-->
Receptor
PDB id Resolution Class Description Source Keywords
3H9G 2.2 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF E. COLI MCCB + MCCA-N7ISOASN ESCHERICHIA COLI UBIQUITIN-ACTIVATING ENZYME MICROCIN BACTERIOCIN MCC7 PEANTIBIOTIC N-P BOND FORMATION ANTIBIOTIC ANTIMICROBIAL PHOSPHOPROTEIN TRANSFERASE TRANSFERASE-ANTIBIOTIC COMPLEX
Ref.: HOW THE MCCB BACTERIAL ANCESTOR OF UBIQUITIN E1 INI BIOSYNTHESIS OF THE MICROCIN C7 ANTIBIOTIC. EMBO J. V. 28 1953 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MET ARG THR GLY ASN ALA XSN E:1;
F:1;
G:1;
H:1;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
763.855 n/a S(CCC...
SO4 A:501;
B:501;
B:502;
C:501;
C:502;
D:501;
D:502;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
ZN A:500;
B:500;
C:500;
D:500;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3H5N 1.9 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF E. COLI MCCB + ATP ESCHERICHIA COLI UBIQUITIN-ACTIVATING ENZYME MICROCIN PROTEIN STRUCTURE MCPEPTIDE ANTIBIOTICS N-P BOND FORMATION TRANSFERASE
Ref.: HOW THE MCCB BACTERIAL ANCESTOR OF UBIQUITIN E1 INI BIOSYNTHESIS OF THE MICROCIN C7 ANTIBIOTIC. EMBO J. V. 28 1953 2009
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 3H5R - MET ARG THR GLY ASN ALA SNN n/a n/a
2 3H9J - MSE ARG THR GLY ASN ALA ASN n/a n/a
3 3H9G - MET ARG THR GLY ASN ALA XSN n/a n/a
4 3H5N - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 3H5R - MET ARG THR GLY ASN ALA SNN n/a n/a
2 3H9J - MSE ARG THR GLY ASN ALA ASN n/a n/a
3 3H9G - MET ARG THR GLY ASN ALA XSN n/a n/a
4 3H5N - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 3H5R - MET ARG THR GLY ASN ALA SNN n/a n/a
2 3H9J - MSE ARG THR GLY ASN ALA ASN n/a n/a
3 3H9G - MET ARG THR GLY ASN ALA XSN n/a n/a
4 3H5N - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: MET ARG THR GLY ASN ALA XSN; Similar ligands found: 26
No: Ligand ECFP6 Tc MDL keys Tc
1 MET ARG THR GLY ASN ALA XSN 1 1
2 ASN ARG LEU MET LEU THR GLY 0.529915 0.948276
3 GLU ARG GLY MET THR 0.526316 0.912281
4 MET ABA LEU ARG MET THR ALA VAL MET 0.519685 0.866667
5 MET CYS LEU ARG MET THR ALA VAL MET 0.496183 0.898305
6 MET ALA ARG 0.495146 0.824561
7 MET CYS LEU ARG NLE THR ALA VAL MET 0.485075 0.883333
8 ARG ARG ALA THR LYS MET NH2 0.471545 0.881356
9 GLN ARG ALA THR LYS MET NH2 0.464567 0.881356
10 THR PRO ARG VAL THR GLY GLY GLY ALA MET 0.448276 0.763889
11 ARG ARG ALA ALA 0.447619 0.754386
12 GLU ALA GLN THR ARG LEU 0.444444 0.844828
13 MET CYS PRO ARG MET THR ALA VAL MET 0.442177 0.760563
14 ARG ARG GLY MET NH2 0.436364 0.810345
15 SER LEU SER ARG THR PRO ALA ASP GLY ARG 0.425676 0.704225
16 LYS ALA ARG VAL LEU ALA GLU ALA MET SER 0.425373 0.827586
17 LYS ALA ARG VAL LEU ALA GLU ALA MET 0.425373 0.827586
18 ACE GLU ALA GLN THR ARG LEU 0.414062 0.830508
19 ARG GLY ASP ILE ASN ASN ASN VAL 0.410853 0.847458
20 ARG LEU GLN ARG ARG ARG GLU THR GLN VAL 0.410853 0.847458
21 LEU GLY GLY ALA LYS GLN ARG GLY ASP VAL 0.410853 0.75
22 ALA ARG THR ALA ALA THR ALA ARG LYS SER 0.410256 0.824561
23 ARG TYR GLY PHE VAL ALA ASN PHE 0.409722 0.769231
24 ALA ARG 9AT 0.407767 0.807018
25 LEU GLU LYS ALA ARG GLY SER THR TYR 0.4 0.787879
26 ALA ARG THR M3L GLN THR ALA ARG 0.4 0.80303
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3H5N; Ligand: ATP; Similar sites found with APoc: 834
