Receptor
PDB id Resolution Class Description Source Keywords
3G89 1.5 Å EC: 2.1.1.- T. THERMOPHILUS 16S RRNA G527 METHYLTRANSFERASE IN COMPLEX WITH ADOMET AND AMP IN SPACE GROUP P61 THERMUS THERMOPHILUS METHYLTRANSFERASE 16S RRNA METHYLTRANSFERASE TRANSLATION CYTOPLASM RRNA PROCESSING S-ADENOSYL-L-METHIONINE TRANSFERASE
Ref.: STRUCTURAL AND FUNCTIONAL STUDIES OF THE THERMUS THERMOPHILUS 16S RRNA METHYLTRANSFERASE RSMG RNA V. 15 1693 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
AMP A:304;
B:304;
Valid;
Valid;
none;
none;
submit data
347.221 C10 H14 N5 O7 P c1nc(...
SAM A:303;
B:303;
Valid;
Valid;
none;
none;
submit data
398.437 C15 H22 N6 O5 S C[S@@...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3G89 1.5 Å EC: 2.1.1.- T. THERMOPHILUS 16S RRNA G527 METHYLTRANSFERASE IN COMPLEX WITH ADOMET AND AMP IN SPACE GROUP P61 THERMUS THERMOPHILUS METHYLTRANSFERASE 16S RRNA METHYLTRANSFERASE TRANSLATION CYTOPLASM RRNA PROCESSING S-ADENOSYL-L-METHIONINE TRANSFERASE
Ref.: STRUCTURAL AND FUNCTIONAL STUDIES OF THE THERMUS THERMOPHILUS 16S RRNA METHYLTRANSFERASE RSMG RNA V. 15 1693 2009
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 57 families.
1 3G8B - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 3G88 - SAM C15 H22 N6 O5 S C[S@@+](CC....
3 3G8A - SAH C14 H20 N6 O5 S c1nc(c2c(n....
4 3G89 - SAM C15 H22 N6 O5 S C[S@@+](CC....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 50 families.
1 3G8B - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 3G88 - SAM C15 H22 N6 O5 S C[S@@+](CC....
3 3G8A - SAH C14 H20 N6 O5 S c1nc(c2c(n....
4 3G89 - SAM C15 H22 N6 O5 S C[S@@+](CC....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 44 families.
1 3G8B - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 3G88 - SAM C15 H22 N6 O5 S C[S@@+](CC....
3 3G8A - SAH C14 H20 N6 O5 S c1nc(c2c(n....
4 3G89 - SAM C15 H22 N6 O5 S C[S@@+](CC....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: AMP; Similar ligands found: 382
No: Ligand ECFP6 Tc MDL keys Tc
1 AMP 1 1
2 A 1 1
3 A2D 0.833333 0.943662
4 ABM 0.833333 0.943662
5 ADP 0.823529 0.971429
6 AMP MG 0.818182 0.916667
7 A12 0.808824 0.931507
8 AP2 0.808824 0.931507
9 BA3 0.808824 0.943662
10 SRA 0.80303 0.944444
11 AP5 0.797101 0.943662
12 B4P 0.797101 0.943662
13 ATP 0.788732 0.971429
14 AN2 0.785714 0.957747
15 APC 0.777778 0.931507
16 AQP 0.777778 0.971429
17 5FA 0.777778 0.971429
18 ADX 0.774648 0.848101
19 CA0 0.774648 0.917808
20 M33 0.774648 0.930556
21 AU1 0.774648 0.944444
22 ACP 0.763889 0.944444
23 50T 0.763889 0.957747
24 25A 0.75641 0.971429
25 AR6 0.753425 0.943662
26 APR 0.753425 0.943662
27 PRX 0.753425 0.917808
28 ADP MG 0.75 0.90411
29 TAT 0.746667 0.931507
30 ACQ 0.746667 0.944444
31 RBY 0.743243 0.905405
32 SAP 0.743243 0.918919
33 AGS 0.743243 0.918919
34 ADV 0.743243 0.905405
35 AD9 0.743243 0.944444
36 BEF ADP 0.739726 0.88
37 ADP BEF 0.739726 0.88
38 ANP 0.723684 0.944444
39 ADP PO3 0.72 0.942857
40 5AL 0.714286 0.930556
41 SON 0.712329 0.931507
42 ATP MG 0.710526 0.90411
43 ADN 0.709677 0.842857
44 XYA 0.709677 0.842857
45 RAB 0.709677 0.842857
46 ATF 0.705128 0.931507
47 GAP 0.701299 0.891892
48 A22 0.7 0.957747
49 SRP 0.696203 0.905405
50 7D5 0.691176 0.902778
51 A3P 0.684932 0.971014
52 A2P 0.684932 0.956522
53 ALF ADP 0.683544 0.868421
54 ADP ALF 0.683544 0.868421
55 ADQ 0.682927 0.917808
56 MAP 0.679012 0.918919
57 ANP MG 0.675 0.893333
58 ADP VO4 0.675 0.930556
59 VO4 ADP 0.675 0.930556
60 5SV 0.670732 0.87013
61 OOB 0.670732 0.930556
62 8QN 0.670732 0.930556
63 PTJ 0.670588 0.894737
64 AOC 0.666667 0.84507
65 4AD 0.662651 0.893333
66 A1R 0.662651 0.881579
67 AMO 0.662651 0.905405
68 PAJ 0.662651 0.858974
69 5N5 0.661538 0.816901
70 DAL AMP 0.658537 0.90411
71 IMO 0.657534 0.928571
72 DLL 0.654762 0.930556
73 AHX 0.654762 0.87013
74 00A 0.654762 0.881579
75 5AS 0.653333 0.776471
76 5CD 0.651515 0.828571
77 A4D 0.651515 0.816901
78 3UK 0.647059 0.917808
79 ADP BMA 0.647059 0.891892
80 OAD 0.647059 0.917808
81 25L 0.643678 0.957747
82 PR8 0.639535 0.848101
83 WAQ 0.639535 0.881579
84 LAD 0.639535 0.858974
85 DTA 0.637681 0.808219
86 V3L 0.6375 0.971429
87 3DH 0.633803 0.794521
88 BIS 0.632184 0.906667
89 TXA 0.632184 0.905405
90 FYA 0.632184 0.930556
91 ME8 0.632184 0.8375
92 1ZZ 0.632184 0.8375
93 3OD 0.632184 0.917808
94 NB8 0.632184 0.87013
95 MTA 0.628571 0.794521
96 3AM 0.625 0.956522
97 EP4 0.623188 0.773333
98 A A 0.62069 0.971429
99 9SN 0.617977 0.87013
100 M2T 0.614286 0.753247
101 JB6 0.613636 0.881579
102 YAP 0.611111 0.893333
103 FA5 0.611111 0.905405
104 MYR AMP 0.606742 0.814815
105 G5A 0.604938 0.776471
106 XAH 0.604396 0.8375
107 4UV 0.597826 0.893333
108 71V 0.597403 0.906667
109 ATP A A A 0.593407 0.929577
110 PAP 0.592593 0.957143
111 G3A 0.591398 0.894737
112 2AM 0.589041 0.942857
113 5X8 0.5875 0.783784
114 TYR AMP 0.586957 0.88
115 6RE 0.586667 0.779221
116 6C6 0.585366 0.905405
117 4UU 0.585106 0.893333
118 G5P 0.585106 0.894737
119 AFH 0.585106 0.858974
120 7D3 0.584416 0.878378
121 A5A 0.583333 0.804878
122 TSB 0.581395 0.795181
123 AMP DBH 0.580645 0.891892
124 2A5 0.580247 0.891892
125 DSH 0.578947 0.74359
126 TAD 0.578947 0.858974
127 GTA 0.578947 0.860759
128 6IA 0.578313 0.858974
129 SSA 0.576471 0.776471
130 C2R 0.575342 0.876712
131 AMZ 0.575342 0.888889
132 7D4 0.575 0.878378
133 PGS 0.575 0.857143
134 ZAS 0.573333 0.786667
135 ATR 0.573171 0.942857
