Receptor
PDB id Resolution Class Description Source Keywords
3PEV 2.5 Å EC: 3.6.4.13 S. CEREVISIAE DBP5 L327V C-TERMINAL DOMAIN BOUND TO GLE1 AND SACCHAROMYCES CEREVISIAE RECA HEAT DEAD-BOX ATPASE HELICASE MRNA EXPORT NUCLEARHYDROLASE
Ref.: A CONSERVED MECHANISM OF DEAD-BOX ATPASE ACTIVATION NUCLEOPORINS AND INSP(6) IN MRNA EXPORT. NATURE V. 472 238 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GOL A:1002;
B:1004;
B:1005;
 Invalid;
Invalid;
Invalid;
 none;
none;
none;
 submit data
92.094 C3 H8 O3 C(C(C...
IHP B:1003;
 Valid;
 none;
 submit data
660.035 C6 H18 O24 P6 C1(C(...
SO4 A:1001;
 Invalid;
 none;
 submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3PEV 2.5 Å EC: 3.6.4.13 S. CEREVISIAE DBP5 L327V C-TERMINAL DOMAIN BOUND TO GLE1 AND SACCHAROMYCES CEREVISIAE RECA HEAT DEAD-BOX ATPASE HELICASE MRNA EXPORT NUCLEARHYDROLASE
Ref.: A CONSERVED MECHANISM OF DEAD-BOX ATPASE ACTIVATION NUCLEOPORINS AND INSP(6) IN MRNA EXPORT. NATURE V. 472 238 2011
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 16 families.
1 3PEV - IHP C6 H18 O24 P6 C1(C(C(C(C....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 15 families.
1 3PEV - IHP C6 H18 O24 P6 C1(C(C(C(C....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 3PEV - IHP C6 H18 O24 P6 C1(C(C(C(C....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: IHP; Similar ligands found: 24
No: Ligand ECFP6 Tc MDL keys Tc
1 IHP 1 1
2 I6P 1 1
3 I5P 0.652174 1
4 5MY 0.652174 1
5 5IP 0.652174 1
6 IP5 0.652174 1
7 I0P 0.608696 0.965517
8 O81 0.6 0.965517
9 2YN 0.6 0.965517
10 I7P 0.6 0.965517
11 I8P 0.6 0.965517
12 I4P 0.571429 1
13 5A2 0.555556 0.8
14 4WZ 0.555556 0.8
15 5A3 0.555556 0.8
16 2IP 0.545455 0.933333
17 4IP 0.538462 0.965517
18 ITP 0.52 0.933333
19 IP2 0.5 0.933333
20 I3S 0.481481 0.933333
21 I3P 0.481481 0.933333
22 I4D 0.48 0.9
23 0EJ 0.46875 0.823529
24 4WY 0.454545 0.8
Similar Ligands (3D)
Ligand no: 1; Ligand: IHP; Similar ligands found: 1
No: Ligand Similarity coefficient
1 IHS 0.9562
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3PEV; Ligand: IHP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 3pev.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 3PEV; Ligand: IHP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3pev.bio2) has 8 residues
No: Leader PDB Ligand Sequence Similarity
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