This union binding pocket(no: 1) in the query (biounit: 3h5n.bio1) has 23 residues
No: Leader PDB Ligand Sequence Similarity
1 4J4H NAI 1.1583
2 4J4H 1J1 1.1583
3 4JK3 NAD 1.1583
4 3GEG NAD 1.21457
5 4Q9N NAI 1.34228
6 5WUW NAP 1.39373
7 1F8G NAD 1.41643
8 1PL6 572 1.41643
9 1PL6 NAD 1.41643
10 1L7E NAI 1.41643
11 4J6C STR 1.41643
12 2GZ3 NAP 1.41643
13 5THQ NDP 1.47059
14 3L4S NAD 1.4881
15 3L4S 3PG 1.4881
16 1V6A TRE 1.50602
17 2ZAT NAP 1.53846
18 5E9W SAH 1.60256
19 1EDO NAP 1.63934
20 1XHL NDP 1.6835
21 1COY AND 1.69972
22 1COY FAD 1.69972
23 6F3M NAD 1.69972
24 6F3N NAD 1.69972
25 6F3N ADN 1.69972
26 5FJN FAD 1.69972
27 5FJN BE2 1.69972
28 1GPE FAD 1.69972
29 2RAB NAD 1.69972
30 2RAB FAD 1.69972
31 5BUK FAD 1.69972
32 4IV9 FAD 1.69972
33 2JB2 PHE 1.69972
34 2JB2 FAD 1.69972
35 2XVE FAD 1.69972
36 2XVF FAD 1.69972
37 2JJQ SAH 1.69972
38 3NT6 FAD 1.69972
39 2E5V FAD 1.69972
40 3NTA FAD 1.69972
41 1NFQ NAI 1.69972
42 1M2W NAD 1.69972
43 5OCM NAP 1.71821
44 1ORR NAD 1.72911
45 1TPY SAH 1.74216
46 4Z0H NAD 1.79641
47 1J0X NAD 1.80723
48 3HVJ 705 1.80995
49 5Y1G AKB 1.82927
50 5Y1G NAD 1.82927
51 1OMO NAD 1.86335
52 2PK3 A2R 1.86916
53 1EZ4 NAD 1.88679
54 4KWI NAP 1.90114
55 4KWI 1TJ 1.90114
56 4OSP NAP 1.90114
57 1QG6 NAD 1.91571
58 1QG6 TCL 1.91571
59 3TN7 NJP 1.94553
60 5OVK NDP 1.95312
61 4Y9D NAI 1.96721
62 6F97 FAD 1.983
63 5MBX SP5 1.983
64 5MBX FAD 1.983
65 4RQU NAD 1.983
66 1H9A NAP 1.983
67 1LCF OXL 1.983
68 1XSE NDP 2.0339
69 3LZW NAP 2.10843
70 3LZW FAD 2.10843
71 5LOG SAH 2.14592
72 5G3U ITW 2.26629
73 5ZBC FAD 2.26629
74 5G3U FDA 2.26629
75 4X9M FAD 2.26629
76 3NYC IAR 2.26629
77 3NYC FAD 2.26629
78 5MZI FYK 2.26629
79 5MZI FAD 2.26629
80 5Y77 FAD 2.26629
81 3T31 DCQ 2.26629
82 3T31 FAD 2.26629
83 3QVP FAD 2.26629
84 1BXK NAD 2.26629
85 1KNR FAD 2.26629
86 3UCL FAD 2.26629
87 3UCL NAP 2.26629
88 3UCL CYH 2.26629
89 4D04 FAD 2.26629
90 4D04 NAP 2.26629
91 1K3T BRZ 2.26629
92 3UOY FAD 2.26629
93 3UOY NAP 2.26629
94 1VKO NAD 2.26629
95 5A7Y SAH 2.26629
96 6GAR FAD 2.29226
97 6ARJ BW4 2.29226
98 4XUC SAM 2.29358
99 4XUC 43G 2.29358
100 4GKY MAN 2.29885
101 3W9F I3P 2.30769
102 6CI9 NAP 2.3166
103 1NVM NAD 2.31884
104 2VT3 ATP 2.32558
105 3QJ4 FAD 2.33918
106 3ITJ FAD 2.36686
107 2C29 DQH 2.37389
108 2C29 NAP 2.37389
109 6GNC FAD 2.38095
110 3O03 NAP 2.4055
111 3H4V NAP 2.43056
112 3H4V DVP 2.43056
113 1L1E SAH 2.43902
114 1KPG SAH 2.43902
115 1KPH SAH 2.43902
116 3HB5 NAP 2.44648
117 5Z75 NAD 2.44648
118 1ZBQ NAD 2.44648
119 2Q7V FAD 2.46154
120 5YJF 8WO 2.46479
121 5YJF SAH 2.46479
122 5UAV NDP 2.48447
123 5UAV TFB 2.48447
124 1E7S NAP 2.49221
125 1GZ6 NAI 2.50784
126 3SJU NDP 2.50896
127 5BSH PRO 2.52708
128 2B4Q NAP 2.53623
129 5HSA FAS 2.54958
130 3G5S FAD 2.54958
131 5TOW ADN 2.54958
132 5TOW NAI 2.54958
133 2IXB A2G 2.54958
134 5FEU NAP 2.54958
135 1KEW NAD 2.54958
136 1KEW TYD 2.54958
137 2IXB NAD 2.54958
138 2GMH FAD 2.54958
139 3V1U NAD 2.54958
140 2O4C NAD 2.54958
141 2NAD NAD 2.54958
142 3NKS FAD 2.54958
143 2GSD NAD 2.54958
144 5J7X FAD 2.54958
145 4JX1 CAH 2.54958
146 3HQP OXL 2.54958
147 3GMB FAD 2.54958
148 5HXI FAD 2.54958
149 1N7G NDP 2.54958
150 1X7D ORN 2.57143
151 1X7D NAD 2.57143
152 3CBG SAH 2.58621
153 2B4R NAD 2.6087
