-->
Receptor
PDB id Resolution Class Description Source Keywords
3QDV 1.3 Å NON-ENZYME: BINDING STRUCTURE OF THE ORTHORHOMBIC FORM OF THE BOLETUS EDULIS LEC COMPLEX WITH N-ACETYL GLUCOSAMINE AND N-ACETYL GALACTOSAMIN BOLETUS EDULIS BOLETUS EDULIS LECTIN MUSHROOM T-ANTIGEN DISACCHARIDE N-GLUCOSAMINE N-ACETYL GALACTOSAMINE CARBOHYDRATE SUGAR BISUGAR BINDING PROTEIN
Ref.: STRUCTURE OF A LECTIN WITH ANTITUMORAL PROPERTIES I BOLETE (BOLETUS EDULIS) MUSHROOMS. GLYCOBIOLOGY V. 21 1000 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
A2G A:144;
B:144;
Valid;
Valid;
none;
none;
submit data
221.208 C8 H15 N O6 CC(=O...
NDG A:145;
B:145;
Valid;
Valid;
none;
none;
submit data
221.208 C8 H15 N O6 CC(=O...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3QDV 1.3 Å NON-ENZYME: BINDING STRUCTURE OF THE ORTHORHOMBIC FORM OF THE BOLETUS EDULIS LEC COMPLEX WITH N-ACETYL GLUCOSAMINE AND N-ACETYL GALACTOSAMIN BOLETUS EDULIS BOLETUS EDULIS LECTIN MUSHROOM T-ANTIGEN DISACCHARIDE N-GLUCOSAMINE N-ACETYL GALACTOSAMINE CARBOHYDRATE SUGAR BISUGAR BINDING PROTEIN
Ref.: STRUCTURE OF A LECTIN WITH ANTITUMORAL PROPERTIES I BOLETE (BOLETUS EDULIS) MUSHROOMS. GLYCOBIOLOGY V. 21 1000 2011
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 3QDV - NDG C8 H15 N O6 CC(=O)N[C@....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 3QDV - NDG C8 H15 N O6 CC(=O)N[C@....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 298 families.
1 3QDV - NDG C8 H15 N O6 CC(=O)N[C@....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: A2G; Similar ligands found: 105
No: Ligand ECFP6 Tc MDL keys Tc
1 NGA 1 1
2 NAG 1 1
3 A2G 1 1
4 BM3 1 1
5 HSQ 1 1
6 NDG 1 1
7 BGN 0.638298 0.888889
8 SIZ 0.630435 0.906977
9 YX1 0.625 0.65
10 STZ 0.612245 0.65
11 4QY 0.591837 0.735849
12 BMX 0.591837 0.735849
13 16G 0.591837 0.735849
14 9C1 0.58 0.886364
15 SNG 0.5625 0.866667
16 NGS 0.54902 0.661017
17 NDG NAG 0.54386 0.833333
18 CBS 0.54386 0.833333
19 NAG GDL 0.54386 0.833333
20 CBS CBS 0.54386 0.833333
21 ASG 0.538462 0.661017
22 BG8 0.537037 0.906977
23 MAG 0.530612 0.909091
24 2F8 0.530612 0.909091
25 NDG GAL 0.517857 0.888889
26 NLC 0.517857 0.888889
27 GAL NDG 0.517857 0.888889
28 NAG A2G 0.517241 0.833333
29 4V5 0.517241 0.829787
30 NAG NGA 0.517241 0.833333
31 4UZ 0.508475 0.808511
32 NAG NAG NAG NAG NDG 0.508197 0.816327
33 NDG NAG NAG NAG 0.508197 0.816327
34 NAG NAG NDG 0.508197 0.816327