136 LAQ 0.572917 0.8375
137 PPS 0.571429 0.848101
138 AAM 0.571429 1
139 AIR 0.571429 0.927536
140 J7C 0.571429 0.789474
141 A3N 0.571429 0.783784
142 54H 0.569767 0.785714
143 VMS 0.569767 0.785714
144 52H 0.569767 0.776471
145 7MD 0.568421 0.8375
146 AR6 AR6 0.568421 0.916667
147 48N 0.56701 0.87013
148 YLP 0.56701 0.817073
149 OVE 0.565789 0.90411
150 UPA 0.565657 0.881579
151 2SA 0.564706 0.905405
152 S4M 0.564103 0.682353
153 53H 0.563218 0.776471
154 5CA 0.563218 0.776471
155 4UW 0.561224 0.858974
156 NAI 0.561224 0.881579
157 TXD 0.561224 0.881579
158 6V0 0.561224 0.87013
159 UP5 0.561224 0.893333
160 DND 0.561224 0.905405
161 NXX 0.561224 0.905405
162 NAX 0.561224 0.848101
163 NIA 0.56 0.820513
164 D5M 0.558442 0.902778
165 DA 0.558442 0.902778
166 MAO 0.556962 0.777778
167 AHZ 0.556701 0.814815
168 ARG AMP 0.556701 0.82716
169 ITT 0.555556 0.915493
170 TXE 0.555556 0.881579
171 TYM 0.555556 0.905405
172 OMR 0.555556 0.82716
173 5AD 0.552239 0.768116
174 A2R 0.551724 0.957747
175 LPA AMP 0.55102 0.814815
176 DSZ 0.550562 0.776471
177 LSS 0.550562 0.758621
178 NSS 0.550562 0.776471
179 YLB 0.55 0.817073
180 YLC 0.55 0.8375
181 4TC 0.55 0.87013
182 AP0 0.55 0.87013
183 P5A 0.549451 0.741573
184 139 0.54902 0.848101
185 A4P 0.544554 0.819277
186 NVA LMS 0.544444 0.758621
187 GJV 0.544304 0.769231
188 7D7 0.544118 0.763889
189 A7D 0.54321 0.797297
190 ALF ADP 3PG 0.54 0.835443
191 LA8 ALF 3PG 0.54 0.835443
192 AF3 ADP 3PG 0.54 0.835443
193 6K6 0.539326 0.957143
194 IOT 0.539216 0.829268
195 LEU LMS 0.538462 0.758621
196 A3G 0.538462 0.797297
197 A5D 0.535714 0.808219
198 7MC 0.534653 0.817073
199 T5A 0.533981 0.817073
200 YLA 0.533981 0.817073
201 ADJ 0.533981 0.82716
202 KAA 0.532609 0.75
203 GSU 0.532609 0.776471
204 7RA 0.531646 0.985507
205 SFG 0.53012 0.77027
206 SAH 0.529412 0.763158
207 AYB 0.528846 0.807229
208 CNA 0.528846 0.905405
209 N6P 0.527473 0.942029
210 8BR 0.525 0.931507
211 Y3J 0.521127 0.746479
212 YSA 0.520833 0.776471
213 7RP 0.518987 0.955882
214 G A A A 0.518868 0.87013
215 COD 0.518868 0.788235
216 BTX 0.518868 0.839506
217 NAD 0.518868 0.930556
218 MHZ 0.518072 0.714286
219 SA8 0.517647 0.725
220 6AD 0.517241 0.883117
221 DZD 0.514019 0.858974
222 BT5 0.514019 0.829268
223 RMB 0.5125 0.898551
224 SAI 0.511628 0.753247
225 AV2 0.511364 0.890411
226 NAD IBO 0.509434 0.868421
227 A3D 0.509259 0.917808
228 A3S 0.506024 0.808219
229 SAM 0.505747 0.707317
230 3AT 0.505747 0.943662
231 SMM 0.505618 0.702381
232 NA7 0.505376 0.931507
233 4TA 0.504673 0.804878
234 5GP 0.5 0.905405
235 EEM 0.5 0.707317
236 NEC 0.5 0.743243
237 AAT 0.5 0.725
238 G 0.5 0.905405
239 YLY 0.495495 0.807229
240 M24 0.495495 0.848101
241 7C5 0.494949 0.815789
242 DAT 0.494118 0.878378
243 A3T 0.494118 0.819444
244 FAI 0.493827 0.888889
245 P2P 0.493827 0.928571
246 1RB 0.493671 0.911765
247 NAE 0.491071 0.893333
248 NAJ PZO 0.490909 0.846154
249 TM1 0.489583 0.771084
250 A6D 0.489362 0.740741
251 PO4 PO4 A A A A PO4 0.489362 0.901408
252 A A A 0.489362 0.90411
253 S7M 0.488889 0.707317
254 DTP 0.488636 0.878378
255 101 0.4875 0.902778
256 RBZ 0.4875 0.873239
257 EAD 0.486957 0.848101
258 NAQ 0.486726 0.87013
259 U A G G 0.486239 0.881579
260 4YB 0.485149 0.758621
261 NDE 0.483051 0.931507
262 N0B 0.482456 0.817073
263 ZID 0.482456 0.917808
264 WSA 0.480769 0.785714
265 RGT 0.479592 0.931507
266 ARU 0.478723 0.835443
267 GGZ 0.478261 0.8
268 JLN 0.47561 0.863014
269 ANZ 0.475248 0.820513
270 ACK 0.475 0.885714
271 QQY 0.475 0.837838
272 NAJ PYZ 0.473684 0.848101
273 S8M 0.473118 0.779221
274 GEK 0.473118 0.734177
275 AVV 0.473118 0.87013
276 3AD 0.472973 0.828571
277 A U 0.471698 0.868421
278 P1H 0.470588 0.82716
279 AMP NAD 0.469565 0.88
280 0UM 0.468085 0.716049
281 RVP 0.467532 0.847222
282 649 0.466667 0.741573
283 Z5A 0.465517 0.776471
284 PMO 0.464286 0.873239
285 SXZ 0.463918 0.707317
286 62X 0.463158 0.682353
287 QQX 0.4625 0.826667
288 2VA 0.45977 0.797297
289 IMP 0.458824 0.90411
290 K15 0.458333 0.698795
291 CC5 0.458333 0.84058
292 AS 0.457831 0.855263
293 DDS 0.455556 0.851351
294 V1N 0.455446 0.943662
295 NJP 0.454545 0.918919
296 93A 0.453488 0.804878
297 G7M 0.453488 0.87013
298 7DD 0.453488 0.957143
299 3D1 0.453333 0.77027
300 3L1 0.453333 0.77027
301 NDC 0.45082 0.87013
302 FB0 0.45082 0.781609
303 0WD 0.45045 0.894737
304 26A 0.447368 0.76
305 2FA 0.447368 0.810811
306 CMP 0.447059 0.927536
307 2BA 0.447059 0.914286
308 D3Y 0.446809 0.786667
309 SO8 0.444444 0.786667
310 APU 0.444444 0.893333
311 VRT 0.444444 0.766234
312 KB1 0.444444 0.716049
313 FDA 0.443548 0.809524
314 PUA 0.443478 0.858974
315 ODP 0.441441 0.883117
316 6FA 0.44 0.817073
317 RP1 0.439024 0.864865
318 SP1 0.439024 0.864865
319 103 0.439024 0.861111
320 3NZ 0.438776 0.779221
321 7DT 0.438202 0.957143
322 U G A 0.436508 0.8375
323 NDP 0.436364 0.894737
324 NPW 0.436364 0.860759
325 MTP 0.434211 0.727273
326 NVA 2AD 0.433333 0.74026
327 FAD 0.433071 0.82716
328 SFD 0.433071 0.712766
329 FAS 0.433071 0.82716
330 TXP 0.432432 0.894737
331 IRN 0.432432 0.867647
332 NZQ 0.432432 0.883117
333 ZZB 0.432432 0.792683
334 FNK 0.430769 0.781609
335 62F 0.430769 0.8375
336 128 0.429907 0.752941
337 PLP AAD 0.429825 0.758621
338 PAX 0.428571 0.82716
339 6MD 0.428571 0.805556
340 1DA 0.428571 0.842857
341 SLU 0.426087 0.767442
342 XNP 0.424779 0.848101
343 12D 0.424528 0.761905
344 5F1 0.423077 0.72973