154 2B4R AES 2.6087
155 1LVL FAD 2.62009
156 1LVL NAD 2.62009
157 4MP8 MLI 2.65487
158 4MP8 NAD 2.65487
159 4GKV NAD 2.67857
160 3KB6 NAD 2.69461
161 1CER NAD 2.71903
162 1GAD NAD 2.72727
163 1A27 NAP 2.76817
164 4J7U YTZ 2.77778
165 4J7U NAP 2.77778
166 4TQG NDP 2.78638
167 4LH7 1X8 2.78638
168 3G89 SAM 2.81124
169 5OC1 FAD 2.83286
170 4YNU LGC 2.83286
171 4YNU FAD 2.83286
172 3WGT FAD 2.83286
173 3WGT QSC 2.83286
174 1BW9 NAD 2.83286
175 2WPF WPF 2.83286
176 2WPF FAD 2.83286
177 3CIF G3H 2.83286
178 3GDN HBX 2.83286
179 3GDN FAD 2.83286
180 5MLR NAP 2.83286
181 5MLR GRQ 2.83286
182 1AE1 NAP 2.83286
183 6EL3 NAP 2.83286
184 1HKU NAD 2.83286
185 1BXG NAD 2.83286
186 4MO2 FAD 2.83286
187 4MO2 FDA 2.83286
188 1C1X NAD 2.83286
189 5WGR FAD 2.83286
190 3CIF NAD 2.83286
191 6D6Y SAH 2.83286
192 3ETG GTP 2.83286
193 5TUK FAD 2.83286
194 3ETG GLU 2.83286
195 3ETG NDP 2.83286
196 6C4T NA7 2.83286
197 2JAP NDP 2.83401
198 2JAH NDP 2.83401
199 4O1M NAD 2.85714
200 3GFB NAD 2.85714
201 4UP3 NDP 2.86624
202 4UP3 FAD 2.86624
203 4FC7 COA 2.88809
204 4FC7 NAP 2.88809
205 1FL2 FAD 2.90323
206 1HYH NAD 2.91262
207 6A3J NAI 2.92683
208 6A3J SOE 2.92683
209 3WLE NAD 2.93255
210 3GD4 FAD 2.93542
211 3GD4 NAD 2.93542
212 1P77 ATR 2.94118
213 3V1Y NAD 2.96736
214 4M73 M72 2.96736
215 4M73 SAH 2.96736
216 1YXM ADE 2.9703
217 1YJQ NAP 2.9703
218 1JG3 ADN 2.97872
219 1VL8 NAP 2.99625
220 1DSS NAD 3.003
221 1J49 NAD 3.003
222 5XWV NDP 3.02419
223 5XWV 8H6 3.02419
224 1D7O TCL 3.0303
225 1D7O NAD 3.0303
226 2VHW NAI 3.11615
227 1GR0 NAD 3.11615
228 5GSN FAD 3.11615
229 5GSN NAP 3.11615
230 1BZL GCG 3.11615
231 5GSN MMZ 3.11615
232 2IVD FAD 3.11615
233 5DF1 58X 3.11615
234 5DF1 NAP 3.11615
235 1BZL FAD 3.11615
236 5ZYN FAD 3.11615
237 6ER9 NAP 3.11615
238 6ER9 FAD 3.11615
239 3K7M FAD 3.11615
240 1MV8 NAD 3.11615
241 1MUU NAD 3.11615
242 4AT0 FAD 3.11615
243 3ABI NAD 3.11615
244 4D3F NAP 3.11615
245 4XYB NDP 3.11615
246 1R6B ADP 3.11615
247 1OBB NAD 3.11615
248 4UCF GLA 3.11615
249 2DKN NAI 3.13725
250 4ZA2 NAD 3.16206
251 4D42 W0I 3.19149
252 4D42 NAP 3.19149
253 5YU3 NAD 3.19767
254 5YU3 PRO 3.19767
255 2G5C NAD 3.20285
256 3DXY SAM 3.21101
257 2EWM NAD 3.21285
258 1LLU NAD 3.21637
259 3NUG NAD 3.23887
260 3OFK SAH 3.24074
261 2AG5 NAD 3.25203
262 2PD4 NAD 3.27273
263 2PD4 DCN 3.27273
264 1PR9 NAP 3.27869
265 3D3W NAP 3.27869
266 4B4U NAP 3.30033
267 5N6C NAD 3.33333
268 1JNR FAD 3.33333
269 4K5S PM0 3.35821
270 4K5S FAD 3.35821
271 4XQC 13D 3.39943
272 4XQC NAD 3.39943
273 3AB1 FAD 3.39943
274 2DKH 3HB 3.39943
275 2DKH FAD 3.39943
276 4B63 ORN 3.39943
277 4B63 NAP 3.39943
278 4B63 FAD 3.39943
279 5KOX RFP 3.39943
280 5KOX FAD 3.39943
281 4M52 M52 3.39943
282 3LAD FAD 3.39943
283 5FI3 NAP 3.39943
284 1BDB NAD 3.39943
285 6FHO FAD 3.39943
286 1XKQ NDP 3.39943
287 4RPL 3UC 3.39943
288 4RPL FAD 3.39943
289 3GGO NAI 3.39943
290 3GGO ENO 3.39943
291 4M52 FAD 3.39943
292 4D7E FAD 3.39943
293 1WP4 NDP 3.46021
294 2CVZ NDP 3.46021
295 3JQF NAP 3.47222
296 5K6A NAP 3.47222
297 4CM9 NAP 3.47222
298 3BMN NAP 3.47222
299 4CLO NAP 3.47222
300 4CMI NAP 3.47222
301 3JQ9 NAP 3.47222
302 3BMQ NAP 3.47222
303 5JCJ NAP 3.47222
304 5JDC NAP 3.47222
305 4CM8 NAP 3.47222
306 3JQ7 NAP 3.47222
307 5JDI NAP 3.47222
308 4CLR NAP 3.47222
