.18725
64 5ZCM NDP DTT 3.22581
65 1LBF 137 3.23887
66 3WCA FPS 3.28767
67 3QKD HI0 3.31492
68 5Y1G AKB 3.35366
69 3F5O UOC COA 3.37838
70 5NM7 GLY 3.38346
71 1QB7 ADE 3.38983
72 1MI3 NAD 3.41615
73 4MFL MFK 3.47826
74 1J78 VDY 3.49345
75 5EKO N17 3.50404
76 5N81 8Q2 3.51288
77 3V66 D3A 3.52941
78 4MFZ MFK 3.53982
79 4V1T ADP 3.58566
80 3KV8 FAH 3.59712
81 5T79 NDP 3.61446
82 1OPK P16 3.63636
83 1MV8 NAD 3.66972
84 1MUU NAD 3.66972
85 3OFK SAH 3.7037
86 1XSE NDP 3.72881
87 2FXU BID 3.73333
88 5XVG 8FX 3.75427
89 5CSD ACD 3.77358
90 5Z6T NAP 3.79009
91 3WDM ADN 3.83142
92 5FUS DAO 3.83275
93 2WZM NA7 3.88693
94 4EOY ASN ASP TRP LEU LEU PRO SER TYR 3.90625
95 1USF NAP 3.93258
96 1USF FMN 3.93258
97 3O3R NAP 3.98406
98 4MRP GSH 3.98406
99 3CV7 NAP 4
100 3CV7 C2U 4
101 5B4B LP5 4.03226
102 1LEK GLU GLN TYR LYS PHE TYR SER VAL 4.0404
103 4D04 FAD 4.05904
104 4D04 NAP 4.05904
105 1YNQ NDP 4.10095
106 1QV1 CZH 4.10256
107 1JF0 CZH 4.10256
108 1ZGD NAP 4.16667
109 5G57 6M5 4.16667
110 2Z48 NGA 4.16667
111 3R9V DXC 4.1958
112 5NTP 98E 4.20168
113 3WCZ NAP 4.22078
114 4RHP PEF 4.25532
115 3S6X SIA GAL BGC 4.30769
116 5N26 CPT 4.3956
117 6BMM OLB 4.43686
118 5NWI TYR PHE SER SEP ASN 4.58015
119 5LXI GLU ASP GLU ASP PHE GLU ILE LEU SEP LEU 4.58167
120 4U60 SIA 4.64286
121 4U60 SIA GAL BGC NGA GAL 4.64286
122 4U60 SIA GAL NGA 4.64286
123 1VP5 NAP 4.69799
124 1N6B DMZ 4.86258
125 5K52 OCD 4.90566
126 5TDF 7A3 4.93827
127 5U97 PIT 4.98008
128 4INW 1EY 5
129 2GU8 796 5.04451
130 3KPX CZH 5.05051
131 4O4K 2PK 5.05952
132 5AAV GW5 5.15873
133 5JH2 A2P 5.16129
134 4IPE ANP 5.17928
135 4IVG ANP 5.17928
136 3G6K POP 5.19481
137 3G6K FAD 5.19481
138 3CAQ NDP 5.21472
139 3N2S FMN 5.22088
140 4UYW H1S 5.22193
141 3SJK LYS PRO VAL LEU ARG THR ALA 5.26316
142 3SM2 478 5.30303
143 5VJN ADE 5.34759
144 5VJN IR8 5.34759
145 4JD3 PLM 5.38244
146 4JD3 COA 5.38244
147 1BKJ FMN 5.41667
148 1F5V FMN 5.41667
149 2WSI FAD 5.55556
150 5C1M OLC 5.6
151 5CUQ NSC 5.61798
152 3ND6 ATP 5.84795
153 5D9J 0N8 5.88235
154 2PID YSA 5.89888
155 4RW3 TDA 5.96026
156 3I59 N6R 6.0241
157 1VBJ NAP 6.04982
158 5G5G FAD 6.11354
159 1ZSQ PIB 6.1753
160 5KK4 44E 6.25
161 3H7U NAP 6.26866
162 3R1V AZB 6.29921
163 4Q0A 4OA 6.3745
164 3TGE TGE 6.44172
165 1L1Q 9DA 6.45161
166 6BMS PLM 6.45161
167 2ZCQ B65 6.48464
168 1JGS SAL 6.52174
169 1LSH PLD 6.58307
170 4TWP AXI 6.64207
171 1FRB ZST 6.66667
172 1BWO LPC 6.66667
173 2HK5 1BM 6.66667
174 3KFC 61X 6.71937
175 3HBV ALA LYS ALA SER GLN ALA ALA 6.92641
176 4PYW ACE THR THR ALA ILE NH2 6.93069
177 1T0S BML 6.97674
178 4BNU 9KQ 7.0632
179 4P86 5GP 7.10383
180 2BGS NDP 7.26744
181 2GSQ GBI 7.42574
182 3GF2 SAL 7.53425
183 5KHD C2E 7.69231
184 1UVC STE 7.69231
185 1RE0 AFB 7.69231
186 3E7O 35F 7.77778
187 5HDJ FMN 7.7821
188 5TO8 7FM 7.80142
189 4JTA NAP 7.80781
