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Receptor
PDB id Resolution Class Description Source Keywords
3NKV 1.7 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF RAB1B COVALENTLY MODIFIED WITH AMP AT Y HOMO SAPIENS POSTTRANSLATIONAL MODIFICATION AMPYLATION ADENYLYLATION RVESICULAR TRANSPORT PROTEIN TRANSPORT
Ref.: THE LEGIONELLA EFFECTOR PROTEIN DRRA AMPYLATES THE TRAFFIC REGULATOR RAB1B. SCIENCE V. 329 946 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
AMP A:600;
B:600;
Part of Protein;
Part of Protein;
none;
none;
submit data
347.221 C10 H14 N5 O7 P c1nc(...
BA A:175;
B:175;
Part of Protein;
Part of Protein;
none;
none;
submit data
137.327 Ba [Ba+2...
GNP A:400;
B:400;
Valid;
Valid;
none;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG A:500;
B:500;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3NKV 1.7 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF RAB1B COVALENTLY MODIFIED WITH AMP AT Y HOMO SAPIENS POSTTRANSLATIONAL MODIFICATION AMPYLATION ADENYLYLATION RVESICULAR TRANSPORT PROTEIN TRANSPORT
Ref.: THE LEGIONELLA EFFECTOR PROTEIN DRRA AMPYLATES THE TRAFFIC REGULATOR RAB1B. SCIENCE V. 329 946 2010
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (15)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 175 families.
1 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
6 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
12 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
14 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
15 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (274)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKR - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
18 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
22 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 6ARK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 5VPZ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
27 6F76 - CVK C24 H26 N2 O3 CN(C)Cc1cc....
28 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
29 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
31 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
32 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5OCO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
34 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
36 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 5VP7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
38 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
40 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
41 5VBM - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
43 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
45 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
47 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
49 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
54 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
55 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
57 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
58 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
59 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
61 5VQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
62 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
64 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5VPY - 9GM C10 H17 N6 O13 P3 c1nc2c(n1[....
67 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
68 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
71 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 5VQ6 - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
73 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