309 4CME NAP 3.47222
310 3BMO NAP 3.47222
311 4CM4 NAP 3.47222
312 3JQA NAP 3.47222
313 3JQG NAP 3.47222
314 3JQ8 NAP 3.47222
315 3OID NDP 3.48837
316 3A28 NAD 3.48837
317 5FFF NAP 3.50195
318 5FFF 5XC 3.50195
319 1ZQ9 SAM 3.50877
320 1RM4 NDP 3.56083
321 2F1K NAP 3.58423
322 3ORF NAD 3.58566
323 2RH4 EMO 3.61011
324 6BQ6 TER 3.62538
325 1JA9 NDP 3.64964
326 6BWL NAD 3.65854
327 1D4D FAD 3.67133
328 1Q9I TEO 3.67776
329 1Q9I FAD 3.67776
330 2IID PHE 3.68272
331 2IID FAD 3.68272
332 4CNK FAD 3.68272
333 1V59 NAD 3.68272
334 4U8P UDP 3.68272
335 4U8P FDA 3.68272
336 4AP3 FAD 3.68272
337 4AP3 NAP 3.68272
338 2HQM FAD 3.68272
339 2AQJ FAD 3.68272
340 2AQJ TRP 3.68272
341 1V59 FAD 3.68272
342 1U3U BNF 3.68272
343 1U3U NAD 3.68272
344 3CGB FAD 3.68272
345 3FWN ATR 3.68272
346 1WVG APR 3.68272
347 4ZGS NAD 3.68272
348 2VZ0 D64 3.73134
349 2VZ0 NAP 3.73134
350 2WD7 NAP 3.73134
351 1P0F NAP 3.75335
352 3H9E NAD 3.75723
353 3OIG NAD 3.7594
354 2FK8 SAM 3.77358
355 2DTX BMA 3.78788
356 6GNA FAD 3.81944
357 5JWC FAD 3.83877
358 5W7M SAH 3.84615
359 5YJI SAH 3.87324
360 5YJI 8WO 3.87324
361 1G0N PHH 3.88693
362 1G0N NDP 3.88693
363 4NBW NAD 3.89105
364 5EJ2 NAD 3.8961
365 5YSS NAD 3.90625
366 5K0A FAD 3.93939
367 2IZ1 ATR 3.96601
368 4MOP 2H5 3.96601
369 1H2B NAJ 3.96601
370 4W6Z 8ID 3.96601
371 5TS5 FAD 3.96601
372 2YG3 FAD 3.96601
373 5BRT CH9 3.96601
374 5BRT FAD 3.96601
375 6C4N NAP 3.96601
376 2ZXI FAD 3.96601
377 5UAO FAD 3.96601
378 1U1I NAD 3.96601
379 4YRY FAD 3.98551
380 4YRY NAD 3.98551
381 1MXH DHF 3.98551
382 1MXH NAP 3.98551
383 1OC2 NAD 4.02299
384 1OC2 TDX 4.02299
385 5JE0 SAH 4.04858
386 5JE0 AZ8 4.04858
387 5T9E NAP 4.05904
388 5T9F TYR 4.05904
389 5T9F NAP 4.05904
390 5Z2L NDP 4.08163
391 1ZH8 NAP 4.11765
392 5OJI ISN 4.23077
393 5OJI NAP 4.23077
394 5TTJ FAD 4.24929
395 1PS9 FAD 4.24929
396 3CGD COA 4.24929
397 3CGD FAD 4.24929
398 2R4J FAD 4.24929
399 2R4J 13P 4.24929
400 5JY6 NAD 4.24929
401 3CGD NAD 4.24929
402 2WET FAD 4.24929
403 1PS9 NAP 4.24929
404 3B1F NAD 4.24929
405 1Z6Z NAP 4.25532
406 3ZV6 4HB 4.27046
407 3ZV6 NAD 4.27046
408 3TWO NDP 4.31034
409 2BGM NAJ 4.31655
410 3PA8 621 4.33071
411 1KYQ NAD 4.37956
412 6F9Q NAD 4.41176
413 3FUU ADN 4.42804
414 4OHU NAD 4.49827
415 4OHU 2TK 4.49827
416 1GV0 NAD 4.51613
417 6GAS FAD 4.53172
418 1YKJ FAD 4.53258
419 1YKJ PHB 4.53258
420 4MIG G3F 4.53258
421 2NVK NAP 4.53258
422 6F7L FAD 4.53258
423 2NVK FAD 4.53258
424 3SJ7 NDP 4.53258
425 3MAG SAH 4.56026
426 2AG8 NAP 4.56274
427 5E1M PRO PRO LYS ARG ILE ALA 4.56432
428 5E1M SAH 4.56432
429 1SOW NAD 4.57317
430 1ZEM NAD 4.58015
431 1E3W NAD 4.5977
432 1R37 NAD 4.61095
433 1E6W NAD 4.61538
434 1W8D NAP 4.63576
435 1W73 NAP 4.63576
436 1W6U NAP 4.63576
437 3E1T FAD 4.6875
438 3MCT SAH 4.7138
439 3RJ5 NAD 4.72441
440 2HK9 ATR 4.72727
441 2HK9 NAP 4.72727
442 4L8V NAP 4.74777
443 6CEP OXM 4.79042
444 6CEP NAD 4.79042
445 2VYN NAD 4.79042
446 1C0I BE2 4.81586
447 1C0I FAD 4.81586
448 5M67 NAD 4.81586
449 5M67 ADE 4.81586
450 5M67 3D1 4.81586
451 1SC6 NAD 4.81586
452 1KOL NAD 4.81586
453 1ZK7 FAD 4.81586
454 4JDR FAD 4.81586
455 3Q9T FAY 4.81586
456 3SSO SAH 4.81586
457 1O0S NAI 4.81586
458 1YQD NAP 4.81586
459 4G5H UD7 4.81586
460 4G5H NAP 4.81586
461 1EBF NAD 4.81586
462 2GCG NDP 4.84848