35 NAG NAG NDG NAG 0.508197 0.816327
36 CTO 0.508197 0.816327
37 NDG NAG NAG NDG 0.508197 0.816327
38 NAG NAG NAG NDG 0.508197 0.816327
39 NDG NAG NAG 0.508197 0.816327
40 NAG NAG NAG NAG NAG 0.508197 0.816327
41 NAG NAG NAG NAG NAG NAG 0.508197 0.816327
42 NAG NAG NAG NAG NAG NAG NAG NAG 0.508197 0.816327
43 MQG 0.5 0.698113
44 NBG 0.5 0.951219
45 GAL NGA 0.491228 0.888889
46 A2G GAL 0.491228 0.888889
47 GAL A2G 0.491228 0.888889
48 AMU 0.490909 0.930233
49 NG1 0.490566 0.754717
50 GN1 0.490566 0.754717
51 NAG GAL 0.474576 0.888889
52 GAL NAG 0.474576 0.888889
53 NAG FUC 0.474576 0.866667
54 NAG GAL NAG 0.455882 0.833333
55 3YW 0.448276 0.930233
56 GLA GAL NAG 0.446154 0.888889
57 MAN BMA NAG 0.446154 0.888889
58 NGA GAL 0.428571 0.869565
59 FUC GAL NAG 0.426471 0.869565
60 GAL NAG FUC 0.426471 0.869565
61 DR2 0.426471 0.869565
62 NAG GAL FUC 0.426471 0.869565
63 NDG GAL FUC 0.426471 0.869565
64 FUC GAL NDG 0.426471 0.869565
65 FUL GAL NAG 0.426471 0.869565
66 G6S NAG 0.426471 0.645161
67 TNR 0.42623 0.833333
68 GYU 0.42623 0.740741
69 GAL NGA A2G 0.424242 0.833333
70 NAG BDP 0.421875 0.851064
71 NAG MBG 0.419355 0.851064
72 NGA GAL BGC 0.41791 0.888889
73 NAG NDG 0.415385 0.784314
74 NAG NAG 0.415385 0.784314
75 AZC 0.415094 0.795918
76 SN5 SN5 0.412698 0.705882
77 A2G MBG 0.412698 0.851064
78 MBG A2G 0.412698 0.851064
79 HS2 0.411765 0.8125
80 5AX 0.411765 0.866667
81 NAG MAN BMA 0.411765 0.888889
82 6ZC 0.409091 0.655738
83 LEC 0.409091 0.655738
84 TCG 0.408451 0.689655
85 GAL BGC NAG GAL 0.408451 0.888889
86 NAG MAN 0.40625 0.851064
87 WOO 0.404762 0.7
88 MAN 0.404762 0.7
89 GAL 0.404762 0.7
90 BGC 0.404762 0.7
91 BMA 0.404762 0.7
92 GLA 0.404762 0.7
93 ALL 0.404762 0.7
94 GLC 0.404762 0.7
95 GXL 0.404762 0.7
96 GIV 0.404762 0.7
97 NAG AMU 0.402778 0.8
98 NAG MUB 0.402778 0.8
99 NAG A2G GAL 0.402778 0.833333
100 A2G GAL FUC 0.4 0.869565
101 FUC GLA A2G 0.4 0.869565
102 DR3 0.4 0.869565
103 A2G GLA FUC 0.4 0.869565
104 NGA GAL FUC 0.4 0.869565
105 FUC GAL A2G 0.4 0.869565
Ligand no: 2; Ligand: NDG; Similar ligands found: 105
No: Ligand ECFP6 Tc MDL keys Tc
1 NGA 1 1
2 NAG 1 1
3 A2G 1 1
4 BM3 1 1
5 HSQ 1 1
6 NDG 1 1
7 BGN 0.638298 0.888889
8 SIZ 0.630435 0.906977
9 YX1 0.625 0.65
10 STZ 0.612245 0.65
11 4QY 0.591837 0.735849
12 BMX 0.591837 0.735849
13 16G 0.591837 0.735849
14 9C1 0.58 0.886364
15 SNG 0.5625 0.866667
16 NGS 0.54902 0.661017