78 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
81 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 5UK9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
84 6ASE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
85 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
86 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
87 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
88 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
90 5VQ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
91 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
92 5VPI - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
93 5W22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
94 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
96 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
97 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
98 6BP1 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
99 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
101 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
102 5VBZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
104 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
107 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
108 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
109 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
112 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
113 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
114 5VQ8 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 6B0Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
117 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
118 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
119 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
123 5OCT - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
124 5VBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
126 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
127 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
128 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
130 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
133 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
134 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
135 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
138 6B0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
140 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
141 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
142 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
143 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
144 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
145 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
147 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
150 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
151 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
152 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
153 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
154 5VQ2 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
155 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
156 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
157 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
158 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 5WHD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
163 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
164 5V9U - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
165 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
168 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
170 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
171 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
172 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
174 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
175 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
178 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
179 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
181 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
183 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
185 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
186 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
187 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
188 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
189 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
190 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
191 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
192 1N6K - GDP AF3 n/a n/a
193 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
194 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
197 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
201 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
203 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
207 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
208 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
209 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
210 5OCG - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
211 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
214 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
215 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
216 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
221 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
225 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
227 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
228 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
229 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
230 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
231 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
232 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
234 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
235 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
236 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
237 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
238 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
239 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
241 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
242 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
243 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
244 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
245 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
247 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
248 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
249 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
250 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
251 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
252 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
253 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
254 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
255 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
256 5A0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
257 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
258 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
259 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
260 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
261 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