190 3RV5 DXC 7.86517
191 1ZUA NAP 7.88644
192 1ZUA TOL 7.88644
193 3EAU NDP 7.95107
194 3EAU PDN 7.95107
195 3G58 988 7.96813
196 3G4G D71 7.96813
197 1XON PIL 7.96813
198 1WN3 HXC 8.08823
199 6GL8 F3Q 8.13953
200 5TVI MYR 8.69565
201 1EXB NDP 8.73786
202 5W3Y IHP 8.80682
203 1UHK CZN 8.90052
204 1UUY PPI 8.98204
205 6FCH PRP 8.98876
206 5MW4 5JU 9.28144
207 1G27 BB1 9.52381
208 2FV5 541 9.57854
209 5OVV ACE ILE GLU SER THR GLU ILE 9.7561
210 5V4R MGT 9.87654
211 1MHC FME TYR PHE ILE ASN ILE LEU THR LEU 9.92908
212 6GH1 ARG LEU PRO ALA LYS ALA PRO LEU LEU 10
213 5LX9 OLB 10.0977
214 5U98 1KX 10.101
215 5T70 THR SER ASN LEU GLN GLU GLN ILE GLY TRP 10.101
216 5XS3 VAL ARG SER ARG ARG CYS LEU ARG LEU 10.2041
217 1KJM ALA GLN PHE SER ALA SER ALA SER ARG 10.5263
218 5OCA 9QZ 10.5991
219 1DQE BOM 10.9489
220 4J6W CTP 10.9756
221 1R1Q ACE ARG GLU PTR VAL ASN VAL 11
222 5E6O TRP GLU GLU LEU 11.0169
223 1L0I PSR 11.5385
224 1MWH GTG 11.5538
225 5WHT SIA GAL GLC 11.5942
226 2D5X L35 11.6438
227 1EKO NAP 11.746
228 1EKO I84 11.746
229 4URX FK1 11.8919
230 5O0B 9FE 12.3457
231 2GWH PCI 13.0872
232 6MPT C30 13.6364
233 4M5S GLY GLU ARG THR ILE PRO ILE THR ARG GLU 13.7931
234 6C8X BVR 14.1414
235 6GMN F4E 14.1975
236 2NV4 SAM 14.2857
237 2HFP NSI 14.2857
238 1D5Z ACE ALC ARG ALA ODA SER LEU NH2 14.6444
239 4WNB 4BN 14.7287
240 5XJ7 87O 14.9254
241 5XJ8 NKO 14.9254
242 1PZM 5GP 15.6398
243 4OGQ 7PH 16.2162
244 3KP6 SAL 16.5563
245 4O4Z N2O 16.8831
246 3WFD AXO 17.3333
247 5ZCO PEK 17.3913
248 5Z84 PGV 17.3913
249 5Z84 TGL 17.3913
250 5ZCO PGV 17.3913
251 5Z84 CHD 17.3913
252 1CLU DBG 17.4699
253 4P83 U5P 17.5824
254 2VWA PTY 17.8218
255 5W3X IHP 18.75
256 4FOU C2E 20.8333
Pocket No.: 18; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 18) in the query (biounit: 3rs8.bio1) has 31 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 19; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 19) in the query (biounit: 3rs8.bio1) has 31 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 20; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 20) in the query (biounit: 3rs8.bio1) has 31 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 21; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 21) in the query (biounit: 3rs8.bio1) has 31 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 22; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 22) in the query (biounit: 3rs8.bio1) has 31 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 23; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: 124
This union binding pocket(no: 23) in the query (biounit: 3rs8.bio1) has 31 residues
No: Leader PDB Ligand Sequence Similarity
1 1ZEI CRS None
2 4WG0 CHD None
3 5YRG BGC GLC 1.40845
4 5YRF GLC GLC 1.40845
5 1GJW GLC 1.59363
6 3GDN MXN 1.59363
7 4D1J DGJ 1.59363