17 NDG NAG 0.54386 0.833333
18 CBS 0.54386 0.833333
19 NAG GDL 0.54386 0.833333
20 CBS CBS 0.54386 0.833333
21 ASG 0.538462 0.661017
22 BG8 0.537037 0.906977
23 MAG 0.530612 0.909091
24 2F8 0.530612 0.909091
25 NDG GAL 0.517857 0.888889
26 NLC 0.517857 0.888889
27 GAL NDG 0.517857 0.888889
28 NAG A2G 0.517241 0.833333
29 4V5 0.517241 0.829787
30 NAG NGA 0.517241 0.833333
31 4UZ 0.508475 0.808511
32 NAG NAG NAG NAG NDG 0.508197 0.816327
33 NDG NAG NAG NAG 0.508197 0.816327
34 NAG NAG NDG 0.508197 0.816327
35 NAG NAG NDG NAG 0.508197 0.816327
36 CTO 0.508197 0.816327
37 NDG NAG NAG NDG 0.508197 0.816327
38 NAG NAG NAG NDG 0.508197 0.816327
39 NDG NAG NAG 0.508197 0.816327
40 NAG NAG NAG NAG NAG 0.508197 0.816327
41 NAG NAG NAG NAG NAG NAG 0.508197 0.816327
42 NAG NAG NAG NAG NAG NAG NAG NAG 0.508197 0.816327
43 MQG 0.5 0.698113
44 NBG 0.5 0.951219
45 GAL NGA 0.491228 0.888889
46 A2G GAL 0.491228 0.888889
47 GAL A2G 0.491228 0.888889
48 AMU 0.490909 0.930233
49 NG1 0.490566 0.754717
50 GN1 0.490566 0.754717
51 NAG GAL 0.474576 0.888889
52 GAL NAG 0.474576 0.888889
53 NAG FUC 0.474576 0.866667
54 NAG GAL NAG 0.455882 0.833333
55 3YW 0.448276 0.930233
56 GLA GAL NAG 0.446154 0.888889
57 MAN BMA NAG 0.446154 0.888889
58 NGA GAL 0.428571 0.869565
59 FUC GAL NAG 0.426471 0.869565
60 GAL NAG FUC 0.426471 0.869565
61 DR2 0.426471 0.869565
62 NAG GAL FUC 0.426471 0.869565
63 NDG GAL FUC 0.426471 0.869565
64 FUC GAL NDG 0.426471 0.869565
65 FUL GAL NAG 0.426471 0.869565
66 G6S NAG 0.426471 0.645161
67 TNR 0.42623 0.833333
68 GYU 0.42623 0.740741
69 GAL NGA A2G 0.424242 0.833333
70 NAG BDP 0.421875 0.851064
71 NAG MBG 0.419355 0.851064
72 NGA GAL BGC 0.41791 0.888889
73 NAG NDG 0.415385 0.784314
74 NAG NAG 0.415385 0.784314
75 AZC 0.415094 0.795918
76 SN5 SN5 0.412698 0.705882
77 A2G MBG 0.412698 0.851064
78 MBG A2G 0.412698 0.851064
79 HS2 0.411765 0.8125
80 5AX 0.411765 0.866667
81 NAG MAN BMA 0.411765 0.888889
82 6ZC 0.409091 0.655738
83 LEC 0.409091 0.655738
84 TCG 0.408451 0.689655
85 GAL BGC NAG GAL 0.408451 0.888889
86 NAG MAN 0.40625 0.851064
87 WOO 0.404762 0.7
88 MAN 0.404762 0.7
89 GAL 0.404762 0.7
90 BGC 0.404762 0.7
91 BMA 0.404762 0.7
92 GLA 0.404762 0.7
93 ALL 0.404762 0.7
94 GLC 0.404762 0.7
95 GXL 0.404762 0.7
96 GIV 0.404762 0.7
97 NAG AMU 0.402778 0.8
98 NAG MUB 0.402778 0.8
99 NAG A2G GAL 0.402778 0.833333
100 A2G GAL FUC 0.4 0.869565
101 FUC GLA A2G 0.4 0.869565
