Receptor
PDB id Resolution Class Description Source Keywords
3MU3 2.4 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF CHICKEN MD-1 COMPLEXED WITH LIPID IVA GALLUS GALLUS MD-1 LY86 LIPID IVA RP105 ASSOCIATED PROTEIN IMMUNE SYST
Ref.: CRYSTAL STRUCTURE OF SOLUBLE MD-1 AND ITS INTERACTI LIPID IVA. PROC.NATL.ACAD.SCI.USA V. 107 10990 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GOL A:3;
B:1;
B:2;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
LP4 LP5 A:300;
B:300;
Valid;
Valid;
none;
none;
submit data
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3MTX 2 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF CHICKEN MD-1 GALLUS GALLUS MD-1 LY86 RP105 ASSOCIATED PROTEIN IMMUNE SYSTEM
Ref.: CRYSTAL STRUCTURE OF SOLUBLE MD-1 AND ITS INTERACTI LIPID IVA. PROC.NATL.ACAD.SCI.USA V. 107 10990 2010
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1610 families.
1 3MU3 - LP4 LP5 n/a n/a
2 3MTX - PGT C40 H79 O10 P CCCCCCCCCC....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1331 families.
1 3MU3 - LP4 LP5 n/a n/a
2 3MTX - PGT C40 H79 O10 P CCCCCCCCCC....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1144 families.
1 3MU3 - LP4 LP5 n/a n/a
2 3MTX - PGT C40 H79 O10 P CCCCCCCCCC....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: LP4 LP5; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: LP4 LP5; Similar ligands found: 1
No: Ligand Similarity coefficient
1 LP4 LP5 1.0000
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3MTX; Ligand: PGT; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 3mtx.bio1) has 32 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 3MTX; Ligand: PGT; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3mtx.bio2) has 36 residues
No: Leader PDB Ligand Sequence Similarity
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