Receptor
PDB id Resolution Class Description Source Keywords
3P2E 1.68 Å EC: 2.-.-.- STRUCTURE OF AN ANTIBIOTIC RELATED METHYLTRANSFERASE ESCHERICHIA COLI METHYLTRANSFERASE TRANSFERASE NPMA
Ref.: STRUCTURAL BASIS FOR THE METHYLATION OF A1408 IN 16 A PANAMINOGLYCOSIDE RESISTANCE METHYLTRANSFERASE NP CLINICAL ISOLATE AND ANALYSIS OF THE NPMA INTERACTI THE 30S RIBOSOMAL SUBUNIT. NUCLEIC ACIDS RES. 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SAH A:6732;
B:6732;
Valid;
Valid;
none;
none;
Kd = 0.6 uM
384.411 C14 H20 N6 O5 S c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3P2E 1.68 Å EC: 2.-.-.- STRUCTURE OF AN ANTIBIOTIC RELATED METHYLTRANSFERASE ESCHERICHIA COLI METHYLTRANSFERASE TRANSFERASE NPMA
Ref.: STRUCTURAL BASIS FOR THE METHYLATION OF A1408 IN 16 A PANAMINOGLYCOSIDE RESISTANCE METHYLTRANSFERASE NP CLINICAL ISOLATE AND ANALYSIS OF THE NPMA INTERACTI THE 30S RIBOSOMAL SUBUNIT. NUCLEIC ACIDS RES. 2010
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 236 families.
1 3MTE - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 3PB3 - SAH C14 H20 N6 O5 S c1nc(c2c(n....
3 3P2E Kd = 0.6 uM SAH C14 H20 N6 O5 S c1nc(c2c(n....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 211 families.
1 3MTE - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 3PB3 - SAH C14 H20 N6 O5 S c1nc(c2c(n....
3 3P2E Kd = 0.6 uM SAH C14 H20 N6 O5 S c1nc(c2c(n....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 166 families.
1 3MQ2 - SAH C14 H20 N6 O5 S c1nc(c2c(n....
2 3MTE - SAM C15 H22 N6 O5 S C[S@@+](CC....
3 3PB3 - SAH C14 H20 N6 O5 S c1nc(c2c(n....
4 3P2E Kd = 0.6 uM SAH C14 H20 N6 O5 S c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SAH; Similar ligands found: 197
No: Ligand ECFP6 Tc MDL keys Tc
1 SAH 1 1
2 5X8 0.759494 0.969697
3 A7D 0.734177 0.926471
4 TT8 0.709302 0.970588
5 SXZ 0.692308 0.916667
6 DSH 0.692308 0.914286
7 DTA 0.666667 0.857143
8 3DH 0.662338 0.869565
9 S8M 0.655556 0.901408
10 SFG 0.635294 0.954545
11 SA8 0.62069 0.915493
12 EEM 0.617977 0.890411
13 MTA 0.615385 0.869565
14 SAI 0.613636 0.955882
15 S7M 0.586957 0.916667
16 36A 0.586538 0.90411
17 K15 0.583333 0.878378
18 RAB 0.573333 0.84058
19 ADN 0.573333 0.84058
20 XYA 0.573333 0.84058
21 62X 0.572917 0.855263
22 5CD 0.571429 0.852941
23 0UM 0.5625 0.876712
24 5N5 0.558442 0.84058
25 A4D 0.551282 0.867647
26 SAM 0.537634 0.916667
27 SSA 0.536842 0.712644
28 SMM 0.536842 0.88
29 KB1 0.534653 0.902778
30 A5D 0.532609 0.857143
31 SIB 0.53125 0.928571
32 EP4 0.530864 0.819444
33 DSZ 0.530612 0.732558