345 ETB 0.422414 0.809524
346 DCA 0.422414 0.8
347 WMP 0.421053 0.864865
348 GUO 0.421053 0.864865
349 FAY 0.416667 0.8375
350 38Y 0.415929 0.804878
351 5J9 0.415842 0.728395
352 NAD BBN 0.415385 0.817073
353 0T1 0.415254 0.8
354 COA 0.415254 0.8
355 KH3 0.415094 0.690476
356 FMP 0.413793 0.871429
357 U A C C 0.413793 0.857143
358 N01 0.413793 0.90411
359 RFL 0.413534 0.797619
360 NMN AMP PO4 0.412281 0.868421
361 NAD CJ3 0.409091 0.788235
362 GDP 0.408602 0.893333
363 GP2 0.408602 0.858974
364 NAP 0.408333 0.944444
365 NOC 0.407895 0.760563
366 CNV FAD 0.407407 0.770115
367 2ER 0.405941 0.831169
368 1PR 0.405941 0.820513
369 P5F 0.405797 0.8
370 TAP 0.404959 0.906667
371 CAO 0.404959 0.772727
372 AMX 0.404959 0.809524
373 COS 0.404959 0.781609
374 30N 0.404959 0.731183
375 XMP 0.402299 0.891892
376 G2P 0.402062 0.858974
377 APC G U 0.401709 0.833333
378 U A A U 0.401639 0.906667
379 CMX 0.401639 0.8
380 SCO 0.401639 0.8
381 NA0 0.401639 0.931507
382 F2N 0.4 0.790698
Ligand no: 2; Ligand: SAM; Similar ligands found: 192
No: Ligand ECFP6 Tc MDL keys Tc
1 SAM 1 1
2 SMM 0.792683 0.96
3 S4M 0.6875 0.909091
4 S7M 0.670455 0.945946
5 M2T 0.636364 0.878378
6 GEK 0.612903 0.931507
7 SAI 0.571429 0.878378
8 XYA 0.565789 0.773333
9 ADN 0.565789 0.773333
10 RAB 0.565789 0.773333
11 5CD 0.564103 0.783784
12 EP4 0.5625 0.826667
13 SA8 0.56044 0.945205
14 SFG 0.555556 0.875
15 5X8 0.555556 0.888889
16 5N5 0.551282 0.773333
17 A4D 0.544304 0.797297
18 EEM 0.542553 0.945946
19 SAH 0.537634 0.916667
20 DTA 0.536585 0.789474
21 62X 0.535354 0.884615
22 MTA 0.53012 0.875
23 3DH 0.517647 0.849315
24 AMP MG 0.511364 0.710843
25 5AL 0.510417 0.743902
26 VMS 0.510204 0.673913
27 54H 0.510204 0.673913
28 0UM 0.51 0.857143
29 A 0.505747 0.707317
30 AMP 0.505747 0.707317
31 ABM 0.505618 0.753086
32 A5A 0.505155 0.688889
33 DAL AMP 0.50505 0.765432
34 NVA LMS 0.504951 0.725275
35 K15 0.5 0.883117
36 6RE 0.5 0.78481
37 5AD 0.5 0.75
38 SSA 0.5 0.684783
39 SON 0.5 0.746988
40 SRP 0.5 0.746988
41 LSS 0.49505 0.706522
42 CA0 0.494624 0.714286
43 A12 0.494505 0.705882
44 AP2 0.494505 0.705882
45 ME8 0.490385 0.841463
46 5CA 0.49 0.684783
47 TSB 0.49 0.681319
48 53H 0.49 0.666667
49 ACP 0.489362 0.694118
50 5AS 0.48913 0.648936
51 ADP 0.48913 0.690476
52 A2D 0.488889 0.690476
53 J7C 0.488889 0.772152
54 ZAS 0.488636 0.769231
55 8QN 0.485149 0.743902
56 GAP 0.484536 0.73494
57 AN2 0.483871 0.682353
58 A3S 0.483871 0.813333
59 A7D 0.483871 0.851351
60 GJV 0.483516 0.775
61 SRA 0.483146 0.694118
62 LAD 0.480769 0.752941
63 KAA 0.480769 0.698925
64 GSU 0.480769 0.722222
65 AMO 0.480392 0.746988
66 DSZ 0.480392 0.703297
67 52H 0.48 0.666667
68 ADP MG 0.478723 0.702381
69 M33 0.478723 0.722892
70 MAO 0.478261 0.82716
71 BA3 0.478261 0.690476
72 AOC 0.477778 0.776316
73 DSH 0.477778 0.842105
74 NEC 0.477778 0.75
75 SXZ 0.47619 0.894737
76 AHX 0.475728 0.701149
77 Y3J 0.47561 0.706667
78 G5A 0.474227 0.684783
79 A3T 0.473684 0.8
80 ADP BEF 0.473684 0.686047
81 BEF ADP 0.473684 0.686047
82 B4P 0.473118 0.690476
83 AP5 0.473118 0.690476
84 A3N 0.472527 0.766234
85 KB1 0.471698 0.833333
86 LEU LMS 0.471154 0.706522
87 APC 0.46875 0.705882
88 PRX 0.46875 0.73494
89 PAJ 0.466019 0.712644
90 4AD 0.466019 0.759036
91 RBY 0.463918 0.72619
92 ADP PO3 0.463918 0.728395
93 ADV 0.463918 0.72619
94 ADX 0.463158 0.666667
95 MHZ 0.463158 0.82716
96 AU1 0.463158 0.674419
97 YAP 0.462963 0.738095
98 TXA 0.462264 0.72619
99 NB8 0.462264 0.72093
100 A3G 0.461538 0.802632
101 VRT 0.459184 0.842105
102 ATP MG 0.459184 0.702381
103 YSA 0.458716 0.684783
104 XAH 0.458716 0.715909
105 50T 0.458333 0.682353
106 ATP 0.458333 0.690476
107 7D7 0.45679 0.723684
108 ANP MG 0.455446 0.678161
109 KH3 0.455357 0.871795
110 ACQ 0.454545 0.694118
111 AQP 0.453608 0.690476
112 5FA 0.453608 0.690476
113 AR6 0.453608 0.710843
114 APR 0.453608 0.710843
115 NSS 0.451923 0.703297
116 FA5 0.449541 0.746988
117 AGS 0.44898 0.678161
118 SAP 0.44898 0.678161
119 A5D 0.44898 0.789474
120 AD9 0.44898 0.674419
121 PTJ 0.448598 0.72093
122 YLB 0.448276 0.758621
123 YLP 0.447368 0.738636
124 D3Y 0.446602 0.792208
125 ADP ALF 0.445545 0.678161
126 ALF ADP 0.445545 0.678161
127 TYR AMP 0.445455 0.746988
128 MYR AMP 0.444444 0.776471
129 3AM 0.444444 0.674699
130 OAD 0.443396 0.73494
131 2VA 0.443299 0.779221
132 OOB 0.442308 0.722892
133 S8M 0.442308 0.831169
134 ADP VO4 0.441176 0.702381
135 VO4 ADP 0.441176 0.702381
136 ANP 0.44 0.674419
137 TAT 0.44 0.686047
138 WAQ 0.439252 0.75
139 ARG AMP 0.438596 0.727273
140 YLC 0.435897 0.755814
141 AAT 0.435644 0.797468
142 3OD 0.435185 0.73494
143 1ZZ 0.435185 0.755814
144 NVA 2AD 0.434343 0.815789
145 DLL 0.433962 0.722892
146 00A 0.433962 0.689655
147 7MD 0.433628 0.715909
148 ATF 0.431373 0.666667
149 SO8 0.43 0.792208
150 3UK 0.429907 0.714286
151 A6D 0.429907 0.72619
152 5SV 0.428571 0.741176
153 AMP DBH 0.428571 0.714286
154 WSA 0.42735 0.692308
155 TYM 0.42735 0.746988
156 9SN 0.427273 0.681818
157 AHZ 0.426087 0.755814
158 A A 0.425926 0.710843
159 3NZ 0.425926 0.807692
160 P5A 0.425926 0.691489
161 PR8 0.425926 0.744186
162 A1R 0.424528 0.709302
163 2A5 0.424242 0.674419
164 7MC 0.423729 0.719101
165 7D5 0.422222 0.658824
166 FYA 0.422018 0.722892
167 JB6 0.422018 0.709302
168 AYB 0.421488 0.75
169 PLP AAD 0.419355 0.764045
170 A22 0.419048 0.682353
171 MAP 0.419048 0.659091
172 2AM 0.417582 0.666667