8 4F06 PHB 1.61725
9 2CIX CEJ 1.67224
10 2BMB PMM 1.79283
11 5G6U TRP 1.91571
12 2HZL PYR 1.91781
13 1W62 PYC 1.93237
14 1RTF BEN 1.98413
15 3K5I AIR 1.98511
16 5ZXD ATP 1.99203
17 2CFC KPC 2
18 6APL C5P 2.13904
19 5IUY BOG 2.20751
20 3W5N RAM 2.39044
21 3UNG ADP 2.39044
22 4G86 BNT 2.46479
23 3E7S AT2 2.5522
24 2Q0L NAP 2.57235
25 3ITJ CIT 2.66272
26 4IP7 FLC 2.78884
27 3N2O AG2 2.78884
28 3LL5 IP8 2.81124
29 5YRJ BGC GLC 2.8169
30 5OSW DIU 3.18725
31 3A70 NPO 3.18725
32 3A06 NDP 3.19149
33 5EO8 TFU 3.21543
34 3GUZ PAF 3.40909
35 5HTX ADP 3.41686
36 2HFK E4H 3.44828
37 1T32 OHH 3.57143
38 2BDG PBZ 3.58744
39 3CEV ARG 3.67893
40 4GN8 ASO 3.67893
41 4CP8 MLI 3.6961
42 5ZI9 FLC 3.84615
43 3JUC PCA 3.92157
44 2FJK 13P 3.93443
45 4MRP GSH 3.98406
46 5IFK HPA 4.48718
47 5HWK BEZ 4.58333
48 2YVJ NAI 4.65686
49 2RI1 GLP 4.68085
50 3WH2 FLC 4.7619
51 2HYR BGC GLC 4.91803
52 2NUO BGC 4.91803
53 2HYQ MAN MAN 4.91803
54 4MGA 27L 5.09804
55 1S14 NOV 5.15464
56 1XZ3 ICF 5.17241
57 4IU6 FZ1 5.20833
58 5BQS 4VN 5.26316
59 5UC9 MYR 5.30973
60 1NXJ TLA 5.46448
61 5C1M OLC 5.6
62 4HE2 AMP 5.6213
63 5VOP C2F 5.74324
64 5OLK DTP 5.81395
65 4RW3 PLM 5.96026
66 4RW3 TDA 5.96026
67 4UP3 NDP 6.05096
68 1LNX URI 6.17284
69 2OCI TYC 6.29921
70 4K79 GAL A2G 6.36364
71 4Q0A 4OA 6.3745
72 5HJQ I3P 6.38298
73 3NOJ PYR 6.72269
74 5Z5I XYP 6.814
75 3GFS FMN 6.89655
76 5HCT 61P 6.92124
77 6B74 BEN 6.99588
78 5X13 HC4 7.17131
79 4NFE BEN 7.173
80 1SW0 PGA 7.25806
81 1USR SIA WIA 7.37052
82 1USR SIA 7.37052
83 1SZO CAX 7.393
84 3LXI CAM 7.60095
85 1LQY BB2 7.6087
86 3N7S 3N7 7.82609
87 2WDQ TEO 7.82609
88 3RV5 DXC 7.86517
89 5ZBL AMP 7.88177
90 3G58 988 7.96813
91 3CYI ATP 8.18182
92 1KJ8 GAR 8.18414
93 5XJD 87L 8.63636
94 5TVI O8N 8.69565
95 5TVI MYR 8.69565
96 3MG9 GHP 3MY 3FG GHP GHP OMY 3FG 8.84354
97 5NC1 NAG 8.86076
98 5BSZ THM 9.6
99 4JX1 CAH 9.63855
100 5FII PHE 9.80392
101 5V4R MGT 9.87654
102 5LX9 OLB 10.0977
103 1XF1 CIT 10.1594
104 1NU4 MLA 10.3093
105 5OCA 9QZ 10.5991
106 2PKA BEN 11.1842
107 2Y69 CHD 11.4286
108 1L0I PSR 11.5385
109 2JE7 XMM 12.1339
110 1ECM TSA 12.844
111 3KP6 SAL 16.5563
112 4K7O EKZ 16.6667
113 4O4Z N2O 16.8831
114 1VL1 CIT 17.1315
115 5Z84 CHD 17.3913
116 5W97 CHD 17.3913
117 5ZCO CHD 17.3913
118 4V1F BQ1 17.4419
119 3ZQE DXC 17.7049
120 6FLZ MMA 19.4444
121 2V7Q ADP 20
122 4RJD TFP 21.2121
123 3RO7 TDR 35.0943
124 3ROE THM 35.0943
Pocket No.: 24; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 24) in the query (biounit: 3rs8.bio1) has 31 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 25; Query (leader) PDB : 3RS8; Ligand: APR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 25) in the query (biounit: 3rs8.bio1) has 31 residues
No: Leader PDB Ligand Sequence Similarity
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