262 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
263 5XC5 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
264 5XC3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
265 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
266 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
267 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
268 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
269 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
270 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
271 6BSX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
272 5YXH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
273 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
274 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 132
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 9GM 1 1
3 GDP 0.839506 0.973684
4 GP3 0.82716 0.948718
5 GTP 0.809524 0.973684
6 GNH 0.807229 0.986842
7 G1R 0.77907 0.961039
8 GCP 0.77907 0.948718
9 GSP 0.770115 0.925
10 5GP 0.756098 0.960526
11 G 0.756098 0.960526
12 G2R 0.747253 0.936709
13 GMV 0.747126 0.948718
14 GAV 0.714286 0.936709
15 GP2 0.712644 0.936709
16 G2P 0.711111 0.936709
17 Y9Z 0.708333 0.880952
18 GDC 0.690722 0.936709
19 GDD 0.690722 0.936709
20 GKE 0.690722 0.936709
21 G5P 0.686869 0.948718
22 GPG 0.684211 0.936709
23 GTG 0.683673 0.91358
24 GDR 0.683673 0.936709
25 GFB 0.683673 0.936709
26 JB2 0.68 0.936709
27 GKD 0.68 0.936709
28 6CK 0.676768 0.91358
29 G3A 0.676768 0.948718
30 GDX 0.673267 0.948718
31 ALF 5GP 0.67033 0.86747
32 YGP 0.663265 0.879518
33 GPD 0.656863 0.902439
34 ALF GDP 0.645833 0.86747
35 GDP AF3 0.645833 0.86747
36 GDP ALF 0.645833 0.86747
37 JB3 0.641509 0.925
38 DBG 0.640351 0.974359
39 G3D 0.638298 0.960526
40 G4P 0.625 0.960526
41 GMP 0.621951 0.857143
42 NGD 0.62037 0.936709
43 GGM 0.618182 0.925926
44 0O2 0.616162 0.960526
45 2MD 0.603604 0.870588
46 CAG 0.60177 0.904762
47 U2G 0.590909 0.91358
48 FEG 0.590909 0.858824
49 GDP 7MG 0.590476 0.888889
50 MGD 0.587719 0.870588
51 G G 0.586538 0.924051
52 ZGP 0.585586 0.848837
53 CG2 0.580357 0.91358
54 ANP 0.568421 0.922078
55 PGD 0.567797 0.902439
56 MD1 0.567797 0.870588
57 3GP 0.56044 0.922078
58 TPG 0.558333 0.822222
59 GH3 0.55 0.948052
60 FE9 0.546219 0.778947
61 GPX 0.539216 0.922078
62 G4M 0.539062 0.860465
63 DGI 0.536082 0.9
64 BGO 0.535088 0.901235
65 IDP 0.53125 0.947368
66 DGT 0.53 0.9
67 2GP 0.526882 0.935065
68 G1R G1R 0.520325 0.901235
69 GCP G 0.518868 0.897436
70 A G 0.516949 0.911392
71 U A G G 0.512605 0.911392
72 G A A A 0.504202 0.9
73 AGO 0.504202 0.91358
74 P2G 0.5 0.860759
75 G1G 0.5 0.902439
76 R7I 0.49505 0.922078
77 MGP 0.49505 0.936709
78 R5I 0.49505 0.922078
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 AKW 0.483051 0.869048
83 DG 0.474227 0.8875
84 DGP 0.474227 0.8875
85 G U 0.466667 0.878049
86 IMP 0.463918 0.934211
87 G2Q 0.462963 0.936709
88 GPC 0.459677 0.858824
89 G C 0.459016 0.878049
90 GTA 0.448276 0.91358
91 G7M 0.444444 0.924051
92 MAP 0.439252 0.898734
93 G G G RPC 0.435484 0.853659
94 B4P 0.434343 0.871795
95 AP5 0.434343 0.871795
96 ADP 0.434343 0.896104
97 A2D 0.43299 0.871795
98 AT4 0.43 0.8625
99 G G G C 0.426357 0.890244
100 AU1 0.425743 0.922078
101 SGP 0.425743 0.807229
102 BA3 0.424242 0.871795
103 A G C C 0.423077 0.888889
104 35G 0.423077 0.909091
105 PCG 0.423077 0.909091
106 C2E 0.423077 0.897436
107 APC G U 0.421875 0.864198
108 HEJ 0.421569 0.896104
109 ATP 0.421569 0.896104
110 ACQ 0.419048 0.873418
111 5GP 5GP 0.419048 0.860759
112 5FA 0.417476 0.896104
113 AQP 0.417476 0.896104
114 01G 0.417391 0.880952
115 AN2 0.415842 0.909091
116 UNP 0.415842 0.810127