102 DR3 0.4 0.869565
103 A2G GLA FUC 0.4 0.869565
104 NGA GAL FUC 0.4 0.869565
105 FUC GAL A2G 0.4 0.869565
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3QDV; Ligand: NDG; Similar sites found with APoc: 123
This union binding pocket(no: 1) in the query (biounit: 3qdv.bio1) has 11 residues
No: Leader PDB Ligand Sequence Similarity
1 2OL1 UMP None
2 5J62 FMN None
3 5ETR 5RW None
4 5ETR APC None
5 1F5V FMN None
6 4PO2 ASN ARG LEU LEU LEU THR GLY None
7 1YP0 PEF None
8 3QDL FMN None
9 1LQY BB2 None
10 5J6C FMN 1.3986
11 2XNJ FAD 2.0979
12 1GRO ICT 2.7972
13 1I0S NAP 2.7972
14 6F4T OGA 2.7972
15 4P83 U5P 2.7972
16 4ZFL 4NK 2.7972
17 5Z21 NAI 2.7972
18 2WAT COA 3.27869
19 1QR0 COA 3.4965
20 4MRT COA 3.4965
21 5OGX FAD 3.4965
22 6MB9 COA 3.4965
23 6MB9 NMY 3.4965
24 4U9U FAD 3.4965
25 2VUT NAD 3.4965
26 5MF5 C2E 3.4965
27 1FIW PBZ 3.4965
28 6EBQ FMN 4.1958
29 4CS4 AXZ 4.1958
30 2YVK MRU 4.1958
31 1XTT U5P 4.1958
32 1ZCH FMN 4.1958
33 1KRH FAD 4.1958
34 4OOP DUP 4.8951
35 1DDG FAD 4.8951
36 5Y6Q FAD 4.8951
37 2QX0 APC 4.8951
38 5CSD ACD 4.8951
39 4GV8 DUP 4.8951
40 6AIX A3P 4.8951
41 1SQA UI1 4.8951
42 4G1V FAD 4.8951
43 4QC6 30N 4.8951
44 2WTX UDP 4.8951
45 6BMN PAP 5.59441
46 3OZV FAD 5.59441
47 5A8Y VBM 5.59441
48 1PVC ILE SER GLU VAL 5.59441
49 3HV8 C2E 5.59441
50 2O3Z AI7 5.59441
51 1LDN NAD 5.59441
52 4R57 ACO 5.59441
53 4EO3 FMN 6.29371
54 2ZCQ B65 6.29371
55 2VN9 GVD 6.29371
56 1QL9 ZEN 6.29371
57 3G6N MET ALA SER 6.29371
58 3WG6 NDP 6.29371
59 6BN0 NAG NAG NAG NAG NAG NAG 6.32911
60 4PYW ACE THR THR ALA ILE NH2 6.99301
61 1FND A2P 6.99301
62 1FND FAD 6.99301
63 3P48 DUP 6.99301
64 1BXK NAD 6.99301
65 3GFZ C2E 6.99301
66 1ICV FMN 6.99301
67 6BA2 7KM 7.69231
68 2C43 COA 7.69231
69 3S6X SIA GAL BGC 7.69231
70 3O84 HTJ 7.69231
71 4ZRN NAD 7.69231
72 4LJ3 C2E 7.69231
73 3N2S FMN 7.69231
74 2HJR APR 7.69231
75 4YSW NAI 8.39161
76 4YSW FAD 8.39161
77 4FOU C2E 8.39161
78 4FOJ C2E 8.39161
79 1FIQ FAD 9.09091
80 2RC5 FAD 9.09091
81 4HMX FMN 9.09091
82 2ZBA COA 9.09091
83 4HMX WUB 9.09091
84 1TLL NAP 9.09091
85 1HFU NAG NDG 9.09091
86 1TLL FAD 9.09091
87 1F20 FAD 9.09091
88 1GP2 GDP 9.09091
89 3JQQ FAD 9.09091
90 5LKT BCO 9.09091
91 1QFY FAD 9.79021
92 1QFY NAP 9.79021
93 5H5J FAD 9.79021
94 3MHP FAD 9.79021
95 4DQL FAD 9.79021
96 4DQL NAP 9.79021
97 4QVB F42 9.79021
98 1W6U HXC 10.4895
99 5N5U 7N8 10.4895
100 1GAW FAD 11.1888
101 5VKM GAL SIA 11.1888