463 1N5D NDP 4.86111
464 1NVT NAP 4.87805
465 1ELI PYC 4.88432
466 5K4W NAI 4.98442
467 5K4W THR 4.98442
468 4USR FAD 4.98615
469 3A4V NAD 5.04732
470 3A4V PYR 5.04732
471 3OJF IMJ 5.05837
472 3OJF NDP 5.05837
473 1RM0 NAI 5.06567
474 1RM0 D6P 5.06567
475 2DC1 NAD 5.08475
476 3MB5 SAM 5.09804
477 1YY5 FAD 5.09915
478 1RSG FAD 5.09915
479 4FWE FAD 5.09915
480 2RGO FAD 5.09915
481 2RGH FAD 5.09915
482 1VJT NAD 5.09915
483 1EWK GLU 5.09915
484 1F8F NAD 5.09915
485 3QWI NAP 5.18518
486 3QWI CUE 5.18518
487 4J56 FAD 5.26316
488 5JE8 NAD 5.29801
489 5GT9 NAP 5.32319
490 3RKR NAP 5.34351
491 4ZCC NAI 5.35714
492 4ZCC FAD 5.35714
493 1U7T TDT 5.36398
494 1U7T NAD 5.36398
495 1XG5 NAP 5.37634
496 5OFW 9TW 5.38117
497 2Z3Y F2N 5.38244
498 2RGJ FAD 5.38244
499 4RSL FAD 5.38244
500 2V6G NAP 5.38244
501 1GZ4 ATP 5.38244
502 5YAP NAI 5.38244
503 1I8T FAD 5.38244
504 5YAP 8S0 5.38244
505 5T67 JHZ 5.38244
506 3CMC NAD 5.38922
507 2YY7 NAD 5.44872
508 1EK6 UPG 5.45977
509 1EK6 NAI 5.45977
510 3ZNN 4WL 5.4755
511 3ZNN FAD 5.4755
512 5NII FAD 5.50162
513 5Z20 NAI 5.50725
514 2Y6Q FAD 5.52764
515 2Y6Q I7T 5.52764
516 3F8D FAD 5.57276
517 1O6Z NAD 5.61056
518 5DM1 5D7 5.61798
519 5DM1 SAH 5.61798
520 1UDB UFG 5.6213
521 1UDB NAD 5.6213
522 6AA8 NAD 5.62914
523 2FZW NAD 5.63003
524 5NA1 FAD 5.63725
525 4URF NAD 5.64516
526 1H5Q NAP 5.66038
527 1REO FAD 5.66572
528 1X14 NAD 5.66572
529 1H82 GZZ 5.66572
530 1H82 FAD 5.66572
531 4OPC FDA 5.66572
532 4OPC PGT 5.66572
533 2B9W FAD 5.66572
534 1FEC FAD 5.66572
535 1GQ2 NAP 5.66572
536 5U8U FAD 5.66572
537 4USQ FAD 5.66572
538 4O0L NDP 5.66572
539 2CDC NAP 5.66572
540 2CDC XYP 5.66572
541 3FG2 FAD 5.66572
542 2CDC XYS 5.66572
543 3NDJ JHZ 5.66572
544 3NDJ SAH 5.66572
545 5MQ6 NDP 5.66572
546 2A14 SAH 5.66572
547 1LSS NAD 5.71429
548 4YAC NAI 5.72391
549 5U5G NAP 5.76271
550 3KO8 NAD 5.76923
551 5B4T NAD 5.76923
552 5B4T 3HR 5.76923
553 1LDM NAD 5.77508
554 5ZW3 SAH 5.77778
555 5TWB FAD 5.81395
556 4NBT NAD 5.83333
557 3VZS CAA 5.83658
558 3VZS NAP 5.83658
559 2Q2V NAD 5.88235
560 2JHF NAD 5.94901
561 5NMX NAP 5.94901
562 5NMX FAD 5.94901
563 1Z45 NAD 5.94901
564 2YVF NAD 5.94901
565 2YVF FAD 5.94901
566 2YVJ FAD 5.94901
567 3GF4 FAD 5.94901
568 2YVJ NAI 5.94901
569 3GF4 UPG 5.94901
570 4PLG NAI 5.98802
571 4PLG OXM 5.98802
572 1EQ2 NAP 6.12903
573 2WYV NAD 6.13027
574 4KFU ACP 6.13208
575 2BD0 NAP 6.14754
576 5N53 8NB 6.15385
577 4NTD FAD 6.17647
578 1UAY ADN 6.19835
579 5XVH NAP 6.20915
580 2A92 NAI 6.23053
581 3QV1 NAD 6.23145
582 1UWK URO 6.23229
583 1UWK NAD 6.23229
584 5YB7 FAD 6.23229
585 5YB7 ORN 6.23229
586 3OZ2 FAD 6.23229
587 5Z21 NAI 6.23229
588 4REP FAD 6.23229
589 1GET FAD 6.23229
590 1GET NAP 6.23229
591 5LD5 NAD 6.23229
592 3HDY FAD 6.23229
593 4GLL NAD 6.23229
594 3HDY FDA 6.23229
595 3HDY GDU 6.23229
596 2F5Z FAD 6.25
597 1SB8 NAD 6.25
598 1SB8 UD2 6.25
599 5J60 FAD 6.25
600 2A8X FAD 6.25
601 4YMH SAH 6.25
602 4J36 1HR 6.26506
603 4J36 FAD 6.26506
604 6DUB SAH 6.30631
605 4PLT OXM 6.34441
606 4PLT NAI 6.34441
607 1IY8 NAD 6.36704
608 1E3I CXF 6.38298
609 2QA1 FAD 6.4
610 4YSX FAD 6.41026
611 5T2U NAP 6.45161
612 1UXG NAD 6.47249
613 1UXG FUM 6.47249
614 2VVM FAD 6.51558
615 3ICT ADP 6.51558
616 4TXI FAD 6.51558
617 2VVL FAD 6.51558
618 5I39 FAD 6.51558