173 TAD 0.417391 0.712644
174 A3P 0.416667 0.686747
175 ADP BMA 0.416667 0.714286
176 25A 0.415094 0.690476
177 YLA 0.413223 0.719101
178 ADQ 0.411215 0.694118
179 48N 0.410256 0.72093
180 0XU 0.41 0.824324
181 NAD IBO 0.406504 0.717647
182 7D3 0.40625 0.643678
183 PAP 0.405941 0.678571
184 OVE 0.404255 0.662791
185 4UV 0.403509 0.697674
186 ALF ADP 3PG 0.403361 0.712644
187 AF3 ADP 3PG 0.403361 0.712644
188 LA8 ALF 3PG 0.403361 0.712644
189 3AD 0.402299 0.783784
190 CMP 0.402062 0.691358
191 2BA 0.402062 0.682927
192 7C5 0.4 0.731707
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3G89; Ligand: AMP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 3g89.bio1) has 4 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 3G89; Ligand: SAM; Similar sites found: 657
This union binding pocket(no: 2) in the query (biounit: 3g89.bio1) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2HMT NAI 0.00007534 0.50831 None
2 3C3Y SAH 0.006276 0.4151 None
3 3QXV MTX 0.01082 0.40042 None
4 3MB5 SAM 0.00003158 0.52812 1.20482
5 2PT9 2MH 0.0004956 0.48776 1.20482
6 2I7C AAT 0.0004892 0.48668 1.20482
7 2PT9 S4M 0.0002895 0.48668 1.20482
8 1BXK NAD 0.0008267 0.46989 1.20482
9 3AFN NAP 0.006382 0.43232 1.20482
10 1YB5 NAP 0.01617 0.41367 1.20482
11 2GN3 MMA 0.01486 0.40363 1.20482
12 1XHC FAD 0.00009986 0.52455 1.60643
13 5KVA SAM 0.0001559 0.49357 1.60643
14 2PZM UDP 0.001066 0.48176 1.60643
15 2PZM NAD 0.001066 0.48176 1.60643
16 3WLE NAD 0.003494 0.44862 1.60643
17 3H9E NAD 0.007258 0.42183 1.60643
18 1X7D ORN 0.01408 0.41978 1.60643
19 1X7D NAD 0.01004 0.4178 1.60643
20 2HNK SAH 0.0003411 0.47567 1.67364
21 1VM6 NAD 0.002522 0.44216 1.75439
22 3LCV SAM 0.00003123 0.52835 2.00803
23 3ICS FAD 0.000323 0.50201 2.00803
24 3ICR FAD 0.0003939 0.49652 2.00803
25 3ICT FAD 0.0004723 0.49263 2.00803
26 1NJR XYL 0.0004262 0.4821 2.00803
27 1BC5 SAH 0.0003564 0.47875 2.00803
28 1DLJ NAI 0.001816 0.47571 2.00803
29 2X3N FAD 0.0034 0.45033 2.00803
30 1LTH NAD 0.002386 0.44636 2.00803
31 3O03 NAP 0.002379 0.44491 2.00803
32 1OMO NAD 0.002589 0.44001 2.00803
33 1DLJ UGA 0.009385 0.43932 2.00803
34 1HYH NAD 0.004133 0.43902 2.00803
35 3RKR NAP 0.001621 0.42461 2.00803
36 3ICT ADP 0.001968 0.42434 2.00803
37 1PL6 NAD 0.004483 0.4237 2.00803
38 1PL6 572 0.01006 0.4215 2.00803
39 2C5A NAD 0.02656 0.41828 2.00803
40 3ICS ADP 0.002995 0.41662 2.00803
41 1PVN MZP 0.02059 0.41349 2.00803
42 2VYN NAD 0.02051 0.40281 2.00803
43 2HK9 NAP 0.01919 0.40163 2.00803
44 5L4L NAP 0.0168 0.40159 2.00803
45 2VT3 ATP 0.0005493 0.44798 2.32558
46 3L9W AMP 0.00001018 0.56511 2.40964
47 3L9W GSH 0.00001716 0.55059 2.40964
48 1UWK URO 0.0001216 0.53129 2.40964
49 1UWK NAD 0.0001216 0.53129 2.40964
50 1X87 NAD 0.00007578 0.51029 2.40964
51 3LZW FAD 0.0002808 0.50501 2.40964
52 3LZW NAP 0.0006341 0.50501 2.40964
53 1RP0 AHZ 0.0002003 0.50409 2.40964
54 1V5F FAD 0.00211 0.48166 2.40964
55 3NTD FAD 0.0009316 0.47925 2.40964
56 1G0N NDP 0.001568 0.46806 2.40964
57 1OBB NAD 0.000774 0.46474 2.40964
58 1G0N PHH 0.002172 0.46424 2.40964
59 3NT6 FAD 0.002155 0.46122 2.40964
60 5O4J PJL 0.001808 0.45904 2.40964
61 5O4J 9KH 0.001956 0.45862 2.40964
62 5O4J SAH 0.001956 0.45862 2.40964
63 1UXG NAD 0.004765 0.44415 2.40964
64 1WVG APR 0.004477 0.43034 2.40964
65 1H9A NAP 0.008966 0.42625 2.40964
66 1CDO NAD 0.006087 0.42547 2.40964
67 1DSS NAD 0.009518 0.41478 2.40964
68 4KP7 NAP 0.03823 0.40649 2.40964
69 2WOX NDP 0.02271 0.40639 2.40964
70 2PV7 NAD 0.01645 0.40617 2.40964
71 4KP7 1UQ 0.03434 0.40576 2.40964
72 2DKN NAI 0.01834 0.40517 2.40964
73 1DXY NAD 0.01678 0.40442 2.40964
74 2B4Q NAP 0.02132 0.40322 2.40964
75 5JE0 SAH 0.0000007871 0.45158 2.42915
76 5JE0 AZ8 0.0000007871 0.45158 2.42915
77 2FR1 NDP 0.002034 0.45525 2.6749
78 2Q1W NAD 0.001345 0.46396 2.7027
79 2V6G NAP 0.001065 0.46751 2.74725
80 2ZFU SAH 0.000001528 0.58471 2.7907
81 1F3L SAH 0.0000002556 0.62354 2.81124
82 1KPH SAH 0.0000003049 0.61997 2.81124
83 5DNK SAH 0.0000001114 0.59337 2.81124
84 1XTP SAI 0.0000008852 0.59002 2.81124
85 5MW4 5JU 0.000006574 0.58854 2.81124
86 3QOX SAH 0.000006381 0.56069 2.81124
87 5THZ SAH 0.000006456 0.56045 2.81124
88 5KOK SAH 0.0000004966 0.53813 2.81124
89 3P9C SAH 0.0000501 0.53328 2.81124
90 1GET FAD 0.0002362 0.53279 2.81124
91 1GET NAP 0.0002522 0.53279 2.81124
92 1KPG SAH 0.0000003107 0.52785 2.81124
93 1U2Z SAH 0.00003253 0.52751 2.81124
94 2Q0L FAD 0.0001308 0.52514 2.81124
95 2Q7V FAD 0.0003834 0.50184 2.81124
96 1V59 NAD 0.00004107 0.49837 2.81124
97 1REO FAD 0.0004057 0.49831 2.81124
98 2NVK FAD 0.000508 0.49574 2.81124
99 5THY SAH 0.000004603 0.49467 2.81124
100 5JCA FAD 0.0006286 0.49221 2.81124
101 5JCA NDP 0.001281 0.49151 2.81124
102 1H82 FAD 0.001156 0.49074 2.81124
103 1H82 GZZ 0.001387 0.48971 2.81124
104 1V59 FAD 0.0008534 0.48862 2.81124
105 1R6D NAD 0.002039 0.47566 2.81124
106 1R6D DAU 0.001965 0.47566 2.81124
107 3H8V ATP 0.0003221 0.47248 2.81124
108 2WA2 SAM 0.0003052 0.47121 2.81124
109 1R37 NAD 0.001252 0.46809 2.81124
110 4NTC FAD 0.002004 0.46599 2.81124
111 5L95 AMP 0.00005554 0.46224 2.81124
112 1S7G APR 0.001926 0.45769 2.81124
113 3F8D FAD 0.007254 0.45734 2.81124
114 1S7G NAD 0.00216 0.45266 2.81124
115 3ITJ FAD 0.00902 0.4394 2.81124
116 3TN7 NJP 0.00449 0.43728 2.81124
117 1D1T NAD 0.005599 0.43389 2.81124
118 3CIF G3H 0.01129 0.42244 2.81124
119 3CIF NAD 0.008264 0.42187 2.81124