34 GSU 0.53 0.752941
35 AMP 0.529412 0.763158
36 A 0.529412 0.763158
37 5CA 0.525773 0.712644
38 ME8 0.524752 0.8125
39 M2T 0.52439 0.821918
40 6RE 0.523256 0.824324
41 GJV 0.522727 0.813333
42 AAT 0.515789 0.863014
43 LSS 0.515152 0.696629
44 KAA 0.514852 0.727273
45 J7C 0.511364 0.835616
46 A5A 0.510417 0.697674
47 SON 0.505495 0.805195
48 SRP 0.505155 0.805195
49 5AL 0.5 0.779221
50 VMS 0.5 0.681818
51 KH3 0.5 0.866667
52 ADX 0.5 0.694118
53 CA0 0.5 0.769231
54 AMP MG 0.5 0.74359
55 AMO 0.5 0.805195
56 54H 0.5 0.681818
57 AHX 0.49505 0.753086
58 TSB 0.494949 0.689655
59 53H 0.494949 0.674157
60 G5A 0.494737 0.712644
61 A2D 0.494382 0.74359
62 ABM 0.494382 0.74359
63 ZAS 0.494253 0.808219
64 A6D 0.490196 0.759494
65 8QN 0.49 0.779221
66 GEK 0.49 0.956522
67 GAP 0.489583 0.769231
68 A3S 0.48913 0.884058
69 AN2 0.48913 0.734177
70 S4M 0.488889 0.831169
71 SRA 0.488636 0.746835
72 LAD 0.485437 0.810127
73 52H 0.484848 0.674157
74 A12 0.483516 0.759494
75 BA3 0.483516 0.74359
76 AP2 0.483516 0.759494
77 AOC 0.483146 0.842857
78 NEC 0.483146 0.788732
79 Y3J 0.481481 0.768116
80 NVA LMS 0.480392 0.696629
81 VRT 0.479167 0.861111
82 50T 0.478723 0.734177
83 5AS 0.478261 0.655556
84 B4P 0.478261 0.74359
85 ADP 0.478261 0.74359
86 AP5 0.478261 0.74359
87 A3N 0.477778 0.830986
88 YSA 0.476636 0.712644
89 XAH 0.476636 0.768293
90 0XU 0.473684 0.897059
91 WAQ 0.471154 0.807692
92 NSS 0.470588 0.712644
93 5AD 0.468354 0.791045
94 ADP MG 0.468085 0.734177
95 AU1 0.468085 0.725
96 M33 0.468085 0.734177
97 MAO 0.467391 0.797468
98 TXA 0.466667 0.759494
99 A3G 0.466667 0.871429
100 NB8 0.466667 0.775
101 3AM 0.465909 0.727273
102 DAL AMP 0.465347 0.779221
103 ATP 0.463158 0.74359
104 ADP BEF 0.463158 0.716049
105 A3T 0.463158 0.842857
106 BEF ADP 0.463158 0.716049
107 ACP 0.463158 0.746835
108 7D7 0.4625 0.785714
109 LEU LMS 0.461538 0.677778
110 APC 0.458333 0.759494
111 AQP 0.458333 0.74359
112 APR 0.458333 0.766234
113 PRX 0.458333 0.746835
114 AR6 0.458333 0.766234
115 5FA 0.458333 0.74359
116 IOT 0.456897 0.761905
117 4AD 0.456311 0.794872
118 PAJ 0.456311 0.722892
119 WSA 0.45614 0.72093
120 FA5 0.453704 0.805195
121 YAP 0.453704 0.794872
122 RBY 0.453608 0.782051
123 ADV 0.453608 0.782051
124 ADP PO3 0.453608 0.763158
125 AD9 0.453608 0.725
126 SAP 0.453608 0.728395
127 AGS 0.453608 0.728395
128 PTJ 0.45283 0.731707
129 MHZ 0.452632 0.797468
130 00A 0.451923 0.740741
131 A3P 0.451613 0.74026
132 YLP 0.451327 0.771084
133 7MD 0.45045 0.768293
134 ALF ADP 0.45 0.707317
135 ADP ALF 0.45 0.707317