117 6AD 0.415094 0.821429
118 M33 0.411765 0.860759
119 ITT 0.411765 0.846154
120 G C C C 0.410448 0.901235
121 HFD 0.409524 0.851852
122 G U34 0.408 0.86747
123 ACP 0.407767 0.873418
124 6YZ 0.407407 0.873418
125 AR6 0.403846 0.871795
126 APR 0.403846 0.871795
127 DG DG 0.403509 0.845238
128 A4P 0.403226 0.848837
129 UCG 0.402985 0.888889
130 SAP 0.4 0.851852
131 AGS 0.4 0.851852
132 AD9 0.4 0.873418
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3NKV; Ligand: GNP; Similar sites found with APoc: 458
This union binding pocket(no: 1) in the query (biounit: 3nkv.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
1 1NJF ADP None
2 1GXU 2HP None
3 1NJF AGS None
4 1PTR PRB None
5 1E2K TMC None
6 2RGX AP5 None
7 1ION ADP None
8 3KC1 2T6 None
9 2DT9 THR None
10 1PZM 5GP None
11 1P72 ADP 1.14286
12 1U2Z SAH 1.14286
13 2B99 RDL 1.28205
14 4JLS 3ZE 1.31579
15 2Y65 ADP 1.71429
16 2GDJ ANP 1.71429
17 2GWH A3P 1.71429
18 2PL3 ADP 2.28571
19 4D81 ADP 2.28571
20 3BER AMP 2.28571
21 2F59 INI 2.54777
22 2GNK ATP 2.67857
23 5LB3 ADP 2.85714
24 3KJI ADP 2.85714
25 5GVR LMR 2.85714
26 4R43 GDP 2.85714
27 6C90 ADP 2.85714
28 4KBF AMP 2.85714
29 1W5T ANP 2.85714
30 1W5T ADP 2.85714
31 3H86 AP5 2.85714
32 2NCD ADP 2.85714
33 1VKJ A3P 2.85714
34 1G8S MET 2.85714
35 4NE2 SH2 2.85714
36 4NE2 ADP 2.85714
37 5ZB0 TYD 2.85714
38 5ZB0 ADP 2.85714
39 4GOX A3P 2.85714
40 3CTR MGP 2.9703
41 5U32 GDP 3.42857
42 4AG5 ADP 3.42857
43 3FWY ADP 3.42857
44 1FP6 ADP 3.42857
45 3DKP ADP 3.42857
46 3ZQ6 ADP ALF 3.42857
47 1U0J ADP 3.42857
48 2ZPA ADP 3.42857
49 2OFW ADX 3.42857
50 1X6V ADP 3.42857
51 1P4V GLY 3.42857
52 3VM7 GLC 3.42857
53 1YTM ATP 3.42857
54 3QXC ATP 3.42857
55 6AIC AMP 3.42857
56 3HU3 AGS 3.42857
57 1KGZ PRP 3.42857
58 1Z83 AP5 3.42857
59 1SVM ATP 3.42857
60 1UKZ ADP 3.42857
61 1M0S CIT 3.42857
62 2PEZ DAT 3.42857
63 2PEZ GGZ 3.42857
64 4WOP CTP 3.55556
65 4NCN GTP 4
66 4LPS GDP 4
67 1B0U ATP 4
68 5BN3 ADP 4
69 2GKS ADP 4
70 1D2E GDP 4
71 4IHQ ADP 4
72 1IN4 ADP 4
73 2ZFI ADP 4
74 1B4P GPS 4
75 4PJ3 ANP 4
76 5NM7 GLY 4
77 1QHG ATP 4
78 2Z5F A3P 4
79 3QVV A3P 4
80 1ZQ9 SAM 4
81 5DG2 GAL GLC 4.44444
82 2WIC GNP 4.57143
83 1JJ7 ADP 4.57143
84 1G7C 5GP 4.57143
85 2IS6 ADP 4.57143
86 1G6O ADP 4.57143
87 2ZR9 DTP 4.57143
88 1DAK ADP 4.57143
89 1DAK DPU 4.57143
90 1FNN ADP 4.57143
91 2Q2Y ADP 4.57143
92 2Q2Y MKR 4.57143
93 2IXE ATP 4.57143
94 3IUY AMP 4.57143
95 1QAN SAH 4.57143
96 1ZIN AP5 4.57143
97 6B8B ADP 4.57143
98 4TQK NAG 4.57143
99 3FB4 AP5 4.57143
100 3P4X ADP 4.57143
101 5G09 6DF 4.57143
102 2Q8M AMP 4.57143
103 3FYH ADP 4.57143
104 4TTQ ATP 4.57143
105 1ME8 RVP 4.57143
106 2IYL GDP 4.57746
107 1BO4 COA 4.7619
108 2X7I CIT 4.87013
109 1WF3 GNP 5.14286
110 4WZ6 ATP 5.14286
111 2WHX ADP 5.14286
112 3E70 GDP 5.14286
113 1JI0 ATP 5.14286
114 6DEF GCP 5.14286
115 1JJV ATP 5.14286
116 3B5J 12D 5.14286
117 1RJ9 GCP 5.14286
118 5Y6N ADP 5.14286
119 1XKV ATP 5.14286
120 3ZS9 ADP ALF 5.14286
121 3KTA AP5 5.14286
122 4IDN GNP 5.14286
123 2WOJ ADP ALF 5.14286
124 4XVU ATP 5.14286
125 3UIE ANP 5.14286
126 3VPD CIT 5.14286
127 4PVR ASP 5.14286
128 4IOK ADP 5.14286
129 4IOK XPO 5.14286
130 1AKY AP5 5.14286
131 3BFX A3P 5.14286
132 2JLR ANP 5.14286
133 4BFW ZVW 5.14286
134 3B8I OXL 5.14286
135 1QF9 C5P 5.14286
136 1QF9 ADP 5.14286
137 1QF9 ALF 5.14286
138 3KLL MAL 5.14286
139 4RD0 GDP 5.71429
140 4LC1 GDP 5.71429
141 2RCN GDP 5.71429
142 3A4M ADP 5.71429
143 2B8W ALF 5GP 5.71429
144 1LVK MNT BEF 5.71429
145 5UIV ADP 5.71429
146 5BQ5 ADP BEF 5.71429
147 1F5N GNP 5.71429
148 2FAH GDP 5.71429
149 3DZD ADP 5.71429
150 4FCW ADP 5.71429
151 1Z6T ADP 5.71429
152 4LJ9 ACP 5.71429
153 4IEE AGS 5.71429