120 3V1U NAD 0.00772 0.4191 2.81124
121 1H5Q NAP 0.01114 0.41814 2.81124
122 3Q3C NAD 0.007726 0.41758 2.81124
123 4GKV NAD 0.01349 0.41754 2.81124
124 3RJ5 NAD 0.01639 0.41749 2.81124
125 5UAV TFB 0.01596 0.41606 2.81124
126 5UAV NDP 0.01596 0.41606 2.81124
127 5KOK S9T 0.000003187 0.4157 2.81124
128 1LLU NAD 0.02262 0.40648 2.81124
129 5KOK R9T 0.00001292 0.40356 2.81124
130 3BXO SAM 0.0000006688 0.58586 2.92887
131 1G60 SAM 0.000005674 0.55568 3.07692
132 5N53 8NB 0.003492 0.43911 3.07692
133 1L1E SAH 0.0000002179 0.62397 3.21285
134 4LWP SAH 0.0000003837 0.60668 3.21285
135 5DX0 SFG 0.0000009146 0.60506 3.21285
136 5DWQ SFG 0.000000911 0.60279 3.21285
137 5E8J SAH 0.0000003963 0.59609 3.21285
138 5E9W SAH 0.0000004586 0.58286 3.21285
139 3PFG TLO 0.00001323 0.57343 3.21285
140 1KYZ SAH 0.000003331 0.5636 3.21285
141 5CUQ NSC 0.00001433 0.55964 3.21285
142 2OBF F83 0.00003622 0.55421 3.21285
143 3PT9 SAH 0.000007072 0.5486 3.21285
144 5JGL SAM 0.00001176 0.53573 3.21285
145 4TQG NDP 0.00003884 0.53358 3.21285
146 3ELW SAM 0.0001088 0.52912 3.21285
147 3ELW GP3 0.0001149 0.52912 3.21285
148 1KYZ FER 0.00005276 0.52543 3.21285
149 3EVG SAH 0.0000314 0.51888 3.21285
150 3AYI HCI 0.0004055 0.51161 3.21285
151 3AYI FAD 0.0003894 0.51161 3.21285
152 3PFG SAM 0.001024 0.51058 3.21285
153 2P41 SAH 0.00005025 0.50951 3.21285
154 3EVF GTA 0.00028 0.5063 3.21285
155 3EVF SAH 0.0002348 0.5063 3.21285
156 2YG3 FAD 0.0003011 0.50591 3.21285
157 3S5W FAD 0.0001902 0.50367 3.21285
158 1N4W FAD 0.0006553 0.49236 3.21285
159 1UDB NAD 0.001253 0.4848 3.21285
160 3G5S FAD 0.0008738 0.47945 3.21285
161 2YY7 NAD 0.000622 0.4788 3.21285
162 2AQJ FAD 0.002806 0.47237 3.21285
163 2AQJ TRP 0.002715 0.47237 3.21285
164 4HXY NDP 0.001064 0.46753 3.21285
165 5JJR SAH 0.0000665 0.46703 3.21285
166 2XVE FAD 0.004427 0.46281 3.21285
167 2XVF FAD 0.001978 0.46194 3.21285
168 1UP7 NAD 0.001649 0.4509 3.21285
169 1T26 NAI 0.004497 0.44942 3.21285
170 4W6Z 8ID 0.003611 0.44792 3.21285
171 1KYQ NAD 0.00168 0.43742 3.21285
172 2UYQ SAM 0.0001258 0.42946 3.21285
173 2YYY NAP 0.006402 0.42721 3.21285
174 2IV2 MGD 0.009698 0.42676 3.21285
175 3VZS NAP 0.01765 0.42129 3.21285
176 2V3V MGD 0.04022 0.4183 3.21285
177 1J49 NAD 0.01061 0.41665 3.21285
178 2B4R AES 0.01226 0.41489 3.21285
179 3F3E LEU 0.01847 0.41392 3.21285
180 2B4R NAD 0.01501 0.41183 3.21285
181 3B1F NAD 0.01457 0.40146 3.21285
182 1XSE NDP 0.0005064 0.49468 3.38983
183 4BQS ADP 0.00993 0.40597 3.40909
184 1Q0S SAH 0.0000111 0.55162 3.4749
185 5OFW 9TW 0.00879 0.41654 3.58744
186 4R6W PC 0.000001474 0.63541 3.61446
187 4R6W SAH 0.0000003925 0.63541 3.61446
188 3BGD SAH 0.000001129 0.59596 3.61446
189 3BGD PM6 0.000001759 0.59596 3.61446
190 3S1S SAH 0.00001271 0.54665 3.61446
191 4USQ FAD 0.000054 0.53477 3.61446
192 3UOY NAP 0.000608 0.51202 3.61446
193 1YBH FAD 0.0002356 0.51002 3.61446
194 1QO8 FAD 0.0002827 0.50957 3.61446
195 3VSE SAH 0.0000234 0.50612 3.61446
196 1FL2 FAD 0.0003819 0.49961 3.61446
197 4DMG SAM 0.0001063 0.49284 3.61446
198 3GDN HBX 0.0008847 0.4925 3.61446
199 3GDN FAD 0.0006201 0.4925 3.61446
200 5MBX FAD 0.001331 0.48598 3.61446
201 5MBX SP5 0.001331 0.48598 3.61446
202 4RDI ATP 0.000165 0.48582 3.61446
203 1GY8 NAD 0.0006087 0.47925 3.61446
204 4RDH AMP 0.0001022 0.47802 3.61446
205 1MV8 NAD 0.0005441 0.4754 3.61446
206 4BJZ P3A 0.003896 0.47159 3.61446
207 4UCI SAM 0.0004594 0.46758 3.61446
208 1AE1 NAP 0.001675 0.46065 3.61446
209 3FG2 FAD 0.002062 0.45624 3.61446
210 1J0X NAD 0.003756 0.45429 3.61446
211 1DJN ADP 0.00122 0.45367 3.61446
212 2RGH FAD 0.003729 0.45151 3.61446
213 5XLX SAH 0.001235 0.44568 3.61446
214 2AG8 NAP 0.001915 0.44088 3.61446
215 3OND ADN 0.00848 0.43995 3.61446
216 3OND NAD 0.00848 0.43995 3.61446
217 3A4V NAD 0.005487 0.43897 3.61446
218 3MCT SAH 0.0144 0.42661 3.61446
219 2WPB ZZI 0.01009 0.41467 3.61446
220 1A5Z NAD 0.009355 0.4105 3.61446
221 1J5P NAD 0.01614 0.40657 3.61446
222 4BWL MN9 0.01562 0.40603 3.61446
223 3JWH SAH 0.00000005154 0.62239 3.68664
224 2BD0 NAP 0.0003606 0.4917 3.68852
225 1EDO NAP 0.0005558 0.48259 3.68852
226 2CUL FAD 0.0005927 0.48526 3.87931
227 4PLG NAI 0.003143 0.45201 3.89222
228 3H2B SAH 0.0000003244 0.61305 3.94089
229 1I1N SAH 0.000001221 0.60353 3.9823
230 5FA5 MTA 0.000003882 0.53786 4.01606
231 3A25 SAM 0.00001248 0.53728 4.01606
232 2DPM SAM 0.00002072 0.53447 4.01606
233 4USR FAD 0.0001546 0.51102 4.01606
234 1G55 SAH 0.000002874 0.5092 4.01606
235 1RSG FAD 0.0004364 0.50014 4.01606
236 3IHG FAD 0.0001972 0.49975 4.01606
237 4D04 NAP 0.0009607 0.49875 4.01606
238 1NAA ABL 0.0007624 0.49756 4.01606
239 1NAA 6FA 0.0005162 0.49756 4.01606
240 1YY5 FAD 0.0005499 0.49723 4.01606
241 2BRY FAD 0.0003074 0.4965 4.01606
242 1BZL FAD 0.002186 0.49592 4.01606
243 5F2K SAH 0.0009047 0.47232 4.01606
244 5F2K OCA 0.0009047 0.47232 4.01606
245 4FC7 COA 0.002144 0.46554 4.01606
246 4FC7 NAP 0.002144 0.46554 4.01606
247 5D4V SAH 0.001011 0.45567 4.01606
248 1X14 NAD 0.0008206 0.45161 4.01606
249 3VYW SAM 0.0002708 0.43295 4.01606
250 2CFC NAD 0.005188 0.4316 4.01606
251 1YKJ FAD 0.02073 0.42911 4.01606
252 1W8D NAP 0.006414 0.4214 4.01606
253 1W73 NAP 0.007003 0.4196 4.01606
254 1NFQ NAI 0.01123 0.41916 4.01606
255 4J1Q NDP 0.009654 0.41729 4.01606
256 1CF2 NAP 0.01404 0.40813 4.01606
257 1GOJ ADP 0.02018 0.4041 4.01606
258 4QED NAP 0.01339 0.41303 4.03226
259 2JAH NDP 0.002628 0.44854 4.04858
