Receptor
PDB id Resolution Class Description Source Keywords
3GL6 1.9 Å EC: 1.14.11.- CRYSTAL STRUCTURE OF JARID1A-PHD3 COMPLEXED WITH H3(1-9) K4ME3 PEPTIDE HOMO SAPIENS PHD FINGERH3(1-9)K4ME3 PEPTIDE LEUKEMIA ALTERNATIVE SPLICING CHROMATIN REGULATOR DEVELOPMENTAL PROTEIN DIOXYGENASE IRON METAL-BINDING NUCLEUS OXIDOREDUCTASE PHOSPHOPROTEIN POLYMORPHISM TRANSCRIPTION TRANSCRIPTION REGULATION ZINC ZINC-FINGER CHROMOSOMAL PROTEIN DNA- BINDING NUCLEOSOME CORE
Ref.: HAEMATOPOIETIC MALIGNANCIES CAUSED BY DYSREGULATION OF A CHROMATIN-BINDING PHD FINGER. NATURE V. 459 847 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ALA ARG THR M3L GLN THR ALA ARG LYS B:1;
Valid;
none;
Kd = 0.75 uM
675.853 n/a O=C(N...
ZN A:1;
A:2;
A:3;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3GL6 1.9 Å EC: 1.14.11.- CRYSTAL STRUCTURE OF JARID1A-PHD3 COMPLEXED WITH H3(1-9) K4ME3 PEPTIDE HOMO SAPIENS PHD FINGERH3(1-9)K4ME3 PEPTIDE LEUKEMIA ALTERNATIVE SPLICING CHROMATIN REGULATOR DEVELOPMENTAL PROTEIN DIOXYGENASE IRON METAL-BINDING NUCLEUS OXIDOREDUCTASE PHOSPHOPROTEIN POLYMORPHISM TRANSCRIPTION TRANSCRIPTION REGULATION ZINC ZINC-FINGER CHROMOSOMAL PROTEIN DNA- BINDING NUCLEOSOME CORE
Ref.: HAEMATOPOIETIC MALIGNANCIES CAUSED BY DYSREGULATION OF A CHROMATIN-BINDING PHD FINGER. NATURE V. 459 847 2009
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 43 families.
1 3GL6 Kd = 0.75 uM ALA ARG THR M3L GLN THR ALA ARG LYS n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 31 families.
1 3GL6 Kd = 0.75 uM ALA ARG THR M3L GLN THR ALA ARG LYS n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 28 families.
1 3GL6 Kd = 0.75 uM ALA ARG THR M3L GLN THR ALA ARG LYS n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: ALA ARG THR M3L GLN THR ALA ARG LYS; Similar ligands found: 66
No: Ligand ECFP6 Tc MDL keys Tc
1 ALA ARG THR M3L GLN THR ALA ARG LYS 1 1
2 ALA ARG THR M3L GLN THR ALA ARG LYS SER 0.78022 0.983607
3 ALA ARG THR M3L GLN THR ALA 2MR LYS 0.694737 0.983607
4 ALA ARG THR M3L GLN THR ALA ARG 0.67 0.967742
5 ALA ARG THR M3L GLN THR ALA ALA LYS ALA 0.64486 0.967742
6 ALA ARG THR ALA ALA THR ALA ARG LYS SER 0.630435 0.783333
7 ALA ARG THR MLY GLN THR ALA ARG LYS 0.623762 0.934426
8 ALA ARG THR MLZ GLN THR ALA ARG LYS TYR 0.623762 0.868852
9 ALA ALA LEU THR ARG ALA 0.597938 0.8
10 ALA DA2 THR M3L GLN THR ALA ARG ALA 0.594828 0.967742
11 ALA ARG M3L SER 0.586957 0.934426
12 ALA ARG THR LYS GLN THR ALA ARG LYS 0.584906 0.803279
13 GLN THR ALA ARG M3L SER 0.568807 0.967742
14 ALA ARG THR MLZ GLN THR ALA ARG LYS 0.563636 0.885246
15 ALA ARG THR ALY GLN THR ALA 0.563107 0.836066
16 ALA ARG THR LYS GLN THR ALA ARG 0.56 0.786885
17 ALA ARG THR M3L GLN THR ALA DA2 LYS 0.56 0.983607