136 ATP MG 0.44898 0.734177
137 2VA 0.447917 0.819444
138 OOB 0.446602 0.779221
139 ANP 0.444444 0.725
140 ACQ 0.444444 0.746835
141 TAT 0.444444 0.7375
142 P5A 0.443396 0.719101
143 7D5 0.443182 0.708861
144 ARG AMP 0.442478 0.759036
145 A1R 0.442308 0.7625
146 YLC 0.439655 0.790123
147 2AM 0.438202 0.717949
148 DLL 0.438095 0.779221
149 A22 0.436893 0.734177
150 D3Y 0.436893 0.859155
151 TYR AMP 0.436364 0.782051
152 ATF 0.435644 0.716049
153 MYR AMP 0.435185 0.746988
154 SO8 0.434343 0.808219
155 3UK 0.433962 0.769231
156 OAD 0.433962 0.769231
157 TAD 0.433628 0.765432
158 25A 0.432692 0.74359
159 ANP MG 0.431373 0.707317
160 VO4 ADP 0.431373 0.734177
161 ADP VO4 0.431373 0.734177
162 9SN 0.431193 0.731707
163 TYM 0.431034 0.805195
164 PR8 0.429907 0.8
165 ADQ 0.428571 0.746835
166 YLB 0.42735 0.771084
167 3OD 0.425926 0.769231
168 FYA 0.425926 0.779221
169 1ZZ 0.425926 0.746988
170 PPS 0.425743 0.674419
171 NVA 2AD 0.424242 0.808219
172 MAP 0.423077 0.707317
173 A2P 0.421053 0.727273
174 4YB 0.421053 0.735632
175 ADP BMA 0.420561 0.746835
176 5SV 0.419048 0.731707
177 3NZ 0.416667 0.824324
178 YLA 0.416667 0.771084
179 48N 0.413793 0.753086
180 LPA AMP 0.413793 0.768293
181 AYB 0.413223 0.761905
182 QQY 0.413043 0.696203
183 ACK 0.413043 0.710526
184 JB6 0.412844 0.7625
185 BIS 0.412844 0.719512
186 PAP 0.41 0.730769
187 OVE 0.408602 0.7125
188 4UV 0.40708 0.75
189 AMP DBH 0.40708 0.746835
190 3AD 0.406977 0.852941
191 AF3 ADP 3PG 0.40678 0.743902
192 OMR 0.40678 0.738095
193 LAQ 0.405172 0.768293
194 A A 0.40367 0.74359
195 7C5 0.403509 0.789474
196 7MC 0.403361 0.75
197 4UU 0.4 0.75
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3P2E; Ligand: SAH; Similar sites found: 349
This union binding pocket(no: 1) in the query (biounit: 3p2e.bio2) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3DXY SAM 0.000001137 0.59889 None
2 4POO SAM 0.0002449 0.46407 None
3 2VDV SAM 0.00000005027 0.65353 1.33333
4 3KYF 5GP 5GP 0.009155 0.41731 1.33333
5 4DSG UDP 0.03493 0.40197 1.33333
6 1NFQ NAI 0.01281 0.4003 1.53846
7 5E1M PRO PRO LYS ARG ILE ALA 0.0000301 0.4204 1.77778
8 5E1M SAH 0.0000301 0.4204 1.77778
9 1UAY ADN 0.006725 0.4155 1.77778
10 2JAH NDP 0.005573 0.41494 1.77778
11 3FZG SAM 0.00003914 0.51314 2
12 3LCC SAH 0.000002926 0.51745 2.22222
13 3L9W AMP 0.001589 0.43873 2.22222
14 3L9W GSH 0.002124 0.43045 2.22222
15 3CH6 311 0.01051 0.42746 2.22222
16 3CH6 NAP 0.01051 0.42746 2.22222
17 3OID NDP 0.006384 0.41481 2.22222
18 4BJZ P3A 0.02794 0.41181 2.22222
19 2Q3M MLA 0.01742 0.41003 2.22222