619 3ICT FAD 6.51558
620 5BVA FAD 6.51558
621 3ICS FAD 6.51558
622 3ICR FAD 6.51558
623 3LU1 NAD 6.51558
624 3ICS ADP 6.51558
625 1T26 NAI 6.52174
626 1T26 GBD 6.52174
627 1VDC FAD 6.60661
628 1FK8 NAD 6.61479
629 2DFV NAD 6.62824
630 1NYT NAP 6.64207
631 3CH6 NAP 6.64336
632 3CH6 311 6.64336
633 1LDN NAD 6.64557
634 1PZG A3D 6.64653
635 2GDZ NAD 6.74157
636 3LXD FAD 6.74699
637 4OM8 NAD 6.79612
638 1GTE FAD 6.79887
639 1GY8 NAD 6.79887
640 5O9F NAD 6.81818
641 5O9F 9ON 6.81818
642 4HA6 FAD 6.88976
643 9LDB NAD 6.92771
644 9LDT NAD 6.92771
645 1HDR NAD 6.96721
646 1D1T NAD 6.97051
647 1X87 NAD 7.08215
648 5MPT SAH 7.08215
649 1CDO NAD 7.08215
650 1GUZ NAD 7.08215
651 2NXE SAM 7.08661
652 1R6D NAD 7.12166
653 1R6D DAU 7.12166
654 1VL0 NAI 7.19178
655 4ZVV NAD 7.22892
656 4ZVV GN0 7.22892
657 3OND ADN 7.36544
658 3OND NAD 7.36544
659 5TUF FAD 7.36544
660 5TUF TDC 7.36544
661 4YKG NAD 7.36544
662 4YKG FAD 7.36544
663 5BW4 SAM 7.49064
664 2EV9 SKM 7.60456
665 2EV9 NAP 7.60456
666 4Z24 FAD 7.64873
667 1MO9 KPC 7.64873
668 1MO9 FAD 7.64873
669 1E5Q NDP 7.64873
670 2GKS ADP 7.64873
671 1OAA OAA 7.72201
672 5WXU FLC 7.72443
673 2GN4 NDP 7.84884
674 2GN4 UD1 7.84884
675 4BV6 FAD 7.93201
676 4EDF UPG 7.93201
677 4J1Q NDP 7.93201
678 4CQM NAP 8.04598
679 2GAG FAD 8.08081
680 2GAG FOA 8.08081
681 2GAG NAD 8.08081
682 1XCL SAH 8.08511
683 3AYI FAD 8.2153
684 3AYI HCI 8.2153
685 4EMI NAD 8.2153
686 4EMI FAD 8.2153
687 2NPX NAD 8.2153
688 2NPX FAD 8.2153
689 6FP4 E1T 8.2153
690 6FP4 FAD 8.2153
691 4BJZ FAD 8.2153
692 4BJZ P3A 8.2153
693 2HJR APR 8.23171
694 4YAG NAI 8.3045
695 1LTH NAD 8.46395
696 5Y8L HUI 8.47458
697 5Y8L NAD 8.47458
698 2PZM NAD 8.48485
699 2PZM UDP 8.48485
700 2Q1S NAI 8.48806
701 2ZJ1 ARJ 8.49858
702 2ZJ1 NAD 8.49858
703 3NTD FAD 8.49858
704 1KEV NDP 8.54701
705 1SNY NAP 8.61423
706 2Q1W NAD 8.70871
707 3KLJ FAD 8.78187
708 1PJS NAD 8.78187
709 1RKX NAD 8.78187
710 3RFV NAI 8.98876
711 3RFV 15L 8.98876
712 5X68 FAD 9.06516
713 1DLJ NAI 9.06516
714 1DLJ UGA 9.06516
715 4NBU NAI 9.2
716 3EGI ADP 9.2233
717 2FR1 NDP 9.25926
718 4ZRN NAD 9.29487
719 4ZRN UPG 9.29487
720 1V8B NAD 9.34844
721 4C3Y FAD 9.34844
722 4C3Y ANB 9.34844
723 3QFA FAD 9.48276
724 1P1C SAH 9.54774
725 5XNC MTA 9.63173
726 3C3Y SAH 9.70464
727 3AXB PRO 9.91501
728 3AXB FAD 9.91501
729 2CFC NAD 10
730 1NAA 6FA 10.1983
731 1NAA ABL 10.1983
732 5VN0 NAI 10.1983
733 5VN0 FAD 10.1983
734 4E5N NAD 10.303
735 3RNM FAD 10.3448
736 4ITU 1HS 10.4089
737 4ITU NAI 10.4089
738 4II2 ATP 10.4816
739 2WSB NAD 10.6299
740 3AFN NAP 10.8527
741 5EOW FAD 10.8642
742 3CTY FAD 10.9718
743 2AE2 PTO 11.0482
744 2AE2 NAP 11.0482
745 2C5A GDC 11.0482
746 2C5A NAD 11.0482
747 1HDG NAD 11.0482
748 5UR0 NAD 11.0482
749 2OBF SAH 11.0727
750 2OBF F83 11.0727
751 2D2I NAP 11.3158
752 2CDU FAD 11.3314
753 2CDU ADP 11.3314
754 5KVA SAM 11.5108
755 1X1T NAD 11.5385
756 6H3O FAD 11.6147
757 1YQZ FAD 11.6147
758 2CUL FAD 11.6147
759 5O42 9JW 11.6788
760 5O42 BGC 11.6788
761 5O42 NAD 11.6788
762 1GEG NAD 11.7188
763 1E6E FAD 11.898
764 1E1M NAP 11.898
765 1E1M FAD 11.898
766 3X0V FAD 11.898
767 5ODQ FAD 12.1429
768 1UZN NAP 12.1457
769 5J5Z FAD 12.1813
770 3NJ4 NAD 12.4646
771 3NJ4 AFX 12.4646
772 3B1J NAD 12.6844
773 3B20 NAD 12.6844
774 4YCA NDP 12.9252