102 1Z8O DEB 11.1888
103 3VO1 FAD 11.8881
104 6ER9 FAD 11.8881
105 3VCY UD1 11.8881
106 3GB5 FMN 11.8881
107 2QQC AG2 12.5
108 3CZ7 ACO 12.5874
109 2ZFN ACO 12.5874
110 2VBU CDP 13.9706
111 4HMT NNV 13.986
112 1SM4 FAD 14.6853
113 2RCU BUJ 14.6853
114 1EWY FAD 14.6853
115 3NRZ FAD 15.3846
116 5EGM 5NY 15.3846
117 2VH6 GSV 16.0839
118 4BTI 7R9 16.0839
119 2D2F ADP 16.7832
120 3UOY FAD 17.4825
121 3UOY NAP 17.4825
122 2WOE AR6 17.4825
123 1BKJ FMN 25.8741
Pocket No.: 2; Query (leader) PDB : 3QDV; Ligand: NDG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3qdv.bio1) has 11 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 3QDV; Ligand: NDG; Similar sites found with APoc: 98
This union binding pocket(no: 3) in the query (biounit: 3qdv.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 3V49 PK0 None
2 5H4J FKM None
3 5UBG PRT None
4 3FS1 MYR None
5 1QAW TRP None
6 2P4T NAP None
7 2WC1 FMN None
8 3QMN COA None
9 6C7R EO4 None
10 3QFS FAD 1.3986
11 3FV1 DYH 1.3986
12 3FJO FAD 1.3986
13 1TMM HHR 2.0979
14 1CM0 COA 2.0979
15 1I0S FMN 2.7972
16 6CZ3 FLJ 2.7972
17 5H5F SAM 2.7972
18 5O2D 9HH 2.7972
19 4P86 5GP 2.7972
20 4LAE NAP 3.4965
21 4LAE 1VM 3.4965
22 5GWX SAM 3.4965
23 5GWX SAR 3.4965
24 2ZAT NAP 3.4965
25 4XDA ADP 3.4965
26 4XDA RIB 3.4965
27 1KRP DT DT PST 3.4965
28 4WQM FAD 4.1958
29 1LH0 PRP 4.1958
30 4N82 FMN 4.1958
31 2VOT NHV 4.1958
32 2PS1 PRP 4.1958
33 5YFT RI2 4.8951
34 3A7R LAQ 4.8951
35 5N2D 8J8 4.8951
36 5FLJ QUE 4.8951
37 6G9I CXX 4.8951
38 3N3T C2E 5.59441
39 1KOR ANP 5.59441
40 1KOR ARG 5.59441
41 1KOR SIN 5.59441
42 3ILR IXD 5.59441
43 3ILR SGN 5.59441
44 3CQD ATP 5.59441
45 3DWB RDF 5.59441
46 1V5Y 4HC 5.59441
47 5K9B FMN 5.59441
48 3VZS NAP 5.59441
49 2VZ6 FEF 6.29371
50 5GRM 1SY 6.29371
51 4C2C ALA VAL PRO ALA 6.29371
52 1PN0 FAD 6.99301
53 1PN0 IPH 6.99301
54 1QGQ UDP 6.99301
55 2VGK REZ 6.99301
56 5N9X 8QN 6.99301
57 6GQM F8H 6.99301
58 6MPT C30 7.69231
59 1T9M FMN 7.69231
60 2V0C ANZ 7.69231
61 5FA8 SAM 7.69231
62 1ERB ETR 7.69231
63 6GAQ FMN 7.69231
64 1TDF NAP 8.39161
65 3AQV TAK 8.39161
66 3WCA FPS 8.39161
67 1L6O SER LEU LYS LEU MET THR THR VAL 8.42105
68 6DWD HDV 9.09091
69 6DWD GTP 9.09091
70 3JQQ A2P 9.09091
71 4M5S GLY GLU ARG THR ILE PRO ILE THR ARG GLU 9.1954
72 5XFV FMN 9.79021
73 3FED BIX 9.79021
74 3SMA ACO 9.79021
75 1PZG A3D 10.4895
76 5JCA FAD 10.4895
77 3MQG ACO 10.4895
78 5XJ7 87O 10.4895
79 4YRY FAD 10.4895