154 5N69 ADP 5.71429
155 1VHT BA3 5.71429
156 4O48 ASP 5.71429
157 4ZDJ UTP 5.71429
158 5I34 GDP 5.71429
159 1NHX FTB 5.71429
160 2ZJ5 ADP 5.71429
161 1NHX PEP 5.71429
162 1KO8 6PG 5.71429
163 4YS0 ADP 5.71429
164 2XCU C5P 5.71429
165 2GMV UN8 5.71429
166 4QM7 GTP 5.84795
167 1TAD ALF 6.28571
168 1TAD GDP 6.28571
169 1BH2 GSP 6.28571
170 1G6H ADP 6.28571
171 1SVK ALF GDP 6.28571
172 5YV5 ADP 6.28571
173 4KFU ACP 6.28571
174 2XTN GTP 6.28571
175 1YQT ADP 6.28571
176 1Y3A GDP 6.28571
177 5XKT GNP 6.28571
178 6CRK GDP 6.28571
179 3TK1 GDP 6.28571
180 4HI0 GDP 6.28571
181 1GOT GDP 6.28571
182 3TBK ANP 6.28571
183 1GP2 GDP 6.28571
184 2D2F ADP 6.28571
185 4P4T GDP 6.28571
186 5KDO GDP 6.28571
187 2OM2 GDP 6.28571
188 3DEF GDP 6.28571
189 1IWE IMP 6.28571
190 4R2I ANP 6.28571
191 5Z69 AGS 6.28571
192 3DC4 ADP 6.28571
193 1K6M AGS 6.28571
194 3FVQ ATP 6.28571
195 3QKT ANP 6.28571
196 5EXT ADP 6.28571
197 4JAW GAL NGT 6.28571
198 1NST A3P 6.28571
199 1Q19 SSC 6.28571
200 4QOS ADP 6.28571
201 1UJ2 ADP 6.28571
202 1UJ2 C5P 6.28571
203 3AB4 THR 6.28571
204 3AB4 LYS 6.28571
205 1B7T ADP 6.41026
206 1SQL GUN 6.84932
207 5YT0 GDP 6.85714
208 5FG3 GDP 6.85714
209 1SKQ GDP 6.85714
210 1CS4 GSP 6.85714
211 6AU6 GDP 6.85714
212 1M7G AV2 6.85714
213 1MKY GDP 6.85714
214 1OXV ANP 6.85714
215 5ZXD ATP 6.85714
216 5L3S GNP 6.85714
217 1SQ5 ADP 6.85714
218 5L3V GDP 6.85714
219 5L3W GDP 6.85714
220 2BIF SIN 6.85714
221 2BIF ANP 6.85714
222 2ATJ BHO 6.85714
223 3FJG 3PG 6.85714
224 1G3Q ADP 6.85714
225 4HSE ADP 6.85714
226 1R6B ADP 6.85714
227 5X40 ACP 6.85714
228 1M7G ADP 6.85714
229 2O0J ADP 6.85714
230 1AQU A3P 6.85714
231 1M7G ADX 6.85714
232 4YMU ATP 6.85714
233 5L3S G 6.85714
234 1KK8 BEF ADP 7.19424
235 2WJH FLC 7.22892
236 2WJH GDP 7.22892
237 1F2U ATP 7.38255
238 2AWN ADP 7.42857
239 2XT3 ADP 7.42857
240 3H4S ADP 7.42857
241 2W58 ADP 7.42857
242 3CX8 GSP 7.42857
243 4U00 ADP 7.42857
244 3AB3 GDP 7.42857
245 1PUJ GNP 7.42857
246 4NON GDP 7.42857
247 1SVI GDP 7.42857
248 5M04 GDP 7.42857
249 3BOS CDP 7.42857
250 1XX6 ADP 7.42857
251 2D7D ADP 7.42857
252 4TL6 ANP 7.42857
253 2QEN ADP 7.42857
254 4U60 SIA GAL NGA 7.42857
255 4U60 SIA 7.42857
256 3RC3 ANP 7.42857
257 4FRZ ADP 7.42857
258 1CR1 TTP 7.42857
259 4U60 SIA GAL BGC NGA GAL 7.42857
260 5TP0 BRN 7.42857
261 2XAU ADP 7.42857
262 5MEX PAP 7.42857
263 1QHH ATP 7.69231
264 2C77 GNP 8
265 2WJG GDP 8
266 3COB ADP 8
267 2C78 GNP 8
268 1G7S GDP 8
269 2CHG ANP 8
270 3ITJ CIT 8
271 1OFH ADP 8
272 3IIJ ADP 8
273 1G41 ADP 8
274 3QOX SAH 8
275 3NHB ADP 8
276 2BVN GNP 8.57143
277 5I0H ADP BEF 8.57143
278 1TQ4 GDP 8.57143
279 3MD0 GDP 8.57143
280 4PX9 ADP 8.57143
281 2CDN ADP 8.57143
282 1W0J ADP 8.57143
283 6B4K ANP 8.57143
284 1IHU AF3 8.57143
285 1W0J ADP BEF 8.57143
286 1IHU ADP 8.57143
287 2HIM ASN 8.57143
288 4MKG AP5 8.57143
289 1S3G AP5 8.57143
290 5CK5 GDP 9.14286
291 4DCT GDP 9.14286
292 4ZG4 VO4 ADP 9.14286
293 2CE7 ADP 9.14286
294 3B7G ANP 9.14286
295 5MZN ADP 9.14286
296 1L2T ATP 9.14286
297 4NU0 AP5 9.14286
298 4X8O AP5 9.14286
299 4MKF AP5 9.14286
300 4CQM NAP 9.14286
301 3R7F CP 9.14286
302 4PU6 ASP 9.16031
303 6A63 LAT 9.42029
304 2VB6 ADP BEF 9.71429
305 1XP8 AGS 9.71429
306 2GK6 ADP 9.71429
307 3RLF ANP 9.71429
308 2QZ4 ADP 9.71429
309 1OS1 PYR 9.71429
310 1WY7 SAH 9.71429
311 1T5C ADP 9.71429
312 4GBM A3P 9.71429
313 1D2N ANP 9.71429
314 1NN5 ANP 9.71429
315 1NN5 2DT 9.71429
316 1OS1 ATP 9.71429
317 1GOJ ADP 10.2857
318 3WXM GTP 10.2857
319 2HF9 GSP 10.2857
320 4ZNL BEF ADP 10.2857
321 5AK0 8V1 10.2857
322 1OYY AGS 10.2857
323 4A4Z ANP 10.2857
324 1P9B HDA 10.2857
325 1P9B GDP 10.2857
326 1NY5 ADP 10.2857
327 1YRB GDP 10.8571