18 ALA ARG THR MLY GLN THR ALA ARG LYS TYR 0.552381 0.95082
19 ALA ARG 9AT 0.547619 0.766667
20 ALA ARG THR MLY GLN THR ALA ARG MLY SER 0.543689 0.934426
21 ALA ARG THR MLY GLN THR ALA ARG LYS SER 0.535354 0.741935
22 GLN THR ALA ARG M3L SER THR GLY 0.534483 0.967742
23 ALA ARG ALA ALA ALA ALA ALA ALA ALA 0.534091 0.672131
24 LYS GLN THR ALA ARG M3L SER THR GLY 0.53211 0.967742
25 ALA GLN THR ALA ARG ALY SER THR 0.530973 0.822581
26 ALA ARG THR MLY GLN 0.519231 0.919355
27 LYS ALA ALA ARG M3L SER ALA 0.509091 0.967213
28 ARG ARG ARG GLU THR GLN VAL 0.504854 0.790323
29 ARG ARG ALA THR LYS MET NH2 0.495495 0.868852
30 ACE ALA ARG THR LYS GLN 0.495146 0.8
31 ALA ARG THR LYS GLN THR ALA ARG LYS SER 0.479167 0.7
32 ALA ARG M3L SER THR GLY GLY ALY 0.47541 0.9375
33 ACE GLU ALA GLN THR ARG LEU 0.469027 0.790323
34 GLU ALA GLN THR ARG LEU 0.464912 0.774194
35 GLN ARG ALA THR LYS MET NH2 0.461538 0.83871
36 ALA THR ALY ALA ALA ARG ALY SER ALA PRO 0.460317 0.771429
37 ALA MET ARG VAL 0.459184 0.737705
38 ACE GLN THR ALA ARG PRK SER THR 0.457627 0.765625
39 ARG ARG ALA ALA 0.457447 0.688525
40 LYS ALA ARG VAL LEU ALA GLU ALA MET SER 0.454545 0.730159
41 ACE GLN THR ALA ARG BTK SER THR 0.452991 0.793651
42 ALA ILE ARG SER 0.45 0.709677
43 ALA 2MR THR MLY GLN THR ALA ALA 0.45 0.935484
44 ALA THR PRK ALA ALA ARG LYS SER 0.444444 0.68254
45 ACE GLN THR ALA ARG KCR SER THR 0.442623 0.777778
46 THR ARG ARG GLU THR GLN LEU 0.441441 0.806452
47 THR ALA ARG M3L SER THR 0.44 0.934426
48 ARG LEU GLN ARG ARG ARG GLU THR GLN VAL 0.439655 0.806452
49 PHE ALA GLY LEU ARG GLN ALA VAL THR GLN 0.435897 0.761905
50 THR ALA ARG M3L SER THR GLY GLY LYS ALA 0.432432 0.854839
51 HIS GLY ALA ALA ARG ALA GLU VAL HIS LEU 0.429825 0.693548
52 ALA ARG THR GLU LEU TYR ARG SER LEU 0.426357 0.724638
53 GLU ARG THR ILE PRO ILE THR ARG GLU 0.424 0.757143
54 ACE CSO ARG ALA THR LYS MET LEU 0.420635 0.797101
55 ARG GLY PHE ALA LEU M3L SER THR HIS GLY 0.42 0.810811
56 ALA ARG TPO LYS 0.416667 0.742424
57 ALA MET ALA PRO ARG THR LEU LEU LEU 0.409091 0.802817
58 ALA ARG THR MLY GLN THR ALA ARG TYR 0.407692 0.852941
59 THR ALA ARG MYK SER THR GLY 0.40625 0.8125
60 ALA ARG LYS SEP THR GLY GLY LYS 0.40625 0.75
61 ACE ALA ARG THR GLU VAL TYR NH2 0.403226 0.691176
62 ALA THR ARG ASN PHE SER GLY 0.403226 0.701493
63 MET ABA LEU ARG MET THR ALA VAL MET 0.401575 0.825397
64 ASN ARG LEU LEU LEU THR GLY 0.4 0.777778
65 ALA GLN ASP ILE TYR ARG ALA SER TYR 0.4 0.666667
66 VAL ALA ARG SER 0.4 0.709677
Similar Ligands (3D)
Ligand no: 1; Ligand: ALA ARG THR M3L GLN THR ALA ARG LYS; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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