80 3ZLR X0B 11.1888
81 1GEE NAD 11.1888
82 4JWH SAH 11.1888
83 4EIL CB3 11.1888
84 6ER9 NAP 11.8881
85 3ZXR P3S 11.8881
86 3ZXR IQ1 11.8881
87 1N13 AG2 12.3894
88 3HRD FAD 13.2867
89 2E1T MLC 13.2867
90 3WR7 COA 13.2867
91 1T3Q FAD 13.986
92 4HMT FMN 13.986
93 4P5Z Q7M 13.986
94 5KVM THR TYR PHE ALA VAL LEU MET VAL SER 14.6853
95 5O96 SAM 14.6853
96 1UNH IXM 14.6853
97 1FFU FAD 16.0839
98 3ZZQ TRP 18.4615
Pocket No.: 4; Query (leader) PDB : 3QDV; Ligand: NDG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 3qdv.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 3QDV; Ligand: A2G; Similar sites found with APoc: 96
This union binding pocket(no: 5) in the query (biounit: 3qdv.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 5ZZ6 NAD None
2 1T0I FMN None
3 4LTN FMN None
4 3S2Y FMN 2.7972
5 4XJ7 ADN 2.7972
6 4XFM THE 2.7972
7 3B6C SDN 2.7972
8 3CBG SAH 3.01724
9 5MQW GTP 3.4965
10 5MQW ATP 3.4965
11 1GAR U89 3.4965
12 3AKI AH8 3.4965
13 1KNM LAT 3.84615
14 2Z9C DTC 4.1958
15 2Z9C FMN 4.1958
16 3GF4 FAD 4.1958
17 5M3Z PLP 4.1958
18 5M3Z PY6 4.1958
19 5M3Z NLE 4.1958
20 5EW9 5VC 4.1958
21 3GF4 UPG 4.1958
22 5OCM NAP 4.1958
23 4N65 FMN 4.71698
24 4C0X FMN 4.8951
25 2HF9 GSP 4.8951
26 3SVL FMN 4.8951
27 5HW4 SAM 4.8951
28 4UHL VFV 4.8951
29 5FLJ QUE 4.8951
30 1T5B FMN 4.97512
31 1NU4 MLA 5.15464
32 4M7V RAR 5.59441
33 4M7V NAP 5.59441
34 2YBQ UP2 5.59441
35 2YBQ SAH 5.59441
36 3HDY FAD 5.59441
37 3HDY GDU 5.59441
38 3HDY FDA 5.59441
39 1J3I WRA 5.59441
40 3SUD SUE 5.59441
41 6BQK Z1E 5.59441
42 2XCF BBQ 5.59441
43 4PTZ FMN 5.75916
44 1PJS SAH 6.29371
45 1ZPT FAD 6.29371
46 5XHA FRU 6.29371
47 1E5F PLP 6.29371
48 1UCN ADP 6.29371
49 3IA4 NDP 6.29371
50 1ST0 GTG 6.99301
51 5UFN SAH 6.99301
52 5X30 7XF 6.99301
53 5X2Z 3LM 6.99301
54 5X30 4LM 6.99301
55 2QBU SAH 6.99301
56 4UOH ADP 6.99301
57 4JLS 3ZE 6.99301
58 3CR3 ADP 7.43802
59 5HDJ FMN 7.69231
60 3N2S FMN 7.69231
61 1WD4 AHR 7.69231
62 3JSX FAD 8.39161
63 6GEW SFG 8.39161
64 6GEW SAH 8.39161
65 1NRL SRL 8.39161
66 3HIW C2X 8.39161
67 6MJF SAH 8.39161
68 4M37 SAH 9.79021
69 1V9A SAH 9.79021
70 5LOG SAH 9.79021
71 2OYS FMN 10.4895
72 4R81 FMN 10.4895
73 5LMC FMN 10.4895
74 2Q9U FMN 10.4895
75 2NXE SAM 11.1888
76 5TPR NAD 11.8881
77 2O07 MTA 11.8881
78 2O07 SPD 11.8881
79 1QRD FAD 13.2867
80 5K0A FAD 13.986
81 2BII MTV 14.6853
82 6BSW UDP 14.6853
83 6BSW CE6 14.6853
84 2I0K FAD 14.6853