775 3SQP FAD 13.0312
776 4DSG FAD 13.0312
777 4DSG UDP 13.0312
778 1DJN ADP 13.0312
779 1O94 ADP 13.0312
780 2Q0L FAD 13.1833
781 1PN0 FAD 13.3144
782 1PN0 IPH 13.3144
783 3S5W FAD 13.3144
784 3S5W NAP 13.3144
785 6DNT NAD 13.3721
786 1J5P NAD 13.4387
787 5MIT FAD 13.881
788 5MIT NAP 13.881
789 1TDF FAD 13.9241
790 1TDF NAP 13.9241
791 3K8D KDO 14.0152
792 1QO8 FAD 14.1643
793 1Q1R FAD 14.1643
794 5YEC ATP 14.4118
795 4HSU FAD 14.5161
796 4GUS FAD 14.5161
797 4GUT FAD 14.5161
798 3HAD NAD 14.6104
799 3AD8 PYC 14.8515
800 3AD8 FAD 14.8515
801 3AD8 NAD 14.8515
802 5ZZ6 ADP 14.9038
803 5ZZ6 NAD 14.9038
804 2OOR NAD 14.9425
805 4FN4 NAD 14.9606
806 1RYI GOA 15.2975
807 1RYI FAD 15.2975
808 2DT5 NAD 15.6398
809 3GRU AMP 16.2712
810 2OFW ADX 16.3462
811 1NM5 NAD 16.7488
812 1NM5 NAP 16.7488
813 4RDI ATP 17.0139
814 4RDH AMP 17.0139
815 2C7G ODP 17.2805
816 2C7G FAD 17.2805
817 3T7S SAM 18.6567
818 4D79 ATP 18.9802
819 1NNU TCT 20
820 1NNU NAD 20
821 3VPH OXM 20.3226
822 3VPH NAD 20.3226
823 1XHC FAD 21.2534
824 5X20 NAD 21.4744
825 5GWT SIN 21.9424
826 5GWT NAD 21.9424
827 1Y8Q ATP 22.0963
828 5JCA FAD 22.5352
829 5JCA NDP 22.5352
830 3WMX NAD 23.1844
831 1A5Z NAD 31.0345
832 2HMT NAI 31.25
833 3H8V ATP 33.9041
834 5L95 AMP 34.0502
Pocket No.: 2; Query (leader) PDB : 3H5N; Ligand: ATP; Similar sites found with APoc: 98
This union binding pocket(no: 2) in the query (biounit: 3h5n.bio1) has 53 residues
No: Leader PDB Ligand Sequence Similarity
1 3AQZ BGC BGC BGC BGC BGC BGC None
2 6B79 ORA None
3 2HO2 PRO PRO PRO PRO PRO PRO PRO PRO PRO LEU None
4 5CG1 NAD BBN 1.63934
5 5OVL NAP 1.66667
6 4GCZ FMN 1.69972
7 1LJ8 NAD 1.69972
8 5TC4 NAD 1.89873
9 1OFZ FUC 1.92308
10 4EE7 PIS 1.97368
11 5OJL TXP 2.01342
12 5A1T NAI 2.05279
13 5A1T OXM 2.05279
14 1LSH PLD 2.19436
15 6GNO XDI 2.22222
16 3K5I AIR 2.26629
17 3P7N FMN 2.26629
18 4RD0 GDP 2.26629
19 2VD9 IN5 2.26629
20 2VD9 EPC 2.26629
21 4O9S 2RY 2.32558
22 3T50 FMN 2.34375
23 4XB2 NDP 2.38806
24 4RF7 ARG 2.54958
25 3T4L ZEA 2.59259
26 4E13 NAD 2.82686
27 4IMO PWZ 2.84091
28 3P2H NOO 2.98507
29 4KBA 1QM 3.02115
30 2WEI VGG 3.13589
31 5F8F SFG 3.39943
32 2AOT SAH 3.42466
33 1F9V ADP 3.45821
34 3JQB NAP 3.47222
35 4MOB ADP 3.68272
36 5WP5 SAH 3.68272
37 4DG8 AMP 3.96601
38 5N5D SAM 3.9823
39 1QKQ MAN 4.22535
40 6E1Q CFA 4.24929
41 1YFS ALA 4.24929
42 5T7I LAT NAG GAL 4.51613
43 2DBZ NAP 4.53258
44 2PR5 FMN 4.54545
45 1YUM NCN 4.54545
46 3RGA LSB 4.59364
47 5GZ6 NDP 4.60123
48 6GBV FMN 4.79452
49 5TSH ANP 4.81586
50 5JGL SAM 4.84429
51 4R38 RBF 5
52 1C9K 5GP 5
53 5AOV NAP 5.05952
54 4OIT MAN 5.30973
55 1VI2 NAD 5.33333
56 3DUW SAH 5.38117
57 1SDW IYT 5.38244
58 1KJ1 MAN 5.50459
59 3SXS PP2 5.59701
60 5FPE 3TR 5.66572
61 6BII NAP 6.00601
62 2P7Q GG6 6.01504
63 1UYY BGC BGC 6.10687
64 1DIG NAP 6.20915
65 1N9L FMN 6.42202
66 4RUS NAG 6.51558
67 4RUS NDG 6.51558
68 1WDK NAD 6.51558
69 2WKQ FMN 6.62651
70 5AYV NAP 6.79612
71 1QY1 PRZ 6.89655
72 3SAO DBH 7.5
73 5C03 AGS 7.64873
74 4COQ SAN 7.69231
75 4EES FMN 7.82609
76 4YLZ LAT NAG GAL 7.84314
77 5H9Q TD2 8.3871
78 1IIU RTL 8.62069
79 5Y4R C2E 8.84354
80 5XLX SAH 9.21986
81 4JJF FE9 9.30233
82 2Z6C FMN 10.0775
83 2GC0 PAN 10.1064
84 1X8X TYR 10.4816
85 1XVB BHL 10.5882
86 4JH6 FCN 10.8696
87 4WUJ FMN 11.5646
88 1J3R 6PG 12.1053