20 1SOW NAD 0.01245 0.40085 2.22222
21 5N53 8NB 0.002585 0.45704 2.5641
22 1NV8 MEQ 0.0000244 0.51244 2.66667
23 1NV8 SAM 0.00002925 0.51088 2.66667
24 3HVJ 705 0.000336 0.47635 2.66667
25 3TKY SAH 0.0001529 0.46169 2.66667
26 3PT9 SAH 0.0001901 0.45321 2.66667
27 2YY7 NAD 0.0018 0.43637 2.66667
28 5JJR SAH 0.001755 0.42995 2.66667
29 3GCZ SAM 0.001054 0.42381 2.66667
30 1KYQ NAD 0.0009057 0.42261 2.66667
31 1V59 FAD 0.008562 0.42115 2.66667
32 3EVG SAH 0.001249 0.42039 2.66667
33 1AE1 NAP 0.006251 0.41521 2.66667
34 4C3Y FAD 0.009813 0.41487 2.66667
35 4C3Y ANB 0.01259 0.41429 2.66667
36 1V59 NAD 0.0008757 0.41012 2.66667
37 1ZK4 NAP 0.01065 0.4083 2.66667
38 2GDZ NAD 0.008229 0.40628 2.66667
39 3ZV6 NAD 0.01967 0.40114 2.66667
40 3ZV6 4HB 0.02056 0.40114 2.66667
41 2BRY FAD 0.0128 0.40148 3.01811
42 3G2O SAM 0.00002452 0.51053 3.11111
43 3BGD PM6 0.0003431 0.46306 3.11111
44 3BGD SAH 0.0002442 0.46222 3.11111
45 1WG8 SAM 0.0002819 0.46148 3.11111
46 4RDH AMP 0.0008804 0.45179 3.11111
47 2GND MAN 0.006213 0.43716 3.11111
48 2EFJ SAH 0.0003395 0.4369 3.11111
49 2PHT MAN MAN MAN 0.006556 0.43625 3.11111
50 4D79 ATP 0.001685 0.43071 3.11111
51 2IV2 MGD 0.00357 0.42946 3.11111
52 4RDI ATP 0.001187 0.42166 3.11111
53 4NTD FAD 0.006624 0.41962 3.11111
54 3LXD FAD 0.005874 0.41872 3.11111
55 3NUG NAD 0.005208 0.41623 3.11111
56 1KNR FAD 0.0105 0.41259 3.11111
57 1ORR NAD 0.007734 0.41114 3.11111
58 5FJN BE2 0.01425 0.411 3.11111
59 5FJN FAD 0.0125 0.411 3.11111
60 1X87 NAD 0.004011 0.41094 3.11111
61 3LAD FAD 0.01322 0.4099 3.11111
62 2IV2 2MD 0.008066 0.40792 3.11111
63 1ZBQ NAD 0.008681 0.40774 3.11111
64 2PHR MAN MAN BMA MAN 0.01872 0.40611 3.11111
65 2RAB NAD 0.03755 0.40338 3.11111
66 2RAB FAD 0.02001 0.40338 3.11111
67 4EIP K2C 0.02459 0.40086 3.11111
68 4EIP FAD 0.02302 0.40057 3.11111
69 1WY7 SAH 0.001826 0.4236 3.38164
70 3EGI ADP 0.0002939 0.50312 3.39806
71 1G60 SAM 0.00002354 0.49438 3.55556
72 3A4T SFG 0.0003099 0.4559 3.55556
73 1JG3 ADN 0.0004971 0.45376 3.55556
74 5HJM MTA 0.0004856 0.44987 3.55556
75 5CUQ NSC 0.001507 0.44109 3.55556
76 3FUU ADN 0.0005459 0.43958 3.55556
77 2V3V MGD 0.008661 0.43697 3.55556
78 3VYW SAM 0.0008035 0.43661 3.55556
79 1P1C SAH 0.001019 0.43605 3.55556
80 2YX1 SFG 0.0003384 0.42639 3.55556
81 1N4W FAD 0.006164 0.4259 3.55556
82 4CQM NAP 0.003223 0.424 3.55556
83 2WA2 SAM 0.001362 0.41492 3.55556
84 1H82 GZZ 0.02544 0.40918 3.55556
85 4GKV NAD 0.009392 0.40855 3.55556
86 3E1T FAD 0.01495 0.40834 3.55556
87 2EXX NAP 0.01164 0.40442 3.55556