85 2H7C SIA 15.3846
86 4ONQ SFG 15.3846
87 1E5D FMN 18.8811
88 2GUD MAN 21.3115
89 2GUC MAN 21.3115
90 2NUO BGC 21.3115
91 2GUD BMA 21.3115
92 2HYR BGC GLC 21.3115
93 2NU5 NAG 21.3115
94 1BKJ FMN 25.8741
95 2FLI DX5 26.5734
96 4M38 SAH 28.5714
Pocket No.: 6; Query (leader) PDB : 3QDV; Ligand: A2G; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 3qdv.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 3QDV; Ligand: A2G; Similar sites found with APoc: 15
This union binding pocket(no: 7) in the query (biounit: 3qdv.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 5ZW3 SAH None
2 5TVA AMP 1.3986
3 1F3F D4D 2.0979
4 1F3F D4T 2.0979
5 3L9W FMN 3.4965
6 3APT FAD 3.4965
7 2ZFZ ARG 3.79747
8 3SJK LYS PRO VAL LEU ARG THR ALA 4.1958
9 4C0X AQN 4.8951
10 3VYW SAM 4.8951
11 4UUG PXG 6.29371
12 5N0O SAM 7.69231
13 2PWY SAH 13.986
14 2ZW5 COA 15.3846
15 3DUW SAH 21.6783
Pocket No.: 8; Query (leader) PDB : 3QDV; Ligand: A2G; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 3qdv.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 3QDV; Ligand: NDG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 3qdv.bio2) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 3QDV; Ligand: NDG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 3qdv.bio2) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 11; Query (leader) PDB : 3QDV; Ligand: A2G; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 3qdv.bio2) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 3QDV; Ligand: A2G; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 3qdv.bio2) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 13; Query (leader) PDB : 3QDV; Ligand: NDG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 13) in the query (biounit: 3qdv.bio3) has 11 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 14; Query (leader) PDB : 3QDV; Ligand: NDG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 14) in the query (biounit: 3qdv.bio3) has 11 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 15; Query (leader) PDB : 3QDV; Ligand: A2G; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 15) in the query (biounit: 3qdv.bio3) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 16; Query (leader) PDB : 3QDV; Ligand: A2G; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 16) in the query (biounit: 3qdv.bio3) has 9 residues
No: Leader PDB Ligand Sequence Similarity
APoc FAQ
Feedback