328 5HCN GCP 10.8571
329 2DPY ADP 10.8571
330 1XMV ADP 10.8571
331 2J5V PCA 10.8571
332 2ODE ALF GDP 11.3475
333 3EC1 GDP 11.4286
334 3ZFD ANP 11.4286
335 1LVG ADP 11.4286
336 1RRC ADP 11.4286
337 3VX3 ADP 11.4286
338 1F9V ADP 11.4286
339 3BFV ADP 11.4286
340 1APZ ASP 11.7284
341 1W7J ADP BEF 11.9205
342 4R98 GNH 12.1771
343 1BG2 ADP 12.5714
344 2XTZ GSP 12.5714
345 2FSH ANP 12.5714
346 4QRH 0O2 12.5714
347 6GSG RCO 12.5714
348 4UOX PUT 12.5714
349 5O96 SAM 13.1429
350 1V8K ANP 13.7143
351 5ZBR ANP 13.7143
352 4WZA ACP 13.7143
353 4WZA ADP 13.7143
354 3A1S GDP 14.2857
355 4Q1A 2XZ 14.2857
356 4Q1A UDP 14.2857
357 5HR5 ADP 14.2857
358 2OG2 MLI 14.8571
359 3B9Q MLI 14.8571
360 3KAL HGS 14.8571
361 1FQK ALF 14.966
362 1FQK GDP 14.966
363 2VVG ADP 15.4286
364 4CVN ADP 15.4286
365 4H1V GNP 15.4286
366 4PFO ADP 15.4286
367 3ZIA ADP 15.873
368 3ZIA ATP 15.873
369 1DAR GDP 16
370 1QF5 RPL 16
371 1QF5 GDP 16
372 4XTR ATP 16.2162
373 4XTR ADP 16.2162
374 6G14 G4P 17.1429
375 5KSP GDP 17.1429
376 5KSZ GCP 17.1429
377 4OI4 ATP 17.3913
378 5TSH ADP 17.7143
379 5TSH ANP 17.7143
380 1LK7 DER 17.7143
381 3QF7 ANP 18
382 4DDY DN6 18.2857
383 2BEK ATP 18.8571
384 4BQS ADP 18.8571
385 4BQS K2Q 18.8571
386 2CK3 ANP 20
387 2CK3 ADP 20
388 2V7Q ATP 20
389 2V7Q ADP 20
390 1ZUI SKM 20.2381
391 2HCJ GDP 21.7143
392 1D8T GDP 21.7143
393 4B47 GDP 22.8571
394 3THR C2F 22.8571
395 1FQJ ALF 23.8095
396 1FQJ GDP 23.8095
397 6CS8 F9Y 24
398 5TCI MLI 24.5714
399 3T12 GDP ALF 25.1429
400 3T1O GDP 25.1429
401 5L3R GCP 25.1429
402 5H4S RAM 25.7143
403 2KIN ADP 26
404 3PQC GDP 28
405 2C9O ADP 29.7143
406 2GJ8 ALF GDP 30.2326
407 1NRJ GTP 30.2857
408 1F6B GDP 30.2857
409 1M2O GNP 30.2857
410 2FH5 GTP 30.8571
411 4BAS GNP 30.8571
412 2QTV GNP 31.7365
413 1ZD9 GDP 33.1429
414 1YZG GDP 33.7143
415 4M9Q GNP 34.2857
416 5KUT GDP 34.8571
417 1ZJ6 G3D 35.4286
418 2QN6 GDP 35.4839
419 1E96 GTP 36
420 1KK1 GNP 36
421 2A5F GTP 36
422 4V0K GDP 36.0947
423 1I4D GDP 36.5714
424 2W2X GSP 36.5714
425 1DS6 GDP 36.5714
426 1G4U GDP 36.5714
427 1G4U AF3 36.5714
428 1FZQ GDP 37.1429
429 2FJU GSP 37.1429
430 1HE1 GDP 37.1429
431 3W5J GDP 37.1429
432 1HE1 AF3 37.1429
433 1H65 GDP 37.1429
434 1KSH GDP 38.2857
435 1MR3 G3D 38.8571
436 2ZEJ GDP 39.4286
437 1J2J GTP 41.5663
438 1O3Y GTP 41.5663
439 1RE0 GDP 42.6829
440 1S9D GDP 42.6829
441 1UPT GTP 43.8596
442 1R4A GNP 46.0606
443 3REF GDP 46.2857
444 5UPK GNP 47.4286
445 5IRC GDP 47.4286
446 1NF3 GNP 47.4286
447 1GRN GDP 48
448 1TX4 ALF GDP 48
449 5HPY GDP 48
450 1GRN AF3 48
451 4ITR GDP 48
452 2NGR GDP 48
453 4DID GDP 48
454 2NGR AF3 48
455 2GCO GNP 48.5714
456 1CXZ GSP 48.5714
457 3T5G GDP 48.5714
458 2CJW GDP 49.7143
Pocket No.: 2; Query (leader) PDB : 3NKV; Ligand: GNP; Similar sites found with APoc: 35
This union binding pocket(no: 2) in the query (biounit: 3nkv.bio2) has 23 residues
No: Leader PDB Ligand Sequence Similarity
1 1DCP HBI None
2 1RZX ACE VAL LYS GLU SER LEU VAL None
3 5E5U MLI 2.85714
4 5THQ NDP 2.85714
5 2POC BG6 3.42857
6 1T8U UAP SGN IDS SGN 3.42857
7 6F5W KG1 4
8 3TMK T5A 4
9 2WW4 ADP 4
10 2QG6 NMN 4.57143
11 2QQ0 ANP 4.57143
12 2QQ0 THM 4.57143
13 2QQ0 TMP 4.57143
14 2QQ0 ADP 4.57143
15 2YOH WMJ 4.57143
16 1O8B ABF 4.57143
17 5WQP NCA 4.57143
18 1XEX ATP 5.14286
19 2GMV PEP 5.71429
20 4UXH T5A 5.71429
21 5WRJ A3P 6.28571
22 5WRI A3P 6.28571
23 3FSY SCA 6.28571
24 3CQD ATP 6.28571
25 2HXW FLC 6.85714
26 1LDN OXM 7.42857
27 1GYY FHC 7.89474
28 2ZL4 ALA ALA ALA ALA 8.57143
29 3X0V FAD 10.8571
30 5MST FUM 11.4286
31 1W4R TTP 12
32 2ORV 4TA 12
33 5BSH PRO 12.5714
34 2VWT PYR 15.4286
35 2I4I AMP 15.4286
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