260 2AG5 NAD 0.005513 0.43167 4.06504
261 4KRG SAH 0.0000004346 0.60106 4.29185
262 1HDO NAP 0.02103 0.40804 4.36893
263 4KRI SAH 0.00000002991 0.664 4.41767
264 4AZW SAM 0.0000002696 0.61676 4.41767
265 4AZT SAM 0.000000246 0.61554 4.41767
266 1FP1 SAH 0.000000363 0.6013 4.41767
267 4EIP FAD 0.0001415 0.52688 4.41767
268 3LAD FAD 0.0002317 0.51389 4.41767
269 4EIP K2C 0.0003497 0.50918 4.41767
270 4CNK FAD 0.0004126 0.49675 4.41767
271 2VHW NAI 0.0004342 0.49317 4.41767
272 1PN0 IPH 0.000912 0.49002 4.41767
273 1PN0 FAD 0.0008742 0.49002 4.41767
274 3T31 FAD 0.001445 0.48415 4.41767
275 3T31 DCQ 0.001552 0.48415 4.41767
276 1U7T TDT 0.0009147 0.48299 4.41767
277 3GMB FAD 0.000735 0.47939 4.41767
278 5ITV NAI 0.001064 0.46753 4.41767
279 3NYC FAD 0.003966 0.45924 4.41767
280 1H2B NAJ 0.00273 0.45031 4.41767
281 4UP3 FAD 0.007872 0.43532 4.41767
282 1MUU NAD 0.003675 0.4344 4.41767
283 1SC6 NAD 0.006658 0.43022 4.41767
284 3RFV 15L 0.004985 0.42961 4.41767
285 2CVZ NDP 0.005317 0.42828 4.41767
286 1DMR PGD 0.03381 0.42019 4.41767
287 1WP4 NDP 0.009001 0.41875 4.41767
288 3RFV NAI 0.00908 0.41857 4.41767
289 1VJT NAD 0.006202 0.41534 4.41767
290 2E7Z MGD 0.02143 0.40869 4.41767
291 3MJE NDP 0.02073 0.40382 4.41767
292 2BJK NAD 0.02624 0.40329 4.41767
293 5A7Y SAH 0.01469 0.40203 4.41767
294 2AOT SAH 0.0000002871 0.60592 4.45205
295 1JQD HSM 0.000005758 0.44731 4.45205
296 1JQD SAH 0.000001648 0.44479 4.45205
297 5ULP KB1 0.00001831 0.44653 4.47761
298 2YX1 SFG 0.000004222 0.54984 4.81928
299 1NW5 SAM 0.00002106 0.52938 4.81928
300 3CH6 NAP 0.0003856 0.5186 4.81928
301 3CH6 311 0.0003856 0.5186 4.81928
302 2GV8 FAD 0.0002388 0.50324 4.81928
303 1VQW FAD 0.0002529 0.50062 4.81928
304 2GVC FAD 0.0002595 0.50008 4.81928
305 1FEC FAD 0.0007265 0.49313 4.81928
306 2DTX BMA 0.0005771 0.49071 4.81928
307 3LXD FAD 0.0004604 0.49064 4.81928
308 4G74 FAD 0.0007815 0.48062 4.81928
309 4G74 UQ5 0.00134 0.48062 4.81928
310 1Y8Q ATP 0.000009441 0.46212 4.81928
311 2AE2 NAP 0.002515 0.46004 4.81928
312 3OID NDP 0.001798 0.45914 4.81928
313 2IVF MGD 0.002522 0.45784 4.81928
314 1OC2 NAD 0.00496 0.45737 4.81928
315 1VDC FAD 0.007399 0.44297 4.81928
316 1BXG NAD 0.002632 0.44282 4.81928
317 2JHP SAH 0.004888 0.41622 4.81928
318 1X1T NAD 0.02368 0.40442 4.81928
319 1R18 SAH 0.000003526 0.57036 4.84582
320 3NUG NAD 0.003138 0.44481 4.8583
321 3WV8 ATP 0.0000481 0.51283 5.04587
322 3E1T FAD 0.0009249 0.48485 5.07812
323 3GWZ SAH 0.000001697 0.56765 5.14905
324 3GXO SAH 0.000005645 0.54729 5.14905
325 2CVQ NDP 0.02064 0.40268 5.19878
326 5BW4 SAM 0.000000008808 0.67829 5.22088
327 1Z3C SA8 0.0000001435 0.65242 5.22088
328 2ZIF SAM 0.000003512 0.5653 5.22088
329 5T67 SAH 0.00002229 0.56216 5.22088
330 5T67 JHZ 0.00002968 0.56216 5.22088
331 1I9G SAM 0.00001704 0.53608 5.22088
332 3TKA SAM 0.00003657 0.52069 5.22088
333 2V3A FAD 0.0002611 0.50658 5.22088
334 4AP3 NAP 0.000678 0.50509 5.22088
335 2C7G ODP 0.0008419 0.4962 5.22088
336 2C7G FAD 0.0008739 0.4962 5.22088
337 1KNR FAD 0.0009346 0.48144 5.22088
338 1ZBQ NAD 0.001546 0.46104 5.22088
339 5FJN BE2 0.003255 0.45928 5.22088
340 5FJN FAD 0.002858 0.45928 5.22088
341 4D79 ATP 0.000129 0.45636 5.22088
342 1KOL NAD 0.003179 0.45065 5.22088
343 1OAA OAA 0.006119 0.44364 5.22088
344 4J7U YTZ 0.008124 0.43653 5.22088
345 4J7U NAP 0.008124 0.43653 5.22088
346 1V8B NAD 0.0107 0.42466 5.22088
347 3C2O NTM 0.008327 0.41898 5.22088
348 1LDN NAD 0.01531 0.41141 5.22088
349 1PFY MSP 0.01032 0.41164 5.26316
350 5FUI APY 0.006088 0.44196 5.30303
351 1NM5 NAD 0.03171 0.41358 5.41872
352 1NM5 NAP 0.03073 0.41358 5.41872
353 4RPL 3UC 0.0006242 0.51143 5.51378
354 4RPL FAD 0.0005733 0.51117 5.51378
355 4NTD FAD 0.0002274 0.50955 5.58824
356 5X62 SAH 0.00000006353 0.5988 5.62249
357 3GD4 FAD 0.00008685 0.54961 5.62249
358 3GD4 NAD 0.0001415 0.54961 5.62249
359 3KLJ FAD 0.00004105 0.53905 5.62249
360 2HQM FAD 0.00009757 0.53268 5.62249
361 4BV6 FAD 0.0002018 0.51574 5.62249
362 4YNU FAD 0.0002656 0.51312 5.62249
363 4YNU LGC 0.0003201 0.51312 5.62249
364 5G3U FDA 0.0001943 0.51293 5.62249
365 3GCZ SAM 0.00005459 0.50786 5.62249
366 3HDY GDU 0.0008465 0.50161 5.62249
367 3HDY FDA 0.0008188 0.50161 5.62249
368 1I8T FAD 0.0003526 0.50133 5.62249
369 3CGD NAD 0.001407 0.49865 5.62249
370 3CGD COA 0.001407 0.49865 5.62249
371 3CGD FAD 0.001407 0.49865 5.62249
372 3HDY FAD 0.001113 0.49468 5.62249
373 4DSG UDP 0.0015 0.48721 5.62249
374 4J56 FAD 0.0009024 0.4864 5.62249
375 4DSG FAD 0.002071 0.48137 5.62249
376 5G3U ITW 0.001495 0.47537 5.62249
377 1RYI FAD 0.001582 0.47112 5.62249
378 1U1I NAD 0.003096 0.44887 5.62249
379 2FZW NAD 0.008357 0.43682 5.62249
380 2G5C NAD 0.005096 0.43331 5.62249
381 4E5N NAD 0.007365 0.42686 5.62249
382 3EYA FAD 0.009522 0.42608 5.62249
383 3GGO NAI 0.0337 0.40449 5.62249
384 3GGO ENO 0.0337 0.40449 5.62249
385 4XFR CIT 0.02121 0.40164 5.62249
386 4RL4 PPV 0.00762 0.42102 5.66038
387 1HDR NAD 0.0207 0.42095 5.7377
388 3B20 NAD 0.01792 0.40168 5.8997
389 2EJU SAH 0.0000003072 0.61111 6.0241
390 5E72 SAM 0.0000007392 0.60202 6.0241
391 4OPC FDA 0.0009511 0.51601 6.0241
392 4OPC PGT 0.001098 0.51601 6.0241
393 5JCM ISD 0.0005987 0.51093 6.0241
394 5JCM NAD 0.0005987 0.51093 6.0241
395 5JCM FAD 0.0005794 0.51093 6.0241
396 3A27 SAM 0.00000797 0.50549 6.0241
397 2EWM NAD 0.0004218 0.48695 6.0241
398 1YQZ FAD 0.00259 0.47417 6.0241