88 5JCM ISD 0.03564 0.40392 3.55556
89 5JCM FAD 0.03467 0.40392 3.55556
90 5JCM NAD 0.03564 0.40392 3.55556
91 1ZMD NAI 0.001867 0.40204 3.55556
92 1YC5 NCA 0.007068 0.40649 3.65854
93 4XUC 43G 0.0005428 0.46323 3.66972
94 4XUC SAM 0.0005428 0.46323 3.66972
95 1NW5 SAM 0.00006617 0.47633 3.76176
96 1ELI PYC 0.005278 0.42405 3.85604
97 5GWX SAR 0.00002839 0.46216 3.87324
98 5GWX SAM 0.00002839 0.46216 3.87324
99 1EJ0 SAM 0.001211 0.42297 3.88889
100 3A25 SAM 0.001004 0.4405 3.98671
101 5DX1 SFG 0.00008577 0.48531 4
102 4PIO SAH 0.0002638 0.47706 4
103 4PIO AVI 0.0002646 0.4756 4
104 5DX0 SFG 0.0001554 0.47431 4
105 5DWQ SFG 0.0001415 0.47417 4
106 1Q0S SAH 0.0001747 0.47029 4
107 3O7W SAM 0.00002659 0.46904 4
108 5DX8 SFG 0.0001401 0.4545 4
109 5DXA SFG 0.0001677 0.452 4
110 4M52 FAD 0.006017 0.42545 4
111 1YY5 FAD 0.006992 0.42431 4
112 2AE2 NAP 0.0069 0.42083 4
113 3AD8 NAD 0.005936 0.41737 4
114 1FNZ A2G 0.01933 0.41065 4
115 2RGJ FAD 0.01078 0.40476 4
116 2YVJ FAD 0.01592 0.40151 4
117 1AX2 NDG GAL 0.02779 0.40151 4
118 1PS9 FAD 0.01956 0.40124 4
119 2YVF FAD 0.03831 0.40004 4
120 2YVF NAD 0.03943 0.40004 4
121 5OFW 9TW 0.02729 0.4021 4.03587
122 3WV8 ATP 0.0009887 0.43673 4.12844
123 4FZV SAM 0.0003375 0.45232 4.1841
124 1JGS SAL 0.001412 0.44087 4.34783
125 1TPY SAH 0.00003756 0.49432 4.44444
126 3X0D SAH 0.00005847 0.47855 4.44444
127 3GU3 SAH 0.000007581 0.47259 4.44444
128 3DMH SAM 0.0002247 0.45968 4.44444
129 3S1S SAH 0.0002918 0.44274 4.44444
130 1QXA GLY GLY GLY 0.00673 0.43678 4.44444
131 1DL5 SAH 0.002471 0.42466 4.44444
132 3DMH GMP 0.0002693 0.42117 4.44444
133 3AYI HCI 0.0135 0.41752 4.44444
134 3AYI FAD 0.01302 0.41752 4.44444
135 3TN7 NJP 0.00992 0.40399 4.44444
136 3GDN HBX 0.02639 0.40244 4.44444
137 3GDN FAD 0.01925 0.40244 4.44444
138 4UCI SAM 0.004745 0.40154 4.44444
139 4K79 GAL A2G 0.01595 0.40961 4.54545
140 4NYT PC 0.001723 0.44761 4.60829
141 3OFK SAH 0.0005755 0.4372 4.62963
142 2HMT NAI 0.0008467 0.4376 4.86111
143 2OBF F83 0.0002574 0.48748 4.88889
144 1G55 SAH 0.00006443 0.48719 4.88889
145 4A6D SAM 0.0001653 0.46978 4.88889
146 1QZZ SAM 0.00002619 0.46592 4.88889
147 3VC1 SAH 0.0000719 0.46567 4.88889
148 3TKA SAM 0.0009172 0.43421 4.88889
149 5ITV NAI 0.004024 0.42112 4.88889
150 1DMR PGD 0.02238 0.41481 4.88889
151 4YNU FAD 0.01128 0.4148 4.88889
152 4YNU LGC 0.0133 0.4148 4.88889
153 3S5W FAD 0.006686 0.41149 4.88889
154 3G5S FAD 0.01308 0.40534 4.88889
155 2VPY MGD 0.01407 0.4227 5.12821
156 2JJQ SAH 0.000009574 0.54771 5.33333