89 2QL9 CIT 12.1387
90 5HWV MBN 12.3077
91 5H9P TD2 14.557
92 1GQG DCD 14.5714
93 2BOS GLA GAL GLC 14.7059
94 2BOS GLA GAL 14.7059
95 1DZK PRZ 15.9236
96 5ODY 9SK 16.6667
97 6EWZ APC 18.9873
98 2Z6D FMN 20
Pocket No.: 3; Query (leader) PDB : 3H5N; Ligand: ATP; Similar sites found with APoc: 79
This union binding pocket(no: 3) in the query (biounit: 3h5n.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 5O98 NAP 1.57729
2 1Q0H NDP 1.69972
3 1Q0H FOM 1.69972
4 5A04 NDP 1.76991
5 5A04 BGC 1.76991
6 4PVD NDP 2.04678
7 5G4L NDP 2.0979
8 1R4W GSH 2.21239
9 4R1S NAP 2.37389
10 5HXI 5HN 2.54958
11 1N7G GDR 2.54958
12 2RI1 GLP 2.55319
13 3A06 NDP 2.83286
14 3A06 FOM 2.83286
15 5LQ8 GB 2.83688
16 2B5W NAP 3.11615
17 4RF2 NAP 3.30882
18 3JQG AX6 3.47222
19 3BMQ AX5 3.47222
20 3BMO AX4 3.47222
21 3JQ7 DX2 3.47222
22 4CM4 4NR 3.47222
23 3JQ8 DX3 3.47222
24 4CM9 YGL 3.47222
25 4R6W PC 3.48837
26 4R6W SAH 3.48837
27 3U4C NDP 3.55872
28 3JYN NDP 3.69231
29 1RPN NDP 3.8806
30 1ZK4 NAP 3.98406
31 1WMA AB3 3.98551
32 1WMA NDP 3.98551
33 4BVA T3 4.1791
34 4BVA NDP 4.1791
35 1QMG APX 4.24929
36 1V35 NAI 4.25532
37 2VSS ACO 4.34783
38 6G7N DAL 4.40252
39 5L53 NAP 4.62963
40 5KKA 6V0 4.80769
41 5JAQ NAI 4.81586
42 3AY6 BGC 4.83271
43 3AY6 NAI 4.83271
44 1GEE NAD 4.98084
45 4XDY NAI 5.02959
46 5L4S 6KX 5.03145
47 5L4S NAP 5.03145
48 5I7S E9P 5.07246
49 5I7S NAD 5.07246
50 2IVN ANP 5.15152
51 4OOE NDP 5.38244
52 4OOE FOM 5.38244
53 2X6T NAP 5.38244
54 1NPD NAD 5.55556
55 5H81 NAP 5.66572
56 5OOH NAP 6.31068
57 5OOH 9ZZ 6.31068
58 5AYV KPL 6.79612
59 4CJX NAP 6.89655
60 6A0S HSE 7.36544
61 6A0S NDP 7.36544
62 6B5K TYD 7.36544
63 4K26 NDP 7.6087
64 4K26 SFF 7.6087
65 1O5I NAD 8.43373
66 4EUE NAI 8.49858
67 1SAY PYR 8.58726
68 6F5Z SAH 9.52381
69 3O26 NDP 9.6463
70 1FWV SGA MAG FUC 9.70149
71 4KOA NDP 9.90991
72 2QES ADE 9.96169
73 3BAZ NAP 10.5105
74 5MSO NAP 11.3314
75 5WQP NAP 11.9658
76 5WQP NCA 11.9658
77 5NFB 8VT 13.0682
78 5ZI2 ADP 14.4928
79 5ZI2 NAD 14.4928
Pocket No.: 4; Query (leader) PDB : 3H5N; Ligand: ATP; Similar sites found with APoc: 49
This union binding pocket(no: 4) in the query (biounit: 3h5n.bio1) has 52 residues
No: Leader PDB Ligand Sequence Similarity
1 6BSW UDP 1.18343
2 2ZHL NAG GAL GAL NAG 1.35135
3 6EXF LYS 1.41643
4 2VWT PYR 1.87266
5 5HV7 RBL 2.26629
6 1JDC GLC GLC GLC GLC 2.26629
7 4USF 6UI 2.63158
8 1H5R THM 2.73038
9 3PGU OLA 2.83286
10 5O9W AKG 3.11615
11 2VL1 GLY GLY 3.39943
12 5XHA FRU 3.39943
13 5JSP DQY 3.48259
14 3JU6 ANP 3.68272
15 3M3E GAL A2G NPO 3.72671
16 4P7X YCP 3.76712
17 4P7X AKG 3.76712
18 6C0B MLI 3.84615
19 4ZU4 4TG 4.05405
20 4UHL VFV 4.24929
21 2D6M LBT 4.40252
22 5DG2 GAL GLC 4.44444
23 1A78 TDG 4.47761
24 1HBK MYR 4.49438
25 6BU0 IHP 4.58015
26 1AUA BOG 4.72973
27 4WOE ADP 4.81586
28 4QPW XYP XYP XYP 4.92958
29 3GD9 GLC BGC BGC BGC 5.09915
30 2QHV OC9 5.2381
31 5KJW 53C 5.38244
32 3ZJX BOG 5.53633
33 3AB4 THR 5.66572
34 1OPB RET 5.97015
35 1ERB ETR 6.01093
36 6FA4 D1W 6.35838
37 1QFT HSM 7.42857
38 3SAO NKN 7.5
39 1ULE GLA GAL NAG 8
40 2YKL NLD 8.01887
41 5TPV TYD 9.15033
42 5L3S G 9.73154
43 5NCF 8T5 9.73451
44 5MJA 7O3 10.4918
45 3WG3 A2G GAL NAG FUC 11.236
46 6GR0 F8W 11.4943
47 1SLT NDG GAL 11.9403
48 5VAD PRO 12.4646
49 4LOO SB4 13.7931
APoc FAQ
Feedback