399 1KEW NAD 0.006552 0.44809 6.0241
400 5XDT MB3 0.003683 0.44397 6.0241
401 1SOW NAD 0.004518 0.43841 6.0241
402 5XDT GDP 0.003492 0.43698 6.0241
403 1M2K APR 0.004923 0.4313 6.0241
404 1U3U BNF 0.01845 0.4186 6.0241
405 4O0L NDP 0.01149 0.41749 6.0241
406 4JWJ SAH 0.01183 0.4073 6.0241
407 1TMO 2MD 0.02907 0.40409 6.0241
408 1KEW TYD 0.04727 0.40316 6.0241
409 1PNO NAP 0.01262 0.41427 6.11111
410 5K6A NAP 0.02436 0.4004 6.25
411 3C6K SPD 0.001448 0.46746 6.29921
412 3C6K MTA 0.001448 0.46746 6.29921
413 2OOR TXP 0.01039 0.41575 6.32184
414 4GQB 0XU 0.000001491 0.5927 6.4257
415 1XDS SAM 0.0000005868 0.58841 6.4257
416 4EUE NAI 0.0001847 0.50579 6.4257
417 4BLW AMP 0.0003089 0.49778 6.4257
418 1D4D FAD 0.0006128 0.49382 6.4257
419 4BLW SAH 0.0003489 0.48458 6.4257
420 3QVP FAD 0.001203 0.47912 6.4257
421 4N49 SAM 0.0003686 0.47411 6.4257
422 1O97 AMP 0.002895 0.46942 6.4257
423 1I2B NAD 0.002805 0.46935 6.4257
424 4AT0 FAD 0.003162 0.46171 6.4257
425 1O94 ADP 0.001753 0.44799 6.4257
426 1I2B USQ 0.04896 0.42945 6.4257
427 1I2B UPG 0.04896 0.42945 6.4257
428 5BXV MGP 0.03555 0.40274 6.81818
429 2BZG SAH 0.0000009052 0.58957 6.82731
430 4HA6 FAD 0.0001489 0.52464 6.82731
431 3SQP FAD 0.001591 0.52279 6.82731
432 2WPF FAD 0.001532 0.50378 6.82731
433 4TM3 FAD 0.001059 0.50007 6.82731
434 4REP FAD 0.0004344 0.49683 6.82731
435 2WPF WPF 0.002909 0.49014 6.82731
436 4MIG G3F 0.00219 0.47069 6.82731
437 1XKQ NDP 0.001173 0.46818 6.82731
438 2GDZ NAD 0.003375 0.44195 6.82731
439 3RIY NAD 0.005685 0.43102 6.82731
440 3Q9T FAY 0.01261 0.42316 6.82731
441 3L4S NAD 0.02198 0.40491 6.82731
442 3L4S 3PG 0.02315 0.40491 6.82731
443 1NVM NAD 0.02317 0.40264 6.82731
444 3OU2 SAH 0.000007504 0.45175 6.88073
445 1VE3 SAM 0.000001807 0.5758 7.04846
446 3T7S SAM 0.00000001722 0.66855 7.22892
447 4II2 ATP 0.00003416 0.52206 7.22892
448 1GTE FAD 0.003026 0.47139 7.22892
449 5GT9 NAP 0.001367 0.46227 7.22892
450 1E5Q NDP 0.00193 0.45223 7.22892
451 1ZK4 NAP 0.00459 0.44279 7.22892
452 1SAY PYR 0.004343 0.44168 7.22892
453 1GR0 NAD 0.004793 0.43958 7.22892
454 1TDF FAD 0.01386 0.42828 7.22892
455 3WE0 FAD 0.01448 0.42478 7.22892
456 4NBW NAD 0.007615 0.42223 7.22892
457 3ICC NAP 0.02367 0.40333 7.22892
458 1XHL NDP 0.001258 0.46538 7.40741
459 4FN4 NAD 0.000477 0.48288 7.48031
460 4POO SAM 0.00006533 0.51534 7.5
461 4ZA2 NAD 0.00655 0.42673 7.50988
462 5M67 NAD 0.006881 0.4454 7.51566
463 5M67 ADE 0.007528 0.44341 7.51566
464 5M67 3D1 0.008477 0.44078 7.51566
465 3OZ2 FAD 0.0006811 0.48828 7.63052
466 5HJM MTA 0.00001312 0.48452 7.63052
467 2YVF FAD 0.005054 0.45982 7.63052
468 2YVF NAD 0.00521 0.45982 7.63052
469 2PXX SAH 0.0000003309 0.61265 7.90698
470 3P2E SAH 0.0000003692 0.61334 8
471 5GM1 SAH 0.0000003927 0.51384 8.03213
472 2GAG NAD 0.0001831 0.51292 8.03213
473 3RNM FAD 0.0002707 0.51162 8.03213
474 2RAB NAD 0.0006642 0.5093 8.03213
475 2RAB FAD 0.0003164 0.5093 8.03213
476 4DCM SAM 0.0000548 0.50256 8.03213
477 2Y6Q FAD 0.0002177 0.50233 8.03213
478 2Y6Q I7T 0.0004777 0.50233 8.03213
479 5EB4 FAD 0.0004165 0.4989 8.03213
480 2RGO FAD 0.0003939 0.49652 8.03213
481 3UCL CYH 0.001183 0.49547 8.03213
482 3UCL FAD 0.001183 0.49547 8.03213
483 3UCL NAP 0.001296 0.49547 8.03213
484 1E1M FAD 0.00107 0.49001 8.03213
485 1E1M NAP 0.00107 0.49001 8.03213
486 1E6E FAD 0.0005125 0.48963 8.03213
487 2VVM FAD 0.0006464 0.48941 8.03213
488 2VVL FAD 0.0006833 0.48931 8.03213
489 4K5S PM0 0.001108 0.48574 8.03213
490 4K5S FAD 0.0005114 0.48574 8.03213
491 2GAG FOA 0.0009823 0.48554 8.03213
492 2GAG FAD 0.0009823 0.48554 8.03213
493 2E5V FAD 0.001018 0.48276 8.03213
494 1SB8 UD2 0.001707 0.47878 8.03213
495 1SB8 NAD 0.001457 0.47878 8.03213
496 1PR9 NAP 0.001406 0.46436 8.03213
497 1LVL NAD 0.0000528 0.45593 8.03213
498 3D3W NAP 0.002303 0.45391 8.03213
499 2A92 NAI 0.002438 0.45143 8.03213
500 2Q28 ADP 0.00196 0.43848 8.03213
501 1ZMD NAI 0.0001092 0.42032 8.03213
502 3KO8 NAD 0.01827 0.40884 8.03213
503 1XCL SAH 0.0001139 0.51597 8.08511
504 1DJL NAP 0.01277 0.4176 8.21256
505 1UAY ADN 0.00005618 0.49924 8.26446
506 4A6D SAM 0.000001507 0.58226 8.43373
507 1ZGA SAH 0.000002323 0.56151 8.43373
508 4C3Y FAD 0.001148 0.47807 8.43373
509 4C3Y ANB 0.001542 0.47661 8.43373
510 3VPH OXM 0.002011 0.45925 8.43373
511 5UAO FAD 0.004661 0.44462 8.43373
512 2DFV NAD 0.002727 0.44358 8.43373
513 3VPH NAD 0.005636 0.43496 8.43373
514 4A91 GLU 0.01331 0.42529 8.43373
515 2Q2V NAD 0.02561 0.40275 8.43373
516 2VDV SAM 0.00000002203 0.65257 8.53659
517 3QV1 NAD 0.0178 0.40182 8.53659
518 1LSS NAD 0.00001981 0.53305 8.57143
519 1T57 FMN 0.006401 0.41822 8.73786
520 1JA9 NDP 0.001909 0.45658 8.75912
521 3G2O SAM 0.0000001458 0.57125 8.83534
522 5JAQ NAI 0.0006522 0.48808 8.83534
523 3ZV6 NAD 0.0007993 0.48591 8.83534
524 3ZV6 4HB 0.0008397 0.48591 8.83534
525 1PS9 FAD 0.001237 0.47645 8.83534
526 2Q1S NAI 0.002741 0.46117 8.83534
527 3SJ7 NDP 0.003066 0.44258 8.83534
528 1QAN SAH 0.00001277 0.54428 9.01639
529 2V3B FAD 0.0002797 0.50385 9.09091
530 3FPF MTA 0.000006179 0.58845 9.23695
531 3U4C NDP 0.00009071 0.51592 9.23695
532 5BUK FAD 0.001474 0.47568 9.23695
533 1IY8 NAD 0.0009151 0.47069 9.23695
534 4J4H NAI 0.003138 0.461 9.23695
535 4J4H 1J1 0.003138 0.461 9.23695
536 3WGT QSC 0.003508 0.46029 9.23695
537 3WGT FAD 0.003374 0.46029 9.23695
538 5FTW SAH 0.00008988 0.44686 9.23695
539 4JK3 NAD 0.002276 0.44583 9.23695