157 2FK8 SAM 0.00005224 0.48609 5.33333
158 1RJD SAM 0.00008949 0.47634 5.33333
159 2A14 SAH 0.0001025 0.47604 5.33333
160 2ZWA SAH 0.0001466 0.46954 5.33333
161 4TM3 FAD 0.02377 0.41412 5.33333
162 1LVL NAD 0.003551 0.40969 5.33333
163 2WK1 SAH 0.003556 0.40966 5.33333
164 3QWI NAP 0.009442 0.40614 5.33333
165 3QWI CUE 0.01527 0.40614 5.33333
166 2NVK FAD 0.01671 0.40437 5.33333
167 5UAV TFB 0.01473 0.40201 5.33333
168 5UAV NDP 0.01473 0.40201 5.33333
169 2XVE FAD 0.03723 0.40064 5.33333
170 4F8L AES 0.03508 0.4075 5.51724
171 3Q87 SAM 0.00008946 0.4806 5.6
172 1XDS SAM 0.00004035 0.51871 5.77778
173 2EG5 SAH 0.0001958 0.48686 5.77778
174 5FTW SAH 0.0003488 0.45172 5.77778
175 1U2Z SAH 0.0005215 0.44832 5.77778
176 2WHL MAN BMA BMA 0.002963 0.44552 5.77778
177 4DCM SAM 0.000216 0.43895 5.77778
178 2E5V FAD 0.005828 0.42881 5.77778
179 3F8D FAD 0.01692 0.42236 5.77778
180 5XLX SAH 0.001503 0.41803 5.77778
181 1ZQ9 SAM 0.003492 0.41695 5.77778
182 1O97 AMP 0.02746 0.4044 5.77778
183 3RKR NAP 0.0008458 0.40412 5.77778
184 4USR FAD 0.01332 0.40071 5.77778
185 4DMG SAM 0.00001745 0.54252 6.22222
186 5E8J SAH 0.00002419 0.52902 6.22222
187 5X62 SAH 0.00005809 0.49967 6.22222
188 5THY SAH 0.00003439 0.49366 6.22222
189 5THZ SAH 0.00004471 0.49331 6.22222
190 3FRH SAH 0.00005022 0.49118 6.22222
191 4BLW AMP 0.0005483 0.46304 6.22222
192 5E9W SAH 0.00003187 0.45891 6.22222
193 4BLW SAH 0.0006044 0.45086 6.22222
194 3VSE SAH 0.00009648 0.43548 6.22222
195 3KLJ FAD 0.002509 0.43266 6.22222
196 1D1Q 4NP 0.008185 0.4325 6.22222
197 1EU1 MGD 0.006675 0.41843 6.22222
198 3GD4 NAD 0.02247 0.41801 6.22222
199 3GD4 FAD 0.01511 0.41801 6.22222
200 3IHG FAD 0.004693 0.41555 6.22222
201 2RGO FAD 0.007904 0.41514 6.22222
202 3C6K MTA 0.009106 0.41134 6.22222
203 3C6K SPD 0.009106 0.41134 6.22222
204 4BV6 FAD 0.01192 0.41103 6.22222
205 1XSE NDP 0.01354 0.40759 6.22222
206 1J0X NAD 0.02021 0.40234 6.22222
207 4OBW SAM 0.00008195 0.48777 6.66667
208 1KPG SAH 0.00003971 0.48321 6.66667
209 2EJU SAH 0.0000387 0.47944 6.66667
210 1N2X SAM 0.0001655 0.46934 6.66667
211 3GDH SAH 0.00008238 0.45751 6.66667
212 2BZG SAH 0.0001622 0.45692 6.66667
213 1REO FAD 0.004363 0.4288 6.66667
214 4NTC FAD 0.009424 0.41566 6.66667
215 1XHC FAD 0.00848 0.41272 6.66667
216 2GVC FAD 0.01156 0.40343 6.66667
217 2VVM FAD 0.01813 0.40184 6.66667
218 2PXX SAH 0.000002755 0.53254 7.11111
219 5KOK SAH 0.00003122 0.50057 7.11111
220 4Y2H SAH 0.0003889 0.47594 7.11111
221 4Y2H 49K 0.0006347 0.46639 7.11111
222 2PWY SAH 0.0002605 0.46103 7.11111
223 4R6W SAH 0.0005284 0.46101 7.11111
224 4R6W PC 0.001801 0.45747 7.11111
225 4ONQ SFG 0.0004066 0.44009 7.11111
226 1BC5 SAH 0.0009943 0.4365 7.11111
227 2CDU FAD 0.004328 0.42574 7.11111
228 4J36 1HR 0.008618 0.41927 7.11111
229 4J36 FAD 0.006012 0.41596 7.11111
230 5KOK S9T 0.00005804 0.41524 7.11111
231 5KOK R9T 0.0002215 0.40224 7.11111
232 1UP7 NAD 0.007359 0.40137 7.11111
233 4EMJ FAD 0.01429 0.40559 7.47664
234 2Z3Y F2N 0.003414 0.43758 7.55556
235 1RP0 AHZ 0.002872 0.42882 7.55556
236 2WSB NAD 0.005796 0.42425 7.55556
237 1RSG FAD 0.009074 0.41734 7.55556
238 1RYI FAD 0.009478 0.41555 7.55556
239 4J1Q NDP 0.00437 0.41549 7.55556
240 3D3W NAP 0.006391 0.41479 7.55556
241 1I8T FAD 0.01065 0.41136 7.55556
242 1PR9 NAP 0.008098 0.41025 7.55556
243 3U31 NAD 0.004632 0.40004 7.55556
244 3G89 SAM 0.0000003692 0.61334 8
245 2AOT SAH 0.000005444 0.49871 8
246 3A27 SAM 0.0005662 0.4513 8
247 2DPM SAM 0.0004355 0.4497 8
248 1JQD SAH 0.00008427 0.42706 8
249 1JQD HSM 0.0003321 0.42112 8
250 2P41 SAH 0.002923 0.42031 8
251 3L6C MLI 0.0217 0.41299 8
252 2ZIF SAM 0.00004213 0.48483 8.44444
253 1Y8Q ATP 0.0004633 0.42995 8.44444
254 2DKH FAD 0.005976 0.41607 8.44444
255 2DKH 3HB 0.008367 0.41607 8.44444
256 2DTX BMA 0.008993 0.41466 8.44444
257 3ICT FAD 0.01228 0.40657 8.44444
258 3UCL NAP 0.03412 0.40651 8.44444
259 3UCL FAD 0.03149 0.40651 8.44444
260 3UCL CYH 0.03149 0.40651 8.44444
261 3ICS FAD 0.01398 0.40504 8.44444
262 3ICR FAD 0.01493 0.40276 8.44444
263 1IM8 SAI 0.0003959 0.44942 8.60656
264 1FL2 FAD 0.005665 0.4237 8.70968
265 5M58 SAH 0.00005918 0.47809 8.88889
266 4M38 SAH 0.0001133 0.47207 8.88889
267 4M37 SAH 0.000132 0.46421 8.88889
268 3MB5 SAM 0.0002723 0.44367 8.88889
269 3GMB FAD 0.006202 0.41653 8.88889
270 2GAG NAD 0.007915 0.41512 8.88889
271 3H8V ATP 0.00304 0.40638 8.88889
272 2GAG FAD 0.02283 0.40156 8.88889
273 1Z3C SA8 0.0001328 0.48413 9.33333
274 1KYZ SAH 0.00006007 0.47345 9.33333
275 1D4D FAD 0.002909 0.44074 9.33333
276 4RPL FAD 0.01067 0.42842 9.33333
277 1KYZ FER 0.002329 0.42727 9.33333
278 4RPL 3UC 0.01256 0.42687 9.33333
279 4XBA GMP 0.014 0.40434 9.33333
280 3T31 DCQ 0.03156 0.40219 9.33333
281 3T31 FAD 0.02959 0.40219 9.33333
282 2F5Z FAD 0.02055 0.402 9.375
283 3I53 SAH 0.00006 0.48358 9.63855
284 3JWH SAH 0.0000003458 0.52505 9.67742
285 1XHL NDP 0.002466 0.43172 9.76431
286 5MPT SAH 0.00003278 0.50506 9.77778
287 5MGZ SAH 0.00004446 0.49404 9.77778
288 1QAN SAH 0.0001382 0.47061 9.77778
289 4II2 ATP 0.0006013 0.44186 9.77778
290 1XKQ NDP 0.004599 0.42108 9.77778