540 2ZAT NAP 0.008105 0.42358 9.23695
541 5THQ NDP 0.008661 0.42219 9.23695
542 3V1Y NAD 0.00714 0.42217 9.23695
543 2VPY MGD 0.04305 0.41291 9.23695
544 1WDK NAD 0.01017 0.4104 9.23695
545 1D4O NAP 0.009138 0.41705 9.23913
546 3GEG NAD 0.00004756 0.52758 9.31174
547 3FZG SAM 0.000002682 0.54412 9.5
548 1P1C SAH 0.0000133 0.54573 9.54774
549 2A14 SAH 0.000008928 0.55153 9.63855
550 1MO9 FAD 0.002525 0.48571 9.63855
551 1MO9 KPC 0.003608 0.478 9.63855
552 9LDT NAD 0.006575 0.42925 9.63855
553 9LDB NAD 0.007663 0.42603 9.63855
554 4X7Y SAH 0.01628 0.42044 9.63855
555 1SQF SAM 0.000002944 0.56606 10.0402
556 2Z3Y F2N 0.0001613 0.52289 10.0402
557 2WET FAD 0.001566 0.47133 10.0402
558 3ZNN FAD 0.003315 0.46714 10.0402
559 3ZNN 4WL 0.003315 0.46714 10.0402
560 5XVQ SAH 0.000009327 0.46415 10.0402
561 2PX8 SAH 0.001389 0.44333 10.0402
562 5GWX SAR 0.00002252 0.44065 10.0402
563 5GWX SAM 0.00002252 0.44065 10.0402
564 3OJO NAD 0.003038 0.43508 10.0402
565 1Z6Z NAP 0.006663 0.42769 10.0402
566 1Q0H FOM 0.03712 0.40563 10.0402
567 1Q0H NDP 0.03973 0.40563 10.0402
568 4CNG SAH 0.01716 0.40395 10.1961
569 4PNE SAH 0.000000139 0.63863 10.4418
570 4M52 FAD 0.0004945 0.49742 10.4418
571 2A8X FAD 0.001338 0.4768 10.4418
572 3NJ4 NAD 0.0219 0.44771 10.4418
573 2B9W FAD 0.007762 0.44733 10.4418
574 2XVM SAH 0.000005291 0.54543 10.5528
575 5XVK SAH 0.000005741 0.47027 10.5634
576 4PIO SAH 0.000003789 0.59113 10.8434
577 4PIO AVI 0.000003495 0.59113 10.8434
578 1ELI PYC 0.00003795 0.54801 10.8434
579 2O07 SPD 0.00002933 0.54119 10.8434
580 2O07 MTA 0.00002467 0.54119 10.8434
581 2DKH 3HB 0.0001416 0.52098 10.8434
582 2DKH FAD 0.00009653 0.52098 10.8434
583 3LKZ SFG 0.0001017 0.49782 10.8434
584 4OBW SAM 0.00001875 0.48921 10.8434
585 4XYM COA 0.0111 0.4288 10.8696
586 2F5Z FAD 0.0003744 0.50455 10.9375
587 3Q87 SAM 0.00002761 0.53085 11.1765
588 5E1M SAH 0.000001184 0.6158 11.2033
589 5E1M PRO PRO LYS ARG ILE ALA 0.000001184 0.6158 11.2033
590 2PWY SAH 0.0000002136 0.62988 11.245
591 5F8F SFG 0.000007153 0.52652 11.245
592 2CDU FAD 0.0003379 0.49853 11.245
593 4JNA FAD 0.0005414 0.49545 11.245
594 2CDU ADP 0.000181 0.48157 11.245
595 3CGB FAD 0.0008247 0.48069 11.245
596 1ORR NAD 0.0006956 0.47923 11.245
597 1C3V NDP 0.02385 0.40203 11.4286
598 1L3I SAH 0.000000786 0.61046 11.4583
599 5N5D SAM 0.00002984 0.5224 11.5044
600 1DL5 SAH 0.000007053 0.56515 11.6466
601 4J36 FAD 0.0001305 0.5146 11.6466
602 4J36 1HR 0.0002372 0.5145 11.6466
603 5J60 FAD 0.0009908 0.48018 11.6466
604 1P3D UMA 0.01692 0.40425 11.6466
605 1P31 EPU 0.01071 0.40252 11.6466
606 3DXY SAM 0.00000006551 0.61903 11.9266
607 4K26 NDP 0.0003525 0.49072 12.0482
608 4K26 SFF 0.0006356 0.48863 12.0482
609 2Q46 NAP 0.001044 0.46503 12.0482
610 1ZH8 NAP 0.0128 0.41141 12.0482
611 3Q9N COA 0.00802 0.4225 12.0567
612 5FA8 SAM 0.000002886 0.48344 12.4224
613 4EMJ FAD 0.0001418 0.52095 12.4498
614 4EMI NAD 0.0005173 0.51119 12.4498
615 4EMI FAD 0.0002107 0.51119 12.4498
616 3TKY SAH 0.000001424 0.58339 12.8514
617 1JNR FAD 0.001379 0.49727 12.8514
618 5MPT SAH 0.00001457 0.49284 12.8514
619 2R4J 13P 0.0009191 0.49254 12.8514
620 2R4J FAD 0.0009191 0.49254 12.8514
621 4GUT FAD 0.001241 0.48138 12.8514
622 4GUS FAD 0.001156 0.481 12.8514
623 4HSU FAD 0.001165 0.48082 12.8514
624 4FWE FAD 0.001557 0.4735 12.8514
625 2RGJ FAD 0.001109 0.46937 12.8514
626 2BGM NAJ 0.004562 0.43144 12.8514
627 2EXX NAP 0.007359 0.43046 12.8514
628 2WSB NAD 0.001949 0.46554 12.9921
629 1QZZ SAM 0.000002176 0.56279 13.253
630 4CQM NAP 0.002562 0.44772 13.253
631 3EWP APR 0.003366 0.43773 13.253
632 3MQ2 SAH 0.00000117 0.58143 13.3028
633 1JG3 ADN 0.0000009004 0.54037 13.617
634 4KIB SAH 0.0000005305 0.59711 13.6546
635 5LOG SAH 0.0001366 0.49191 14.1631
636 1ZEM NAD 0.0005523 0.47509 14.5038
637 3QWI CUE 0.0008829 0.48376 14.8594
638 3QWI NAP 0.0005258 0.48376 14.8594
639 3LST SAH 0.0000008589 0.58096 15.261
640 5MGZ SAH 0.00000004309 0.57673 15.678
641 3CTY FAD 0.0004268 0.50276 16.8675
642 3AD8 NAD 0.0001078 0.52011 17.2414
643 3AD8 FAD 0.001657 0.48853 17.2414
644 3HVJ 705 0.000003682 0.59658 17.6471
645 1TPY SAH 0.000000219 0.62667 17.6707
646 4XUC 43G 0.000008151 0.57488 17.8899
647 4XUC SAM 0.000008151 0.57488 17.8899
648 4MP8 NAD 0.01559 0.41759 18.8755
649 4YMH SAH 0.000005585 0.49404 20.0803
650 4ITU NAI 0.0007794 0.47683 20.4461
651 4ITU 1HS 0.001276 0.47683 20.4461
652 5DXA SFG 0.000001249 0.49431 21.0526
653 5DX8 SFG 0.000001606 0.49082 21.0526
654 4NEC SAH 0.0000004817 0.5765 21.6867
655 2YVJ FAD 0.003427 0.45015 23.8532
656 2YVJ NAI 0.002792 0.42941 23.8532
657 5DX1 SFG 0.000001021 0.6028 26.3158
Pocket No.: 3; Query (leader) PDB : 3G89; Ligand: SAM; Similar sites found: 6
This union binding pocket(no: 3) in the query (biounit: 3g89.bio2) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2C31 TZD 0.02596 0.4285 3.69718
2 2C31 ADP 0.02536 0.4285 3.69718
3 4O33 TZN 0.04487 0.40061 5.62249
4 4O33 3PG 0.04487 0.40061 5.62249
5 2CDC XYP 0.04877 0.41058 6.4257
6 4JWH SAH 0.01394 0.40074 7.22892
Pocket No.: 4; Query (leader) PDB : 3G89; Ligand: AMP; Similar sites found: 3
This union binding pocket(no: 4) in the query (biounit: 3g89.bio2) has 5 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2J9D AMP 0.01138 0.43463 5.04202
2 2J9D ADP 0.0106 0.41 5.04202
3 3OIX FMN 0.002284 0.4778 9.23695
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