291 3SSO SAH 0.004494 0.40542 9.77778
292 4IWN GEK 0.0000197 0.50831 10.2222
293 3EGV SAH 0.00006705 0.49691 10.2222
294 2NXE SAM 0.00006854 0.49114 10.2222
295 1V6A TRE 0.001191 0.47518 10.2222
296 5EB4 FAD 0.01641 0.40381 10.2222
297 3P9C SAH 0.0003116 0.47105 10.6667
298 3GEG NAD 0.007038 0.40657 10.6667
299 3QOX SAH 0.000427 0.45198 11.1111
300 2C7G FAD 0.02881 0.40341 11.1111
301 4FWE FAD 0.005982 0.42649 11.5556
302 4HSU FAD 0.00786 0.42198 11.5556
303 4GUT FAD 0.008692 0.4217 11.5556
304 1R37 NAD 0.007543 0.41277 11.5556
305 5BUK FAD 0.01398 0.41054 11.5556
306 3CTY FAD 0.01455 0.40974 11.5556
307 1L1E SAH 0.00005304 0.48581 12
308 4C4A SAH 0.00006729 0.47598 12
309 1I1N SAH 0.0001894 0.47416 12
310 3M6W SAM 0.003289 0.42579 12
311 4GQB 0XU 0.00005714 0.49086 12.4444
312 1KPH SAH 0.00004614 0.49058 12.4444
313 5FA5 MTA 0.0001442 0.48745 12.4444
314 1R18 SAH 0.0002334 0.46106 12.4444
315 3GRU AMP 0.001472 0.42932 12.4444
316 4USQ FAD 0.007814 0.41209 12.4444
317 4M73 M72 0.00006502 0.50814 13.3333
318 4M73 SAH 0.00006186 0.50772 13.3333
319 4OPC FDA 0.02382 0.42514 13.3333
320 4OPC PGT 0.02728 0.42496 13.3333
321 1LSS NAD 0.005731 0.401 13.5714
322 5L95 AMP 0.003772 0.41197 13.75
323 1VE3 SAM 0.00001122 0.52529 13.7778
324 5XVK SAH 0.0001142 0.45837 13.7778
325 3GXO SAH 0.00003771 0.51387 14.2222
326 3GWZ SAH 0.00002314 0.46912 14.2222
327 4ZA2 NAD 0.009964 0.40137 14.2292
328 1IY8 NAD 0.003236 0.42525 14.6667
329 4CS9 AMP 0.02708 0.40424 15.3439
330 1G0N PHH 0.01171 0.41138 15.5556
331 1G0N NDP 0.01031 0.41099 15.5556
332 3TLJ SAH 0.00001362 0.49363 16.4444
333 2XVM SAH 0.000006646 0.49125 16.4444
334 4IEE AGS 0.02373 0.4009 17.3333
335 1QO8 FAD 0.005844 0.42602 18.6667
336 2W68 SIA GAL BGC 0.02613 0.40147 18.9744
337 4AZW SAM 0.00003127 0.49009 19.1111
338 3CGD FAD 0.02999 0.4134 19.1111
339 3CGD COA 0.02999 0.4134 19.1111
340 3CGD NAD 0.02999 0.4134 19.1111
341 3CGB FAD 0.01534 0.40224 19.1111
342 3NTD FAD 0.01224 0.40764 20
343 3NDJ SAH 0.001265 0.46012 20.4444
344 3NDJ JHZ 0.001265 0.46012 20.4444
345 2PT9 2MH 0.007286 0.41344 21.3333
346 2PT9 S4M 0.004698 0.4112 21.3333
347 4N49 SAM 0.003295 0.41105 21.3333
348 4QTU SAM 0.00005092 0.49153 21.4815
349 1E6E FAD 0.01435 0.40251 23.4375
Pocket No.: 2; Query (leader) PDB : 3P2E; Ligand: SAH; Similar sites found: 1
This union binding pocket(no: 2) in the query (biounit: 3p2e.bio1) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1MO9 KPC 0.04796 0.40427 13.3333
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